BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780897|ref|YP_003065310.1| trigger factor [Candidatus
Liberibacter asiaticus str. psy62]
(473 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|209964557|ref|YP_002297472.1| trigger factor [Rhodospirillum centenum SW]
gi|226738688|sp|B6ISY8|TIG_RHOCS RecName: Full=Trigger factor; Short=TF
gi|209958023|gb|ACI98659.1| trigger factor TF, putative [Rhodospirillum centenum SW]
Length = 448
Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 124/457 (27%), Positives = 235/457 (51%), Gaps = 11/457 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ E ++GL+RE V +P++ + R+ +I I GFRPGKVP++ +K YG+
Sbjct: 1 MQITETSADGLRREFKVTVPADEIETRVANRLSEIGKTIKIPGFRPGKVPMALLKQRYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ E +++ + + + + + R A++P + + + E DL+ ++ ++
Sbjct: 61 SVMGEVLEQAVNDGSAKAVEEHKLRPALQPKVEVTK---------FEAGSDLEFSMAVEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP E + + V + + EV + +D + IA N E ++ GD V +D+
Sbjct: 112 LPDFEPADMAAIAVEKPVVEVADAMVDDGLKRIAANRKTSAPLEAERPAQSGDIVVIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD ++ + +GS + LVG G+ + + FPE++ +L+GK
Sbjct: 172 GSVDGEKRPGMKGEDHELELGSGSFIPGFEDQLVGAAKGEHRTVTVTFPENYHAAELSGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K++ P ++ D A GF+ + MR ++++ + R + KRQ+L
Sbjct: 232 EAVFEVDVKDIRVPKAAEIDEDFAKSFGFDDLAGMRDAIRERMQADYASMSRMRAKRQLL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + F VP +V+ E++ I ++++ E+ ++ + +E Y +A+RRV
Sbjct: 292 DRLAETHDFPVPTGMVDIEFDQIWRRLQQELKDGEADPEDKEKDEEGLKAEYRAIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G +NNI VT +E+ A+ + R+PG E+++ D F+ P A+ LRAPIFE
Sbjct: 352 RLGLLLSEVGRRNNITVTRDELGQAVVAEAQRYPGQERQVFDFFRNNPQAVEGLRAPIFE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
DKV+D IL V++ +R V+ + L + E
Sbjct: 412 DKVVDFILGQVKLTERTVSVEDLMRDPEEDEGPTAAA 448
>gi|328543680|ref|YP_004303789.1| Trigger factor [polymorphum gilvum SL003B-26A1]
gi|326413424|gb|ADZ70487.1| Trigger factor [Polymorphum gilvum SL003B-26A1]
Length = 454
Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats.
Identities = 162/456 (35%), Positives = 273/456 (59%), Gaps = 5/456 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLKREL V+IP+ L ++D++SK I GFRPGKVP +H+K LYG+
Sbjct: 1 MQVTETLSEGLKRELKVVIPATDLASRLESYLDDLKSKVRINGFRPGKVPTAHLKRLYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++E ++ +I+E + + R ER A++P I + + D +++G+ DL ++SYD+
Sbjct: 61 QAMAEILNTMIQETSQKAIEDRSERPALQPDIDLPD---DEAEAILDGSADLAFKISYDL 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYT 178
LP+ E+ F +++ + + E+ + + Q+ IA NN FE K + D+VT+ Y
Sbjct: 118 LPEFEVVDFSGIEIERPVVEISDAGVMEQVEAIAANNRPFESKGEGAVAEAGDRVTMSYL 177
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E + +N Q ++GS + ++G+K G++K I FP+D+ LAGK
Sbjct: 178 GKIDGEPFEGGADENGQLVLGSGQFIPGFEDGILGMKAGEEKVITVKFPDDYPAPHLAGK 237
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V +P + +++D A LG ES ++ + +I+ L RQ+VKRQ+L
Sbjct: 238 EATFDIVLKDVAAPGELKLDDDFAKSLGLESLDQLKDIVRGQIESQFGALTRQRVKRQLL 297
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + Y+FD+P L+E E+ I +V +M + + ++ + +E Y +A+RRV
Sbjct: 298 DKLDEVYSFDLPGKLLETEFQNIWNQVEMDMQRSGKTFEDEGTTEEAARSDYRKIAERRV 357
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IGEKNNI+VT+EE+Q ALY ++ +FPG E+++ + ++ P ALA LRAPI+E
Sbjct: 358 RLGLVLSEIGEKNNIQVTDEEVQRALYDRVRQFPGQERQVFEFYKSNPQALASLRAPIYE 417
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLL 454
+KV+D+IL+ ++ D+ VT ++L ++E E
Sbjct: 418 EKVVDYILELAKVTDKTVTKEELEKLAAEDEDEATA 453
>gi|144899459|emb|CAM76323.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Magnetospirillum gryphiswaldense MSR-1]
Length = 462
Score = 293 bits (748), Expect = 6e-77, Method: Composition-based stats.
Identities = 135/471 (28%), Positives = 247/471 (52%), Gaps = 9/471 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E ++GLKRE V++P+++L +R+ +I + GFRPGKVP+ ++ Y
Sbjct: 1 MQVTETNADGLKREFKVVVPASQLQTRTQDRLAEIARTVKLPGFRPGKVPMKIVQQKYTA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I+ E +++ + + ++++R+ R A +P + I DL+ ++ +I
Sbjct: 61 AIMGEVLEQAVNDGTHSVITERNLRPAAQPKVEI---------SSYAEGADLEFTVALEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+I F + + ++ E+ +EI+ + IA N + E E S GD V +D+
Sbjct: 112 LPEITPMDFSTISLEREKAEIPAEEIEETLKNIADRNESTETVERASASGDVVVIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D V + + +GS + LVG GD + FPE + +LAGK
Sbjct: 172 QDGVAFPGGTAEGYALKLGSNTFIPGFEDQLVGKSAGDTATVTVTFPEGYGNAELAGKPA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV + +P ++++LA ++G +S A++G S++I + + R KVKR +LD
Sbjct: 232 EFDVTVKEVKAAVPAAIDDELAKKVGLDSLDALKGAISEEIGRELNAIGRNKVKRALLDA 291
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
++ + F VP S+VE E+ I +++ + + + D+ Y LA+RRV
Sbjct: 292 LAAGHDFQVPASMVEQEFETIWKQLETDREAGRLDPSDEGKDDDTLKAEYKTLAERRVRL 351
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G++L +G+KNN+ VT++++ AL ++ R+PG E + +++ P+AL LRAPIFE+K
Sbjct: 352 GLLLAEVGQKNNVTVTQDDLNKALIEEARRYPGQEHMVFQYYKGNPDALNSLRAPIFEEK 411
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+D IL+ ++ D+ V+ +L + E+ K + +E
Sbjct: 412 VVDFILELAKVTDKPVSAAELRKDPDEAEATDEAKPKKKAAAKKKAADTAE 462
>gi|194595691|gb|ACF77134.1| trigger factor [Azospirillum brasilense]
Length = 444
Score = 289 bits (738), Expect = 9e-76, Method: Composition-based stats.
Identities = 138/452 (30%), Positives = 242/452 (53%), Gaps = 12/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E ++GLKRE V+I + + R+E++R + GFRPGKVP++ IK YG
Sbjct: 1 MNITETSADGLKREYKVVISAQDIEQKVQGRLEELRRTVQLPGFRPGKVPVAVIKQRYGG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L+E +++ I + + L++R R AM+P I + + E DL + ++
Sbjct: 61 SVLAEALEDAIADSSRQALNERGLRIAMQPKINVEKY---------EDGGDLSYTMGVEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
LP IE L++ + + V++ +D + +A + ++ +E GD +D+
Sbjct: 112 LPDIEPGDLSGLELEKPVATVEDSAVDEALTRLASAHSVQAPVTEDRAAEKGDIAVIDFA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD L K+ +G+ + LVG K G+ + ++ FP D+ L G
Sbjct: 172 GSVDGEALPGMDGKDYPLELGANQFVPGFEDQLVGAKAGEHRTVKVTFPADYPHDRLKGA 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+KE+ +P VN+DLA G ES +R +IK + R +VKRQ+L
Sbjct: 232 DTVFEVDVKELRKNVPAEVNDDLAKEFGMESLEKLREAVGDRIKGEYANVSRLRVKRQLL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ ++F+VP +V+ E+ GI Q+++ E+ + ++ +EE Y +A+RRV
Sbjct: 292 DKLAEAHSFEVPPGMVDVEFEGIWQRLQQELQN-GTAGEDAGKPEEELKTEYRGIAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG +N+I+VT++E+ AL + RFPG E+++ + F++ AL LRAPIFE
Sbjct: 351 RLGLLLSEIGRRNDIQVTQDEINRALIAEARRFPGQERQVFEFFKQNREALENLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D+IL ++ ++ V+ ++L + E +
Sbjct: 411 DKVVDYILDQAKVSEKPVSAEELMKDPDEEAE 442
>gi|12230737|sp|Q9X6W7|TIG_AZOBR RecName: Full=Trigger factor; Short=TF
gi|5002356|gb|AAD37434.1|AF150957_1 trigger factor [Azospirillum brasilense]
Length = 444
Score = 288 bits (736), Expect = 1e-75, Method: Composition-based stats.
Identities = 134/452 (29%), Positives = 237/452 (52%), Gaps = 12/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E ++GLKRE V+I + + R+E++R + GFRPGKVP++ IK YG
Sbjct: 1 MNITETSADGLKREYKVVISAQDIEQKVQGRLEELRRTVQLPGFRPGKVPVAVIKQRYGG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L+E +++ I + + L++R R AM+P I + + E DL + ++
Sbjct: 61 SVLAEALEDAIADSSRQALNERGLRIAMQPKINVEKY---------EDGGDLSYTMGVEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
LP IE L++ + + V++ +D + +A + ++ +E GD +D
Sbjct: 112 LPDIEPGDLSGLELEKPVATVEDSAVDEALTRLASAHSVQAPVTEDRAAEKGDIAVIDSP 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V L K+ +G+ + LVG K G+ + ++ FP D+ L G
Sbjct: 172 VRSTGEALPGMDGKDYPLELGANQFVPGFEDQLVGAKAGEHRTVKVTFPADYPHDRLKGA 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+KE+ +P VN+DLA G ES +R + + V +VKRQ+L
Sbjct: 232 DTVFEVDVKELRKNVPAEVNDDLAKEFGMESLEKLREAVGRPHQGRIRQRVALRVKRQLL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ ++F+VP +V+ E+ GI Q+++ E+ + ++ +EE Y +A+RRV
Sbjct: 292 DKLAEAHSFEVPPGMVDVEFEGIWQRLQQELQN-GTAGEDAGKPEEELKTEYRGIAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG +N+I+VT++E+ AL + RFPG E+++ + F++ AL LRAPIFE
Sbjct: 351 RLGLLLSEIGRRNDIQVTQDEINRALIAEARRFPGQERQVFEFFKQNREALENLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D+IL ++ ++ V+ ++L + E +
Sbjct: 411 DKVVDYILDQAKVSEKPVSAEELMKDPDEEAE 442
>gi|258542727|ref|YP_003188160.1| trigger factor [Acetobacter pasteurianus IFO 3283-01]
gi|256633805|dbj|BAH99780.1| peptidyl-prolyl cis-trans isomerase trigger factor [Acetobacter
pasteurianus IFO 3283-01]
gi|256636864|dbj|BAI02833.1| peptidyl-prolyl cis-trans isomerase trigger factor [Acetobacter
pasteurianus IFO 3283-03]
gi|256639917|dbj|BAI05879.1| peptidyl-prolyl cis-trans isomerase trigger factor [Acetobacter
pasteurianus IFO 3283-07]
gi|256642973|dbj|BAI08928.1| peptidyl-prolyl cis-trans isomerase trigger factor [Acetobacter
pasteurianus IFO 3283-22]
gi|256646028|dbj|BAI11976.1| peptidyl-prolyl cis-trans isomerase trigger factor [Acetobacter
pasteurianus IFO 3283-26]
gi|256649081|dbj|BAI15022.1| peptidyl-prolyl cis-trans isomerase trigger factor [Acetobacter
pasteurianus IFO 3283-32]
gi|256652068|dbj|BAI18002.1| peptidyl-prolyl cis-trans isomerase trigger factor [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256655125|dbj|BAI21052.1| peptidyl-prolyl cis-trans isomerase trigger factor [Acetobacter
pasteurianus IFO 3283-12]
Length = 444
Score = 288 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 140/443 (31%), Positives = 249/443 (56%), Gaps = 9/443 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLKR V +P+ + + R++++ + N+ GFRPGKVP+S K YG+
Sbjct: 1 MQVTETLSEGLKRGFTVTVPAAEIASKRDARLKEVAANLNLPGFRPGKVPVSLAKQRYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +E +++ + + + + +R R A +P + + G++D DL+ + +I
Sbjct: 61 SVWAEVLEQTVSDALRNVFDERGIRPAGQPKVDLVSGQTD-------DGKDLEFTVEAEI 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
LP+I + DL +T+ V ++ I++ + +IAK FE + GD V +D+
Sbjct: 114 LPEIAVPDLSDLTLTRLKANVSDEAINKVLEDIAKRGRTFEVVEEVRPVAKGDVVAIDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E S ++V +G E + G+K G++K I FPED+ +LAGK
Sbjct: 174 GKRDGVPFEGGSAEDVNVEIGGEGFIPGFAEQIEGMKPGEEKVITVTFPEDYGATELAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + K++ P+ ++++LA ++GFES ++ L ++++ + L R ++KR++L
Sbjct: 234 EATFDIKAKQIKKPVDAPIDDELAKKMGFESLDQLKDLIRKQVEGEYDQLSRLRIKRELL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ K F PE +V+ E+N I +V + S ++ + +E Y +A+RRV
Sbjct: 294 DELAKKTDFTAPEGMVDAEFNQIWARVEEDRKSGQLDDEDKNKDEETLRADYRKIAERRV 353
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG KNNI VT +E+ A+ + R+PG EK++ + FQK P A LR PIFE
Sbjct: 354 KLGLLLAEIGRKNNITVTPDELGRAVRAEAMRYPGQEKQVFEFFQKNPQAAESLRGPIFE 413
Query: 419 DKVIDHILKSVQIVDRKVTFDQL 441
+KV+D++++ ++ D++VT ++L
Sbjct: 414 NKVVDYLIELAKVTDKEVTPEEL 436
>gi|312113122|ref|YP_004010718.1| trigger factor [Rhodomicrobium vannielii ATCC 17100]
gi|311218251|gb|ADP69619.1| trigger factor [Rhodomicrobium vannielii ATCC 17100]
Length = 486
Score = 288 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 147/469 (31%), Positives = 284/469 (60%), Gaps = 1/469 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E S+GLKR+L V++P+ L +++D+ SK + GFRPGKVP++H++ +YG+
Sbjct: 1 MQVTETVSDGLKRQLKVVVPAADLKVKVESKLQDLTSKVKLNGFRPGKVPIAHVRQMYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L+E ++E + E ++L +R ER A +P I + E + D+ +++GT DL+ +++++
Sbjct: 61 SVLAEVLEETVGESSAKVLEERKERPAFQPDIKLPE-DKDVIERMLDGTGDLEYTMAFEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+IE++ + +T+D+ + E+++ + + K NVA+E K+ +E GD++T+D+ S
Sbjct: 120 LPKIELTDLKAITLTKDVADPKEEDVKGAIDRLLKANVAYETKDGAAEAGDRLTIDFKGS 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + ++ ++GS + L+G K DQ++++ FPED+ LAGK
Sbjct: 180 IDGEPFEGGAAEDAFLVLGSGRFIPGFEDGLIGAKAADQRDVKVTFPEDYQAPHLAGKDA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K+V P+ +++ A LG ES + + ++++ + R K+K+++LD
Sbjct: 240 VFDVTVKDVSKPVDAKADDEFAKTLGLESFAKLEDAVRGQLRKELDDASRAKLKKELLDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ ++ ++P SLV +E++GI + + ++ A + ++ S +E+ Y LA+RRV
Sbjct: 300 LDERHAVELPPSLVTSEFDGIWRGITRQLEQAKKTFEDEGSTEEKARAEYQKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IG +N I++ ++E++ A+ + +FPG E+++++ ++K P AL ELRAP++EDK
Sbjct: 360 GLVLSEIGNQNEIKILDDELRRAMIDRARQFPGQEREVIEFYRKNPQALNELRAPVYEDK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
VI +L+ V+ + KV+ + L + +E E+ L E + P
Sbjct: 420 VITFVLELVKTEENKVSPEDLMKSLAELEREQSLFDGGIEEEHEHVHGP 468
>gi|217979043|ref|YP_002363190.1| trigger factor [Methylocella silvestris BL2]
gi|254789011|sp|B8EIL1|TIG_METSB RecName: Full=Trigger factor; Short=TF
gi|217504419|gb|ACK51828.1| trigger factor [Methylocella silvestris BL2]
Length = 462
Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats.
Identities = 151/441 (34%), Positives = 249/441 (56%), Gaps = 4/441 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E S+GLKRE V++P+ L + ++ ++R+KA I GFRPGKVP++H+K LYG+
Sbjct: 1 MQVTETLSQGLKREFQVVLPATDLATRLDSQLAEMRAKARINGFRPGKVPVAHLKRLYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI++E + E + E +I+ R A +P I GE D E D ++ ++
Sbjct: 61 SIMAEVVQEAVNEAHRKIIEDNALRPASQPKIDFP-GEKDELEKAFEAKADFAFTVALEV 119
Query: 121 LPQIEISSFDDLQVTQDIC---EVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
LP+IEI SF+ +++ + + E + + ++AE ++ E + GDK T+D+
Sbjct: 120 LPKIEIGSFEGVEIERLVAAVSEDEIDLVVNRLAEQSRPYTPKEGDGVVATKGDKATIDF 179
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D E S + V ++GS E L GLK GD + + FP+D+S LAG
Sbjct: 180 VGKIDGEAFEGGSGEGVDLVLGSGSFIPGFEEQLEGLKLGDSRTVTVTFPDDYSAAHLAG 239
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K+ + ++K + +P V+++ A G E + +R I++ R+K KR +
Sbjct: 240 KEAVFDVTLKALAAPGETVIDDAFAKGYGLEDLTKLRESIKANIERDYAAASRRKWKRAL 299
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + KY FD+PE LV E++ I ++V E S + + + + +E Y +A+RR
Sbjct: 300 LDALDAKYAFDLPEGLVAQEFDAIWRRVEAEQSQSGRSFADEGTTEEAARADYRKIAERR 359
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G++L +G+ ++V +EE+ AL+++ FPG EK + D++QK P+ALAELRAPI+
Sbjct: 360 VRLGLLLADVGDAAGVKVADEEVNQALFERARSFPGQEKMVWDYYQKNPSALAELRAPIY 419
Query: 418 EDKVIDHILKSVQIVDRKVTF 438
E+KV+DHIL V++ D+ V
Sbjct: 420 EEKVVDHILSLVKVTDKAVPK 440
>gi|319408369|emb|CBI82022.1| trigger factor [Bartonella schoenbuchensis R1]
Length = 513
Score = 286 bits (730), Expect = 6e-75, Method: Composition-based stats.
Identities = 166/447 (37%), Positives = 278/447 (62%), Gaps = 5/447 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ +++P+ L NER+++ + K + GFRPGKVP SH++ +YGK
Sbjct: 39 MQVTETLNEGLKREIKIVVPAKDLEIKLNERLDETKDKIKLNGFRPGKVPASHLRKMYGK 98
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S +++ ++EIIK IL+ R+ER+A +P I I E +++G D L Y++
Sbjct: 99 SFMADVLNEIIKNAPSSILADRNERSATQPHIDIKE-----DKEVLDGKADFVFNLKYEV 153
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+ +I F +++VT+++ ++ EKEID Q+ I + + K + GD+VT+DY
Sbjct: 154 LPKFDIKDFKNIKVTRELADIPEKEIDEQVKNILSSTRNYSEKNAPAVEGDRVTIDYIGK 213
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D+V ++ + + Q I+GS E LVG+K GD I FP+D+S LAG+
Sbjct: 214 FDDVPFDNGAGNDAQLILGSKQFIPGFEEQLVGVKAGDTTTISVKFPDDYSAAHLAGRDA 273
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K VF P + +N++ A +LG ES +R + +++ + RQKVKRQILD
Sbjct: 274 VFDVTVKAVFKPDELEINDESAQKLGVESLDRLREIVRGQVESKYGSMTRQKVKRQILDA 333
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F++PE L++ E+N I +V ++ A ++ + +E+ Q Y MLA+RRV
Sbjct: 334 LDADYNFEIPECLLDVEFNNIWGQVNNDLQKAGSSFEDEGTTEEQARQEYQMLAQRRVRL 393
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IG + +++V+E+E+Q+A++ Q+ ++PG EK++++ F+ P A+A LRAPIFE+K
Sbjct: 394 GLVLSEIGVRADVKVSEDELQAAIFDQVRQYPGQEKEIMNFFRNTPGAIASLRAPIFEEK 453
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSE 447
VID++L +++ D+KVT ++L E
Sbjct: 454 VIDYLLAQIKVTDKKVTVEELMKEDDE 480
>gi|329114673|ref|ZP_08243432.1| Trigger factor [Acetobacter pomorum DM001]
gi|326696153|gb|EGE47835.1| Trigger factor [Acetobacter pomorum DM001]
Length = 444
Score = 286 bits (730), Expect = 7e-75, Method: Composition-based stats.
Identities = 138/443 (31%), Positives = 247/443 (55%), Gaps = 9/443 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLKR V +P+ + + R++++ + N+ GFRPGKVP+S K YG+
Sbjct: 1 MQVTETLSEGLKRGFTVTVPAAEIASKRDARLKEVAANLNLPGFRPGKVPVSLAKQRYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +E +++ + + + + +R R A +P + + G++D DL+ + ++
Sbjct: 61 SVWAEVLEQTVSDALRNVFDERGIRPAGQPKVDLVSGQAD-------DGKDLEFTVEAEL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
LP+I + DL +T+ V ++ I++ + +IAK FE + GD V +D+
Sbjct: 114 LPEIAVPDLSDLTLTRLKANVSDEAINKVLEDIAKRGRTFEVVEEVRPVAKGDVVAIDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E S ++V +G E + G+K G++K I FP D+ +LAGK
Sbjct: 174 GKRDGVPFEGGSAEDVNVEIGGEGFIPGFAEQIEGMKPGEEKVITVTFPADYGATELAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + K++ P+ ++++LA ++GFES ++ L ++I+ + L R ++KR++L
Sbjct: 234 EATFDIKAKQIKKPVDAPIDDELAKKMGFESLDQLKDLIRKQIEGEYDQLSRLRIKRELL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ K F PE +V+ E+N I +V + S ++ + +E Y +A+RRV
Sbjct: 294 DELAKKTDFTAPEGMVDAEFNQIWARVEEDRKSGQLDDEDKNKDEETLRADYRKIAERRV 353
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG KNNI VT +E+ A+ + R+ G EK++ + FQK P A LR PIFE
Sbjct: 354 KLGLLLAEIGRKNNITVTPDELGRAVRAEAMRYQGQEKQVFEFFQKNPQAAESLRGPIFE 413
Query: 419 DKVIDHILKSVQIVDRKVTFDQL 441
+KV+D++++ ++ D++VT ++L
Sbjct: 414 NKVVDYLIELAKVTDKEVTPEEL 436
>gi|83311892|ref|YP_422156.1| trigger factor [Magnetospirillum magneticum AMB-1]
gi|82946733|dbj|BAE51597.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Magnetospirillum
magneticum AMB-1]
Length = 481
Score = 284 bits (727), Expect = 1e-74, Method: Composition-based stats.
Identities = 137/471 (29%), Positives = 249/471 (52%), Gaps = 9/471 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE V++P+ +L +++ +I + GFRPGKVP++ ++ YG
Sbjct: 20 MQVTEINAEGLKREFKVVVPAQQLETRMQDKLAEIARTVAMPGFRPGKVPMTIVRKKYGG 79
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E ++ + + + ++ R AM+P I I + E DL+ ++ ++
Sbjct: 80 AVMGEILENAVNDGAGKAITDGGLRPAMQPKIEITKY---------EENSDLEFTVAVEV 130
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+I+ F + + +D V + E+D +A+IA+ N E + S+ GD V +D+
Sbjct: 131 LPEIKTMDFGTINLVRDKAVVPDAEVDDALAKIAERNETSEPVKRASKSGDVVVIDFVGK 190
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD V + + +GS + LVG K E+ FPE + + LAGK
Sbjct: 191 VDGVAFPGGTAEGYSLKLGSNTFIPGFEDQLVGKKAESDVEVNVTFPEGYGNETLAGKPA 250
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+KEV +P V+++LA +G E+ A++ +I + + + R K+KR +LD
Sbjct: 251 LFEVKVKEVRAPKAAAVDDELAKSVGLENLDALKTAIRDEISRELDGVSRMKLKRALLDA 310
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+S+ + F VP S++E E+ I ++V + + Q + ++E Y LA+RRV
Sbjct: 311 LSDGHDFPVPPSMLEGEFEAIWKQVEADKEAGRQDPADAAKSEDELKADYRALAERRVRL 370
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G++L +G N I VT+E++ + + R+PG E +L ++QK AL LRAP++E+K
Sbjct: 371 GLLLADVGRVNEINVTQEDLNRGIMMEARRYPGQEHLVLQYYQKNQEALESLRAPLYEEK 430
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+D IL+ +I D++V+ + L + E+S + + + +++ +E
Sbjct: 431 VVDFILELAKITDKEVSVEDLRKDPDEASADGEAAPAKPKKKAAAKKKAAE 481
>gi|46201593|ref|ZP_00054775.2| COG0544: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger
factor) [Magnetospirillum magnetotacticum MS-1]
Length = 460
Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats.
Identities = 135/451 (29%), Positives = 244/451 (54%), Gaps = 9/451 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLK E V++P+ +L +++ +I + GFRPGKVP++ ++ YG
Sbjct: 1 MQVTEINAEGLKHEFKVVVPAQQLETRMQDKLAEIARTVAMPGFRPGKVPMTIVRKKYGG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E ++ + + + ++ R AM+P I I + E DL+ +S ++
Sbjct: 61 AVMGEILENAVNDGAGKAITDNGLRPAMQPKIEITKY---------EENSDLEFTVSVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+I+I F + + +D V + E+D +A+IA+ N + E + S+ GD + +D+
Sbjct: 112 LPEIKIMDFGTVNLVRDKAVVPDAEVDDALAKIAERNESSEPVKRASKSGDVLVIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD V + + +GS + L+G K E+ FPE + + LAGK
Sbjct: 172 VDGVAFPGGTAEGYSLKLGSNTFIPGFEDQLIGKKADADVEVNVTFPEGYGNEALAGKPA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+KEV +P V+++LA +G E+ A++ +I + + + R K+KR +LD
Sbjct: 232 LFEVKVKEVRAPKAAAVDDELAKSVGLENLDALKTAIRDEIARELDGVSRIKLKRALLDA 291
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+S + F VP S++E+E+ I ++V + + Q + + +++ Y LA+RRV
Sbjct: 292 LSAGHDFPVPPSMLESEFEAIWKQVEADKEAGRQDAADAGKSEDDLKAEYRTLAERRVRL 351
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G++L +G N I VT+E++ + + R+PG E +L ++QK AL LRAPI+E+K
Sbjct: 352 GLLLAEVGRVNEINVTQEDVNRGIMNEARRYPGQEHLVLQYYQKNQEALESLRAPIYEEK 411
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
V+D IL+ ++ D++V+ + L + E+S E
Sbjct: 412 VVDFILELAKVTDKEVSVEDLRKDPDEASAE 442
>gi|118590048|ref|ZP_01547452.1| trigger factor [Stappia aggregata IAM 12614]
gi|118437545|gb|EAV44182.1| trigger factor [Stappia aggregata IAM 12614]
Length = 449
Score = 281 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 172/452 (38%), Positives = 278/452 (61%), Gaps = 3/452 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLKREL + IP+ L ++ + D++SKANIKGFRPGKVPL+H+K +YG+
Sbjct: 1 MQVTETLSEGLKRELKIDIPAGDLAAKLDDYMADLKSKANIKGFRPGKVPLAHLKKMYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++E + I+E + + +R ER A+ P I + E + ++ G DL +++YDI
Sbjct: 61 QAMAEILSNTIQETTQKAVEERSERPALTPEIDLPE---EDAEKILAGDADLSFKMTYDI 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP EI F +++ + + E+ E E+D Q+++IAKNN F+ K+ + GD+VT+ Y
Sbjct: 118 LPSFEIVDFSGIEIERPVVEIAEDEVDDQVSQIAKNNTPFDAKDGAAADGDRVTMSYLGK 177
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +N ++GS E LVG+K GD+K IE FPED+ LAGK
Sbjct: 178 IDGEPFEGGADENGMLVLGSGQFIPGFEEQLVGVKAGDEKVIEVSFPEDYPAAHLAGKAA 237
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV +P V+++ A LG ES ++ + +I+ + RQ+VKRQ+LD
Sbjct: 238 TFDIVVKEVAAPGEAKVDDEFAKNLGLESLDKLKEIVRGQIEGQFGQMTRQRVKRQLLDK 297
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+FD+PE L+ +E++ + ++V +M + ++ D+ +EE Y +A+RRV
Sbjct: 298 LDEHYSFDLPEKLLNSEFDVVWRQVEEDMKRNEKTFEDEDTTEEEAKAEYRKIAERRVRL 357
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGE+NNI+VT+EE+Q ALY ++ +FPG E+++ + ++ ALA LRAPI+E+K
Sbjct: 358 GLVLSEIGEQNNIQVTDEELQRALYDRVRQFPGQEQQVFEFYKNNQQALASLRAPIYEEK 417
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
V+D +L+ ++ D+ VT ++L +E E
Sbjct: 418 VVDFMLELAKVTDKTVTKEELEKLVAEEEDEA 449
>gi|265988583|ref|ZP_06101140.1| trigger factor [Brucella pinnipedialis M292/94/1]
gi|264660780|gb|EEZ31041.1| trigger factor [Brucella pinnipedialis M292/94/1]
Length = 517
Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats.
Identities = 170/447 (38%), Positives = 284/447 (63%), Gaps = 1/447 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 9 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 69 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 128 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 188 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 248 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 307
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 308 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 367
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 368 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 427
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSE 447
V+DH+L ++ + D+KV+ ++L +
Sbjct: 428 VVDHLLANINVTDKKVSKEELTAEDED 454
>gi|90419397|ref|ZP_01227307.1| trigger factor [Aurantimonas manganoxydans SI85-9A1]
gi|90336334|gb|EAS50075.1| trigger factor [Aurantimonas manganoxydans SI85-9A1]
Length = 454
Score = 280 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 160/455 (35%), Positives = 287/455 (63%), Gaps = 1/455 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+++++P++ L R+ + + + +KGFRPGKVP+ H++ +YGK
Sbjct: 1 MQVTETKAEGLKREIEIVVPASDLEARLQTRLYEAKDRVQLKGFRPGKVPVGHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E +++I+ E ++++R+ER+AM+P I ++E E++ ++ G D K L+Y+
Sbjct: 61 SLMAEIVNQILTETPRNVIAERNERSAMQPEIGMSEDEAE-AEKVLNGGADFKFTLTYET 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP EI + +++ + + EV ++EID Q+ IA+N + K+ ++ GD+VT+D+
Sbjct: 120 LPAFEIKGTEGIKIERPVVEVADEEIDEQVERIAENARTYAAKDGAADKGDRVTMDFVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + + + ++GS + L+G+K GD+K +E FPED+ LAGK
Sbjct: 180 IDGEPFDGGTATDSNLVIGSGQFIPGFEDQLIGVKAGDEKTVELTFPEDYGAAHLAGKPA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV +P ++++ A +LG ES ++ + ++I+ RQKVKRQ+LD
Sbjct: 240 TFDVTVKEVAAPEETTIDDEFAAKLGVESLDRLKTVVREQIESQYGQATRQKVKRQLLDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y FD+PE LVE E+ I +V+ E++++ + ++ D+ +E+ Y LA+RRV
Sbjct: 300 LDAAYDFDLPEKLVEAEFTNIWNQVQGELTNSGKTFEDEDTTEEKARAEYRRLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +++T+EE+Q A+++QL R+PG EK++ ++FQK P+A+A LRAP++E+K
Sbjct: 360 GLVLSEIGEKAGVQITDEELQRAMFEQLRRYPGQEKEVYEYFQKNPDAVASLRAPLYEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
V+DH+L V + D+ V+ ++L + L
Sbjct: 420 VVDHLLAEVDVTDKTVSKEELMAEDEDDKETALAS 454
>gi|288958759|ref|YP_003449100.1| trigger factor [Azospirillum sp. B510]
gi|288911067|dbj|BAI72556.1| trigger factor [Azospirillum sp. B510]
Length = 443
Score = 280 bits (715), Expect = 4e-73, Method: Composition-based stats.
Identities = 138/452 (30%), Positives = 248/452 (54%), Gaps = 12/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E ++GLKRE V+I + + + N ++E++R + GFRPGKVP++ IK Y
Sbjct: 1 MNITETSTDGLKREFQVVISAKDIEEKVNGKLEELRRTVQLPGFRPGKVPVTVIKQRYFG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+LSE +++ I + + L+ R R A++P I + + E DL +++ ++
Sbjct: 61 GVLSEVLEDAISDSSRQALNDRGLRVALQPKIEVEKY---------EDGGDLTYKMAVEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
LP +E +++ + + EV E+ ++ +A +A ++ ++ +E GD +D+
Sbjct: 112 LPDVEPGDLSGIELEKPVAEVTEESVEEALARLASSHSTQAPVTEDRAAETGDIAVIDFA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD L K+ +G+ E LVG+K G+ + + FPED+ + L G
Sbjct: 172 GTVDGEALPGMDGKDYPLELGAGRFVPGFEEQLVGVKAGEHRTVNVTFPEDYPHERLKGA 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+KE+ +P VN++LA G ES MR +IK L R +VKRQ+L
Sbjct: 232 ATVFEVDVKELRKNVPAEVNDELAKEFGMESLEKMREAVRDRIKGEYGNLSRLRVKRQLL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ ++F+VP +VE E+ GI ++++ E+ + ++ ++E Y +A+RRV
Sbjct: 292 DKLAEAHSFEVPAGMVEIEFGGIWERLQEEIKN-GTAGEDAGKSEDELKTEYRAIAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G +NNI+VT++E+ AL + RFPG E+++ + F++ AL LRAPIFE
Sbjct: 351 RLGLLLSEVGRRNNIQVTQDEVNRALINEARRFPGQERQVFEFFKQNQQALENLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+DHIL ++ ++ V+ ++L + E+
Sbjct: 411 DKVVDHILDQAKVTEKTVSVEELTKDEDEAEA 442
>gi|118574074|sp|Q2W3H8|TIG_MAGMM RecName: Full=Trigger factor; Short=TF
Length = 462
Score = 279 bits (714), Expect = 4e-73, Method: Composition-based stats.
Identities = 137/471 (29%), Positives = 249/471 (52%), Gaps = 9/471 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE V++P+ +L +++ +I + GFRPGKVP++ ++ YG
Sbjct: 1 MQVTEINAEGLKREFKVVVPAQQLETRMQDKLAEIARTVAMPGFRPGKVPMTIVRKKYGG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E ++ + + + ++ R AM+P I I + E DL+ ++ ++
Sbjct: 61 AVMGEILENAVNDGAGKAITDGGLRPAMQPKIEITKY---------EENSDLEFTVAVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+I+ F + + +D V + E+D +A+IA+ N E + S+ GD V +D+
Sbjct: 112 LPEIKTMDFGTINLVRDKAVVPDAEVDDALAKIAERNETSEPVKRASKSGDVVVIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD V + + +GS + LVG K E+ FPE + + LAGK
Sbjct: 172 VDGVAFPGGTAEGYSLKLGSNTFIPGFEDQLVGKKAESDVEVNVTFPEGYGNETLAGKPA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+KEV +P V+++LA +G E+ A++ +I + + + R K+KR +LD
Sbjct: 232 LFEVKVKEVRAPKAAAVDDELAKSVGLENLDALKTAIRDEISRELDGVSRMKLKRALLDA 291
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+S+ + F VP S++E E+ I ++V + + Q + ++E Y LA+RRV
Sbjct: 292 LSDGHDFPVPPSMLEGEFEAIWKQVEADKEAGRQDPADAAKSEDELKADYRALAERRVRL 351
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G++L +G N I VT+E++ + + R+PG E +L ++QK AL LRAP++E+K
Sbjct: 352 GLLLADVGRVNEINVTQEDLNRGIMMEARRYPGQEHLVLQYYQKNQEALESLRAPLYEEK 411
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+D IL+ +I D++V+ + L + E+S + + + +++ +E
Sbjct: 412 VVDFILELAKITDKEVSVEDLRKDPDEASADGEAAPAKPKKKAAAKKKAAE 462
>gi|254710001|ref|ZP_05171812.1| trigger factor [Brucella pinnipedialis B2/94]
gi|254714002|ref|ZP_05175813.1| trigger factor [Brucella ceti M644/93/1]
gi|254716939|ref|ZP_05178750.1| trigger factor [Brucella ceti M13/05/1]
gi|256031495|ref|ZP_05445109.1| trigger factor [Brucella pinnipedialis M292/94/1]
gi|261218745|ref|ZP_05933026.1| trigger factor [Brucella ceti M13/05/1]
gi|261317549|ref|ZP_05956746.1| trigger factor [Brucella pinnipedialis B2/94]
gi|261321756|ref|ZP_05960953.1| trigger factor [Brucella ceti M644/93/1]
gi|260923834|gb|EEX90402.1| trigger factor [Brucella ceti M13/05/1]
gi|261294446|gb|EEX97942.1| trigger factor [Brucella ceti M644/93/1]
gi|261296772|gb|EEY00269.1| trigger factor [Brucella pinnipedialis B2/94]
Length = 509
Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats.
Identities = 170/447 (38%), Positives = 284/447 (63%), Gaps = 1/447 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSE 447
V+DH+L ++ + D+KV+ ++L +
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDED 446
>gi|295689639|ref|YP_003593332.1| trigger factor [Caulobacter segnis ATCC 21756]
gi|295431542|gb|ADG10714.1| trigger factor [Caulobacter segnis ATCC 21756]
Length = 454
Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats.
Identities = 125/452 (27%), Positives = 248/452 (54%), Gaps = 7/452 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ++EK EGL R V +P++ L + RI ++ + N+KGFRPGKVP +H++ +YGK
Sbjct: 3 MQIVEKSGEGLSRVFGVTVPASELATRLDARIAEVAPQMNVKGFRPGKVPTAHVRRMYGK 62
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E +++ + E ++L + R A +P + + + I G DL L+ ++
Sbjct: 63 ALMGEVVEQALNETTQKVLEENKLRPAGQPELNPSSDMEKV----IAGGEDLAFELAVEV 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---EIGDKVTVDY 177
+P+ + +++ + + +V + E+D + E+AK +E + +S + GD++ +D+
Sbjct: 119 MPEFDPIDPASIELVKPVYKVTDAEVDEALDELAKQARTYEPRTGKSVKAKDGDQLLIDF 178
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
++D V + + ++GS + LVG K GD ++ FPE++ K+LAG
Sbjct: 179 VGTIDGVEFAGGKAEGAELVLGSGQFIPGFEDQLVGAKAGDDVVVKVKFPEEYQAKELAG 238
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K ++EV +P+ +++LA RLG +A++ L + + R K+KR +
Sbjct: 239 KDAEFATKVQEVRAPVDGKADDELAKRLGLSDLAALKELLRSNLSGRYDNSSRFKLKRAL 298
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + K+ F +P +V+ E+ GI Q+V + + ++ + +++ Y +A+RR
Sbjct: 299 LDVLDTKHDFPLPPRMVDAEFAGIWQQVEADKARGGLPPEDAEKSEDQLQSEYRKIAERR 358
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL IG KN++ VT++E+ A+ ++ ++ +++ D +++ + A LRAPI+
Sbjct: 359 VRLGLVLAEIGRKNDVVVTDQELTDAIMREARQYGAQAQQVFDMYRQRADLQAALRAPIY 418
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
EDKV+D I ++ +++V+ D+L +
Sbjct: 419 EDKVVDLIFGKAKVEEKEVSKDELLEEDDLPE 450
>gi|114327973|ref|YP_745130.1| trigger factor [Granulibacter bethesdensis CGDNIH1]
gi|122327065|sp|Q0BSJ5|TIG_GRABC RecName: Full=Trigger factor; Short=TF
gi|114316147|gb|ABI62207.1| trigger factor, ppiase [Granulibacter bethesdensis CGDNIH1]
Length = 444
Score = 279 bits (712), Expect = 9e-73, Method: Composition-based stats.
Identities = 126/448 (28%), Positives = 244/448 (54%), Gaps = 11/448 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLKR V +P+ + + R+ ++ + GFRPGKVP++ ++ YG+
Sbjct: 1 MQVTETLSEGLKRGFTVQVPATDIEERRTRRLAELAKTLKLPGFRPGKVPMTLVRQRYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +E ++E + E ++S+R R A++P + + + D D++ ++ ++
Sbjct: 61 SVETEVLEETVNEATQTMVSERGLRPALQPKVELVRVDLD---------QDVEFKVELEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE--TESEIGDKVTVDYT 178
LP I + + +T+ E + +D+ + EIA+ E E ++ GD +TVD+
Sbjct: 112 LPDITLPDLGSVSLTRLKAEPSAEAVDKALEEIAQRQRNLEPVEEVRPAQKGDFLTVDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V + + ++ + +E + GL G+ + I+ FPE++ + +LAGK
Sbjct: 172 GKTDGVAFQGGTGTDMDVEIAGTGFIPGFSEQMEGLSVGETRVIDVTFPEEYGVPELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + K + + V+++ A +LG +S +R + +Q+I+ + + R +VKR +L
Sbjct: 232 PAQFEITAKALKKAVAPVIDDAFATKLGLDSLEKLREIVTQQIQNEYDQVSRLRVKRALL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++++ F+VP +LVENE+N I Q+V + + + ++ Y +A+RRV
Sbjct: 292 DALADQAAFEVPPTLVENEFNQIWQRVDADRKADRLDEDDKGKDEDTLRADYRKIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG N ++V +E+ A+ + R+PG E+ +LD F++ P A+ LR PIFE
Sbjct: 352 RLGLLLAEIGRVNGVQVGNDELIRAMRAEASRYPGQEQAVLDFFRQNPQAIDSLRGPIFE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
+KV+D +L++ ++ D+ V+ ++L +
Sbjct: 412 EKVVDFVLETAKVDDKFVSIEELNADED 439
>gi|154247517|ref|YP_001418475.1| trigger factor [Xanthobacter autotrophicus Py2]
gi|238686731|sp|A7ILC5|TIG_XANP2 RecName: Full=Trigger factor; Short=TF
gi|154161602|gb|ABS68818.1| trigger factor [Xanthobacter autotrophicus Py2]
Length = 452
Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats.
Identities = 147/451 (32%), Positives = 265/451 (58%), Gaps = 2/451 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E ++GLKR V++ + L + ++ +++ + + GFRPGKVP++H+K +YGK
Sbjct: 1 MQVTETQADGLKRAFRVVVSAADLGAKADAKLAELKGQVKLNGFRPGKVPVAHLKRVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++SE I++ + E +I+ + + A++P + + E + GL+EG DL L +I
Sbjct: 61 SVMSEVIEQTVNETNGKIVEEHGFKLALQPKVKLPEEDP-QAQGLLEGGKDLAYDLEIEI 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYTV 179
LP+IE+ +F D+ V + + EV + E+D + IA N F +E D+VT+D+T
Sbjct: 120 LPKIELGNFKDISVEKLVVEVSDAEVDETIQRIADANRPFVTREGGYAENGDRVTIDFTG 179
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +++ ++GS E L+G+ GD + + FPE ++ K+LAGK
Sbjct: 180 YVDGEKFPGGEGQDIDVLLGSNGFIPGFEEQLLGVYAGDNRTLNVTFPEAYAAKELAGKA 239
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++K V +P P+ ++++ A LG ES ++ + +I RQKVKR +LD
Sbjct: 240 ATFEVTVKSVAAPGPLTLDDEFAKTLGQESLEKLKEMVRARIASEHAGAARQKVKRALLD 299
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + F VPE LVE E+ G+ +V+ ++++ N+ + + +EE Y +A+RRV
Sbjct: 300 ALDTTHQFAVPEGLVEQEFFGVWSRVQEDLAAQNRSFADEGTTEEEARADYRKIAERRVR 359
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G+VL IGE+NNI+V+E+E+ A+ ++ +FPG E+++ +++++ P ALA +RAP+FE+
Sbjct: 360 LGLVLAEIGERNNIQVSEDEVTRAVVERARQFPGQEQQVWEYYRRTPEALASVRAPLFEE 419
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
KV+D +L+ + ++ VT ++L+ +
Sbjct: 420 KVVDFLLELANVTEKTVTREELYKEEEDDEK 450
>gi|86749680|ref|YP_486176.1| trigger factor [Rhodopseudomonas palustris HaA2]
gi|119370927|sp|Q2IWZ5|TIG_RHOP2 RecName: Full=Trigger factor; Short=TF
gi|86572708|gb|ABD07265.1| trigger factor [Rhodopseudomonas palustris HaA2]
Length = 452
Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats.
Identities = 142/452 (31%), Positives = 262/452 (57%), Gaps = 3/452 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E ++GLKRE +V +P+ + + R+ D++ K + GFRPGKVP+SH+K +YG+
Sbjct: 1 MQVKETVADGLKREFEVNVPAADIDAQVDARLVDLKDKVKLNGFRPGKVPVSHLKRVYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +ETID++++E I ++R R A P IT+ + + + ++ G DL ++ ++
Sbjct: 61 SVAAETIDKLVRETNDGIFAERGFRLATEPKITMPQ-DQKVVEDILAGKSDLNYTVAIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
+P IE++ F V + + EV + ++D + IA+ N A+ + + ++E GD+VT+ +
Sbjct: 120 VPTIELADFKSFSVEKPVVEVSDSDVDDAIKRIAEANRAYADKAEGAKAESGDRVTISFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S++ V + + +++ ++GS + L+G+ G+ + I+ FP +++ + LAGK
Sbjct: 180 GSIEGVPFDGGTGEDIPVVIGSNSFIPGFEDQLIGIAVGETRTIKVTFPTNYASETLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +V +P ++++ A LG ES ++ ++ R +VKRQ+L
Sbjct: 240 PAEFETTATKVEAPQDTTIDDEFAKTLGMESLDKLKEAAKARLAAEYAGATRLRVKRQLL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD P SLVE E+ + Q + EM + + D+ +E + Y +A RRV
Sbjct: 300 DRLDETHKFDAPPSLVEQEFAVMWQSINAEMQQNGKSFADEDTTEEAAREEYRKIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IGEKN I+VT++E+ A+ ++ + PG EK++ D ++ ALA+LRAPI+E
Sbjct: 360 RLGLVLSEIGEKNKIQVTDDEVSRAVIERARQMPGREKEVWDFYRSNAEALAQLRAPIYE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D IL+ + ++ VT ++L+ + + +
Sbjct: 420 DKVVDFILELATVTEKPVTREELYKDDDDKTA 451
>gi|83592884|ref|YP_426636.1| trigger factor [Rhodospirillum rubrum ATCC 11170]
gi|83575798|gb|ABC22349.1| Trigger factor [Rhodospirillum rubrum ATCC 11170]
Length = 463
Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats.
Identities = 125/452 (27%), Positives = 244/452 (53%), Gaps = 10/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +E LKRE ++IP+ + + R+E+++ + + GFRPGKVP+S ++ +GK
Sbjct: 17 MQVTETVNESLKREYKIVIPAADIAERSARRLEELKGQMRLPGFRPGKVPMSMLRQRFGK 76
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L E +++ ++E + E+++ + + A +P I + +E D++ L+ ++
Sbjct: 77 SVLGEVLEKAVQESIREVMTSHELKPATQPDIDLIS--------EVEEGKDVEFTLALEV 128
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP+I + F L + +++ EV ++I+ + + + + E + GD V +D+
Sbjct: 129 LPEIGETDFSALALEREVAEVAAEKIEEALETLRQQSKTHEPVTDGRAAAGGDLVVIDFI 188
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E S + +GS + L+G G+ + + FPED+ LAGK
Sbjct: 189 GKLDGEAFEGGSAEAYDLELGSNSFIPGFEDQLIGATAGEARTVTVSFPEDYPAAHLAGK 248
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++KEV + +++DLA G ES A+R ++ + + + K+KR++L
Sbjct: 249 ETVFDVTVKEVKQAVVPELDDDLAKAFGKESAEALREAVKADLQGELDEVSKTKLKRKLL 308
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D +++ + F VP++LV+ E+ GI ++ + ++ DE+ Y +A+RRV
Sbjct: 309 DALADGHDFPVPQTLVDAEFEGIWAQIEKAKTDGQLDEEDAAKSDEDLRADYRKIAERRV 368
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G++ + V +E++ AL ++L RFPG E ++++++ A+ LRAP+FE
Sbjct: 369 RLGLLLADVGQRAQVTVAQEDLNKALMRELRRFPGQEAAVINYYRNNQQAMDNLRAPVFE 428
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV HIL + D+ V+ + L + E +
Sbjct: 429 DKVCAHILALATVTDKPVSVEDLMKDPDEDAT 460
>gi|115524516|ref|YP_781427.1| trigger factor [Rhodopseudomonas palustris BisA53]
gi|122296223|sp|Q07NN7|TIG_RHOP5 RecName: Full=Trigger factor; Short=TF
gi|115518463|gb|ABJ06447.1| trigger factor [Rhodopseudomonas palustris BisA53]
Length = 453
Score = 278 bits (710), Expect = 1e-72, Method: Composition-based stats.
Identities = 133/450 (29%), Positives = 254/450 (56%), Gaps = 3/450 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E ++GLKRE V + + + + R+++++ K + GFRPGKVPLSH+K YG+
Sbjct: 1 MQVKETVTDGLKREFQVTLAVSDIGSQVDARLDELKDKVRLNGFRPGKVPLSHLKRTYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +E ++++I+E I ++R R A P IT+ ++ ++ G DL ++ ++
Sbjct: 61 SVTAEVLEKLIRETNDNIFTERGFRLATEPKITMPTEAKEVED-VLAGNADLNYTVAVEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
+P+I++ F + V + + EV + ++D + I + N + + + + GD+VTV +
Sbjct: 120 VPEIQLVDFKTISVEKPVVEVGDSDVDDAIKRIVEANRGYDDKGEGATAASGDRVTVSFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D + S + + ++GS + L+G+ G+ + I+ FP +++ +LAGK
Sbjct: 180 GSIDGTPFDGGSAEGIPVVIGSGTFIPGFEDQLIGIAVGETRTIKATFPTNYATAELAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ V +P +++ A LG ES ++ ++ + RQ+VKR +L
Sbjct: 240 AAEFETTATLVEAPKDTPADDEFAKTLGLESLDKLKEAARGRLAAEYAGVSRQRVKRALL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + F+ P +LVE E+ + + + EM+S ++ ++ ++ + Y +A RRV
Sbjct: 300 DRLDEAHQFEAPATLVEQEFEALWRSIVGEMTSTGSTFESENTTEDAAKEEYRKIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IGEKN I+VT++E+ A+ ++ + PG EK++ + ++K P A+A+LRAPIFE
Sbjct: 360 RLGLVLSEIGEKNKIQVTDDEVSRAVMERARQMPGREKEVWEFYRKTPEAVAQLRAPIFE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
DKV+D IL+ + ++ V+ ++L+ +
Sbjct: 420 DKVVDFILELATVTEKPVSKEELYKDDDAD 449
>gi|158423231|ref|YP_001524523.1| trigger factor [Azorhizobium caulinodans ORS 571]
gi|172047855|sp|A8HYF0|TIG_AZOC5 RecName: Full=Trigger factor; Short=TF
gi|158330120|dbj|BAF87605.1| trigger factor [Azorhizobium caulinodans ORS 571]
Length = 449
Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats.
Identities = 150/437 (34%), Positives = 265/437 (60%), Gaps = 1/437 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR V++P+ L +R+ +++ K I GFRPGKVPLSH+KSLYGK
Sbjct: 1 MQVTETQAEGLKRAYTVVLPAAELDAKAQDRLVELKDKVRINGFRPGKVPLSHLKSLYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E I++ + E +I+ R A+ P + + + D +IEG DLK + ++
Sbjct: 61 SVMAEVIEQAVTEANGKIVEDNGLRLALPPKVELPQ-AEDEVKSVIEGQADLKYTVELEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+IE+ +F D+ + + + V ++E+D + IA N +F+ KE + GD++TVD+ S
Sbjct: 120 LPKIELGNFKDIAIEKPVAIVTDEEVDEMVKRIADGNRSFDAKEGAAASGDRITVDFVGS 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E + ++V ++GS E L+GL G+++ I FP ++ LAGK
Sbjct: 180 IDGVPFEGGAGEDVPVVIGSNSFIPGFEEQLIGLSAGEERTINVTFPTNYLSAQLAGKDA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
K+V +P + ++++ A LG ES ++ ++I + E RQ+VKRQ+LD
Sbjct: 240 SFAVKAKQVEAPGELTIDDEFAKTLGLESLDKLKENVRERIAKEHEGATRQRVKRQLLDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + FDVP +LV E+ G+ Q+++ ++ + + + +EE Y +A+RRV
Sbjct: 300 LDAGHKFDVPPTLVSQEFEGVWQQIQTDLQQQGRTFADESTTEEEARAEYQRIAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGE+NNI+VT++E+ A+ ++ +FPG E+++ +++++ A+A LRAP+FE+K
Sbjct: 360 GLVLAEIGERNNIQVTDDEVTRAVVERARQFPGQEQQVWEYYRRNAQAMASLRAPLFEEK 419
Query: 421 VIDHILKSVQIVDRKVT 437
V+D +L+ ++ +++V+
Sbjct: 420 VVDFLLELAKVTEKQVS 436
>gi|296116540|ref|ZP_06835150.1| trigger factor [Gluconacetobacter hansenii ATCC 23769]
gi|295976752|gb|EFG83520.1| trigger factor [Gluconacetobacter hansenii ATCC 23769]
Length = 445
Score = 278 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 145/450 (32%), Positives = 247/450 (54%), Gaps = 8/450 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E S+GLKR V +P+ + R+++I + GFRPGKVPLS +K +G
Sbjct: 1 MQVTETLSDGLKRGFTVTVPAQEIESKRTARLKEIGQSMKLPGFRPGKVPLSIVKQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E +D++I + +L +R R AM+P + + G G + DL+ L+++I
Sbjct: 61 EVQGEILDQVIGDATRTLLDERGLRPAMQPKVELVSG------GEPDSKADLEYTLAFEI 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP+I + L +T+ V+ + +D+ + EIA FE ++ + GD + VD+
Sbjct: 115 LPEIPVPDLSALSLTRLKSAVNAETVDKALKEIAGRQREFETITEDRPAANGDVLMVDFV 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D V + S +V +G A E L G+K GD+K I FP D+ ++LAGK
Sbjct: 175 GKIDGVAFDGGSADDVNVEIGGAGFIPGFAEQLEGMKAGDEKVIHVTFPADYQAENLAGK 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + KE+ P+ ++++LA +LGFE +R L +++++Q E L R ++KR +L
Sbjct: 235 EATFDIKAKELKRPVDAPIDDELAKKLGFEGLEQVRELITKQVEQEYEQLSRLRLKRDLL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ K FD P +V+ E+ I ++ + + ++ D ++ Y +A+RRV
Sbjct: 295 DQLAEKTAFDAPPGMVDAEFTQIWNRIEEDRKAGRLDDEDKDKDEDTLRADYRKIAERRV 354
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG NNI VT++EM A+ + R+PG E+ + + F K P A LR PIFE
Sbjct: 355 KLGLLLAEIGRVNNISVTQDEMVQAIRAEAMRYPGQEQAVFEFFGKNPQAADSLRGPIFE 414
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
+KVID+I++ ++ D++VT ++L + S
Sbjct: 415 NKVIDYIVELAKVEDKEVTPEELAEMPEAS 444
>gi|91977365|ref|YP_570024.1| trigger factor [Rhodopseudomonas palustris BisB5]
gi|122969139|sp|Q135W6|TIG_RHOPS RecName: Full=Trigger factor; Short=TF
gi|91683821|gb|ABE40123.1| trigger factor [Rhodopseudomonas palustris BisB5]
Length = 453
Score = 278 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 143/450 (31%), Positives = 261/450 (58%), Gaps = 3/450 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E ++GLKRE +V +P+ + + R+ D++ K + GFRPGKVP+SH+K +YG+
Sbjct: 1 MQVKETVADGLKREFEVNVPAADIDAQVDARLVDLKDKVKLNGFRPGKVPVSHLKRVYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +ETID++++E I ++R R A P IT+ + + + ++ G DL ++ ++
Sbjct: 61 SVAAETIDKLVRETNDGIFAERGFRLATEPKITMPQ-DQKVVEDILAGKSDLNYTVAIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
+P IE++ F V + + +V + ++D + IA+ N A+ + + ++E GD+VTV +
Sbjct: 120 VPTIELADFKSFSVEKPVVDVGDSDVDEAIKRIAEANRAYADKAEGAKAETGDRVTVSFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D V + + +++ ++GS + L G+ G+ + I+ FP +++ LAGK
Sbjct: 180 GTIDGVAFDGGTGEDIPVVIGSGSFIPGFEDQLAGIGVGETRTIKVSFPANYASDTLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +V +P V ++++ A LG ES ++ ++ R +VKRQ+L
Sbjct: 240 PAEFETTATKVEAPQDVTIDDEFAKTLGMESLDKLKEAARARLGAEYAGATRLRVKRQLL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD P SLVE E+ + + + EM + + D+ +E + Y +A RRV
Sbjct: 300 DRLDETHKFDAPPSLVEQEFEVMWRSINAEMQQNGKSFADEDTTEEAAREEYRKIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IGEKN I+VT++E+ A+ ++ + PG EK++ D ++ ALA+LRAPI+E
Sbjct: 360 RLGLVLSEIGEKNKIQVTDDEVSRAVIERARQMPGREKEVWDFYRSNNEALAQLRAPIYE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
DKV+D+IL+ + ++KVT ++L+ +
Sbjct: 420 DKVVDYILELANVTEKKVTREELYKDDDAD 449
>gi|16126207|ref|NP_420771.1| trigger factor [Caulobacter crescentus CB15]
gi|239977636|sp|P0CAX0|TIG_CAUCR RecName: Full=Trigger factor; Short=TF
gi|239977644|sp|B8GX17|TIG_CAUCN RecName: Full=Trigger factor; Short=TF
gi|13423425|gb|AAK23939.1| trigger factor [Caulobacter crescentus CB15]
Length = 452
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 129/452 (28%), Positives = 245/452 (54%), Gaps = 7/452 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ++EK EGL R V +P++ L RI ++ + N+KGFRPGKVP +H++ LYGK
Sbjct: 1 MQIVEKSGEGLSRVFGVTVPASELATRLEARIAEVAPQMNVKGFRPGKVPTAHVRRLYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E I++ + E ++L R A +P + + +I G DL L+ ++
Sbjct: 61 ALMGEVIEQALNETTTKVLEDNKLRPAGQPELNPSSDM----DKVIAGGEDLSFDLAVEV 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---EIGDKVTVDY 177
+P+ E +++ + + +V ++E+ + E+AK +E + +S + GD++ +D+
Sbjct: 117 MPEFEPIDPTSIELVKPVYKVSDEEVQEALDELAKQARTYEPRTGKSLKAKDGDQLLIDF 176
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
++D V + + ++GS + LVG K GD ++ FPE++ KDLAG
Sbjct: 177 VGTIDGVEFAGGKAEGAELVLGSGQFIPGFEDQLVGAKPGDDVVVKVKFPEEYQAKDLAG 236
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K ++EV +P+ +++LA RLG +A+ L + + R K+KR +
Sbjct: 237 KDAEFATKVQEVRAPVDGKADDELAKRLGLSDLAALTELLKSNLAGRYDNSSRFKLKRAL 296
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + K+ F +P +V+ E+ GI Q+V + + ++ + +++ Y +A+RR
Sbjct: 297 LDVLDTKHDFPLPPRMVDAEFAGIWQQVEADKARGGLPPEDAEKTEDQLKDEYKKIAERR 356
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL IG KN++ VT++E+ A+ ++ ++ +++ D +++ + A LRAPI+
Sbjct: 357 VRLGLVLAEIGRKNDVVVTDQELTDAIMREARQYGAQAQQVFDMYRQRADLQAALRAPIY 416
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
EDKV+D I +I +++V+ D+L +
Sbjct: 417 EDKVVDLIFGKAKIEEKEVSKDELLEEDDLPE 448
>gi|254780897|ref|YP_003065310.1| trigger factor [Candidatus Liberibacter asiaticus str. psy62]
gi|254040574|gb|ACT57370.1| trigger factor [Candidatus Liberibacter asiaticus str. psy62]
Length = 473
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 473/473 (100%), Positives = 473/473 (100%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK
Sbjct: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI
Sbjct: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS
Sbjct: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV
Sbjct: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY
Sbjct: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT
Sbjct: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK
Sbjct: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS
Sbjct: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
>gi|221234979|ref|YP_002517415.1| trigger factor [Caulobacter crescentus NA1000]
gi|220964151|gb|ACL95507.1| trigger factor, ppiase [Caulobacter crescentus NA1000]
Length = 454
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 129/452 (28%), Positives = 245/452 (54%), Gaps = 7/452 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ++EK EGL R V +P++ L RI ++ + N+KGFRPGKVP +H++ LYGK
Sbjct: 3 MQIVEKSGEGLSRVFGVTVPASELATRLEARIAEVAPQMNVKGFRPGKVPTAHVRRLYGK 62
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E I++ + E ++L R A +P + + +I G DL L+ ++
Sbjct: 63 ALMGEVIEQALNETTTKVLEDNKLRPAGQPELNPSSDM----DKVIAGGEDLSFDLAVEV 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---EIGDKVTVDY 177
+P+ E +++ + + +V ++E+ + E+AK +E + +S + GD++ +D+
Sbjct: 119 MPEFEPIDPTSIELVKPVYKVSDEEVQEALDELAKQARTYEPRTGKSLKAKDGDQLLIDF 178
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
++D V + + ++GS + LVG K GD ++ FPE++ KDLAG
Sbjct: 179 VGTIDGVEFAGGKAEGAELVLGSGQFIPGFEDQLVGAKPGDDVVVKVKFPEEYQAKDLAG 238
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K ++EV +P+ +++LA RLG +A+ L + + R K+KR +
Sbjct: 239 KDAEFATKVQEVRAPVDGKADDELAKRLGLSDLAALTELLKSNLAGRYDNSSRFKLKRAL 298
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + K+ F +P +V+ E+ GI Q+V + + ++ + +++ Y +A+RR
Sbjct: 299 LDVLDTKHDFPLPPRMVDAEFAGIWQQVEADKARGGLPPEDAEKTEDQLKDEYKKIAERR 358
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL IG KN++ VT++E+ A+ ++ ++ +++ D +++ + A LRAPI+
Sbjct: 359 VRLGLVLAEIGRKNDVVVTDQELTDAIMREARQYGAQAQQVFDMYRQRADLQAALRAPIY 418
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
EDKV+D I +I +++V+ D+L +
Sbjct: 419 EDKVVDLIFGKAKIEEKEVSKDELLEEDDLPE 450
>gi|114797334|ref|YP_760767.1| trigger factor [Hyphomonas neptunium ATCC 15444]
gi|123323159|sp|Q0C0H6|TIG_HYPNA RecName: Full=Trigger factor; Short=TF
gi|114737508|gb|ABI75633.1| trigger factor [Hyphomonas neptunium ATCC 15444]
Length = 445
Score = 277 bits (708), Expect = 2e-72, Method: Composition-based stats.
Identities = 140/449 (31%), Positives = 247/449 (55%), Gaps = 6/449 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + +EGL R V +P + L + RIE+IR + +KGFRPGKVP +H++ +YG+
Sbjct: 1 MEVTQTKAEGLSRTFAVKVPVSELQAKLDARIEEIRPQMRLKGFRPGKVPAAHVRKMYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E ID+++ E + L + R A P++ + + +G DL ++ D+
Sbjct: 61 DLMGEVIDKLVNETNQKALEENSLRPAGTPNVDMQADIEKVVTGK----EDLSYQMHVDV 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
+P+ L + + + E+ +++ID + IA N+ +E + S+ GD V VD+
Sbjct: 117 MPEFTPVDVSTLTIVRPVAEIADEQIDEALKRIADQNMKYEPRAEGEASQDGDAVIVDFV 176
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E + + ++G+ E L+G+K G++KE+ FPED+ +LAGK
Sbjct: 177 GKIDGEAFEGGTAEQQSVVLGANRFIPGFEEQLLGVKAGEEKELNVSFPEDYPAANLAGK 236
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I EV +P ++++ A LG ES +RGL ++ R K KR +L
Sbjct: 237 AAVFETKIHEVRAPQTPEMDDEFAKGLGLESLEQLRGLVKDQLANEHTTASRSKAKRDLL 296
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD+P +V+ E+ I Q+++ EM + + +E Y +A+RRV
Sbjct: 297 DKLDAAHDFDLPPGMVDQEFEQIWQQLQREMDAGRVSDEEKAKPEETLRDEYRKIAERRV 356
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL +G ++ ++E E+ AL ++ ++PG E++++ FQK PNA+A+LRAPI+E
Sbjct: 357 RLGLVLAEVGRIADVRISEAEVNQALIREARQYPGQEREVVQFFQKNPNAMAQLRAPIYE 416
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
DKV+DHIL++ ++ ++ VT ++LF E
Sbjct: 417 DKVVDHILETAKVEEKTVTREELFAEDEE 445
>gi|225627388|ref|ZP_03785425.1| trigger factor [Brucella ceti str. Cudo]
gi|225617393|gb|EEH14438.1| trigger factor [Brucella ceti str. Cudo]
Length = 504
Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats.
Identities = 170/447 (38%), Positives = 284/447 (63%), Gaps = 1/447 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 9 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 69 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 128 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 188 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 248 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 307
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 308 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 367
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 368 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 427
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSE 447
V+DH+L ++ + D+KV+ ++L +
Sbjct: 428 VVDHLLANINVTDKKVSKEELTAEDED 454
>gi|118574084|sp|Q2RU46|TIG_RHORT RecName: Full=Trigger factor; Short=TF
Length = 447
Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 125/452 (27%), Positives = 244/452 (53%), Gaps = 10/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +E LKRE ++IP+ + + R+E+++ + + GFRPGKVP+S ++ +GK
Sbjct: 1 MQVTETVNESLKREYKIVIPAADIAERSARRLEELKGQMRLPGFRPGKVPMSMLRQRFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L E +++ ++E + E+++ + + A +P I + +E D++ L+ ++
Sbjct: 61 SVLGEVLEKAVQESIREVMTSHELKPATQPDIDLIS--------EVEEGKDVEFTLALEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP+I + F L + +++ EV ++I+ + + + + E + GD V +D+
Sbjct: 113 LPEIGETDFSALALEREVAEVAAEKIEEALETLRQQSKTHEPVTDGRAAAGGDLVVIDFI 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E S + +GS + L+G G+ + + FPED+ LAGK
Sbjct: 173 GKLDGEAFEGGSAEAYDLELGSNSFIPGFEDQLIGATAGEARTVTVSFPEDYPAAHLAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++KEV + +++DLA G ES A+R ++ + + + K+KR++L
Sbjct: 233 ETVFDVTVKEVKQAVVPELDDDLAKAFGKESAEALREAVKADLQGELDEVSKTKLKRKLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D +++ + F VP++LV+ E+ GI ++ + ++ DE+ Y +A+RRV
Sbjct: 293 DALADGHDFPVPQTLVDAEFEGIWAQIEKAKTDGQLDEEDAAKSDEDLRADYRKIAERRV 352
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G++ + V +E++ AL ++L RFPG E ++++++ A+ LRAP+FE
Sbjct: 353 RLGLLLADVGQRAQVTVAQEDLNKALMRELRRFPGQEAAVINYYRNNQQAMDNLRAPVFE 412
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV HIL + D+ V+ + L + E +
Sbjct: 413 DKVCAHILALATVTDKPVSVEDLMKDPDEDAT 444
>gi|220927142|ref|YP_002502444.1| trigger factor [Methylobacterium nodulans ORS 2060]
gi|254789010|sp|B8IN25|TIG_METNO RecName: Full=Trigger factor; Short=TF
gi|219951749|gb|ACL62141.1| trigger factor [Methylobacterium nodulans ORS 2060]
Length = 473
Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 139/475 (29%), Positives = 268/475 (56%), Gaps = 6/475 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGL RE V++ + L D + ++ K +KGFRPGKVP++H++ +YG+
Sbjct: 1 MQVTETKSEGLMREFQVVLAAAELEDRLATELAGLKDKVQLKGFRPGKVPVAHLRRVYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+++ + + E +IL + + A+ P I + E +++I ++ DL +++ ++
Sbjct: 61 SIMADVVQNAVNEANQKILEENKLKLALEPRIEMPEDKAEIEKA-LDAKADLSFKVALEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
+P ++ D+ +T+ + V ++E+D + +A+ N ++ + +E GD+V +D+
Sbjct: 120 MPTFDLVDHSDITLTKPVAAVADEEVDAALTRMAEQNRSYSDRPEGAAAETGDRVVIDFV 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + + S ++ +GS + L+G K G+Q+ + FP+D+ + LAGK
Sbjct: 180 GRIDGEVFQGGSAEDANLDLGSNTFIPGFEDQLLGAKAGEQRTVTVTFPQDYPAEQLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K V +P ++++LA G ES ++ + + R++VK+ +L
Sbjct: 240 EAVFDVTVKAVQAPGEATIDDELAKTFGLESLDKLKEAVRTSLSAELDAQSRRRVKKALL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + ++Y FD+P +LV E+ + +V ++ S + ++ + +E+ Y +A+RRV
Sbjct: 300 DALDSRYAFDLPPTLVHQEFAAVWAQVENDLKSRGKSFEDEGTTEEKAQSEYRRIAERRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL +GE +I+V +EE+ AL +L +FPG E+++ D ++K P A+AELRAP+FE
Sbjct: 360 RLGLVLAQVGESADIKVPDEEVNQALIARLRQFPGREREVYDFYRKNPQAMAELRAPLFE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
+KV+DH+L V++V+ V+ + LF ++ E + E S E +E S
Sbjct: 420 EKVVDHVLGQVKLVEEPVSKEALF---ADDEDEAAPAAETASEAGASPETKTETS 471
>gi|307942061|ref|ZP_07657412.1| trigger factor [Roseibium sp. TrichSKD4]
gi|307774347|gb|EFO33557.1| trigger factor [Roseibium sp. TrichSKD4]
Length = 457
Score = 277 bits (707), Expect = 3e-72, Method: Composition-based stats.
Identities = 166/452 (36%), Positives = 278/452 (61%), Gaps = 3/452 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKREL + IP+ L + ++D++SKA IKGFRPGKVP++H+K +YG+
Sbjct: 9 MQVTETLAEGLKRELKIEIPAGDLASKLDAYMDDMKSKAQIKGFRPGKVPVAHLKKMYGR 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++E + I+E + + R ER A+ P I + E + ++ G DL ++SYDI
Sbjct: 69 QAMAEILSNTIQETTQKAIEDRKERPALNPDIDLPE---EDAEKILAGDADLSFKMSYDI 125
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP E+ F +++ + + EV E E+D ++ +IA+N+ F+ KE +E GD+V++ Y
Sbjct: 126 LPDFEVVDFSGIEIERPVVEVAEAEVDERINDIAQNSKPFDTKEGAAEDGDRVSMSYVGK 185
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +N Q ++GS E LVG+K GD+K I+ FPED+ LAGK
Sbjct: 186 IDGEAFEGGADENGQLVLGSGQFIPGFEEQLVGIKAGDEKTIDVTFPEDYPAAHLAGKTA 245
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ + KE+ +P V ++++ A LG ES ++ + +I+ + RQ+VKRQ+LD
Sbjct: 246 QFDVVAKEIAAPGEVTLDDEFAKGLGLESLDNLKEVIRSQIESQFGQMTRQRVKRQLLDK 305
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ YTFD+P+ L+++E+ + ++V +M + ++ ++ +E + Y +A+RRV
Sbjct: 306 LDETYTFDLPQRLLDSEFEVVWKQVEEDMQRNEKTFEDENTTEEAAREEYRKIAERRVRL 365
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL +GEKNNI+VT+EEMQ ALY ++ +FPG E+++ + ++ ALA LRAPI+E+K
Sbjct: 366 GLVLSEVGEKNNIQVTDEEMQRALYDRVRQFPGQEQQVFEFYKNNQQALASLRAPIYEEK 425
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
V+D IL+ ++ D+ VT ++L +E +
Sbjct: 426 VVDFILELAKVSDKTVTKEELEKLVAEDEDDA 457
>gi|171769751|sp|A7HY57|TIG_PARL1 RecName: Full=Trigger factor; Short=TF
Length = 511
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 152/449 (33%), Positives = 263/449 (58%), Gaps = 6/449 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV ++GLKREL V +PS L ++++++++ +KGFRPGKVP+SH++ +GK
Sbjct: 1 MQVTVTNADGLKRELKVQVPSQELEAKLGAKLDEMKNQVRLKGFRPGKVPVSHLRKTFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + I E + E + L R A +PSI + D+ G DL ++S+++
Sbjct: 61 QVMGDVIQETVGESSQQALQDESLRPAFQPSIDLEGEIQDVLDGK----ADLTFKMSFEV 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
+P E+S F + + + EV +++ID + +A+N FE +E ++E GD +T+D+
Sbjct: 117 IPAFELSDFSKVSLERLTAEVKDEDIDVALKRLAENQKNFEPREEGAKAETGDLLTIDFV 176
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E S ++ +GS E LVG+K GD+ +++ FP D+ + LAGK
Sbjct: 177 GKIDGEAFEGGSAEDANLEIGSGRFIPGFEEQLVGVKVGDETQVKVAFPADYGAEHLAGK 236
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +KEV +P V ++++LA R G ES +R +++K + R +KR +L
Sbjct: 237 DAVFDVKVKEVKAPAEVKLDDELAKRFGLESMEKLREALGEQMKGEYARMSRMHLKRAML 296
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + ++F++P ++VE E+ I Q+ E+S N+ + ++D +E+ Y +A+RRV
Sbjct: 297 DKLDELHSFELPPTMVEQEFQQIWQQFEHELSHQNKTAADLDEPEEDVRAEYRKIAERRV 356
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +GEKNNI VTE+E+ AL ++ +FPG E+++ +FQ+ P A+ ELRAPIFE
Sbjct: 357 RLGLLLAEVGEKNNITVTEQELNQALAERARQFPGQEQQLYRYFQQNPQAIQELRAPIFE 416
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
DKV+D I + ++ D+ V+ D+LF +
Sbjct: 417 DKVVDFIAELAKVEDKVVSRDELFADPDA 445
>gi|254503281|ref|ZP_05115432.1| trigger factor [Labrenzia alexandrii DFL-11]
gi|222439352|gb|EEE46031.1| trigger factor [Labrenzia alexandrii DFL-11]
Length = 460
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 168/449 (37%), Positives = 279/449 (62%), Gaps = 3/449 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKREL + IP+ L ++ + D++SKANIKGFRPGKVP++H+K +YG+
Sbjct: 12 MQVTETLAEGLKRELKIDIPAGDLAVKLDDYLNDMKSKANIKGFRPGKVPVAHLKKMYGR 71
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++E + I+E + + +R ER A+ P I + E + ++ G DL +++YD+
Sbjct: 72 QAMAEILSNTIQETTQKAVEERSERPALTPEIDLPE---EDAEKILAGDADLSFKMTYDV 128
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP EI F ++ + + E+ E+E+D Q+++IAKNN FE K+ +E GD+VT+ Y
Sbjct: 129 LPNFEIVDFGGFEIERPVVEIAEEEVDTQVSDIAKNNTPFEAKDGAAEDGDRVTMSYLGK 188
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +N Q ++GS E L+G K GD+K +E FPE++ LAGK
Sbjct: 189 IDGEPFEGGADENGQLVLGSGQFIPGFEEQLIGTKAGDEKVVEVTFPEEYPAAHLAGKAA 248
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KE+ +P ++++ A LG ES ++ + +I+ + RQ+VKRQ+LD
Sbjct: 249 TFDVVVKEIGAPGEAAIDDEFAKGLGLESLDKLKEIVRGQIEGQFGQMTRQRVKRQLLDK 308
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+F++PE L+E+E+ + Q+V +M + ++ ++ +EE Y +A+RRV
Sbjct: 309 LDEHYSFELPEKLLESEFQIVWQQVEEDMKRNEKTFEDEETTEEEAKAEYRKIAERRVRL 368
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEKNNI+VT+EEMQ ALY ++ +FPG E+++ + ++ ALA LRAPI+E+K
Sbjct: 369 GLVLSEIGEKNNIQVTDEEMQRALYDRVRQFPGQEQQVFEFYKNNQQALASLRAPIYEEK 428
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESS 449
V+D +L+ ++ D+ VT ++L + +E
Sbjct: 429 VVDFMLELAKVTDKTVTKEELENLVAEDE 457
>gi|260168629|ref|ZP_05755440.1| trigger factor [Brucella sp. F5/99]
gi|261758102|ref|ZP_06001811.1| trigger factor [Brucella sp. F5/99]
gi|261738086|gb|EEY26082.1| trigger factor [Brucella sp. F5/99]
Length = 496
Score = 276 bits (706), Expect = 5e-72, Method: Composition-based stats.
Identities = 170/447 (38%), Positives = 284/447 (63%), Gaps = 1/447 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSE 447
V+DH+L ++ + D+KV+ ++L +
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDED 446
>gi|154253673|ref|YP_001414497.1| trigger factor [Parvibaculum lavamentivorans DS-1]
gi|154157623|gb|ABS64840.1| trigger factor [Parvibaculum lavamentivorans DS-1]
Length = 512
Score = 276 bits (705), Expect = 5e-72, Method: Composition-based stats.
Identities = 152/449 (33%), Positives = 263/449 (58%), Gaps = 6/449 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV ++GLKREL V +PS L ++++++++ +KGFRPGKVP+SH++ +GK
Sbjct: 2 MQVTVTNADGLKRELKVQVPSQELEAKLGAKLDEMKNQVRLKGFRPGKVPVSHLRKTFGK 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + I E + E + L R A +PSI + D+ G DL ++S+++
Sbjct: 62 QVMGDVIQETVGESSQQALQDESLRPAFQPSIDLEGEIQDVLDGK----ADLTFKMSFEV 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
+P E+S F + + + EV +++ID + +A+N FE +E ++E GD +T+D+
Sbjct: 118 IPAFELSDFSKVSLERLTAEVKDEDIDVALKRLAENQKNFEPREEGAKAETGDLLTIDFV 177
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E S ++ +GS E LVG+K GD+ +++ FP D+ + LAGK
Sbjct: 178 GKIDGEAFEGGSAEDANLEIGSGRFIPGFEEQLVGVKVGDETQVKVAFPADYGAEHLAGK 237
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +KEV +P V ++++LA R G ES +R +++K + R +KR +L
Sbjct: 238 DAVFDVKVKEVKAPAEVKLDDELAKRFGLESMEKLREALGEQMKGEYARMSRMHLKRAML 297
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + ++F++P ++VE E+ I Q+ E+S N+ + ++D +E+ Y +A+RRV
Sbjct: 298 DKLDELHSFELPPTMVEQEFQQIWQQFEHELSHQNKTAADLDEPEEDVRAEYRKIAERRV 357
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +GEKNNI VTE+E+ AL ++ +FPG E+++ +FQ+ P A+ ELRAPIFE
Sbjct: 358 RLGLLLAEVGEKNNITVTEQELNQALAERARQFPGQEQQLYRYFQQNPQAIQELRAPIFE 417
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
DKV+D I + ++ D+ V+ D+LF +
Sbjct: 418 DKVVDFIAELAKVEDKVVSRDELFADPDA 446
>gi|58038576|ref|YP_190540.1| trigger factor [Gluconobacter oxydans 621H]
gi|67461608|sp|Q5FUR2|TIG_GLUOX RecName: Full=Trigger factor; Short=TF
gi|58000990|gb|AAW59884.1| Trigger factor [Gluconobacter oxydans 621H]
Length = 443
Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 129/450 (28%), Positives = 243/450 (54%), Gaps = 10/450 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV +EGLKR V++PS L + R+ ++ + GFRPGKVP S +K YG+
Sbjct: 1 MQVTPTLNEGLKRAFTVVVPSADLQARRDARLAEVAKTIKLPGFRPGKVPASLVKQRYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +E ++E + + ++ ++ R AM+P I + IE DL+ ++ ++
Sbjct: 61 SVNAELLEEAVNDATAKLFEEQKIRPAMQPKIEVVS--------AIEDGKDLEFKVETEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
LP+IE+ L++T+ +V E+ +D+ + ++A+ + FE ++ + GD + VD+
Sbjct: 113 LPEIEVPDLSGLKLTRLGAKVSEETVDKALNDVARRSRKFETIEEDRPAAKGDVLCVDFV 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + + +V +G E + G+K G+++ I FP D+ ++LAGK
Sbjct: 173 GKLDGTPFDGGTADDVNVEIGGEGFIPGFAEQMEGMKAGEERVINVTFPADYQAEELAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V + K + + ++++LA +GFE+ +R + +++ + + L R ++KR +L
Sbjct: 233 AVTFDIKAKSLKKAVDPAIDDELAKTIGFENLEQIRKIITEQAEGEYQQLSRLRIKRDLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D +S K F+ P S+V+ E+N I +V + ++ +E Y +A+RRV
Sbjct: 293 DALSEKTDFEAPSSMVDAEFNQIWARVEEDRKVGRLDEEDAGKDEETLKADYRRIAERRV 352
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG K I+V+ EE+ A+ Q+ R+PG E+ + + F K P A+ LR PI E
Sbjct: 353 KLGLLLAEIGRKQEIQVSREELLGAMQQEARRYPGQEQMVFEFFSKNPQAVEGLRGPILE 412
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
+KV+D++++ + D++VT ++L +
Sbjct: 413 NKVVDYLIELADVTDKEVTPEELAEIPPAE 442
>gi|316933820|ref|YP_004108802.1| trigger factor [Rhodopseudomonas palustris DX-1]
gi|315601534|gb|ADU44069.1| trigger factor [Rhodopseudomonas palustris DX-1]
Length = 452
Score = 274 bits (699), Expect = 2e-71, Method: Composition-based stats.
Identities = 144/452 (31%), Positives = 264/452 (58%), Gaps = 3/452 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E ++GLKRE V +P+ + ER+ D++ K + GFRPGKVP +H+K +YG+
Sbjct: 1 MQVKETVADGLKREFQVSVPAADIDAKVGERLADLKDKVRLNGFRPGKVPTAHLKRVYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +ETID+++++ I S+R R A P IT+ + + +I +EG DL ++ ++
Sbjct: 61 SVAAETIDKLVRDTNDGIFSERGFRLATEPKITMPQDQKEIEDI-LEGKSDLTYTVAIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
+P IE++ F V + + EV E ++D + IA+ N ++ + + ++E GD+VTV +
Sbjct: 120 VPAIELADFKSFSVEKPVVEVAESDVDDAIKRIAEANRSYADKAEGAKAEAGDRVTVSFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D V + + +++ ++GSA + LVG+ G+ + I+ FP +++ LAGK
Sbjct: 180 GTIDGVAFDGGTGEDIPVVIGSASFIPGFEDQLVGIAVGETRTIKVTFPTNYASDTLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +P ++++ A LG ES ++ ++ R KVKRQ+L
Sbjct: 240 PAEFETTATKLEAPQETTIDDEFAKTLGMESLDKLKEAAKARLAAEYAGASRLKVKRQLL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD P SL+E E+ + + + EM S + + ++ ++ + Y +A RRV
Sbjct: 300 DRLDEAHKFDAPPSLIEQEFEVMWRSINAEMQSTGKTFADENTTEDAAKEEYRKIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IGEKN I+VT++E+ A+ ++ + PG EK++ D+++ P A+A+LRAPI+E
Sbjct: 360 RLGLVLSEIGEKNKIQVTDDEVSRAVIERARQMPGREKEVWDYYRSNPEAVAQLRAPIYE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D IL+ + ++ VT ++L+ + + +
Sbjct: 420 DKVVDFILELANVTEKPVTREELYKDEDDKTA 451
>gi|192291682|ref|YP_001992287.1| trigger factor [Rhodopseudomonas palustris TIE-1]
gi|238692571|sp|B3Q7P6|TIG_RHOPT RecName: Full=Trigger factor; Short=TF
gi|192285431|gb|ACF01812.1| trigger factor [Rhodopseudomonas palustris TIE-1]
Length = 452
Score = 274 bits (699), Expect = 3e-71, Method: Composition-based stats.
Identities = 144/452 (31%), Positives = 265/452 (58%), Gaps = 3/452 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E ++GLKRE V +P+ + +E++ D++ K + GFRPGKVP +H+K +YG+
Sbjct: 1 MQVKETVADGLKREFQVNVPAADIDAKIDEKLADLKDKVRLNGFRPGKVPTAHLKRVYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +ETID+++++ I S+R R A P IT+ + + +I +EG DL ++ ++
Sbjct: 61 SVAAETIDKLVRDTNDGIFSERGFRLATEPKITMPQDQKEIEDI-LEGKSDLTYTVAIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
+P IE++ F V + + +V + ++D + IA N A+ + + ++E GD+VTV +
Sbjct: 120 VPAIELADFKSFSVEKPVVDVADSDVDEAIKRIADANRAYADKAEGAKAETGDRVTVSFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D V + + +++ ++GSA + LVG+ G+ + I+ FP +++ + LAGK
Sbjct: 180 GTIDGVAFDGGTGEDIPVVIGSASFIPGFEDQLVGIAVGETRTIKVTFPANYASETLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +P ++++ A LG ES ++ ++ R KVKRQ+L
Sbjct: 240 PAEFETTATKLEAPQETTIDDEFAKTLGLESLDKLKEAAKARLGAEYAGASRLKVKRQLL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD P SL+E E+ + + + EM S + + ++ ++ + Y +A RRV
Sbjct: 300 DRLDEAHKFDAPPSLIEQEFEVMWRSINAEMQSTGKTFADENTTEDAAKEEYRKIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IGEKN I+VT++E+ A+ ++ + PG EK++ D ++ P ALA+LRAPI+E
Sbjct: 360 RLGLVLSEIGEKNKIQVTDDEVSRAVIERARQMPGREKEVWDFYRSNPEALAQLRAPIYE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D IL+ + ++KVT ++L+ + + +
Sbjct: 420 DKVVDFILELANVTEKKVTREELYKDEDDKTA 451
>gi|330994048|ref|ZP_08317978.1| Trigger factor [Gluconacetobacter sp. SXCC-1]
gi|329758994|gb|EGG75508.1| Trigger factor [Gluconacetobacter sp. SXCC-1]
Length = 445
Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 139/450 (30%), Positives = 247/450 (54%), Gaps = 8/450 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E S+GLKR V +P+ + R++++ + GFRPGKVP+S ++ +G+
Sbjct: 1 MQVTETLSDGLKRGFTVTVPAAEIESKRTARLKEVGQSMKLPGFRPGKVPMSILQQRFGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++++ E +L +R R AM+P + + G DL +++++
Sbjct: 61 SVQGEVLEQVVSEATRTLLDERGLRPAMQPQVDLVSG------SEPGSKADLVFTVAFEL 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
LP+I I L + + EV+ + +D+ + EIA FE ++ + GD VTVD+
Sbjct: 115 LPEITIPDLSTLSLVRLKAEVNAETVDKALEEIAGRQREFEKVEEDRPAADGDVVTVDFV 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E S +V +G A E +VG+K GD+K I FP D+ + LAGK
Sbjct: 175 GKIDGTAFEGGSADDVNVELGGAGFIPGFAEQIVGMKAGDEKVITVTFPADYGAEHLAGK 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +KE+ + ++++LA +LGFE +R L ++++ Q E L R ++KR++L
Sbjct: 235 EANFDIKVKELKRSVEAKIDDELAKKLGFEGLEQVRELITKQVGQEYEQLSRLRLKRELL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ K F+ P +VE E++ I ++ + + ++ D ++ Y +A+RRV
Sbjct: 295 DRLAEKTDFEAPPGMVEAEFSQIWNRIEEDRKAGRLDEEDKDKDEDTLRADYRKIAERRV 354
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG NNI VT++E+ A+ + R+PG E+ + ++F K P A+ LR PIFE
Sbjct: 355 KLGLLLAEIGRVNNITVTQDEIVHAVRAEASRYPGQEQAVFEYFSKNPQAVDGLRGPIFE 414
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
+KVID+I++ ++ D+ VT ++L +
Sbjct: 415 NKVIDYIVELAKVEDKDVTPEELAEMPEAD 444
>gi|163868076|ref|YP_001609280.1| trigger factor [Bartonella tribocorum CIP 105476]
gi|189035930|sp|A9ISC1|TIG_BART1 RecName: Full=Trigger factor; Short=TF
gi|161017727|emb|CAK01285.1| trigger factor [Bartonella tribocorum CIP 105476]
Length = 475
Score = 273 bits (698), Expect = 3e-71, Method: Composition-based stats.
Identities = 174/471 (36%), Positives = 292/471 (61%), Gaps = 7/471 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ +++P+ L + NER++D + K + GFRPGKVP H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKIVVPAKDLEEKLNERLDDTKGKVRLNGFRPGKVPGGHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL+ R+ER AM+P I I D +++G D L Y++
Sbjct: 61 SFMAEILNEILNDAPRSILADRNERPAMQPKIDI-----DEDEKILDGKADFTFSLKYEV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+IEI +F+ ++V ++I + EK+ID Q+ + + + +KE SE GD+VT+DY
Sbjct: 116 LPKIEIKAFEHIEVIREIAAIPEKDIDEQVNRVLSSTRNYSLKEGSSEEGDRVTIDYLGK 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ V E + + Q I+GS E LVG+K GD K I FP+++S LAG++
Sbjct: 176 LEGVPFEGGADNDAQLILGSKQFIPGFEEQLVGVKAGDAKTISVKFPDNYSAVHLAGREA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K VF P + ++++ A ++G ES +R + +I+ + RQKVKRQILD
Sbjct: 236 EFDITVKAVFRPDELKIDDEAAKKVGLESLDRLREVVRGQIESQYGSMTRQKVKRQILDA 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F++PE L+E E+N I +V ++ A + ++ +E+ + YH+LA+RRV
Sbjct: 296 LDADYNFEIPEGLLEIEFNNIWAQVNDDLKKAGRSFEDEGVTEEKAREEYHVLAQRRVRL 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IG K ++V E+E+++A+++Q+ ++PG EK+++D F+K P A+ LRAPIFE+K
Sbjct: 356 GLVLSEIGMKVGVKVNEDELKAAVFEQVRQYPGQEKEIMDFFRKTPEAVENLRAPIFEEK 415
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSES--SPEKLLDKSSKVETFQSEEAP 469
VID++L +++ D++VT ++L E+ EK K S V+ +E+
Sbjct: 416 VIDYLLAQIKVTDKEVTIEELMKEYDETDVPEEKPAKKKSAVKEKSAEKTS 466
>gi|39936027|ref|NP_948303.1| trigger factor [Rhodopseudomonas palustris CGA009]
gi|67461784|sp|Q6N5L2|TIG_RHOPA RecName: Full=Trigger factor; Short=TF
gi|39649881|emb|CAE28403.1| putative trigger factor [Rhodopseudomonas palustris CGA009]
Length = 452
Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats.
Identities = 144/452 (31%), Positives = 265/452 (58%), Gaps = 3/452 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E ++GLKRE V +P+ + +E++ D++ K + GFRPGKVP +H+K +YG+
Sbjct: 1 MQVKETVADGLKREFQVNVPAADIDAKIDEKLADLKDKVRLNGFRPGKVPTAHLKRVYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +ETID+++++ I S+R R A P IT+ + + +I +EG DL ++ ++
Sbjct: 61 SVAAETIDKLVRDTNDGIFSERGFRLATEPKITMPQDQKEIEDI-LEGKSDLTYTVAIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
+P IE++ F V + + +V + ++D + IA N A+ + + ++E GD+VTV +
Sbjct: 120 VPAIELADFKSFSVEKPVVDVADSDVDEAIKRIADANRAYADKAEGAKAETGDRVTVSFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D V + + +++ ++GSA + LVG+ G+ + I+ FP +++ + LAGK
Sbjct: 180 GTIDGVAFDGGTGEDIPVVIGSASFIPGFEDQLVGIAVGETRTIKVTFPANYASETLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +P ++++ A LG ES ++ ++ R KVKRQ+L
Sbjct: 240 PAEFETTATKLEAPQETTIDDEFAKTLGLESLDKLKEAAKARLAAEYAGASRLKVKRQLL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD P SL+E E+ + + + EM S + + ++ ++ + Y +A RRV
Sbjct: 300 DRLDEAHKFDAPPSLIEQEFEVMWRSINAEMQSTGKTFADENTTEDAAKEEYRKIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IGEKN I+VT++E+ A+ ++ + PG EK++ D ++ P ALA+LRAPI+E
Sbjct: 360 RLGLVLSEIGEKNKIQVTDDEVSRAVIERARQMPGREKEVWDFYRSNPEALAQLRAPIYE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D IL+ + ++KVT ++L+ + + +
Sbjct: 420 DKVVDFILELANVTEKKVTREELYKDEDDKTA 451
>gi|146307077|ref|YP_001187542.1| trigger factor [Pseudomonas mendocina ymp]
gi|166229920|sp|A4XTZ4|TIG_PSEMY RecName: Full=Trigger factor; Short=TF
gi|145575278|gb|ABP84810.1| trigger factor [Pseudomonas mendocina ymp]
Length = 436
Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats.
Identities = 99/453 (21%), Positives = 216/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + V +P R+ N+R++ +A + GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVESTSALERRMTVGVPVERIETEVNKRLQQTARRAKVPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 AARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ FD + + + +V + ++D + + K N FE E +E GD++ +D+
Sbjct: 112 FPEFEVTGFDSIAIERLQADVADSDVDNMLDILRKQNTRFEAVERAAENGDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S K Q ++GS + + LVG+K G+++ I FPED+ DLAGK
Sbjct: 172 IDGEAFAGGSAKGTQLVLGSGRMIPGFEDALVGVKAGEERVINPTFPEDYQNLDLAGKTA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +P +N++ G + R + +++ ++ KVK Q++
Sbjct: 232 EFAVTVNSVSAPQLPELNDEFFALFGIKEGGLEGFRAEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ NE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPVEVPKALIGNEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ +++ E ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFDLKPDEARVRELIEEMASAY-QEPEQVVAWYYKNDQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V+++ + +
Sbjct: 404 EQVVDTVLQKANVTDKAVSYEDAVKPAEAPKAD 436
>gi|299135044|ref|ZP_07028235.1| trigger factor [Afipia sp. 1NLS2]
gi|298590021|gb|EFI50225.1| trigger factor [Afipia sp. 1NLS2]
Length = 452
Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats.
Identities = 140/452 (30%), Positives = 262/452 (57%), Gaps = 3/452 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLK E + IP+ + NER+ ++ K I GFRPGKVP++H+K +YGK
Sbjct: 1 MQVNETLSEGLKHEFQISIPAAEIDAKVNERLAGMKDKVRINGFRPGKVPVAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +ET++E I+E +I + R R A +T+ +++I G+++G DL ++ ++
Sbjct: 61 SVAAETLEETIRETNQKIFTDRGFRLANEAKVTMPTDQAEI-EGILDGKKDLNYSVAIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI--GDKVTVDYT 178
+P I ++ F +V + EV + ++D + +A + + K ++ D+VTV +
Sbjct: 120 VPPIALADFKTFKVEKQFAEVTDADLDDALKRVADQSRPYAAKAEGAKAEKDDRVTVSFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D V + + ++ ++GS + L+G+ G+ + ++ FP+++ +LAGK
Sbjct: 180 GTIDGVAFDGGTGSDIPVVLGSNSFIPGFEDQLIGIGAGETRTLKVQFPKNYGAANLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +P ++++ A LG ES ++ +++ Q RQ++KR++L
Sbjct: 240 DAEFETTASLIEAPQDAKIDDEFAKTLGLESLDKLKEAMRERLTQEFAGATRQRLKRELL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD PESLV +E++ + ++ EM S+ + + D+ +E+ + Y +A RRV
Sbjct: 300 DRLDETHKFDPPESLVNDEFDLMWNSIKAEMDSSGKTFADEDTTEEKAKEEYRKIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IG+KN I VT++E+ A+ ++ + PG EK++ D+++ P A+A+LRAPIFE
Sbjct: 360 RLGLVLSEIGDKNKITVTDDEVSRAVIERARQMPGREKEVWDYYRSNPGAVAQLRAPIFE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D IL+ Q+ ++KV+ ++L + +
Sbjct: 420 DKVVDFILELAQVTEKKVSREELLKEEDDKTA 451
>gi|27380056|ref|NP_771585.1| trigger factor [Bradyrhizobium japonicum USDA 110]
gi|41018212|sp|Q89KG0|TIG_BRAJA RecName: Full=Trigger factor; Short=TF
gi|27353210|dbj|BAC50210.1| trigger factor [Bradyrhizobium japonicum USDA 110]
Length = 453
Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats.
Identities = 139/450 (30%), Positives = 260/450 (57%), Gaps = 3/450 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLK E + +P++ L ++ D++ K I GFRPGKVP++H+K +YG+
Sbjct: 1 MQVTETLSEGLKHEFKISVPASDLDAKAGAKLVDLKDKVRINGFRPGKVPVAHLKKVYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++ETID+ I++ ++ S+R R A P IT+ ++++ L+ G DL ++ ++
Sbjct: 61 SVMAETIDQTIRDTNTQLFSERGFRLATEPKITMPSEQAEVEE-LLSGKTDLTYTVAIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
+P I ++ F QV + + +V + ++D + IA N + + ++E GD+VT+++
Sbjct: 120 VPSIALADFKTFQVEKPVADVTDADVDEAIKRIADTNRGYAAKADGAKAESGDRVTINFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+++ + E + + +Q ++GS E L G+ G+ + ++ FP+++ LAG+
Sbjct: 180 GTINGEVFEGGTGEGIQVVIGSNTFIPGFEEQLTGIGAGETRTLKVSFPKNYMNDKLAGQ 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +P + ++++ A LG ES ++ +++ RQ+VKR +L
Sbjct: 240 PAEFETTATSIEAPQDIAIDDEFAKTLGLESLDKLKEAARERLVAEFAGATRQRVKRALL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + F+ P SLV+ E+N + V+ EM SA + + D+ ++ + Y +A RRV
Sbjct: 300 DRLDEAHRFEAPPSLVDEEFNLMWNSVKAEMDSAGKTFADEDTTEDAAKEEYRKIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IGEKN I VT++E+ A+ ++ + PG EK++ D+++ ALA+LRAPI+E
Sbjct: 360 RLGLVLSEIGEKNKITVTDDEVGRAVIERARQMPGREKEVWDYYRSNAQALAQLRAPIYE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
DKV+D IL+ + ++KV+ + L+ +
Sbjct: 420 DKVVDFILELANVTEKKVSREDLYKDDEAE 449
>gi|298292195|ref|YP_003694134.1| trigger factor [Starkeya novella DSM 506]
gi|296928706|gb|ADH89515.1| trigger factor [Starkeya novella DSM 506]
Length = 450
Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats.
Identities = 150/450 (33%), Positives = 260/450 (57%), Gaps = 1/450 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE V++P+ L R+ +++ K + GFRPGKVP++H+K +YGK
Sbjct: 1 MQVTELLAEGLKREYRVVLPAAELDAKAQVRLNELKDKVRLNGFRPGKVPVAHLKRMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L+E ID+ + E +I+ + AM+P + + + E+ + +IEG DL ++ ++
Sbjct: 61 SVLAEVIDQAVNEANTKIVEDGGFKLAMQPKVELPQDEAAVNE-VIEGKADLSYTVNIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+IE+ F + + + + V ++E++ + IA+ N F KE +E GD+VTV + S
Sbjct: 120 LPKIELGDFKAISLEKPVLAVGDEEVEDTVKRIAEANRPFTAKEGAAENGDRVTVSFVGS 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S +++ ++GS E LVG+K + + + FPE + +LAGK
Sbjct: 180 IDGEKFEGGSGEDIPVVLGSNSFIPGFEEQLVGIKADETRTVNVTFPEAYQAANLAGKAA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ K + +P + ++++ A LG +S A++ +I Q R KVKR++LD
Sbjct: 240 SFEVTAKTIEAPGELNLDDEFAKTLGMDSLEALKEQVKSRIAQEHNAQSRNKVKRRLLDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + F+VP +L E E+ GI V EM + N+ + D+ +E Y +A+RRV
Sbjct: 300 LDGLHQFEVPPTLAEQEFQGIWDSVTSEMQAQNRTFADEDTTEEAARADYEKIAQRRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEKNNI+V+++E+ A+ ++ +FPG E+++ + ++ ALA LRAPIFE+K
Sbjct: 360 GLVLAEIGEKNNIQVSDDEVTRAVVERARQFPGQEQQVWEFYRNNAQALASLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
V+D +L+ ++ + VT ++L+
Sbjct: 420 VVDFLLELAKVKEVPVTREELYAEDEADKA 449
>gi|148553518|ref|YP_001261100.1| trigger factor [Sphingomonas wittichii RW1]
gi|166229941|sp|A5V3U6|TIG_SPHWW RecName: Full=Trigger factor; Short=TF
gi|148498708|gb|ABQ66962.1| trigger factor [Sphingomonas wittichii RW1]
Length = 551
Score = 272 bits (695), Expect = 8e-71, Method: Composition-based stats.
Identities = 136/458 (29%), Positives = 240/458 (52%), Gaps = 16/458 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ +E +EGLKR V IP+N + I+ I + + GFRPGKVP + IK ++G
Sbjct: 1 MQTVETLNEGLKRAYTVTIPANDVAQRVEAEIKSIAPQVRMPGFRPGKVPANLIKKMHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + +++ +++ V ++L+++ R AM+PS+ + G E D+ L++ ++
Sbjct: 61 AIEQDVLNKTVQDGVQQLLAEQKLRPAMQPSVELV-------GGDYEPGKDVALKVELEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE--TESEIGDKVTVDYT 178
LP + + + L++ + E EID Q+ IA ++ + + GD V +D+
Sbjct: 114 LPDVPPPAIEGLKLERLSVEAPTDEIDAQIKRIADQQKRYDDAKDGHPAVEGDLVVLDFA 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + + +GS L + L G+K G+ + + FP+D+ K LAGK
Sbjct: 174 GSVDGVAFEGGTGTGMSVELGSGRLIPGFEDQLEGIKKGESRSLNVTFPKDYGEKSLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +V P V+++ A LG + +R L +++Q L R +KR++L
Sbjct: 234 AAVFEVTATDVRVPGETKVDDEFAQSLGLQGLDQLRELIKGQVEQELNGLTRTHMKRKLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + F VP S+VE E+ I ++ E + + + E+D Y +A+RRV
Sbjct: 294 DQLAAGHDFPVPPSMVEAEFGQIWAQLEHEATHEEDP-EAARAEMEKDRDDYRAIAERRV 352
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELRAPIF 417
G++L IG++N +EV+ +EMQ + Q ++ P + + + Q+ P A A+LRAP++
Sbjct: 353 RLGLLLSEIGQQNGVEVSAQEMQRLVQQAAMQYQPADRDRFVQYLQQDPMAAAQLRAPLY 412
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
EDKV+D + ++ DR VT D+L E++ E D
Sbjct: 413 EDKVVDFLFDKAEVSDRTVTRDEL-----EAAIEADDD 445
>gi|188581622|ref|YP_001925067.1| trigger factor [Methylobacterium populi BJ001]
gi|238692871|sp|B1Z9C6|TIG_METPB RecName: Full=Trigger factor; Short=TF
gi|179345120|gb|ACB80532.1| trigger factor [Methylobacterium populi BJ001]
Length = 478
Score = 272 bits (694), Expect = 1e-70, Method: Composition-based stats.
Identities = 151/474 (31%), Positives = 274/474 (57%), Gaps = 3/474 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLKRE V++P+N L D N + +I+ K IKGFRPGKVP++H++ +YGK
Sbjct: 1 MQVTETTSEGLKREFQVLLPANELEDRLNTELSNIKGKVQIKGFRPGKVPVAHLRKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSIT-INEGESDITSGLIEGTVDLKLRLSYD 119
S++++ + + E +I+S + R A+ P I + E I ++ DL ++ +
Sbjct: 61 SVMADVLQNAVNEANQQIVSDKGLRLALEPQIEFPKDEEQTIIERALDAKGDLAFKVKLE 120
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDY 177
+LP E++ D+ + + + + ++E++ + +AK++ +FE +E E++ GD+VT+D+
Sbjct: 121 VLPSFELADLSDVSIKKLVLKPSDEEVNETLERMAKDSRSFEPREEGAEAQSGDRVTIDF 180
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D E ++V +GS + LVG K GD + ++ FP D+ + LAG
Sbjct: 181 VGRIDGTEFEGGKGEDVDLELGSNTFIPGFEDQLVGAKVGDARLVKVAFPADYQAEQLAG 240
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + ++K V +P ++++LA R G + ++ S+ + E R+K+K+++
Sbjct: 241 KDAEFDVTVKAVAAPGETKIDDELAKRFGMDDLEKLKEAVSKAVGADYEAQSRRKLKKEL 300
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + KY FD+P SLV E+ + +V ++ + + ++ + +E Y +A+RR
Sbjct: 301 LDALDGKYAFDLPPSLVHQEFAAVWAQVEQDLKNRGKTFEDEGTTEEASQAEYRKIAERR 360
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL +GE +I+V+++E+ AL+ ++ +FPG EK++ D ++ P ALAELRAP+F
Sbjct: 361 VRLGLVLAQVGETADIKVSDDEVNQALFARIRQFPGQEKQVYDFYRNNPQALAELRAPLF 420
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
E+KV+DH+L VQ+V+ V+ + LF E+ + + + S EA ++
Sbjct: 421 EEKVVDHVLGQVQVVEEPVSKEALFAEDDEADAVTGAAATDEKPSESSNEAAAD 474
>gi|170744617|ref|YP_001773272.1| trigger factor [Methylobacterium sp. 4-46]
gi|238688058|sp|B0UD17|TIG_METS4 RecName: Full=Trigger factor; Short=TF
gi|168198891|gb|ACA20838.1| trigger factor [Methylobacterium sp. 4-46]
Length = 485
Score = 272 bits (694), Expect = 1e-70, Method: Composition-based stats.
Identities = 133/444 (29%), Positives = 256/444 (57%), Gaps = 3/444 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLKRE V++ + L D + ++ K +KGFRPGKVP++H++ +YG+
Sbjct: 1 MQVTETKSEGLKREFQVVLAAAELEDRLTTELAGMKDKVQLKGFRPGKVPVAHLRRVYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+++ + + E +IL + + A+ P I + E +++I ++ DL +++ ++
Sbjct: 61 SIMADVVQNAVNEANQKILEENKLKLALEPQIKMPEDKAEIEKA-LDAKADLAFQVALEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
+P E+ D+ VT+ + V ++E++ + +A+ + ++ + +E GD+V +D+
Sbjct: 120 MPTFELQDHSDITVTKPVATVSDEEVETALKRMAEQSRSYADRPEGSAAETGDRVVIDFV 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ E S ++ +GS + L+G K G+ + + FPE + + LAGK
Sbjct: 180 GRIGGETFEGGSAEDADLDLGSNTFIPGFEDQLLGAKAGEARTVTVTFPEGYPAEHLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K V +P ++++LA G E+ A++ + + + R++VK+ +L
Sbjct: 240 EAVFDVTVKAVKAPGEAQIDDELAKTFGLENLDALKDAVRKSLANELDAQSRRRVKKALL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +Y FD+P +LV E+ + +V ++ S + ++ + +E+ Y +A+RRV
Sbjct: 300 DALDARYAFDLPPTLVHQEFAAVWAQVEADLKSRGKTFEDEGTTEEKAQGEYRRIAERRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL +GE +I+V +EE+ AL +L +FPG E+++ D ++K P A+AELRAP+FE
Sbjct: 360 RLGLVLAQVGETADIKVPDEEVNQALIARLRQFPGQEREVYDFYRKNPQAMAELRAPLFE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLF 442
+KV+DH+L V++V+ V+ + LF
Sbjct: 420 EKVVDHVLGQVKLVEEPVSKEALF 443
>gi|330503116|ref|YP_004379985.1| trigger factor [Pseudomonas mendocina NK-01]
gi|328917402|gb|AEB58233.1| trigger factor [Pseudomonas mendocina NK-01]
Length = 436
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 100/453 (22%), Positives = 216/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + V +P R+ N+R++ +A + GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVESTSALERRMTVGVPVERIETEVNKRLQQTARRAKVPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 AARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+S FD + + + +V + ++D + + K N FE E +E GD++ +D+
Sbjct: 112 FPEFEVSGFDSIAIERLQADVADSDVDNMLDILRKQNTRFEAVERAAENGDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S K Q ++GS + + LVG+K G+++ I FPED+ DLAGK
Sbjct: 172 IDGEAFAGGSAKGTQLVLGSGRMIPGFEDALVGVKAGEERVINPIFPEDYQNLDLAGKTA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +P +N++ G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNSVSAPQLPELNDEFFALFGIKEGGLEGFRAEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ NE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPVEVPKALIGNEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ +++ E ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFDLKPDETRVRELIEEMASAY-QEPEQVVAWYYKNDQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V+++ + +
Sbjct: 404 EQVVDTVLQKANVTDKAVSYEDAVKPAEAPKAD 436
>gi|302382852|ref|YP_003818675.1| trigger factor [Brevundimonas subvibrioides ATCC 15264]
gi|302193480|gb|ADL01052.1| trigger factor [Brevundimonas subvibrioides ATCC 15264]
Length = 447
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 134/450 (29%), Positives = 244/450 (54%), Gaps = 7/450 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV+EK +EGL R + V +P+ L+ + ++ + K +KGFRPGKVP+SH++ YG+
Sbjct: 1 MQVVEKSTEGLSRVITVTVPATELSAKLDAKLAEFAPKMKLKGFRPGKVPVSHVRKTYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E +++ I E + L + R A + + + +G DL ++ ++
Sbjct: 61 EMMGEIVNDTINETSQKALDEIKVRPAAPADMKLTSDMDKVLAGS----DDLAYEMALEV 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---EIGDKVTVDY 177
+P+ L++ + E + ++D + E+A +E K+ ++ GD++T+D+
Sbjct: 117 MPEFTPVDPKTLKLERPTYEASDADLDEALTELAGQAKNYEDKKGKAVKAADGDQLTIDF 176
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D E + ++ ++GS E L G K G++K IE FPED+ K+LAG
Sbjct: 177 LGKLDGEPFEGGAAEDADLVIGSNRFIPGFEEQLKGAKVGEEKTIEVTFPEDYQAKNLAG 236
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + +K + + P VV+ D A R+G ES ++ L + Q R K+KR +
Sbjct: 237 KLATFDVKVKAIKAEAPAVVDEDFAKRIGLESLDKLKELLRNNLNQQYAGQARFKLKRGL 296
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + +++FD+P +V+ E++ I Q+V + ++ N ++ D++ Y +A+RR
Sbjct: 297 LDVLDAQHSFDLPPKMVDAEFDDIWQQVEADKAAGNLPEEDAKKSDKDLKAEYRKIAERR 356
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL IG NN+ VT++E+ +A+ + +PG E+++LD +++ PNA A +RAPI+
Sbjct: 357 VRLGLVLAEIGRANNVGVTDQELNNAIMAEARNYPGQERQVLDFYRQNPNAAASMRAPIY 416
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
E+KV D I + D +T + L + E
Sbjct: 417 EEKVCDLIFSLADVTDTPITKEDLLKDDEE 446
>gi|326403119|ref|YP_004283200.1| trigger factor [Acidiphilium multivorum AIU301]
gi|325049980|dbj|BAJ80318.1| trigger factor [Acidiphilium multivorum AIU301]
Length = 440
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 133/449 (29%), Positives = 239/449 (53%), Gaps = 11/449 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR V++P + L++ +R+ ++ + GFRPGKVPLS ++ +G
Sbjct: 1 MQVTETLTEGLKRGFTVVVPGSDLSEKREKRLAELSKTMQMPGFRPGKVPLSMVRKRFGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ +E ++ + E +++ R R A++P + + E D DL+ + ++
Sbjct: 61 AVAAEVMEASVNEATERMINDRSLRPAVQPKVEVVRAEPD---------SDLEFTVELEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
LP++ I + +T+ V E EID +A A+ E ++ + GD +TVD+
Sbjct: 112 LPEVTIPDLKAISLTRPKAPVTEAEIDEAIARFAEQRAETEVVTEDRPAATGDILTVDFL 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E + + +G + E + G+K G+ K I FPE + DLAGK
Sbjct: 172 GKRDGVPFEGGAGTDTDIELGGSGFIPGFAEQMEGMKAGETKVITVTFPEQYHAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + K + + V+++ A GFE+ + R + +++Q R KVKR +L
Sbjct: 232 EATFDITAKALKRRVAPVIDDAFAEANGFENLTEFRKFFADRLEQSRAGASRLKVKRALL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + F P SLV+ E+ I ++V E + ++ +E Y +A+RRV
Sbjct: 292 DKLAEQADFPAPASLVDAEFAEIWRQVEAEKQAGRLDEEDAGKDEETLRADYRAIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ IG NN+++TE++M+ A+ ++ +FPG EK +++ +QK P AL LR PIFE
Sbjct: 352 RLGLLVAEIGRTNNVQITEQDMRRAMIAEMQQFPGQEKMIMEFYQKNPRALDRLRGPIFE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
DKV+D+ L+ + D +V+ + LF ++ +
Sbjct: 412 DKVVDYALELATVTDEEVSAEALFADTDD 440
>gi|163793181|ref|ZP_02187157.1| Trigger factor [alpha proteobacterium BAL199]
gi|159181827|gb|EDP66339.1| Trigger factor [alpha proteobacterium BAL199]
Length = 507
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 140/466 (30%), Positives = 250/466 (53%), Gaps = 33/466 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE +++P++ + N R+ ++ + ++ GFRPGKVP + +++ YG
Sbjct: 1 MQVNETLNEGLKREFTIVVPASEIDAELNGRLAELAPQMSLPGFRPGKVPPALLRARYGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L E +++ + +++R R A++P + I + DL+ +S ++
Sbjct: 61 SLLGEILEKAVNANTEMAMTERGLRPAVQPKVEIT---------AYDKGKDLEYTVSIEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
+P+I+ F L V + I +VD+K + + +A E + GD V +D+
Sbjct: 112 MPEIDPIDFASLSVERTIAKVDDKAVTEALERMAAQQKDSEPVADKRGAVDGDVVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E + ++ +GS +VG + G+ +++ FP+D+ LAGK
Sbjct: 172 GKIDGTPFEGGAAQDHHLELGSNSFIPGFEGQVVGAEVGESRDVTVSFPDDYQASHLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++KE+ +P PV +++ LA R G +S A+R ++++ R K KR +L
Sbjct: 232 EAVFSVTVKELRAPKPVSIDDALAQRFGLDSLDALRDAVREQMQGEFAEAARAKTKRSLL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ--------------------- 337
D ++++++F VP ++E EY GI+ +V A K
Sbjct: 292 DALADRHSFAVPAGMLEEEYRGIVHQVVAHGEGAEHKHDDDGHEGHDHEGHDHHDHSGHP 351
Query: 338 -NVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEK 396
+ I EE+ Y +A+RRV G++L +G NNI+VT++E+ +A+ Q RFPG EK
Sbjct: 352 SEDEKISEEERAEYRQIAERRVRLGLLLSEVGRMNNIQVTDDEVTNAIRSQAARFPGQEK 411
Query: 397 KMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLF 442
+ +++QK P ALA++RAP+FEDKV+D IL+ + D++VT +QLF
Sbjct: 412 FVFEYYQKNPQALAQVRAPLFEDKVVDFILEMATVTDKEVTPEQLF 457
>gi|261316033|ref|ZP_05955230.1| trigger factor [Brucella pinnipedialis M163/99/10]
gi|261305059|gb|EEY08556.1| trigger factor [Brucella pinnipedialis M163/99/10]
Length = 456
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 170/449 (37%), Positives = 286/449 (63%), Gaps = 1/449 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 9 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 69 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 128 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 188 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 248 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 307
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 308 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 367
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 368 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 427
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESS 449
V+DH+L ++ + D+KV+ ++L +++
Sbjct: 428 VVDHLLANINVTDKKVSKEELTAEDEDAA 456
>gi|209885038|ref|YP_002288895.1| trigger factor [Oligotropha carboxidovorans OM5]
gi|226738686|sp|B6JGU6|TIG_OLICO RecName: Full=Trigger factor; Short=TF
gi|209873234|gb|ACI93030.1| trigger factor [Oligotropha carboxidovorans OM5]
Length = 452
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 146/452 (32%), Positives = 264/452 (58%), Gaps = 3/452 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLK E + IP+ + NER+ ++ K + GFRPGKVP++H+K +YGK
Sbjct: 1 MQVNETLSEGLKHEFQISIPAAEIDAKVNERLAGMKDKVRLNGFRPGKVPVAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +ET++E I+E +I + R R A +T+ +++I G+++G DL ++ ++
Sbjct: 61 SVAAETLEETIRETNQKIFTDRGFRLANEAKVTMPTDQAEI-EGILDGKKDLTYSVAIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
+P I ++ F +V + + +V + E+D + IA N + + + ++E GD+VT+ +
Sbjct: 120 VPPITLADFKTFKVEKLVADVTDAEVDDAIKRIADQNRPYAPKSEGAKAENGDRVTLAFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D E S +N+ ++GS + L G+ G+ + I+ FP+++ LAGK
Sbjct: 180 GTIDGEAFEGGSGENIPLVLGSNSFIPGFEDQLTGIGVGETRVIKVPFPKNYGAAHLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +P ++++ A LG ES ++ +++ Q RQK+KR++L
Sbjct: 240 DAEFETTATLIEAPQDATIDDEFAKTLGVESLDKLKEAMRERLTQEYAGATRQKLKRELL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD PESLV +E++ + + + EM SA + + D+ ++E Y +A RRV
Sbjct: 300 DRLDETHKFDPPESLVNDEFDLMWKSIHAEMESAGKTFADEDTTEDEAKTEYRKIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IG+KN I VT++E+ A+ ++ + PG EK++ D+++ P A+A+LRAPIFE
Sbjct: 360 RLGLVLSEIGDKNKITVTDDEVSRAVIERARQMPGREKEVWDYYRSNPGAVAQLRAPIFE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D IL+ ++ ++KV+ ++LF + +
Sbjct: 420 DKVVDFILELAEVSEKKVSREELFKEEDDKAA 451
>gi|163851838|ref|YP_001639881.1| trigger factor [Methylobacterium extorquens PA1]
gi|218530630|ref|YP_002421446.1| trigger factor [Methylobacterium chloromethanicum CM4]
gi|240139002|ref|YP_002963477.1| Trigger factor (TF) [Methylobacterium extorquens AM1]
gi|254561597|ref|YP_003068692.1| Trigger factor [Methylobacterium extorquens DM4]
gi|226738685|sp|A9W5F4|TIG_METEP RecName: Full=Trigger factor; Short=TF
gi|254789009|sp|B7KNS9|TIG_METC4 RecName: Full=Trigger factor; Short=TF
gi|163663443|gb|ABY30810.1| trigger factor [Methylobacterium extorquens PA1]
gi|218522933|gb|ACK83518.1| trigger factor [Methylobacterium chloromethanicum CM4]
gi|240008974|gb|ACS40200.1| Trigger factor (TF) [Methylobacterium extorquens AM1]
gi|254268875|emb|CAX24836.1| Trigger factor (TF) [Methylobacterium extorquens DM4]
Length = 478
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 149/474 (31%), Positives = 274/474 (57%), Gaps = 3/474 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLKRE V++P+N L D N + +I+ K IKGFRPGKVP++H++ +YGK
Sbjct: 1 MQVTETTSEGLKREFQVLLPANELEDRLNTELSNIKGKVQIKGFRPGKVPVAHLRKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSIT-INEGESDITSGLIEGTVDLKLRLSYD 119
S++++ + + E +I++ + R A+ P I + E I ++ DL ++ +
Sbjct: 61 SVMADVLQNAVNEANQQIVTDKGLRLALEPQIEFPKDEEQTIIERALDAKGDLAFKVKLE 120
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDY 177
+LP E++ D+ + + + + ++E++ + +AK++ +FE +E E++ GD+VT+D+
Sbjct: 121 VLPSFELADLSDVSIKKLVLKPSDEEVNETLERMAKDSRSFEPREEGAEAQSGDRVTIDF 180
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D E ++V +GS + LVG K GD + ++ FP D+ + LAG
Sbjct: 181 VGRIDGTEFEGGKGEDVDLELGSNTFIPGFEDQLVGAKVGDSRLVKVAFPADYQAEQLAG 240
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + ++K V +P ++++LA R G + ++ S+ + E R+K+K+++
Sbjct: 241 KDAEFDVTVKAVAAPGETKIDDELAKRFGMDDLEKLKEAVSKAVGSDYEAQSRRKLKKEL 300
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + KY FD+P SLV E+ + +V ++ + + ++ + +E Y +A+RR
Sbjct: 301 LDALDGKYAFDLPPSLVHQEFAAVWAQVEQDLKTRGKTFEDEGTTEEASQAEYRKIAERR 360
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL +GE +I+V+++E+ AL+ ++ +FPG EK++ D ++ P ALAELRAP+F
Sbjct: 361 VRLGLVLAQVGETADIKVSDDEVNQALFARIRQFPGQEKQVYDFYRNNPQALAELRAPLF 420
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
E+KV+DH+L VQ+V+ V+ + LF E+ + + + + EA ++
Sbjct: 421 EEKVVDHVLGQVQVVEEPVSKEALFAEDDEADAVTGGAATDEKPSESNNEAAAD 474
>gi|319783920|ref|YP_004143396.1| trigger factor [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169808|gb|ADV13346.1| trigger factor [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 488
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 159/451 (35%), Positives = 272/451 (60%), Gaps = 2/451 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E + GLKRE+ + +P+ + R+ D R+K I GFRPGKVP+ H++ +YGK
Sbjct: 1 MQVTETLNSGLKREIKITVPAGDMEAKLMARLSDARNKVRINGFRPGKVPVQHLRKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + I++ R E+AAM+P + + E E + + G D + RL+Y+I
Sbjct: 61 SFMAEVVNEILNDSTRSIITGRGEKAAMQPEVIMTEDEKEAEKI-LAGGADFEFRLNYEI 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P IEI F D++VT+ + +V + EID Q+ +A++ ++E K ++ GD+VT+DY
Sbjct: 120 IPAIEIKDFSDIKVTRQVFDVPDAEIDEQVQRVAESARSYEPKTGKAANGDRVTIDYVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + + ++GS + + LVG K GD+K++ FPE++ LAGK+
Sbjct: 180 IDGEAFNGGAGTDQPLVLGSKEFIPGFEDQLVGAKAGDEKQVTVTFPENYQAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV P + +N++ A LG ES +R + +I+ + RQKVKRQ+LD
Sbjct: 240 TFDVTVKEVSQPGALEINDETAKNLGLESLERLRDVVRGQIENQFGAMTRQKVKRQLLDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+F+ P LV+ E+N I +V ++ +A + + ++ +EE Y LA+RRV
Sbjct: 300 LDAAYSFEAPSKLVDAEFNNIWAQVNRDLEAAGRTFADEETTEEEARAEYLRLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPG-HEKKMLDHFQKYPNALAELRAPIFED 419
G+VL IGEK + V++EE+Q L++Q+ R+PG ++++ + ++ P AL LRAP+FE+
Sbjct: 360 GLVLAEIGEKAGVTVSDEELQRGLFEQVRRYPGNQQQEVFEFYRNNPEALNTLRAPMFEE 419
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
KV+DH+L + + D KV+ ++L + E
Sbjct: 420 KVVDHLLGQISVTDVKVSKEELMADDEEDET 450
>gi|90423892|ref|YP_532262.1| trigger factor [Rhodopseudomonas palustris BisB18]
gi|119370928|sp|Q215J3|TIG_RHOPB RecName: Full=Trigger factor; Short=TF
gi|90105906|gb|ABD87943.1| trigger factor [Rhodopseudomonas palustris BisB18]
Length = 453
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 137/450 (30%), Positives = 265/450 (58%), Gaps = 3/450 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E ++GLKRE +V + + + R++D++ K + GFRPGKVP+ H+K +YG+
Sbjct: 1 MQVKETVADGLKREFEVTLQAADIGAKVAARLDDMKDKVRLNGFRPGKVPIGHLKRIYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +ET++++I+E +I ++R R A P IT+ E+++ + G DL ++ ++
Sbjct: 61 SVTAETVEKLIRETNDQIFTERGFRLATEPKITMPSKENEVEEI-LAGKSDLNYTVAVEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
+P IE++ F V + + EV + ++D + IA N ++ + + ++E GD+VT+ +
Sbjct: 120 VPTIELADFKSFSVEKPVAEVADSDVDEAINRIAMGNRSYADKGEGAKAESGDRVTISFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + + + +Q ++GSA + L+G+ G+ + ++ FP++++ +LAGK
Sbjct: 180 GTIDGTPFDGGTGEGIQVVIGSATFIPGFEDQLIGIGAGETRTLKVEFPKNYTNAELAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +P V++++ A LGFES ++ ++ RQ+VKR +L
Sbjct: 240 PAEFETTATVLEAPQESVIDDEFAKTLGFESLDKLKEAARGRLTAEYAGATRQRVKRVLL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + F+ P SLVE E++ + + ++ EM S + ++ ++ +E + Y +A RRV
Sbjct: 300 DRLDETHRFEAPPSLVEQEFDLMWRSIKAEMESGGKTFESENTTEEAAKEEYRKIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IGEKN I VT++E+ A+ ++ + PGHEK++ ++++ ALA+LRAPI+E
Sbjct: 360 RLGLVLSEIGEKNKITVTDDEVSRAVIERARQMPGHEKEVWEYYRNNAEALAQLRAPIYE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
DKV+D IL+ + ++ V+ ++L+ +
Sbjct: 420 DKVVDFILELANVTEKTVSREELYKDDDAE 449
>gi|256159621|ref|ZP_05457383.1| trigger factor [Brucella ceti M490/95/1]
gi|256254901|ref|ZP_05460437.1| trigger factor [Brucella ceti B1/94]
gi|261222083|ref|ZP_05936364.1| trigger factor [Brucella ceti B1/94]
gi|265998048|ref|ZP_06110605.1| trigger factor [Brucella ceti M490/95/1]
gi|260920667|gb|EEX87320.1| trigger factor [Brucella ceti B1/94]
gi|262552516|gb|EEZ08506.1| trigger factor [Brucella ceti M490/95/1]
Length = 482
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 170/447 (38%), Positives = 284/447 (63%), Gaps = 1/447 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSE 447
V+DH+L ++ + D+KV+ ++L +
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDED 446
>gi|300023470|ref|YP_003756081.1| trigger factor [Hyphomicrobium denitrificans ATCC 51888]
gi|299525291|gb|ADJ23760.1| trigger factor [Hyphomicrobium denitrificans ATCC 51888]
Length = 454
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 153/444 (34%), Positives = 263/444 (59%), Gaps = 1/444 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +GLKR L V++ L + F+ER+ +++ + IKGFR GKVP+ H+K LYGK
Sbjct: 1 MQVTETARDGLKRTLQVVVGKAELGERFSERLVELKDRVQIKGFRRGKVPMEHLKKLYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ E +++ I + + + R+ER A +P + + E ++ G DL + +++
Sbjct: 61 SLMQEVLEQTINDTSAKAVKDRNERPAQQPKLELLGVEDGGIERVVNGETDLSYTMDFEV 120
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYTV 179
LP I ++ LQ+ + + +VD+ +D+ ++++A+ N ++E +E + GD VT+++
Sbjct: 121 LPPIPVADLGVLQLEKLVADVDDSAVDKALSDLAERNTSYEPEEGRVASEGDLVTMNFVG 180
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D E S + +G E +VG+K GDQK + FPED+ + +LAGK
Sbjct: 181 RIDGEAFEGGSAEGANLAIGKKQFIPGFEEGVVGMKAGDQKVVTATFPEDYPMANLAGKA 240
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ S+ V P V+ D A LG E +RG + +IK+ + R K+KR+ILD
Sbjct: 241 ADFDVSVTAVAKPKKPEVDEDFAKGLGAEDLKTLRGFVTDQIKREYDQASRVKLKREILD 300
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + F++P SLV+ E+N I ++ + +AN+ + +E+ Y +A+RRV
Sbjct: 301 ALDKAHDFELPSSLVDFEFNNIWTQLENNLKAANKTIADEGKSEEDLRAEYRAIAERRVR 360
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G+V+G IGEKN ++V+++E++ AL +Q R+PG EK++ + ++K P AL ELRAPIFE+
Sbjct: 361 LGLVIGEIGEKNKLQVSQDELRRALVEQARRYPGREKQVYEFYEKTPGALNELRAPIFEE 420
Query: 420 KVIDHILKSVQIVDRKVTFDQLFD 443
KVIDH++ + V++KV+ D+L
Sbjct: 421 KVIDHVIAEAKPVEKKVSRDELLK 444
>gi|237803597|ref|ZP_04591182.1| trigger factor [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025579|gb|EGI05635.1| trigger factor [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 436
Score = 271 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 98/453 (21%), Positives = 214/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 GARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ FD + V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFDTIAVERLSADVADSDLDNMLEVLRKQNVRFEVTDRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S Q ++GS + + LVG K G+++ + FPED+ +LAGK
Sbjct: 172 VDGEVFAGGSATATQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLELAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFKQFGIKETGIDGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP+SL+ENE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKSLLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++ +++ + ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 ELGLIVAEVVKQFDLKPDDARVREMIQEMASAY-QEPEQVVAWYYKNEQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAPKAD 436
>gi|237807854|ref|YP_002892294.1| trigger factor [Tolumonas auensis DSM 9187]
gi|259533665|sp|C4LDB2|TIG_TOLAT RecName: Full=Trigger factor; Short=TF
gi|237500115|gb|ACQ92708.1| trigger factor [Tolumonas auensis DSM 9187]
Length = 436
Score = 271 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 216/451 (47%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P++++ +N R+ + I GFRPGK P + I+ +YG+
Sbjct: 1 MQVSVETTQGLERRLTITVPADKIEKEYNSRLNQVAKTRRIDGFRPGKAPKALIQKMYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+++ D +++ E L P++ N+ + D +S+++
Sbjct: 61 SIVADVADAVMQRHFVEALVAEKLNPVGAPTLEPNQ---------LVPGSDFTFTVSFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ + D ++V + + V + ++D+ + + K + ++ + + +V +D+ S
Sbjct: 112 YPEFKVQNLDAIKVEKPVATVSDADLDKMLTTLRKQHASWVDADEAAANDLRVNMDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + ++G+ + ++G K G+ +IE FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKAEGFALVLGAGRMIPGFEAGILGKKAGESFDIEVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V ++ + R G E +++ + +++ ++ +VK QIL
Sbjct: 232 KFAIKLNKVEKQDLPELDAEFIKRFGVEDGSVESLKAEIRKNMERELTQALKGQVKEQIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP++ V E + Q+ +AN ++ + + + A+RRV
Sbjct: 292 SGLLEQNLIDVPKAAVTREVEALRQQALQRFGAAN-----SKNVPQLPDELFQEQAERRV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + +I+ + +++ + + +++D++ + L +R E
Sbjct: 347 RVGLLLGEVIREQDIKADDARVKTLIESLATAY-EDPSEVVDYYFQNERLLNNMRDLAVE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
D+ I+ +L Q+ ++ +FD++ + + ++
Sbjct: 406 DQAIEFLLSQAQVTEKATSFDEVINKAGAAA 436
>gi|66044991|ref|YP_234832.1| trigger factor [Pseudomonas syringae pv. syringae B728a]
gi|75502668|sp|Q4ZVM8|TIG_PSEU2 RecName: Full=Trigger factor; Short=TF
gi|63255698|gb|AAY36794.1| Trigger factor [Pseudomonas syringae pv. syringae B728a]
Length = 436
Score = 271 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 97/453 (21%), Positives = 214/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 GARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ FD + V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFDSISVERLSADVADSDLDNMLEVLRKQNVRFEVTDRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S Q ++GS + + LVG K G+++ + FPED+ +LAGK
Sbjct: 172 VDGEVFAGGSATGTQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLELAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFKQFGIKETGIEGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++ +++ + ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 ELGLIVAEVVKQFDLKPDDARVREMIQEMASAY-QEPEQVVAWYYKNEQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAPKAD 436
>gi|167646811|ref|YP_001684474.1| trigger factor [Caulobacter sp. K31]
gi|167349241|gb|ABZ71976.1| trigger factor [Caulobacter sp. K31]
Length = 454
Score = 271 bits (691), Expect = 3e-70, Method: Composition-based stats.
Identities = 129/452 (28%), Positives = 245/452 (54%), Gaps = 7/452 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ++EK EGL R V +P++ L RI ++ + N+KGFRPGKVP +H++ LYGK
Sbjct: 3 MQIVEKSGEGLSRVYGVTVPASELATRLEARIAEVAPQMNVKGFRPGKVPTAHVRRLYGK 62
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E I+ + E ++L R A +P + + + +G DL L+ ++
Sbjct: 63 ALMGEVIEATLNEGAQKVLDDNKLRPAGQPDLKPSSDMDKVLAG----GEDLAFELAVEV 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---EIGDKVTVDY 177
+P+ E +++T+ + +V E E+D +A++AK +E ++ +S + GD++ +D+
Sbjct: 119 MPEFEPIDPASIELTKPVYKVSEAEVDEALADLAKQARTYEPRKGKSLKAKDGDQLLIDF 178
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
++D V + + + + +GS LVG K D ++ FP D+ +LAG
Sbjct: 179 VGTIDGVAFDGGTATDAELTLGSNQFIPGFEAQLVGAKPEDVVTVKVDFPADYQAANLAG 238
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K ++KEV +P+ +++LA RLG A++ L ++ R K+KR +
Sbjct: 239 KAAEFVTTVKEVRAPVDAAPDDELAKRLGLSDLQALKDLLKSNLEGRYGNSSRFKLKRAL 298
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + K+ F +P +V+ E+ GI Q+V+ + + ++ +++ Y +A+RR
Sbjct: 299 LDVLDTKHDFPLPPRMVDAEFAGIWQQVQADKTQGGLPPEDEGKTEDQLKDEYKKIAERR 358
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL IG KN++ VTE+E+ A+ ++ ++ +++ D +++ + A LRAPI+
Sbjct: 359 VRLGLVLAEIGRKNDVAVTEQELADAMMREARQYGAQAQQVFDMYRQRADLQAALRAPIY 418
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
EDKV+D I +I +++V+ ++L +
Sbjct: 419 EDKVVDLIFGKAKIEEKEVSKEELMEEDDLPE 450
>gi|330963321|gb|EGH63581.1| trigger factor [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 436
Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats.
Identities = 98/453 (21%), Positives = 215/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 GARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ FD + V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFDTIAVERLSADVADSDLDNMLEVLRKQNVRFEVADRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S Q ++GS + + LVG K G+++ + FPED+ DLAGK
Sbjct: 172 VDGEVFAGGSATATQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFKQFGIKETGIEGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++ +++ + ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 ELGLIVAEVVKQFDLKPDDARVREMIQEMASAY-QEPEQVVAWYYKNEQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ + +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAAKAD 436
>gi|289679414|ref|ZP_06500304.1| trigger factor [Pseudomonas syringae pv. syringae FF5]
gi|302187984|ref|ZP_07264657.1| trigger factor [Pseudomonas syringae pv. syringae 642]
gi|330897795|gb|EGH29214.1| trigger factor [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330939705|gb|EGH43000.1| trigger factor [Pseudomonas syringae pv. pisi str. 1704B]
gi|330952796|gb|EGH53056.1| trigger factor [Pseudomonas syringae Cit 7]
Length = 436
Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats.
Identities = 97/453 (21%), Positives = 214/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 GARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ FD + V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFDSISVERLSADVADSDLDNMLEVLRKQNVRFEVADRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S Q ++GS + + LVG K G+++ + FPED+ +LAGK
Sbjct: 172 VDGEVFAGGSATGTQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLELAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFKQFGIKETGIEGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++ +++ + ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 ELGLIVAEVVKQFDLKPDDARVREMIQEMASAY-QEPEQVVAWYYKNEQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAPKAD 436
>gi|162148816|ref|YP_001603277.1| trigger factor [Gluconacetobacter diazotrophicus PAl 5]
gi|209545436|ref|YP_002277665.1| trigger factor [Gluconacetobacter diazotrophicus PAl 5]
gi|189035940|sp|A9HRV7|TIG_GLUDA RecName: Full=Trigger factor; Short=TF
gi|161787393|emb|CAP56988.1| Trigger factor (TF) [Gluconacetobacter diazotrophicus PAl 5]
gi|209533113|gb|ACI53050.1| trigger factor [Gluconacetobacter diazotrophicus PAl 5]
Length = 445
Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats.
Identities = 136/450 (30%), Positives = 244/450 (54%), Gaps = 8/450 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E S GLKR V +P+ L R++++ N+ GFRPGKVPLS +K YG
Sbjct: 1 MQVTETLSAGLKRGFTVTVPAGELESKRTARLKELGQSMNLPGFRPGKVPLSIVKQRYGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E +++ + + ++ +R R AM+P + + + G DL+ ++ ++
Sbjct: 61 AVQGEVLEQAVSDATRALMDERGLRPAMQPRVDL------VAGAEPGGKADLEFKVEVEL 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I L +T+ D + ID+ + +IA FE E + GD V VD+
Sbjct: 115 LPDIAQPDLSTLSLTRLKATPDAETIDKALKDIASRQRDFETIEDVRPAAQGDVVVVDFV 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E + ++V +G A E + G+ G++K I FP D+S ++LAGK
Sbjct: 175 GKVDGVAFEGGTAQDVNVELGGAGFIPGFAEQIEGMSPGEEKVITVTFPADYSAENLAGK 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + K + P+ V +++++A ++GFE +R L +++++Q E L R ++KR++L
Sbjct: 235 EATFDITAKALKRPVDVEIDDEMAKKIGFEGLEQVRELITRQVEQEYEQLSRLRIKRELL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ K F+ P+ +VE E+ I Q+V + + ++ + ++ Y +A+RRV
Sbjct: 295 DALAEKTDFEAPQGMVEAEFAQIWQRVEADRKAGELDEEDKEKDEDTLRADYRKIAERRV 354
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG N I V+++EM A+ + R+PG E+++ + F+K P A LR PIFE
Sbjct: 355 KLGLLLAEIGRANAITVSQDEMLQAIRAEAMRYPGQEQQVFEFFRKNPQAAESLRGPIFE 414
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
+KV+D++++ + D+ VT ++L +
Sbjct: 415 NKVVDYVIELATVEDKDVTPEELAEIPPAD 444
>gi|330972590|gb|EGH72656.1| trigger factor [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 436
Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats.
Identities = 97/453 (21%), Positives = 214/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 GARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ FD + V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFDSISVERLSADVADSDLDNMLEVLRKQNVRFEVADRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S Q ++GS + + LVG K G+++ + FPED+ +LAGK
Sbjct: 172 VDGEVFAGGSATGTQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLELAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFKQFGIKETGIEGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++ +++ + ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 ELGLIVAEVVKQFDLKPNDARVREMIQEMASAY-QEPEQVVAWYYKNEQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAPKAD 436
>gi|148259927|ref|YP_001234054.1| trigger factor [Acidiphilium cryptum JF-5]
gi|166229007|sp|A5FX03|TIG_ACICJ RecName: Full=Trigger factor; Short=TF
gi|146401608|gb|ABQ30135.1| trigger factor [Acidiphilium cryptum JF-5]
Length = 440
Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 132/449 (29%), Positives = 239/449 (53%), Gaps = 11/449 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR V++P + L++ +R+ ++ + GFRPGKVPLS ++ +G
Sbjct: 1 MQVTETLTEGLKRGFTVVVPGSDLSEKREKRLAELSKTMQMPGFRPGKVPLSMVRKRFGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ +E ++ + E +++ R R A++P + + E D DL+ + ++
Sbjct: 61 AVAAEVMEASVNEATERMINDRSLRPAVQPKVEVVRAEPD---------SDLEFTVELEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
LP++ I + +T+ V E EID +A A+ E ++ + GD +TVD+
Sbjct: 112 LPEVTIPDLKAISLTRPKAPVTEAEIDEAIARFAEQRAETEVVTEDRPAATGDILTVDFL 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E + + +G + E + G+K G+ K I FPE + +LAGK
Sbjct: 172 GKRDGVPFEGGAGTDTDIELGGSGFIPGFAEQMEGMKAGETKVITVTFPEQYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + K + + V+++ A GFE+ + R + +++Q R KVKR +L
Sbjct: 232 EATFDITAKALKRRVAPVIDDAFAEANGFENLAEFRKFFADRLEQSRAGASRLKVKRALL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + F P SLV+ E+ I ++V E + ++ +E Y +A+RRV
Sbjct: 292 DKLAEQADFPAPASLVDAEFAEIWRQVEAEKQAGRLDEEDAGKDEETLRADYRAIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ IG NN+++TE++M+ A+ ++ +FPG EK +++ +QK P AL LR PIFE
Sbjct: 352 RLGLLVAEIGRTNNVQITEQDMRRAMIAEMQQFPGQEKMIMEFYQKNPRALDRLRGPIFE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
DKV+D+ L+ + D +V+ + LF ++ +
Sbjct: 412 DKVVDYALELATVTDEEVSAEALFADTDD 440
>gi|254708531|ref|ZP_05170359.1| trigger factor [Brucella pinnipedialis M163/99/10]
Length = 448
Score = 270 bits (689), Expect = 3e-70, Method: Composition-based stats.
Identities = 170/449 (37%), Positives = 286/449 (63%), Gaps = 1/449 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESS 449
V+DH+L ++ + D+KV+ ++L +++
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDEDAA 448
>gi|330808571|ref|YP_004353033.1| trigger factor [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327376679|gb|AEA68029.1| trigger factor [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 436
Score = 270 bits (689), Expect = 4e-70, Method: Composition-based stats.
Identities = 100/453 (22%), Positives = 217/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMSITVPAERIETQVNKRLQQTAQKAKIPGFRPGKVPMSVIRQRYEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A PS+ ++E DL+ ++++
Sbjct: 61 DARQEAVGDVIQSSFYEAVVEQKLNPAGAPSVEPK---------VLEKGKDLEFVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ F+ + V + +V + ++D+ + + K N FEV E ++ D++ +D+
Sbjct: 112 FPEFTVAGFESIAVERLSADVSDADLDKMLDILRKQNTRFEVTERAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S K Q ++GS + + LVG K G+++ + FPED+ DLAGK
Sbjct: 172 VDGEVFAGGSAKATQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFAQFGIKETGLEGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L++NE N + + + D+ + + AKRRV
Sbjct: 292 DGLLASNPIEVPKALLDNEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ ++ E ++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFELKPDEARVRELIQEMASAY-QEPEQVVSWYYKNDQQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKASVTDKAVSYEEAVKPVEAPQAD 436
>gi|28870882|ref|NP_793501.1| trigger factor [Pseudomonas syringae pv. tomato str. DC3000]
gi|213968833|ref|ZP_03396974.1| trigger factor [Pseudomonas syringae pv. tomato T1]
gi|301384121|ref|ZP_07232539.1| trigger factor [Pseudomonas syringae pv. tomato Max13]
gi|302059516|ref|ZP_07251057.1| trigger factor [Pseudomonas syringae pv. tomato K40]
gi|302135033|ref|ZP_07261023.1| trigger factor [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|41018205|sp|Q87YR5|TIG_PSESM RecName: Full=Trigger factor; Short=TF
gi|28854131|gb|AAO57196.1| trigger factor [Pseudomonas syringae pv. tomato str. DC3000]
gi|213926436|gb|EEB59990.1| trigger factor [Pseudomonas syringae pv. tomato T1]
Length = 436
Score = 270 bits (689), Expect = 4e-70, Method: Composition-based stats.
Identities = 98/453 (21%), Positives = 215/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 GARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ FD + V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFDTIAVERLSADVADSDLDNMLEVLRKQNVRFEVADRAAQNEDQLNIDFEGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S Q ++GS + + LVG K G+++ + FPED+ DLAGK
Sbjct: 172 VDGEVFAGGSATATQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFKQFGIKETGIEGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++ +++ + ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 ELGLIVAEVVKQFDLKPDDARVREMIQEMASAY-QEPEQVVAWYYKNEQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ + +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAAKAD 436
>gi|293392546|ref|ZP_06636866.1| trigger factor [Serratia odorifera DSM 4582]
gi|291424948|gb|EFE98157.1| trigger factor [Serratia odorifera DSM 4582]
Length = 434
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 88/450 (19%), Positives = 210/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R L + +P++ + + + + + I GFR GKVP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRLSITVPADTIKQAVKKELINAAKSVRIDGFRKGKVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPN---------YVPGEYKEGEDFNFSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV++ ++D + + K +++ + D+VTVD++ S
Sbjct: 112 YPEVELKGLESIEVEKPVVEVNDADVDTMLDTLRKQQASWKDTDRAVAAEDRVTVDFSGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + E LVG K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKASDFVLAMGQGRMIPGFEEGLVGHKAGEEFTIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + R G S +R + +++ + VR ++K Q +
Sbjct: 232 KFAIVLKKVEERELPELTEEFIKRFGVADGSVAGLRAEVRKNMERELKGAVRNRIKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANEIDVPAALIDGEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E+ +++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVISTHELKADEDRVKALIEEMASAY-EDPSEVVEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + + ++
Sbjct: 405 EQAVETLLAKAKVTEKATTFSELMNQTQQA 434
>gi|307129926|ref|YP_003881942.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Dickeya
dadantii 3937]
gi|306527455|gb|ADM97385.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Dickeya
dadantii 3937]
Length = 434
Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats.
Identities = 89/450 (19%), Positives = 211/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + ++ + ++ K I GFR GKVP ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIENAVKSELGNVAKKVRIDGFRKGKVPAKIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRHFVDAIIKEKINPAGAPN---------YVPGEYQVGGDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + +V E ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKGLDTIEVEKPLVDVSETDVDGMLDTLRKQQATWKETDRAATAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V E + +G + + +VG K GD+ IE FPED+ ++L G+
Sbjct: 172 VGGEEFEGGKASDFVLAMGQGRMIPGFEDGIVGHKAGDEFTIEVKFPEDYHAENLKGQDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + D R G + +R + +++ + +R +VK Q++
Sbjct: 232 KFAIVLKKVEERELPELTADFIKRFGVDDGSLDGLRAEVRKNMERELKGAIRNRVKSQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 DGLVKANDIDVPAALIDSEVDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ E+ + + + + ++++++++K + +R E
Sbjct: 346 VVGLLLGEVIASNELKADEDRVNVLIDEIASAY-EDPREVVEYYKKNKEMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ I+ +L ++V++ V+F++L + ++ +
Sbjct: 405 EQAIEALLSKAKVVEKAVSFNELMNQTTAA 434
>gi|17987352|ref|NP_539986.1| trigger factor [Brucella melitensis bv. 1 str. 16M]
gi|225852411|ref|YP_002732644.1| trigger factor [Brucella melitensis ATCC 23457]
gi|256369326|ref|YP_003106834.1| trigger factor [Brucella microti CCM 4915]
gi|297248248|ref|ZP_06931966.1| trigger factor tig [Brucella abortus bv. 5 str. B3196]
gi|17983037|gb|AAL52250.1| trigger factor, ppiase [Brucella melitensis bv. 1 str. 16M]
gi|225640776|gb|ACO00690.1| trigger factor [Brucella melitensis ATCC 23457]
gi|255999486|gb|ACU47885.1| trigger factor [Brucella microti CCM 4915]
gi|297175417|gb|EFH34764.1| trigger factor tig [Brucella abortus bv. 5 str. B3196]
Length = 485
Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats.
Identities = 173/471 (36%), Positives = 294/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 9 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 69 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 128 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 188 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 248 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 307
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 308 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 367
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 368 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 427
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 428 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAAPKKKAE 478
>gi|262362955|gb|ACY59676.1| Trigger factor [Yersinia pestis D106004]
Length = 434
Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats.
Identities = 84/450 (18%), Positives = 207/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + I GFR G VP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIEKAVKSELVKAAKNVRIDGFRKGHVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPN---------YVPGEYKQGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV++ ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKDLESIEVEKPVVEVNDADVDTMLETLRKQQATWKETDAAATAEDRATLDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + E ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKATDFVLAMGQGRMIPGFEEGVIGHKAGEEFTIDVNFPEDYHAENLKGKSA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + R G S +R + +++ + VR +VK Q +
Sbjct: 232 KFAIVLKKVEVRELPELTEEFIKRFGVADGSLAGLRAEVRKNMERELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +LV+ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANNIDVPTALVDGEIDVLRRQAAQRFGG------NEKQAAELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ ++ E+ +++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVISQHELKADEDRVKALIEEMASAY-EDPQEVIEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + ++ +
Sbjct: 405 EQAVETLLAKAKVTEKPTTFSELMNPTTAA 434
>gi|213521158|gb|ACJ50515.1| trigger factor [Pseudomonas fluorescens]
Length = 436
Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 221/453 (48%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R L + +P+ R+ + N+R++ KA I GFRPGKVP+S IK +G
Sbjct: 1 MQVSVENTTALERRLSITVPAERIETAVNKRLQQTAQKAKIAGFRPGKVPMSEIKRRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A PSI +E DL+ +++
Sbjct: 61 DARQEAVGDVIQASFYEAVVEQKLNPAGSPSIEPKS---------LEAGKDLEYVAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ FD +++ + EV + ++D + + K N FEV + ++ D++ +D+
Sbjct: 112 FPEFEVAGFDGIEIERLSAEVADSDLDNMLEILRKQNTRFEVADRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S K Q ++GS + + LVG K G+++ + FP D+ DLAGK
Sbjct: 172 VDGEVFAGGSAKGTQLVLGSNRMIPGFEDGLVGAKAGEERVLNLTFPADYQNLDLAGKTA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNSVSEPKLPELNEEFFAQFGIKETGIEGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ NE + + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLSNEVDRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ +++ E+ ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFDLKPDEDRVREMIQEMASAY-QEPEQVVAWYYKNEQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ ++ D+ V++++ + + +
Sbjct: 404 EQVVDTVLQKAKVTDKAVSYEEAVKPAEAAQAD 436
>gi|270263569|ref|ZP_06191838.1| trigger factor [Serratia odorifera 4Rx13]
gi|270042453|gb|EFA15548.1| trigger factor [Serratia odorifera 4Rx13]
Length = 434
Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats.
Identities = 88/450 (19%), Positives = 209/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R L + +P++ + + + + I GFR G VP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRLSITVPADTINQAVKKELIKAAKSVRIDGFRKGHVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E ++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGEAMQRSFVDAIIKEKINPAGAPN---------YVPGEYKEGEDFTFAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + +V++ ++D + + K ++ + ++ D+VTVD+T S
Sbjct: 112 YPEVELKGLDAIEVEKPVVDVNDADVDTMLDTLRKQQATWKDSDRAAQAEDRVTVDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +G + E LVG K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEVFEGGKASDFVLAMGQGRMIPGFEEGLVGHKAGEEFVIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + R G +R + +++ + VR ++K Q +
Sbjct: 232 KFAIVLKKVEERELPELTEEFIKRFGVADGSIEGLRAEVRKNMERELKGAVRNRIKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANDIDVPAALIDGEVDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++++ E+ +++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVISTHDLKADEDRVKTLIEEMASAY-EDPSEVVEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + + ++
Sbjct: 405 EQAVEALLAKAKVTEKATTFSELMNQTQQA 434
>gi|163843170|ref|YP_001627574.1| trigger factor [Brucella suis ATCC 23445]
gi|163673893|gb|ABY38004.1| trigger factor [Brucella suis ATCC 23445]
Length = 455
Score = 269 bits (688), Expect = 6e-70, Method: Composition-based stats.
Identities = 169/446 (37%), Positives = 285/446 (63%), Gaps = 1/446 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 9 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ ++ IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 69 SFMAEIVNEILNDLSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 128 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 188 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 248 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 307
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 308 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 367
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A++ LRAPIFE+K
Sbjct: 368 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVSNLRAPIFEEK 427
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSS 446
V+DH+L ++ + D+KV+ ++L +
Sbjct: 428 VVDHLLANINVTDKKVSKEELTAERA 453
>gi|148560488|ref|YP_001258877.1| trigger factor [Brucella ovis ATCC 25840]
gi|148371745|gb|ABQ61724.1| trigger factor [Brucella ovis ATCC 25840]
Length = 485
Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats.
Identities = 173/471 (36%), Positives = 293/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 9 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 69 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 128 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 188 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 248 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 307
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 308 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 367
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE K
Sbjct: 368 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEQK 427
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 428 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAAPKKKAE 478
>gi|153009610|ref|YP_001370825.1| trigger factor [Ochrobactrum anthropi ATCC 49188]
gi|151561498|gb|ABS14996.1| trigger factor [Ochrobactrum anthropi ATCC 49188]
Length = 485
Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats.
Identities = 170/451 (37%), Positives = 288/451 (63%), Gaps = 1/451 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 9 MQVTETLNEGLKREIKVVVPAKDLEAKLAERLETARDRAKINGFRPGKVPAAHLRKMYGK 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + +L++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 69 SFMAEIVNEILNDSSRSLLAERNEKSATQPEVIMSEDEKE-AEQVLDGKADFVFSLNYEV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + AFE K+ ++E D+VT+DY
Sbjct: 128 LPAIEVKDFSKIAVTREVVDISDEEVDDQVKRIASSTRAFETKKGKAENEDRVTIDYLGK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E LVG+K GD+K I FP ++ LAGK+
Sbjct: 188 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLVGVKAGDEKVITVTFPAEYGAAHLAGKEA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 248 TFDITVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 307
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 308 LDGDYQFATPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 367
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EV+EEE+Q A+Y Q+ R+PG EK++ + +K P+A+A LRAPIFE+K
Sbjct: 368 GLVLSEIGEKAGVEVSEEELQRAVYDQVRRYPGQEKEIYEFLRKTPDAVANLRAPIFEEK 427
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
V+DH+L ++ + D+KV+ ++L +++ E
Sbjct: 428 VVDHLLANISVTDKKVSKEELTAEDEDAASE 458
>gi|320327655|gb|EFW83663.1| trigger factor [Pseudomonas syringae pv. glycinea str. race 4]
gi|330882126|gb|EGH16275.1| trigger factor [Pseudomonas syringae pv. glycinea str. race 4]
Length = 436
Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats.
Identities = 97/453 (21%), Positives = 214/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 GARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ FD + V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFDTIAVERLSADVADSDLDNMLEVLRKQNVRFEVADRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S Q ++GS + + LVG K G+++ + FPED+ +LAGK
Sbjct: 172 VDGEVFAGGSATATQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLELAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFKQFGIKETGIEGFRTEVRKSMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++ +++ + ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 ELGLIVAEVVKQFDLKPDDARVREMIQEMASAY-QEPEQVVAWYYKNEQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAPKAD 436
>gi|319898782|ref|YP_004158875.1| trigger factor [Bartonella clarridgeiae 73]
gi|319402746|emb|CBI76293.1| trigger factor [Bartonella clarridgeiae 73]
Length = 475
Score = 269 bits (687), Expect = 6e-70, Method: Composition-based stats.
Identities = 168/465 (36%), Positives = 283/465 (60%), Gaps = 5/465 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ +++P+ L NER++D + K +KGFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKIVVPAKDLEAKLNERLDDTKGKITLKGFRPGKVPYNHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EII + IL +R+E +A +P I INE +I+G D L Y++
Sbjct: 61 SFMAEILNEIINDAPRSILLERNEYSATQPQIDINE-----DKKVIDGKADFVFSLKYEV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+ EI F D+++T++I +V E+E+D Q+ I + + K S+ GD++T+DY
Sbjct: 116 LPKFEIKDFKDIKITREIADVPEQEVDEQITRILSSTRNYSQKNGPSKEGDRITIDYLGK 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V + + + Q I+GS E L+ +K GD K I FP +++ LAGK
Sbjct: 176 IDGVPFDGGADNDAQLILGSKQFIPGFEEQLIDVKAGDVKTIFVKFPNNYNATHLAGKNA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K V P + ++++ A +LG ES +R + +++ + RQK+KRQ+LD
Sbjct: 236 EFDITVKAVSKPDELKIDDEAAKKLGLESLDRLREVVRGQVESRYGSMTRQKIKRQVLDA 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+FD+PE L+E E+N I +V ++ + ++ + +E+ + Y +LA+RRV
Sbjct: 296 LDADYSFDIPEQLLEIEFNNIWNQVNEDLKRMGRSFEDENVTEEQAREEYRVLAQRRVRL 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IG K I+V+E+E+++A++ Q+ ++PG EK+M+D F++ P A+A LRAPIFE+K
Sbjct: 356 GLVLSEIGTKVGIQVSEDELKAAVFDQVRQYPGREKEMMDFFRRTPEAVANLRAPIFEEK 415
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
VID++L ++I D+KVT ++L ES + K+ +
Sbjct: 416 VIDYLLTQIKITDKKVTVEELMKEYDESDLTDKIPAKKKIAVKEK 460
>gi|257483816|ref|ZP_05637857.1| trigger factor [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289627503|ref|ZP_06460457.1| trigger factor [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289649946|ref|ZP_06481289.1| trigger factor [Pseudomonas syringae pv. aesculi str. 2250]
gi|298486262|ref|ZP_07004325.1| Cell division trigger factor [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298159269|gb|EFI00327.1| Cell division trigger factor [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320325360|gb|EFW81427.1| trigger factor [Pseudomonas syringae pv. glycinea str. B076]
gi|330868376|gb|EGH03085.1| trigger factor [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330889998|gb|EGH22659.1| trigger factor [Pseudomonas syringae pv. mori str. 301020]
gi|330985638|gb|EGH83741.1| trigger factor [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 436
Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats.
Identities = 97/453 (21%), Positives = 214/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 GARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ FD + V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFDTIAVERLSADVADSDLDNMLEVLRKQNVRFEVADRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S Q ++GS + + LVG K G+++ + FPED+ +LAGK
Sbjct: 172 VDGEVFAGGSATATQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLELAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFKQFGIKETGIEGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++ +++ + ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 ELGLIVAEVVKQFDLKPDDARVREMIQEMASAY-QEPEQVVAWYYKNEQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAPKAD 436
>gi|71735514|ref|YP_273934.1| trigger factor [Pseudomonas syringae pv. phaseolicola 1448A]
gi|118574079|sp|Q48KZ1|TIG_PSE14 RecName: Full=Trigger factor; Short=TF
gi|71556067|gb|AAZ35278.1| trigger factor [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 436
Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats.
Identities = 97/453 (21%), Positives = 214/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 GARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ FD + V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFDTIAVERLSADVVDSDLDNMLEVLRKQNVRFEVADRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S Q ++GS + + LVG K G+++ + FPED+ +LAGK
Sbjct: 172 VDGEVFAGGSATATQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLELAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFKQFGIKETGIEGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++ +++ + ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 ELGLIVAEVVKQFDLKPDDARVREMIQEMASAY-QEPEQVVAWYYKNEQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAPKAD 436
>gi|330975105|gb|EGH75171.1| trigger factor [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 436
Score = 269 bits (686), Expect = 8e-70, Method: Composition-based stats.
Identities = 97/453 (21%), Positives = 214/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 GARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ FD + V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFDSISVERLSADVADSDLDNMLEVLRKQNVRFEVADRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S Q ++GS + + LVG K G+++ + FPED+ +LAGK
Sbjct: 172 VDGEVFAGGSATGTQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLELAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFKQFGIKETGIEGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++ +++ + ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 ELGLIVAEVVKQFDLKPDDARVREMIQEMASAY-QEPEQVVAWYYKSEQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAPKAD 436
>gi|117618825|ref|YP_856541.1| trigger factor [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|166229010|sp|A0KJU0|TIG_AERHH RecName: Full=Trigger factor; Short=TF
gi|117560232|gb|ABK37180.1| trigger factor [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 436
Score = 269 bits (686), Expect = 8e-70, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ + + + + + I GFRPGK P++ IK ++G
Sbjct: 1 MQVSVETTQGLERRLTITVPAATVDAAVRKELNGLAKTRRIDGFRPGKAPVAIIKKMFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ DE+++ + + + A P++ E I+ D + ++++
Sbjct: 61 MAHARVADEMMQSNFIKAIIENKLSPAGAPTMDPKE---------IQEGQDFEFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ + ++V + + V ++++ + + K + + + + G +VT+D+ S
Sbjct: 112 YPEFEVAGLETIKVEKPVATVKDEDLGNMIDTLRKQHATWSEVDAAAADGMRVTMDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + + ++G+ + + ++G K GD+ I+ FP D+ ++L GK
Sbjct: 172 IDGEEFDGGKAEGFNLVLGAGRMIPGFEDAIMGKKAGDEFTIDVTFPADYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + + + R G E + ++ + +++ ++ VK Q+L
Sbjct: 232 KFASKLNKVEEQILPELTEEFVKRFGIESGNVEELKAEVRKNMERELAQALKNSVKEQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + D+P++ V E + + Q+ + E + + A+RRV
Sbjct: 292 NGLVEANQIDLPKAAVAQEIDALRQQALQRFGGFQGGNA-----PELPAELFQGQAERRV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + N I+ E + S + + K++++++QK L +R E
Sbjct: 347 RVGLLLGDVIRTNEIKADEARVNSIIESMATAY-EDPKEVIEYYQKNEQMLNGVRNLAVE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
D+ ID IL Q+ +++V FD++ + S ++
Sbjct: 406 DQAIDLILSKAQVTEKEVAFDEVINKSGAAA 436
>gi|114707242|ref|ZP_01440140.1| trigger factor [Fulvimarina pelagi HTCC2506]
gi|114537438|gb|EAU40564.1| trigger factor [Fulvimarina pelagi HTCC2506]
Length = 454
Score = 269 bits (686), Expect = 8e-70, Method: Composition-based stats.
Identities = 175/438 (39%), Positives = 284/438 (64%), Gaps = 1/438 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE++V++P++ L R+ + + K +KGFRPGKVP+SH++ +YGK
Sbjct: 1 MQVTETKAEGLKREIEVVVPASDLEARLQTRLHEAKGKVQLKGFRPGKVPVSHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+KE I+++R+ER+AM+P I + E + + ++ G D K LSY+
Sbjct: 61 SFMAEIVNEILKETPSSIIAERNERSAMQPEIDMTEDQGE-AEKVLAGKSDFKFTLSYEK 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP E++S D +++ + I EV ++E++ Q+ +A+N + K+ +E GD+VT+D+
Sbjct: 120 LPNFELASTDGMKIERPIVEVPDEEVEEQVKRVAENAREYTPKDGAAEDGDRVTLDFVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + S + ++GS E LVG+ GD+K++ FPED+ DLAGK+
Sbjct: 180 IDGEAFQGGSATDSNLVIGSNQFIPGFEEQLVGVSAGDEKQVVVTFPEDYGAPDLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +IK V SP + +N++LA +LG ESE +R + ++I+ RQKVKRQILD
Sbjct: 240 TFDTTIKSVASPADIEINDELAKKLGLESEERLRTVVREQIESQYGQATRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+F++PE LVE E+N I +V+ E+S + + ++ D+ +E+ + Y LA+RRV
Sbjct: 300 LDETYSFELPEKLVEAEFNNIWNQVQAELSRSGKTFEDEDTTEEKAKEEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK I+V+EEE+Q A++ QL R+PG E+++ + ++K P+ALA LRAPI+EDK
Sbjct: 360 GLVLSEIGEKAGIQVSEEELQRAMFDQLRRYPGQEQQVYEFYKKNPDALASLRAPIYEDK 419
Query: 421 VIDHILKSVQIVDRKVTF 438
VID +L + D+ VT
Sbjct: 420 VIDKLLAEADVTDKVVTK 437
>gi|319405547|emb|CBI79166.1| trigger factor [Bartonella sp. AR 15-3]
Length = 475
Score = 269 bits (686), Expect = 9e-70, Method: Composition-based stats.
Identities = 168/464 (36%), Positives = 284/464 (61%), Gaps = 5/464 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ +++P L + NER++D + K +KGFRPGKVP H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKIVVPVKDLEEKLNERLDDAKGKIKLKGFRPGKVPSDHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E I+EII + +L++R+E +A +P I INE +I+G D L Y++
Sbjct: 61 SFMAEIINEIINNVPRSVLAERNEYSATQPQIDINEDTK-----VIDGKADFVFSLKYEV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+ E+ F ++++ ++I +V E+EID Q+ I + ++ K S+ D++T+DY
Sbjct: 116 LPKFEVKDFKNIKIIREIADVPEQEIDEQITHILSSTRSYSPKNAPSKEDDRITIDYFGK 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V + + N Q I+GS E L+GLK GD K I FP+D+S LAGK
Sbjct: 176 IDGVPFDGGTDNNAQLILGSKQFIPGFEEQLIGLKAGDVKTISVKFPDDYSATHLAGKNA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K V P + ++++ A +LG ES +R + ++++ + RQK+KRQ+LD
Sbjct: 236 EFDVTVKTVSKPDELKIDDEAAKKLGLESLDRLREVVRRQVESRYGSMTRQKIKRQVLDA 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+FD+PE L+E E+N I +++ ++ + ++ + +E+ Y MLA+RRV
Sbjct: 296 LDADYSFDIPEQLLEIEFNNIWKQINEDLKRMGRSFEDENITEEQARDEYRMLAQRRVRL 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IG K I+++E+E+++A+++Q+ ++PG EK+M+D F++ P A+A LRAPIFE+K
Sbjct: 356 GLVLSEIGTKVGIQISEDELKAAVFEQVRQYPGREKEMMDFFRRTPEAVANLRAPIFEEK 415
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQ 464
VID++L ++I D+KVT ++L ES + +
Sbjct: 416 VIDYLLTQIKITDKKVTIEELMREYDESDLTDKTSTKKQSAVKE 459
>gi|261325005|ref|ZP_05964202.1| trigger factor [Brucella neotomae 5K33]
gi|261300985|gb|EEY04482.1| trigger factor [Brucella neotomae 5K33]
Length = 479
Score = 269 bits (686), Expect = 9e-70, Method: Composition-based stats.
Identities = 175/471 (37%), Positives = 293/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 9 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 69 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 128 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 188 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 248 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 307
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 308 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 367
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 368 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 427
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E L K + + E E
Sbjct: 428 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKLAKKAAAKKKAEEGKSEE 478
>gi|62289843|ref|YP_221636.1| trigger factor [Brucella abortus bv. 1 str. 9-941]
gi|82699768|ref|YP_414342.1| trigger factor [Brucella melitensis biovar Abortus 2308]
gi|237815330|ref|ZP_04594328.1| trigger factor [Brucella abortus str. 2308 A]
gi|260757871|ref|ZP_05870219.1| trigger factor [Brucella abortus bv. 4 str. 292]
gi|260761694|ref|ZP_05874037.1| trigger factor [Brucella abortus bv. 2 str. 86/8/59]
gi|62195975|gb|AAX74275.1| Tig, trigger factor [Brucella abortus bv. 1 str. 9-941]
gi|82615869|emb|CAJ10873.1| Peptidylprolyl isomerase, FKBP-type:Protein prenyltransferase,
alpha subunit:Trigger factor [Brucella melitensis biovar
Abortus 2308]
gi|237790167|gb|EEP64377.1| trigger factor [Brucella abortus str. 2308 A]
gi|260668189|gb|EEX55129.1| trigger factor [Brucella abortus bv. 4 str. 292]
gi|260672126|gb|EEX58947.1| trigger factor [Brucella abortus bv. 2 str. 86/8/59]
Length = 479
Score = 269 bits (686), Expect = 9e-70, Method: Composition-based stats.
Identities = 174/471 (36%), Positives = 292/471 (61%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 9 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 69 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 128 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 188 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 248 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 307
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 308 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 367
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 368 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 427
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + E E
Sbjct: 428 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAEEGKSEE 478
>gi|22124933|ref|NP_668356.1| trigger factor [Yersinia pestis KIM 10]
gi|45440622|ref|NP_992161.1| trigger factor [Yersinia pestis biovar Microtus str. 91001]
gi|51595308|ref|YP_069499.1| trigger factor [Yersinia pseudotuberculosis IP 32953]
gi|108808644|ref|YP_652560.1| trigger factor [Yersinia pestis Antiqua]
gi|108811097|ref|YP_646864.1| trigger factor [Yersinia pestis Nepal516]
gi|145600053|ref|YP_001164129.1| trigger factor [Yersinia pestis Pestoides F]
gi|149364996|ref|ZP_01887031.1| Trigger factor [Yersinia pestis CA88-4125]
gi|153950686|ref|YP_001402053.1| trigger factor [Yersinia pseudotuberculosis IP 31758]
gi|162420257|ref|YP_001607421.1| trigger factor [Yersinia pestis Angola]
gi|165926570|ref|ZP_02222402.1| trigger factor [Yersinia pestis biovar Orientalis str. F1991016]
gi|165935910|ref|ZP_02224480.1| trigger factor [Yersinia pestis biovar Orientalis str. IP275]
gi|166011084|ref|ZP_02231982.1| trigger factor [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213027|ref|ZP_02239062.1| trigger factor [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399486|ref|ZP_02305010.1| trigger factor [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421613|ref|ZP_02313366.1| trigger factor [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167423079|ref|ZP_02314832.1| trigger factor [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|167471040|ref|ZP_02335744.1| trigger factor [Yersinia pestis FV-1]
gi|170025452|ref|YP_001721957.1| trigger factor [Yersinia pseudotuberculosis YPIII]
gi|186894325|ref|YP_001871437.1| trigger factor [Yersinia pseudotuberculosis PB1/+]
gi|218930188|ref|YP_002348063.1| trigger factor [Yersinia pestis CO92]
gi|229838762|ref|ZP_04458921.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229896084|ref|ZP_04511254.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Yersinia
pestis Pestoides A]
gi|229899330|ref|ZP_04514473.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Yersinia
pestis biovar Orientalis str. India 195]
gi|229901326|ref|ZP_04516448.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Yersinia
pestis Nepal516]
gi|270489512|ref|ZP_06206586.1| trigger factor [Yersinia pestis KIM D27]
gi|294504889|ref|YP_003568951.1| trigger factor [Yersinia pestis Z176003]
gi|21264073|sp|Q8ZC64|TIG_YERPE RecName: Full=Trigger factor; Short=TF
gi|67461726|sp|Q66DT5|TIG_YERPS RecName: Full=Trigger factor; Short=TF
gi|118574094|sp|Q1C4K7|TIG_YERPA RecName: Full=Trigger factor; Short=TF
gi|118574095|sp|Q1CL66|TIG_YERPN RecName: Full=Trigger factor; Short=TF
gi|166229955|sp|A4TPE4|TIG_YERPP RecName: Full=Trigger factor; Short=TF
gi|166988056|sp|A7FLC5|TIG_YERP3 RecName: Full=Trigger factor; Short=TF
gi|226738698|sp|A9QZQ4|TIG_YERPG RecName: Full=Trigger factor; Short=TF
gi|238688403|sp|B1JHS2|TIG_YERPY RecName: Full=Trigger factor; Short=TF
gi|238691417|sp|B2K6V6|TIG_YERPB RecName: Full=Trigger factor; Short=TF
gi|21957772|gb|AAM84607.1|AE013706_2 trigger factor protein [Yersinia pestis KIM 10]
gi|45435479|gb|AAS61038.1| Trigger factor [Yersinia pestis biovar Microtus str. 91001]
gi|51588590|emb|CAH20198.1| peptidyl-prolyl cis/trans isomerase, trigger factor; a molecular
chaperone involved in cell division [Yersinia
pseudotuberculosis IP 32953]
gi|108774745|gb|ABG17264.1| Trigger factor [Yersinia pestis Nepal516]
gi|108780557|gb|ABG14615.1| Trigger factor [Yersinia pestis Antiqua]
gi|115348799|emb|CAL21753.1| Trigger factor [Yersinia pestis CO92]
gi|145211749|gb|ABP41156.1| Trigger factor [Yersinia pestis Pestoides F]
gi|149291409|gb|EDM41483.1| Trigger factor [Yersinia pestis CA88-4125]
gi|152962181|gb|ABS49642.1| trigger factor [Yersinia pseudotuberculosis IP 31758]
gi|162353072|gb|ABX87020.1| trigger factor [Yersinia pestis Angola]
gi|165916055|gb|EDR34662.1| trigger factor [Yersinia pestis biovar Orientalis str. IP275]
gi|165921498|gb|EDR38695.1| trigger factor [Yersinia pestis biovar Orientalis str. F1991016]
gi|165990084|gb|EDR42385.1| trigger factor [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205814|gb|EDR50294.1| trigger factor [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960532|gb|EDR56553.1| trigger factor [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167051990|gb|EDR63398.1| trigger factor [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167057249|gb|EDR66995.1| trigger factor [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169751986|gb|ACA69504.1| trigger factor [Yersinia pseudotuberculosis YPIII]
gi|186697351|gb|ACC87980.1| trigger factor [Yersinia pseudotuberculosis PB1/+]
gi|229681255|gb|EEO77349.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Yersinia
pestis Nepal516]
gi|229687732|gb|EEO79805.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Yersinia
pestis biovar Orientalis str. India 195]
gi|229695128|gb|EEO85175.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229701007|gb|EEO89036.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Yersinia
pestis Pestoides A]
gi|262366874|gb|ACY63431.1| trigger factor [Yersinia pestis D182038]
gi|270338016|gb|EFA48793.1| trigger factor [Yersinia pestis KIM D27]
gi|294355348|gb|ADE65689.1| trigger factor [Yersinia pestis Z176003]
gi|320016344|gb|ADV99915.1| trigger factor [Yersinia pestis biovar Medievalis str. Harbin 35]
Length = 434
Score = 269 bits (686), Expect = 9e-70, Method: Composition-based stats.
Identities = 84/450 (18%), Positives = 207/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + I GFR G VP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIEKAVKSELVKAAKNVRIDGFRKGHVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPN---------YVPGEYKQGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV++ ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKDLESIEVEKPVVEVNDADVDTMLETLRKQQATWKETDAAATAEDRATLDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + E ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKATDFVLAMGQGRMIPGFEEGVIGHKAGEEFTIDVNFPEDYHAENLKGKSA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + R G S +R + +++ + VR +VK Q +
Sbjct: 232 KFAIVLKKVEVRELPELTEEFIKRFGVADGSLAGLRAEVRKNMERELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +LV+ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANNIDVPTALVDGEIDVLRRQAAQRFGG------NEKQAAELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ ++ E+ +++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVISQHELKADEDRVKALIEEMASAY-EDPQEVIEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + ++ +
Sbjct: 405 EQAVETLLAKAKVTEKPTTFSELMNQTTAA 434
>gi|49475385|ref|YP_033426.1| trigger factor [Bartonella henselae str. Houston-1]
gi|67461758|sp|Q6G3Y8|TIG_BARHE RecName: Full=Trigger factor; Short=TF
gi|49238191|emb|CAF27401.1| Trigger factor [Bartonella henselae str. Houston-1]
Length = 469
Score = 269 bits (686), Expect = 9e-70, Method: Composition-based stats.
Identities = 164/473 (34%), Positives = 290/473 (61%), Gaps = 7/473 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ +++P+ L + NER+++ + K + GFRPGKVP +++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKIVVPARNLEEKLNERLDNTKDKIKLNGFRPGKVPAGYLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R ER+AM+P I + E +++G D L Y++
Sbjct: 61 SFMAEILNEIVSDASRSILAERGERSAMQPKIDVEE-----DKKILDGKADFIFSLKYEV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+ EI F+ +++ ++I + E+EID Q+ + + + +K+ SE GD+VT+DY
Sbjct: 116 LPKFEIKDFEHIEIIREIAVIPEQEIDDQVKRVLSSACNYSLKDGPSEEGDRVTIDYIGK 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ V E ++ + Q I+GS E LVG+K GD K I FP+++S LAGK
Sbjct: 176 LEGVPFEGGAESDAQLILGSKQFIPGFEEQLVGVKAGDMKTISVKFPDNYSAVHLAGKNA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K V + ++++ A ++G ES +R + +I+ + RQK+KRQILD
Sbjct: 236 EFDITVKAVCKSDELKIDDEAAQKVGLESLERLREVVRGQIESQYGSMTRQKIKRQILDA 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F++PE L+E E+N I +V ++ A + ++ +E+ + Y +LA+RRV
Sbjct: 296 LDADYNFEIPEGLLEIEFNNIWAQVNDDLKKAGRSFEDEGVTEEQAREEYRVLAQRRVRL 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IG ++V+E+E+++A++ Q+ ++PG EK+++D F+ P A+A LRAPIFE+K
Sbjct: 356 GLVLSEIGMNIGVKVSEDELKAAVFDQVRQYPGQEKEIMDFFRNTPEAVANLRAPIFEEK 415
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSES--SPEKLLDKSSKVETFQSEEAPSE 471
VIDH+L +++ D++VT ++L E+ + +K L K + + ++AP +
Sbjct: 416 VIDHLLARIKVTDKEVTVEELMKEYDETDLTEKKPLKKKTAEKVSTKKKAPKK 468
>gi|265994834|ref|ZP_06107391.1| trigger factor [Brucella melitensis bv. 3 str. Ether]
gi|262765947|gb|EEZ11736.1| trigger factor [Brucella melitensis bv. 3 str. Ether]
Length = 479
Score = 269 bits (686), Expect = 9e-70, Method: Composition-based stats.
Identities = 174/471 (36%), Positives = 292/471 (61%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 9 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 69 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 128 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 188 LDGEPFEGGADNDAQLVLGSGQFIPGLEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 248 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 307
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 308 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 367
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 368 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 427
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + E E
Sbjct: 428 VVDHLLANINVTDKKVSKEELTAEDEDAALEAKPAKKAAAKKKAEEGKSEE 478
>gi|157369337|ref|YP_001477326.1| trigger factor [Serratia proteamaculans 568]
gi|166988054|sp|A8GAQ8|TIG_SERP5 RecName: Full=Trigger factor; Short=TF
gi|157321101|gb|ABV40198.1| trigger factor [Serratia proteamaculans 568]
Length = 434
Score = 269 bits (686), Expect = 1e-69, Method: Composition-based stats.
Identities = 88/450 (19%), Positives = 209/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R L + +P++ + + + + + I GFR G VP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRLSITVPADTIKQAIKKELINAAKSVRIDGFRKGHVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + + ++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDAMQRSFVDAIIKEKINPAGAPN---------YVPGEYKEGEDFTFAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + EV++ ++D + + K ++ + ++ D+VTVD++ S
Sbjct: 112 YPEVELKGLDGIEVEKPVVEVNDADVDTMLDTLRKQQATWKETDRAAQAEDRVTVDFSGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + E LVG K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKASDFVLAMGQGRMIPGFEEGLVGHKAGEEFTIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + R G +R + +++ + VR ++K Q +
Sbjct: 232 KFAIVLKKVEERELPELTEEFIKRFGVADGSTEGLRAEVRKNMERELKGAVRNRIKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANEIDVPAALIDGEVDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N+++ E+ +++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVISTNDLKADEDRVKTLIEEMASAY-EDPSEVVEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + + ++
Sbjct: 405 EQAVEALLAKAKVTEKATTFSELMNQTQQA 434
>gi|70731347|ref|YP_261088.1| trigger factor [Pseudomonas fluorescens Pf-5]
gi|118574080|sp|Q4K9J5|TIG_PSEF5 RecName: Full=Trigger factor; Short=TF
gi|68345646|gb|AAY93252.1| trigger factor [Pseudomonas fluorescens Pf-5]
Length = 436
Score = 269 bits (686), Expect = 1e-69, Method: Composition-based stats.
Identities = 98/453 (21%), Positives = 218/453 (48%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMSITVPAERIESQVNKRLQQTAQKAKIPGFRPGKVPMSVIRQRYEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A PS+ ++E DL+ ++++
Sbjct: 61 DARQEAVGDVIQASFYEAVVEQKLNPAGAPSVEPK---------VLEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ F+++ V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFENIAVERLSADVADADLDNMLEILRKQNVRFEVADRAAQNDDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S K Q ++GS + E LVG K G+++ + FPE++ DLA K
Sbjct: 172 VDGEVFAGGSAKGTQLVLGSGRMIPGFEEGLVGAKAGEERVLNLTFPENYQNLDLANKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P + + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNSVSEPKLPELTEEFFAQFGIKEAGLEGFRAEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L++NE N + + + D+ + + AKRRV
Sbjct: 292 DGLLASNPIEVPKALLDNEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ +++ E+ ++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFDLKPDEDRVRELIQEMASAY-QEPEQVVSWYYKNEQQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAPQAD 436
>gi|240850279|ref|YP_002971672.1| trigger factor [Bartonella grahamii as4aup]
gi|240267402|gb|ACS50990.1| trigger factor [Bartonella grahamii as4aup]
Length = 475
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 170/471 (36%), Positives = 289/471 (61%), Gaps = 7/471 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ +++P+ L + NER++D + K + GFRPGKVP H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKIVVPAKDLEEKLNERLDDTKGKIKLNGFRPGKVPSGHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL+ R+ERAAM+P I I D +++G D L Y++
Sbjct: 61 SFMAEILNEILSDAPRSILADRNERAAMQPKIDI-----DEDEKILDGKADFTFSLKYEV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+IEI F+ ++V ++I + E++ID Q+ + + + +KE SE GD++++DY
Sbjct: 116 LPKIEIKDFEHIKVIREIATIPEQDIDDQINRVLSSTRNYSLKEGASEEGDRISIDYQGK 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ E + Q I+GS E LVG+K GD K I FP+++S L+G++
Sbjct: 176 LEGAPFEGGEDSDAQLILGSKQFIPGFEEQLVGVKAGDAKTIFVKFPDNYSAAHLSGREA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K VF P + ++++ A ++G ES +R + +I+ + RQKVKRQILD
Sbjct: 236 EFDITVKAVFKPDELKIDDEAAQKVGLESLDRLREVVRGQIESQYGSVTRQKVKRQILDA 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F++PE L+E E+N I +V ++ A + ++ +E+ + Y +LA+RRV
Sbjct: 296 LDADYNFEIPEELLEIEFNNIWAQVNDDLKKAGRSFEDEGITEEKAREEYRVLAQRRVRL 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IG K ++V+E+E+++A++ Q+ ++PG EK+++D F++ P A+ LRAPIFE+K
Sbjct: 356 GLVLSEIGMKVGVKVSEDELKAAVFDQVRQYPGQEKEIMDFFRRTPEAVENLRAPIFEEK 415
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSES--SPEKLLDKSSKVETFQSEEAP 469
VIDH+L +++ D++VT ++L ES EK K S V+ +E+
Sbjct: 416 VIDHLLAQIKVTDKEVTVEELMKEYDESDIPEEKPAKKKSAVKETSTEKTS 466
>gi|254693632|ref|ZP_05155460.1| trigger factor [Brucella abortus bv. 3 str. Tulya]
gi|261213898|ref|ZP_05928179.1| trigger factor [Brucella abortus bv. 3 str. Tulya]
gi|260915505|gb|EEX82366.1| trigger factor [Brucella abortus bv. 3 str. Tulya]
Length = 477
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 173/471 (36%), Positives = 294/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLGERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAAPKKKAE 470
>gi|306843797|ref|ZP_07476395.1| trigger factor [Brucella sp. BO1]
gi|306275875|gb|EFM57591.1| trigger factor [Brucella sp. BO1]
Length = 477
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 173/471 (36%), Positives = 294/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAKDEDAASEAKPAKKAAAKKKAAPKKKAE 470
>gi|229591363|ref|YP_002873482.1| trigger factor [Pseudomonas fluorescens SBW25]
gi|259533637|sp|C3JYK1|TIG_PSEFS RecName: Full=Trigger factor; Short=TF
gi|229363229|emb|CAY50312.1| trigger factor [Pseudomonas fluorescens SBW25]
Length = 436
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 103/453 (22%), Positives = 219/453 (48%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R L + +P+ R+ + N+R++ KA I GFRPGKVP+S IK +G
Sbjct: 1 MQVSVENTTALERRLSITVPAERIETAVNKRLQQTAQKAKIAGFRPGKVPMSEIKRRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A PSI +E DL+ +++
Sbjct: 61 DARQEAVGDVIQASFYEAVVEQKLNPAGSPSIEPKS---------LEAGKDLEYVAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ FD + + + EV + ++D + + K N FEV E ++ D++ +D+
Sbjct: 112 FPEFEVAGFDGIAIERLSAEVADSDLDNMLEILRKQNTRFEVAERAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD S K Q ++GS + + LVG K G+++ + FP D+ DLAGK
Sbjct: 172 VDGEAFAGGSAKGTQLVLGSNRMIPGFEDGLVGAKAGEERVLNLEFPADYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNSVSEPKLPELNEEFFAQFGIKETGIEGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ NE + + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLSNEVDRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ +++ E+ ++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFDLKPDEDRVREMIQEMASAY-QEPEQVVAWYYKNDQQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ ++ D+ V++++ + + +
Sbjct: 404 EQVVDTVLQKAKVTDKAVSYEEAVKPAEAAQAD 436
>gi|172048302|sp|A5VQ80|TIG_BRUO2 RecName: Full=Trigger factor; Short=TF
Length = 477
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 173/471 (36%), Positives = 293/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEQK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAAPKKKAE 470
>gi|330959386|gb|EGH59646.1| trigger factor [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 436
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 96/453 (21%), Positives = 214/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 GARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ F+ + V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFETIAVERLSADVADSDLDNMLEVLRKQNVRFEVTDRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S Q ++GS + + LVG K G+++ + FPED+ +LAGK
Sbjct: 172 VDGEVFAGGSATATQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLELAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFKQFGIKETGIEGFRAEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++ +++ + ++ + + + ++++ + K + E+R+ + E
Sbjct: 345 ELGLIVAEVVKQFDLKPDDARVREMIQEMASAY-QEPEQVVAWYYKNEQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAPKAD 436
>gi|271499596|ref|YP_003332621.1| trigger factor [Dickeya dadantii Ech586]
gi|270343151|gb|ACZ75916.1| trigger factor [Dickeya dadantii Ech586]
Length = 434
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 89/450 (19%), Positives = 210/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + ++ + + K I GFR GKVP ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIENAVKSELVSVAKKVRIDGFRKGKVPAKIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRHFVDAIIKEKINPAGAPN---------YVPGEYQVGGDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + +V + ++D + + K + + + D+VT+D+T S
Sbjct: 112 YPEVELKGLDTIEVEKPLVDVSDADVDGMLDTLRKQQATWRDADRAAAAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V E + +G + + +VG K GD+ I+ FPED+ ++L G+
Sbjct: 172 VGGEEFEGGKASDFVLAMGQGRMIPGFEDGIVGHKAGDEFTIDVKFPEDYHAENLKGQDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + D R G E +R + +++ + +R +VK Q++
Sbjct: 232 KFVIVLKKVEERELPELTADFIKRFGVEDGSIDGLRAEVRKNMERELKGAIRNRVKSQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVKANEIDVPAALIDGEVDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + E + ++ E+ + + + + ++++++++K + +R E
Sbjct: 346 VVGLLLGEVIESHELKADEDRVNVLIDEIASAY-EDPREVVEYYKKNKEMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ I+ +L ++V++ V+F++L + ++ +
Sbjct: 405 EQAIEALLSKAKVVEKSVSFNELMNQTTAA 434
>gi|256823173|ref|YP_003147136.1| trigger factor [Kangiella koreensis DSM 16069]
gi|256796712|gb|ACV27368.1| trigger factor [Kangiella koreensis DSM 16069]
Length = 432
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 222/448 (49%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + GL+R+L + +P+ + + +R++D+ + GFRPGKVP S +K YG
Sbjct: 1 MQVSVETTNGLERKLIIDVPAENIDGAVQKRLQDLARNVKMNGFRPGKVPFSVVKKRYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E + ++++ E + + A P + + E +LK +++
Sbjct: 61 SVRQEVLGDVMQRHYFEAVQQEKLMPAGYPQLELIEN---------NDGANLKFSAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+++++ + +++ + EV ++++ + M + ++ + +++ GD+V +D+
Sbjct: 112 YPEVKLADLNAIEIEKATSEVSDEDLTKMMDTLRGQRASWVEVKRKAKDGDQVVIDFKGF 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + K +G+ ++ E LVG GD E+ FPED+ + DL GK+
Sbjct: 172 IDGEAFKGGEAKEFPLELGAGNMIPGFEEQLVGASAGDDVEVTVTFPEDYHVDDLKGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ + V V LA +LG E S+++ Q +++ ++ +VK Q++
Sbjct: 232 KFETHVHAVNKKELPTVTE-LAEQLGAEDISSLKADVKQNMERELRNAIKSRVKGQVMTQ 290
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ +K+ +VP+++++ E + Q++ +M + + + A RRV
Sbjct: 291 LVDKHDVEVPKAMLDQEIERMRQEMAQQMRAPE------GQTPDLPASLFEEQATRRVKL 344
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+++ I + ++ E+++++ + G + K+++D + P L E+ + + ED
Sbjct: 345 GLIVSEIIKAEGLKADEDKVRAQVEDLAGVY-EDPKEVVDWYYGDPGRLREVESLVLEDT 403
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSES 448
V+D +L+ ++ D+ V+FD+L + ++
Sbjct: 404 VVDLVLEKAKVTDKSVSFDELLNPDNKQ 431
>gi|254689149|ref|ZP_05152403.1| trigger factor [Brucella abortus bv. 6 str. 870]
gi|254719003|ref|ZP_05180814.1| trigger factor [Brucella sp. 83/13]
gi|256044573|ref|ZP_05447477.1| trigger factor [Brucella melitensis bv. 1 str. Rev.1]
gi|256257399|ref|ZP_05462935.1| trigger factor [Brucella abortus bv. 9 str. C68]
gi|256264091|ref|ZP_05466623.1| trigger factor [Brucella melitensis bv. 2 str. 63/9]
gi|260563924|ref|ZP_05834410.1| trigger factor [Brucella melitensis bv. 1 str. 16M]
gi|260754648|ref|ZP_05866996.1| trigger factor [Brucella abortus bv. 6 str. 870]
gi|260883674|ref|ZP_05895288.1| trigger factor [Brucella abortus bv. 9 str. C68]
gi|265983993|ref|ZP_06096728.1| trigger factor [Brucella sp. 83/13]
gi|265990997|ref|ZP_06103554.1| trigger factor [Brucella melitensis bv. 1 str. Rev.1]
gi|306840110|ref|ZP_07472896.1| trigger factor [Brucella sp. NF 2653]
gi|21264071|sp|Q8YGT8|TIG_BRUME RecName: Full=Trigger factor; Short=TF
gi|260153940|gb|EEW89032.1| trigger factor [Brucella melitensis bv. 1 str. 16M]
gi|260674756|gb|EEX61577.1| trigger factor [Brucella abortus bv. 6 str. 870]
gi|260873202|gb|EEX80271.1| trigger factor [Brucella abortus bv. 9 str. C68]
gi|263001781|gb|EEZ14356.1| trigger factor [Brucella melitensis bv. 1 str. Rev.1]
gi|263094294|gb|EEZ18155.1| trigger factor [Brucella melitensis bv. 2 str. 63/9]
gi|264662585|gb|EEZ32846.1| trigger factor [Brucella sp. 83/13]
gi|306404838|gb|EFM61131.1| trigger factor [Brucella sp. NF 2653]
gi|326408919|gb|ADZ65984.1| trigger factor [Brucella melitensis M28]
gi|326538636|gb|ADZ86851.1| trigger factor [Brucella melitensis M5-90]
Length = 477
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 173/471 (36%), Positives = 294/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAAPKKKAE 470
>gi|330829919|ref|YP_004392871.1| Trigger factor [Aeromonas veronii B565]
gi|328805055|gb|AEB50254.1| Trigger factor [Aeromonas veronii B565]
Length = 436
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 91/451 (20%), Positives = 210/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ + + + + + I GFRPGK P++ IK ++G
Sbjct: 1 MQVSVETTQGLERRLTITVPAATVDAAVRKELNGLAKTRRIDGFRPGKAPVAIIKKMFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ DE+++ + + + A P++ E I+ D + ++++
Sbjct: 61 MAHARVADEMMQSNFIKAIIENKLSPAGAPTMDPKE---------IKEGQDFEFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ + ++V + + V ++++ + + K + + + + G +VT+D+ S
Sbjct: 112 YPEFEVAGLETIKVEKPVATVKDEDLANMIDTLRKQHATWADADVAAANGMRVTMDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + + ++G+ + + ++G K GD+ IE FP D+ ++L GK+
Sbjct: 172 IDGEEFDGGKAEGFNLVLGAGRMIPGFEDAILGKKAGDEFTIEVTFPADYHAENLKGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + + + R G E S ++ + +++ ++ VK Q+L
Sbjct: 232 KFASKLIKVEEQILPELTEEFVKRFGIESGSVEELKAEVRKNMERELAQALKNSVKEQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + D+P++ V E + + Q+ + E + + A+RRV
Sbjct: 292 NGLVEANQIDLPKAAVAQEIDALRQQALQRFGGFQGGNA-----PELPAELFQAQAERRV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + N I+ + + S + + K++++++QK L +R E
Sbjct: 347 RVGLLLGDVIRTNEIKADDARVNSIIESMATAY-EDPKEVIEYYQKNEQMLNGVRNLAVE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
D+ ID IL Q+ +++V FD++ + S ++
Sbjct: 406 DQAIDLILSKAQVTEKEVAFDEVINKSGAAA 436
>gi|306840393|ref|ZP_07473158.1| trigger factor [Brucella sp. BO2]
gi|306289631|gb|EFM60835.1| trigger factor [Brucella sp. BO2]
Length = 477
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 174/471 (36%), Positives = 294/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E LVGLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLVGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAAPKKKAE 470
>gi|317047174|ref|YP_004114822.1| trigger factor [Pantoea sp. At-9b]
gi|316948791|gb|ADU68266.1| trigger factor [Pantoea sp. At-9b]
Length = 434
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 87/450 (19%), Positives = 207/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + ++GL R + + + ++ + + + + D+ K I GFR GKVP+ + YG
Sbjct: 1 MTVSVETTQGLGRRITITVAADSIESAVKKELVDVAKKVRIDGFRKGKVPMQIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPN---------YVPGEYKLGEDFTFTVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + EV + ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELQGLDSIEVEKPVVEVTDADVDTMLETLRKQQATWKESDAAAGAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+ I+ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGVVGHKAGETFTIDVKFPEDYHAENLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + R G E + +R + +++ + +R ++K Q +
Sbjct: 232 KFEIVLKKVEVRELPELTEEFIKRFGVEDGSVAGLRTEVRKNMERELKGAIRNRLKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 DGLVNANAIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ E +++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELQADESRVKALIEEMASAY-EDPQEVIEFYSKNNELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L+ ++ ++ F +L + ++ +
Sbjct: 405 EQAVEAVLEKAKVTEKATNFQELMNQTASA 434
>gi|192359587|ref|YP_001982473.1| trigger factor [Cellvibrio japonicus Ueda107]
gi|238692440|sp|B3PHK7|TIG_CELJU RecName: Full=Trigger factor; Short=TF
gi|190685752|gb|ACE83430.1| trigger factor [Cellvibrio japonicus Ueda107]
Length = 437
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 110/449 (24%), Positives = 211/449 (46%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + GL+R L V +P+ ++ + R++ IKGFR GKVPLS +K +G
Sbjct: 1 MQVSLETTSGLERRLTVGVPAEQVENEVENRLKQAARNVTIKGFRKGKVPLSVVKQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E + ++I + K + + A +PSI + + DL+ +++
Sbjct: 61 GIRQEVVGDVINRSFYAAVQKENLKPAGQPSIQPKQ---------LSAGQDLEYIAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +E+S ++T+ EV + ++D + + K+ + E + GD+V +++ +
Sbjct: 112 YPSVELSDLSVFEITRHKAEVTDVDVDNMIDVLRKHQATWTQVERAAADGDQVNINFVGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D V N I+GS + LVGLK+GDQK + FPED+ ++L G V
Sbjct: 172 KDGVEFAGGKADNQNLILGSNSMIPGFEAGLVGLKSGDQKTLALTFPEDYHSEELKGAAV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V + +N + + G E E R +++ ++ KVK Q++
Sbjct: 232 EFAVTVNSVSEAVLPELNKEFFQKFGVEKGGEKQFRKEVKANMERELGNALKAKVKGQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +T DVP++LV NE + ++ QN D + A RRV
Sbjct: 292 DALVASHTVDVPKALVANEIQVLRNQMLQRFGGQQ---QNFDVKSLLPDTMFQEEASRRV 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++G I + ++ + ++S + + + ++++D++ LA + + + E
Sbjct: 349 TLGLIVGEIVKSAKLKPDAKRIKSMIEEIASTY-QEPQEVIDYYNSNQELLAGVESAVLE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
D+V+DHIL ++ D T+D + + ++
Sbjct: 408 DQVVDHILSKAKVSDVDSTYDDVIKSKAQ 436
>gi|172044123|sp|A6X192|TIG_OCHA4 RecName: Full=Trigger factor; Short=TF
Length = 477
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 170/451 (37%), Positives = 288/451 (63%), Gaps = 1/451 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAKDLEAKLAERLETARDRAKINGFRPGKVPAAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + +L++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSLLAERNEKSATQPEVIMSEDEKE-AEQVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + AFE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDDQVKRIASSTRAFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E LVG+K GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLVGVKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDITVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFATPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EV+EEE+Q A+Y Q+ R+PG EK++ + +K P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVSEEELQRAVYDQVRRYPGQEKEIYEFLRKTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
V+DH+L ++ + D+KV+ ++L +++ E
Sbjct: 420 VVDHLLANISVTDKKVSKEELTAEDEDAASE 450
>gi|238751005|ref|ZP_04612501.1| Trigger factor [Yersinia rohdei ATCC 43380]
gi|238710695|gb|EEQ02917.1| Trigger factor [Yersinia rohdei ATCC 43380]
Length = 434
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 84/450 (18%), Positives = 209/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + I GFR G VP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIEKAVKSELVKAAKNVRIDGFRKGHVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPN---------YVPGQYKQGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV++ ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKDLESIEVEKPVVEVNDADVDTMLDTLRKQQATWKETDAAATAEDRATLDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +G + E ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEVFEGGKASDFVLAMGQGRMIPGFEEGVIGHKAGEEFTIDVNFPEDYHAENLKGKSA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEVRELPELTEEFIKRFGVADGSLAGLRAEVRKNMERELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +LVE E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANEIDVPAALVEGEIDVLRRQAAQRFGG------NEKQAAELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ ++ E+ +++ + + + +++++ + + + +R E
Sbjct: 346 VVGLLLGEVISQHELKADEDRVKALIEEMASAY-EDPQEVIEFYSQNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + ++ +
Sbjct: 405 EQAVETLLAKAKVTEKPTTFSELMNQTTNA 434
>gi|256556951|gb|ACU83573.1| FKBP-type peptidyl-prolyl cis-trans isomerase [uncultured bacterium
HF130_AEPn_2]
Length = 436
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 98/453 (21%), Positives = 220/453 (48%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ + N+R++ KA I GFRPGKVP+S IK +G
Sbjct: 1 MQVSVENTTALERRMSITVPAERIETAVNKRLQQTAQKAKIAGFRPGKVPMSEIKRRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + ++I+ E + ++ A PSI +E DL+ +++
Sbjct: 61 DARQDAVGDVIQASFYEAVVEQKLNPAGSPSIEPKS---------LEAGKDLEYVAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ F+ +++ + EV + ++D + + K N FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFEGIEIERLSAEVADADLDNMLEILRKQNTRFEVADRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S K Q ++GS + + LVG K G+++ + FP D+ DLAGK
Sbjct: 172 VDGEVFAGGSAKGTQLVLGSNRMIPGFEDGLVGAKAGEERVLNLTFPADYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNSVSEPKLPELNEEFFAQFGIKETGIEGFRAEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ NE + + + + D+ + + AKRRV
Sbjct: 292 DGLLASNPIEVPKALLSNEVDRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ +++ E+ ++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFDLKPDEDRVREMIQEMASAY-QEPEQVVAWYYKNDQQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ ++ D+ V++++ + + +
Sbjct: 404 EQVVDTVLQKAKVTDKAVSYEEAVKPAEAAQAD 436
>gi|66472064|dbj|BAD98926.1| trigger factor tag [Expression vector pColdTF]
Length = 489
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 91/453 (20%), Positives = 210/453 (46%), Gaps = 18/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 12 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 71
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 72 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 122
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 123 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 182
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 183 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 242
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 243 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 302
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 303 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 356
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 357 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 415
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++ ++ +L ++ +++ TF++L + + + E
Sbjct: 416 EQAVEAVLAKAKVTEKETTFNELMNQQASAGLE 448
>gi|145298870|ref|YP_001141711.1| trigger factor [Aeromonas salmonicida subsp. salmonicida A449]
gi|166229011|sp|A4SM41|TIG_AERS4 RecName: Full=Trigger factor; Short=TF
gi|142851642|gb|ABO89963.1| trigger factor [Aeromonas salmonicida subsp. salmonicida A449]
Length = 436
Score = 268 bits (684), Expect = 1e-69, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ + + + + + I GFRPGK P++ IK ++G
Sbjct: 1 MQVSVETTQGLERRLTITVPAATVDAAVRKELNGLAKTRRIDGFRPGKAPVAIIKKMFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ DE+++ + + + A P++ E I+ D + ++++
Sbjct: 61 MAHARVADEMMQNNFIKAIIENKLSPAGAPTMDPKE---------IQEGQDFEFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ + ++V + + V ++++ + + K + + + + G +VT+D+ S
Sbjct: 112 YPEFEVAGLETIKVEKPVATVKDEDLANMIDTLRKQHATWADVDAAAADGMRVTMDFIGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + + ++G+ + + ++G K GD+ IE FP D+ ++L GK
Sbjct: 172 IDGEEFDGGKAEGFNLVLGAGRMIPGFEDAIMGKKAGDEFTIEVTFPADYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + + + R G E + ++ + +++ ++ VK Q+L
Sbjct: 232 KFASKLIKVEEQILPELTEEFVKRFGIESGNVEELKAEVRKNMERELAQALKNSVKEQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + D+P++ V E + + Q+ + E + + A+RRV
Sbjct: 292 NGLVEANQIDLPKAAVAQEIDTLRQQALQRFGGFQGGNA-----PELPAELFQAQAERRV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + N I+ + + S + + K++++++QK L +R E
Sbjct: 347 RVGLLLGDVIRTNEIKADDARVTSIIESMATAY-EDPKEVIEYYQKNEQMLNGVRNLAVE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
D+ ID IL Q+ +++V FD++ + S ++
Sbjct: 406 DQAIDLILSKAQVTEKEVAFDEVINKSGAAA 436
>gi|146341129|ref|YP_001206177.1| trigger factor [Bradyrhizobium sp. ORS278]
gi|166229019|sp|A4YVM6|TIG_BRASO RecName: Full=Trigger factor; Short=TF
gi|146193935|emb|CAL77952.1| Trigger factor (TF), molecular chaperone involved in cell division
[Bradyrhizobium sp. ORS278]
Length = 451
Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats.
Identities = 140/452 (30%), Positives = 259/452 (57%), Gaps = 3/452 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLK E + +P+ L + ++ D++ K I GFRPGKVP++H+K +YGK
Sbjct: 1 MQVTETLSEGLKHEFQISVPAADLDAKADAKLVDLKDKVRINGFRPGKVPVAHLKKIYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++ETID+ I++ +I ++R R A P +T+ E+++ + G DL ++ ++
Sbjct: 61 SVMAETIDQTIRDTNTQIFTERGFRLATEPKVTMPTEEAEVEKI-LAGQSDLTYSVAIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYT 178
+P I ++ F V + + ++ + ++D + +A N ++ K ++ D+V V++
Sbjct: 120 VPAITLADFKTFAVEKPVADITDADVDEAIKRLADANRSYAAKAEGAKAASGDRVKVNFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D V + + + + ++GS + LVG+ G+ + ++ FP ++ +LAGK
Sbjct: 180 GTIDGVAFDGGTGEGIDVVIGSNTFIPGFEDQLVGIAVGETRTLKVTFPTNYLNNELAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +P VV+++ A LG ES ++ L ++ RQ+VKR +L
Sbjct: 240 AAEFETTATAIEAPEDKVVDDEFAKTLGLESLDKLKELMRDRLAGEFTQATRQRVKRALL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD P SL++ E+N + V+ EM S+ + + ++ +++ + Y +A RRV
Sbjct: 300 DRLDETHKFDAPPSLIDEEFNLMWNSVQAEMKSSGKTFADENTTEDKAKEEYRTIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IGEKN I VT++E+ A+ ++ PG EK++ D ++ P ALA+LRAPI+E
Sbjct: 360 RLGLVLSEIGEKNKITVTDDEVSRAVIERARSMPGREKEVWDFYRSNPQALAQLRAPIYE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D IL+ + ++KV+ D+LF + + +
Sbjct: 420 DKVVDFILELANVTEKKVSKDELFKDDDDKAA 451
>gi|254704207|ref|ZP_05166035.1| trigger factor [Brucella suis bv. 3 str. 686]
gi|260566545|ref|ZP_05837015.1| trigger factor [Brucella suis bv. 4 str. 40]
gi|261754875|ref|ZP_05998584.1| trigger factor [Brucella suis bv. 3 str. 686]
gi|260156063|gb|EEW91143.1| trigger factor [Brucella suis bv. 4 str. 40]
gi|261744628|gb|EEY32554.1| trigger factor [Brucella suis bv. 3 str. 686]
Length = 477
Score = 268 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 173/471 (36%), Positives = 295/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ ++ IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDLSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAAPKKKAE 470
>gi|256061005|ref|ZP_05451162.1| trigger factor [Brucella neotomae 5K33]
Length = 471
Score = 268 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 175/471 (37%), Positives = 293/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E L K + + E E
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKLAKKAAAKKKAEEGKSEE 470
>gi|189024084|ref|YP_001934852.1| trigger factor [Brucella abortus S19]
gi|254697283|ref|ZP_05159111.1| trigger factor [Brucella abortus bv. 2 str. 86/8/59]
gi|254730182|ref|ZP_05188760.1| trigger factor [Brucella abortus bv. 4 str. 292]
gi|260545410|ref|ZP_05821151.1| trigger factor [Brucella abortus NCTC 8038]
gi|118574061|sp|Q2YNL3|TIG_BRUA2 RecName: Full=Trigger factor; Short=TF
gi|118574062|sp|Q57DK9|TIG_BRUAB RecName: Full=Trigger factor; Short=TF
gi|238689364|sp|B2S5D1|TIG_BRUA1 RecName: Full=Trigger factor; Short=TF
gi|189019656|gb|ACD72378.1| Peptidylprolyl isomerase, FKBP-type [Brucella abortus S19]
gi|260096817|gb|EEW80692.1| trigger factor [Brucella abortus NCTC 8038]
Length = 471
Score = 268 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 174/471 (36%), Positives = 292/471 (61%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + E E
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAEEGKSEE 470
>gi|123443343|ref|YP_001007317.1| trigger factor [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|332160748|ref|YP_004297325.1| trigger factor [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|166229954|sp|A1JNN4|TIG_YERE8 RecName: Full=Trigger factor; Short=TF
gi|122090304|emb|CAL13170.1| Trigger factor [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|318604627|emb|CBY26125.1| cell division trigger factor [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664978|gb|ADZ41622.1| trigger factor [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330859951|emb|CBX70280.1| trigger factor [Yersinia enterocolitica W22703]
Length = 434
Score = 268 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 85/450 (18%), Positives = 209/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + I GFR G VP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIEKAVKSELVKAAKNVRIDGFRKGHVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPN---------YVPGQYKEGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV++ ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKDLESIEVEKPVVEVNDADVDTMLETLRKQQATWKETDAAATAEDRATLDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +G + E ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEVFEGGKATDFVLAMGQGRMIPGFEEGVIGHKAGEEFTIDVNFPEDYHAENLKGKSA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEVRELPELTEEFIKRFGVADGSVAGLRAEVRKNMERELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +LVE E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANEIDVPAALVEGEIDVLRRQAAQRFGG------NEKQAAELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ ++ E+ +++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVISQHELKADEDRVKALIEEMASAY-EDPQEVIEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + ++ +
Sbjct: 405 EQAVETLLSKAKVTEKPTTFSELMNQTTTA 434
>gi|256113446|ref|ZP_05454287.1| trigger factor [Brucella melitensis bv. 3 str. Ether]
Length = 471
Score = 268 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 174/471 (36%), Positives = 292/471 (61%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGLEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + E E
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDEDAALEAKPAKKAAAKKKAEEGKSEE 470
>gi|161618858|ref|YP_001592745.1| trigger factor [Brucella canis ATCC 23365]
gi|161335669|gb|ABX61974.1| trigger factor [Brucella canis ATCC 23365]
Length = 479
Score = 268 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 173/471 (36%), Positives = 295/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 3 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 62
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ ++ IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 63 SFMAEIVNEILNDLSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 121
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 122 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 182 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 242 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 301
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 302 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 361
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 362 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 421
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 422 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAAPKKKAE 472
>gi|319407118|emb|CBI80755.1| trigger factor [Bartonella sp. 1-1C]
Length = 475
Score = 268 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 167/465 (35%), Positives = 280/465 (60%), Gaps = 5/465 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ +++P L NER++D + K +KGFRPGKVP H++ +YGK
Sbjct: 1 MQVTEMLNEGLKREIKIVVPVKDLEAKLNERLDDTKGKIKLKGFRPGKVPSDHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EII + IL++R+E +AM+P I I D +I+G D L Y++
Sbjct: 61 SFMAEILNEIINDAPRSILAERNEYSAMQPQIDI-----DEDKKVIDGKADFVFSLKYEV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+ E+ F ++++ ++I ++ E+E+D Q+ I + ++ K S+ D++T+DY
Sbjct: 116 LPKFEVKDFKNIEIVREIADIPEQEVDEQVTRILSSTRSYSQKNGPSKEDDRITIDYLGK 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V + S K+ Q I+GS E L+GLK GD K I FP+D+S LA K
Sbjct: 176 IDGVPFDGGSDKDAQLILGSKQFIPGFEEQLIGLKAGDVKTISVKFPDDYSAAHLASKNA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K V P + ++++ A +LG ES +R + +++ + RQK+KRQ+LD
Sbjct: 236 EFDITVKTVAKPDELKIDDEAAKKLGLESLDRLREVVRGQVESRYGSMTRQKIKRQVLDA 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+FD+PE L+E E+N I + ++ + ++ +E+ + Y MLAKRRV
Sbjct: 296 LDADYSFDIPEQLLEIEFNNIWNHINEDLKRMGKSFEDEGITEEQAREEYRMLAKRRVRL 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IG K ++V+E+E+++A+++Q+ ++PG EK+M+D F++ P A+A LRAPIFE+K
Sbjct: 356 GLVLSEIGTKVGVQVSEDELKAAVFEQVRQYPGQEKEMMDFFRRTPEAIANLRAPIFEEK 415
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
VID++L ++I D+KVT ++L E+ K +
Sbjct: 416 VIDYLLTQIKITDKKVTIEELMKEYDEAGLTDKTSAKKKSAVKEK 460
>gi|110634141|ref|YP_674349.1| trigger factor [Mesorhizobium sp. BNC1]
gi|118574075|sp|Q11HE1|TIG_MESSB RecName: Full=Trigger factor; Short=TF
gi|110285125|gb|ABG63184.1| trigger factor [Chelativorans sp. BNC1]
Length = 476
Score = 268 bits (683), Expect = 2e-69, Method: Composition-based stats.
Identities = 159/459 (34%), Positives = 278/459 (60%), Gaps = 2/459 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E + GLKRE+ + +P+ + R+ED ++K +KGFRPGKVPL H++ +YGK
Sbjct: 1 MQVSEILNSGLKREIKITVPAEDMEARLMARLEDAKNKVRLKGFRPGKVPLQHLRRMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + I+S R E+ AM+P I++ E E + ++ G D + LSY++
Sbjct: 61 SFMAEVVNEILNDSSRTIISDRGEKPAMQPEISMTEDEKE-AEKVLAGAADFEFSLSYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P IEI +++T+ + +V ++E+D Q+ +A + +E K+ ++E GDKVT+DY
Sbjct: 120 IPPIEIKDLAGIKITRPVYDVPDEEVDEQVKRVADSVRTYEAKKGKAEKGDKVTLDYVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + S + + ++G + L+GLK GD K + FPE + + LAGK+
Sbjct: 180 LDGEPFDGGSANDSEVVIGHGQFIPGFEDELIGLKAGDTKTFKITFPETYGAQHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV + +V++++LA +LG ES +R + +++ + RQK KRQ+LD
Sbjct: 240 EFDVTVKEVAAAEELVIDDELAKKLGLESAEKLREIIRSQLENQYGQMTRQKAKRQLLDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P LVE E+N I +V ++ SA + ++ ++ +++ Q Y LA+RRV
Sbjct: 300 LDESYKFEAPSKLVEAEFNNIWSQVTRDLESAGRTFEDEETTEDDARQEYQRLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP-GHEKKMLDHFQKYPNALAELRAPIFED 419
G+VL IGE+ +I+V+++EMQ AL + + R+P ++++ D +++ P ALA +RAP+FE+
Sbjct: 360 GLVLAQIGEEASIQVSDDEMQRALIETIRRYPAQQQQEIYDFYRQNPQALASVRAPLFEE 419
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSS 458
KV+D +L V + D+KV+ D+L EK +
Sbjct: 420 KVVDQLLSQVDVTDQKVSRDELLAEDEAEGEEKKAAGET 458
>gi|77459920|ref|YP_349427.1| trigger factor [Pseudomonas fluorescens Pf0-1]
gi|119370921|sp|Q3K9W8|TIG_PSEPF RecName: Full=Trigger factor; Short=TF
gi|77383923|gb|ABA75436.1| trigger factor [Pseudomonas fluorescens Pf0-1]
Length = 436
Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 102/453 (22%), Positives = 216/453 (47%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S IK +G
Sbjct: 1 MQVSVENTTALERRMSITVPAERIETQVNKRLQQTAQKAKIAGFRPGKVPMSEIKRRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E I ++I+ E + ++ A PSI +E DL+ +++
Sbjct: 61 DARQEAIGDVIQSSFYEAVVEQKLNPAGSPSIEPKS---------LEAGKDLEYVAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ F+ + V + +V + ++D+ + + K N FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFEGITVERLSADVADADLDKMLDILRKQNTRFEVADRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S K Q ++GS + E LVG K G+++ + FPED+ DLAGK
Sbjct: 172 VDGEVFAGGSAKGTQLVLGSGRMIPGFEEGLVGAKAGEERVLNLTFPEDYQNLDLAGKTA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNTVSEPKLPELNEEFFAQFGIKESGIDGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ NE + + + + D+ + + AKRRV
Sbjct: 292 DGLLATNPIEVPKALLSNEVDRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ +++ E ++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFDLKPDEARVREMIQEMASAY-QEPEQVVSWYYKNEQQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKASVTDKSVSYEEAVKPVEAPKAD 436
>gi|239831776|ref|ZP_04680105.1| trigger factor [Ochrobactrum intermedium LMG 3301]
gi|239824043|gb|EEQ95611.1| trigger factor [Ochrobactrum intermedium LMG 3301]
Length = 485
Score = 267 bits (682), Expect = 2e-69, Method: Composition-based stats.
Identities = 172/451 (38%), Positives = 286/451 (63%), Gaps = 1/451 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L +ER+E R +A I GFRPGKVP H++ +YGK
Sbjct: 9 MQVTETLNEGLKREIKVVVPAKDLEAKLSERLETARGRAKINGFRPGKVPAGHLRKMYGK 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL+ R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 69 SFMAEIVNEILNDSSRSILADRNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 128 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E LVGLK GD+K I FP ++ LAGK+
Sbjct: 188 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLVGLKAGDEKVINVTFPAEYGAAHLAGKEA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 248 TFDIKVKEVAKPNELVLDDEAAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 307
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 308 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 367
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ + +K P+A+A LRAPIFE+K
Sbjct: 368 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYEFLRKTPDAVANLRAPIFEEK 427
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
V+DH+L ++ + D+KV+ ++L +++ E
Sbjct: 428 VVDHLLANISVTDKKVSKEELTAEDEDAASE 458
>gi|23501784|ref|NP_697911.1| trigger factor [Brucella suis 1330]
gi|23347715|gb|AAN29826.1| trigger factor [Brucella suis 1330]
Length = 485
Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 172/471 (36%), Positives = 294/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 9 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ ++ IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 69 SFMAEIVNEILNDLSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 128 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 188 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 248 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQVTRQKVKRQILDA 307
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 308 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 367
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+P EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 368 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPDQEKEIYDFLRRTPDAVANLRAPIFEEK 427
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 428 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAAPKKKAE 478
>gi|227821953|ref|YP_002825924.1| trigger factor [Sinorhizobium fredii NGR234]
gi|254789015|sp|C3MBV9|TIG_RHISN RecName: Full=Trigger factor; Short=TF
gi|227340953|gb|ACP25171.1| trigger factor [Sinorhizobium fredii NGR234]
Length = 491
Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 170/449 (37%), Positives = 286/449 (63%), Gaps = 1/449 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKREL V+IP++ + NER+ D++ + I GFRPGKVP++H+K +YGK
Sbjct: 1 MQVIETLAEGLKRELKVVIPADEMQTRMNERLADVKDRVRINGFRPGKVPVAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI++E ++EI+++ EIL+ R E++A +P + + E E++ +++ D + L+Y+I
Sbjct: 61 SIMAELVNEIVRDKPTEILTSRGEKSATQPEVAMTEDEAE-ADKILKAEADFEFTLAYEI 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P IE+ ++VT+++ E+ E E++ Q+ IA++ +E K+ ++ GD+VT+DY
Sbjct: 120 IPAIELKDATGIKVTREVVEIAEDEVNEQILRIAESARTYESKKGKAANGDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD V + ++ + ++GS E LVG+K GD+K I FP D+ +LAGK+
Sbjct: 180 VDGVAFDGGKDEDAELVLGSNRFIPGFEEQLVGVKAGDEKTITVTFPADYPAANLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K+V + P+ +N++LA +LG ES ++ + +I+ + RQKVKRQ+LD
Sbjct: 240 TFDITVKDVAAAAPIEINDELATKLGLESADKLKEIVRGQIESQYGSVTRQKVKRQLLDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ PE LV E+ I +++ ++ A + + D+ +EE Y LA+RRV
Sbjct: 300 LDELYQFETPERLVNAEFENIWRQINTDLEQAGKTFADEDTTEEEARAEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK ++V+++EMQ +L++QL +FPG EK++LD+F+ P A A LRAP+FE+K
Sbjct: 360 GLVLSEIGEKAGVQVSDDEMQRSLFEQLRQFPGQEKQILDYFKNTPGAAASLRAPLFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESS 449
V+DH+L V + D+ V+ D+L
Sbjct: 420 VVDHLLSEVAVTDKTVSKDELMAEDEAED 448
>gi|238791430|ref|ZP_04635068.1| Trigger factor [Yersinia intermedia ATCC 29909]
gi|238729046|gb|EEQ20562.1| Trigger factor [Yersinia intermedia ATCC 29909]
Length = 434
Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 85/450 (18%), Positives = 208/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + I GFR G VP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIEKAVKSELVKAAKSVRIDGFRKGHVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPN---------YVPGEYKQGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV++ ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKDLESIEVEKPVVEVNDADVDTMLETLRKQQATWKDTDAAATAEDRATLDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + E ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKASDFVLAMGQGRMIPGFEEGVIGHKAGEEFTIDVNFPEDYHAENLKGKSA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEVRELPELTEEFIKRFGVADGSVAGLRAEVRKNMERELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +LVE E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANAIDVPAALVEGEIDVLRRQAAQRFGG------NEKQAAELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ ++ E+ +++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVISQHELKADEDRVKALIEEMASAY-EDPQEVVEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + ++ +
Sbjct: 405 EQAVETLLAKAKVTEKPTTFSELMNQTTAA 434
>gi|254701663|ref|ZP_05163491.1| trigger factor [Brucella suis bv. 5 str. 513]
gi|261752216|ref|ZP_05995925.1| trigger factor [Brucella suis bv. 5 str. 513]
gi|261741969|gb|EEY29895.1| trigger factor [Brucella suis bv. 5 str. 513]
Length = 477
Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 173/471 (36%), Positives = 295/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ ++ IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDLSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQITRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVCRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAAPKKKAE 470
>gi|260459811|ref|ZP_05808065.1| trigger factor [Mesorhizobium opportunistum WSM2075]
gi|259034613|gb|EEW35870.1| trigger factor [Mesorhizobium opportunistum WSM2075]
Length = 497
Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 157/451 (34%), Positives = 271/451 (60%), Gaps = 2/451 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E + GLKRE+ + +P+ + R+ D R+K I GFRPGKVP+ H++ +YGK
Sbjct: 1 MQVTETLNSGLKREIKITVPAGDMEAKLMARLSDARNKVRINGFRPGKVPVQHLRKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + I++ R E+AAM+P + + E E + + G D + RL+Y++
Sbjct: 61 SFMAEVVNEILNDSTRSIITGRGEKAAMQPEVIMTEDEKEAEKI-LAGGADFEFRLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P IEI F D++VT+ + +V E EID Q+ +A++ ++E K ++ GD+V++DY
Sbjct: 120 IPAIEIKDFSDIKVTRQVYDVPETEIDEQVKRVAESARSYEPKTGKAAEGDRVSIDYVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + + ++GS + + L+G K GD+K++ FPE++ LAGK+
Sbjct: 180 IDGEAFAGGAGNDQPLVLGSKEFIPGFEDQLIGSKAGDEKQVTVTFPENYQAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV P + +N++ A LG +S +R + +I+ + RQKVKRQ+LD
Sbjct: 240 TFDVTVKEVSKPGELEINDETAKNLGLDSLERLREIVRGQIENQFGSMTRQKVKRQLLDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+F+ P LVE E+N I +V ++ +A + + ++ +EE Y LA+RRV
Sbjct: 300 LDAAYSFEAPSKLVEAEFNNIWAQVNRDLEAAGRTFADEETTEEEARAEYMRLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP-GHEKKMLDHFQKYPNALAELRAPIFED 419
G+VL IGEK + V++EE+Q L++Q+ RFP +++ + ++ P AL LRAP+FE+
Sbjct: 360 GLVLAEIGEKAGVTVSDEELQRGLFEQVRRFPANQQQEAFEFYRNNPEALNALRAPMFEE 419
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
KV+DH+L + + D KV+ ++L + E+
Sbjct: 420 KVVDHLLGQISVTDVKVSKEELMADDEEAET 450
>gi|294852254|ref|ZP_06792927.1| trigger factor tig [Brucella sp. NVSL 07-0026]
gi|294820843|gb|EFG37842.1| trigger factor tig [Brucella sp. NVSL 07-0026]
Length = 477
Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 172/471 (36%), Positives = 294/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDSSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + V +++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVAREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ ++RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQIIRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+PG EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPGQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAAPKKKAE 470
>gi|238788007|ref|ZP_04631803.1| Trigger factor [Yersinia frederiksenii ATCC 33641]
gi|238723955|gb|EEQ15599.1| Trigger factor [Yersinia frederiksenii ATCC 33641]
Length = 434
Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 85/450 (18%), Positives = 209/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + I GFR G VP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIEKAVKSELVKAAKNVRIDGFRKGHVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPN---------YVPGEYKQGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV++ ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKDLESIEVEKPVVEVNDADVDTMLETLRKQQATWKETDAAATAEDRATLDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +G + E ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEVFEGGKATDFVLAMGQGRMIPGFEEGVIGHKAGEEFTIDVNFPEDYHAENLKGKSA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEVRELPELTEEFIKRFGVADGSVAGLRAEVRKNMERELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +LVE E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANEIDVPAALVEGEIDVLRRQAAQRFGG------NEKQAAELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ ++ E+ +++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVISQHELKADEDRVKALIEEMASAY-EDPQEVIEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + ++ +
Sbjct: 405 EQAVETLLAKAKVTEKPTTFSELMNQTTTA 434
>gi|253687442|ref|YP_003016632.1| trigger factor [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|259533625|sp|C6DB54|TIG_PECCP RecName: Full=Trigger factor; Short=TF
gi|251754020|gb|ACT12096.1| trigger factor [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 434
Score = 267 bits (681), Expect = 3e-69, Method: Composition-based stats.
Identities = 90/450 (20%), Positives = 212/450 (47%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + + K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADIIESAVKSELVNAAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K P+ G D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPVGAPN---------YIPGEYAVGGDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + EV + ++D + + K ++ + + D+VT+D+T S
Sbjct: 112 YPEVELKGLDAIEVEKPVVEVTDADVDTMLETLRKQQATWKETDRAAAAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +G + + +VG K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEVFEGGKASDFVLAMGQNRMIPGFEDGVVGHKAGEEFTIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + R G + +R + +++ + VR +VK Q+L
Sbjct: 232 QFAIVLKKVEERELPELTEEFIKRFGVADGSQEGLRAEVRKNMERELKGAVRNRVKTQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N DVP +L++ E + + ++ +++Q E + + AKRRV
Sbjct: 292 DGLINANEIDVPAALIDGEIDVLRRQAAQRFGGNEKQAQ------ELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ E + + + + + +++++ + K L +R E
Sbjct: 346 VIGLLLGEVISSNELKADEARVNALIEEMASAY-EDPQEVIEFYGKNKELLNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++V++ V+F++L + ++ +
Sbjct: 405 EQAVETVLAKAKVVEKSVSFNELMNQTATA 434
>gi|114569887|ref|YP_756567.1| trigger factor [Maricaulis maris MCS10]
gi|122316142|sp|Q0AQ08|TIG_MARMM RecName: Full=Trigger factor; Short=TF
gi|114340349|gb|ABI65629.1| trigger factor [Maricaulis maris MCS10]
Length = 518
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 142/451 (31%), Positives = 258/451 (57%), Gaps = 8/451 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M VIEK SEGL R +++IP++ L +IE+IR + +KGFRPGKVP SHI+ ++G+
Sbjct: 1 MNVIEKASEGLSRTYEIVIPADDLQARLAAKIEEIRPEVRLKGFRPGKVPTSHIRKMFGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+ + ++E++ + + L ++ R A +P I++ D+ +G D ++ +I
Sbjct: 61 SIMGDLLNELVPDTTQKTLDEKKLRPASQPDISVTSEAKDVLAGK----ADFVFEIALEI 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQM----AEIAKNNVAFEVKETESEIGDKVTVD 176
+P E + L VT+ + EV++ E+D + E + K ++E GD V +D
Sbjct: 117 MPDFEPADPAKLSVTRPVAEVEDAEVDEALERLANESREFAAKKGGKNAKAEDGDVVVID 176
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ +D + E S ++ + +G E L+G K G+++E+ FPED+ LA
Sbjct: 177 FVGKLDGEVFEGGSAEDARVAIGDGAFIPGFEEQLLGAKVGEERELNVTFPEDYQAAQLA 236
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
GK + ++K + SP V+++LA RLG E+ ++ ++ R KVKR
Sbjct: 237 GKAAVFDVTVKGLESPQEAKVDDELAKRLGLENLDGLKDALKKRFAGEHGQQSRMKVKRD 296
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+LD + ++ FD+P +V E++ I ++V + + ++ + ++E Y +A+R
Sbjct: 297 LLDKLDAEHKFDLPPKMVGAEFDNIWREVAHAIEQDQLEDEDKNKSEDELKSEYREIAER 356
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+VL IG +NNI+VT+EE+ A+ Q+ ++PG E+++++ +QK PNA+A++RAPI
Sbjct: 357 RVRLGLVLAEIGRRNNIDVTQEELSRAINQEAVKYPGQERQVVEFYQKNPNAVAQMRAPI 416
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+E+KV+D+IL+ + + V+ + L+ + E
Sbjct: 417 YEEKVVDYILELADVTETTVSKEALYADEDE 447
>gi|227328848|ref|ZP_03832872.1| trigger factor [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 434
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 91/450 (20%), Positives = 211/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + + K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADIIESAVKSELVNAAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K P+ G D + +D+
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPVGAPN---------YIPGEYAVGGDFTYSVEFDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ D ++V + + EV + ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEIELKGLDAIEVEKPVVEVTDADVDTMLDTLRKQQATWKETDRAAAAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +G + + +VG K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEVFEGGKASDFVLAMGQNRMIPGFEDGIVGHKAGEEFTIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + R G + +R + +++ + VR +VK Q+L
Sbjct: 232 QFAIVLKKVEERELPELTEEFIKRFGVADGSQEGLRAEVRKNMERELKGAVRNRVKTQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N DVP +L++ E + + ++ +++Q E + + AKRRV
Sbjct: 292 DGLINANEIDVPVALIDGEIDVLRRQAAQRFGGNEKQAQ------ELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ E + + + + + +++++ + K L +R E
Sbjct: 346 VIGLLLGEVISTNELKADEARVNALIEEMASAY-EDPQEVIEFYSKNKELLNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++V++ V+F++L + ++ +
Sbjct: 405 EQAVETVLAKAKVVEKSVSFNELMNQTTTA 434
>gi|227113464|ref|ZP_03827120.1| trigger factor [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 434
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 91/450 (20%), Positives = 211/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + + K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADIIESAVKSELVNAAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K P+ G D + +D+
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPVGAPN---------YIPGEYAVGGDFTYSVEFDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ D ++V + + EV + ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEIELKGLDAIEVEKPVVEVTDADVDTMLDTLRKQQATWKETDRAAAAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +G + + +VG K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEVFEGGKASDFVLAMGQNRMIPGFEDGVVGHKAGEEFTIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + R G + +R + +++ + VR +VK Q+L
Sbjct: 232 QFAIVLKKVEERELPELTEEFIKRFGVADGSQEGLRAEVRKNMERELKGAVRNRVKTQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N DVP +L++ E + + ++ +++Q E + + AKRRV
Sbjct: 292 DGLINANEIDVPVALIDGEIDVLRRQAAQRFGGNEKQAQ------ELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ E + + + + + +++++ + K L +R E
Sbjct: 346 VIGLLLGEVISTNELKADEARVNALIEEMASAY-EDPQEVIEFYSKNKELLNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++V++ V+F++L + ++ +
Sbjct: 405 EQAVETVLAKAKVVEKSVSFNELMNQTTTA 434
>gi|182679148|ref|YP_001833294.1| trigger factor [Beijerinckia indica subsp. indica ATCC 9039]
gi|238691228|sp|B2IGP4|TIG_BEII9 RecName: Full=Trigger factor; Short=TF
gi|182635031|gb|ACB95805.1| trigger factor [Beijerinckia indica subsp. indica ATCC 9039]
Length = 460
Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats.
Identities = 152/446 (34%), Positives = 260/446 (58%), Gaps = 4/446 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E S+GLKRE V++P+ + +E+++++++K I GFRPGKVP++H+K LYG+
Sbjct: 1 MQVTETLSQGLKREYKVVLPAADIASRLDEQLQEMKAKVRINGFRPGKVPVAHLKRLYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ + + E + E +IL + + R A P I + + D+ E T D +++ +I
Sbjct: 61 SVMLDVVQEAVNEANRKILEENNLRPAGEPRIDFDGEKEDMEKA-FESTADFAFKVALEI 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP+ EI F+D+ + + + +V E+E++R + A N A+E + +E GDKVT+D+
Sbjct: 120 LPKFEIGGFEDIAIERFVADVPEEEVERILGRFADQNRAYEPRAEGAAAEKGDKVTIDFV 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E S +++ ++GS + ++GLK G+Q++I FPED++ LAGK
Sbjct: 180 GKIDGEPFEGGSGEDIDLVLGSESFIPGFEDQVIGLKVGEQRQIAVTFPEDYA-AKLAGK 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V +P ++++LA G+E+ AM+ I R + KR +L
Sbjct: 239 AATFDVTVKQVAAPGEQTIDDELAKAFGYETLEAMKEQIRTTISDEYAAASRAQWKRALL 298
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + KY F++PE LVENE+ + +KV + + + + + +E Y +A+RRV
Sbjct: 299 DELDKKYQFELPEGLVENEFATVWRKVELDQQRSGKTFEEEGTTEEAARADYRKIAERRV 358
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IGEK I V +EE+ AL ++ FPG EK + D +++ P AL E+RAP+FE
Sbjct: 359 RLGLLLAEIGEKAGIVVPDEEVGKALVERARAFPGQEKMIWDFYRQNPKALNEIRAPLFE 418
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
DK +D+IL ++ D KV+ D+L
Sbjct: 419 DKTVDYILTQAKVTDTKVSKDELLKK 444
>gi|226944445|ref|YP_002799518.1| trigger factor [Azotobacter vinelandii DJ]
gi|259533551|sp|C1DHE8|TIG_AZOVD RecName: Full=Trigger factor; Short=TF
gi|226719372|gb|ACO78543.1| trigger factor [Azotobacter vinelandii DJ]
Length = 436
Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats.
Identities = 103/452 (22%), Positives = 214/452 (47%), Gaps = 19/452 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R L + +P+ R+ N+R++ +A I GFRPGKVP+S I+ Y +
Sbjct: 1 MQVSVESTSALERRLTIGVPAERIETEVNKRLQQTARRAKIPGFRPGKVPMSVIRQRYEE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S E + E+I+ E + ++ + A PS+ + E DL+ ++++
Sbjct: 61 SARQEALGELIQASFYEAVVEQKLKPAGAPSVEPK---------VFEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ EI+ + + V + EV E ++D + + K N ++ E E+ GD++ +D+
Sbjct: 112 YPEFEITGLESIAVERLQAEVAESDVDNMLEILRKQNTHYKQVEREARDGDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD S K ++GS + LVG K G+++ + FP D+ DLAGK
Sbjct: 172 VDGEAFAGGSAKGTLLVLGSGRMIEGFEAGLVGAKAGEERVLSLTFPADYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +N D G S A R + +++ ++ KVK Q++
Sbjct: 232 EFAVTVNSVSEAELPELNADFFSLFGINESSLEAFRAEVGKNMERELRQAIKSKVKTQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + ++ + AKRRV
Sbjct: 292 DGLLAANPVEVPKALIENEVNRLRVQAVQQFGGN-------IKPEQLPADLFQDQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++ +++ E ++++ + + + ++++ + L+E+R+ + E
Sbjct: 345 TLGLIVAEMVKQFDLKPDESKVKTLIEEIASAY-QEPEQVVAWYYGNEQQLSEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
++V+D +L+ + D+ V++++ +
Sbjct: 404 EQVVDTVLQKANVTDKAVSYEEAVKPAEAPQA 435
>gi|319404104|emb|CBI77694.1| trigger factor [Bartonella rochalimae ATCC BAA-1498]
Length = 475
Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 167/465 (35%), Positives = 280/465 (60%), Gaps = 5/465 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ +++P L NER++D + K +KGFRPGKVP H++ +YGK
Sbjct: 1 MQVTEMLNEGLKREIKIVVPVKDLEAKLNERLDDTKGKIKLKGFRPGKVPSDHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EII + IL++R+E +AM+P I I D +I+G D L Y++
Sbjct: 61 SFMAEILNEIINDAPRSILAERNEYSAMQPQIDI-----DEDKKVIDGKADFVFSLKYEV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+ E+ F ++++ ++I ++ E+E+D Q+ I + ++ K S+ D++T+DY
Sbjct: 116 LPKFEVKDFKNIEIVREIADIPEQEVDEQVTRILSSTRSYSQKNGPSKEDDRITIDYLGK 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V + S K+ Q I+GS E L+GLK GD K I FP+D+S LA K
Sbjct: 176 IDGVPFDGGSDKDAQLILGSKQFIPGFEEQLIGLKAGDVKTISVKFPDDYSAAHLASKNA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K V P + ++++ A +LG ES +R + +++ + RQK+KRQ+LD
Sbjct: 236 EFDITVKTVAKPDELKIDDEAAKKLGLESLDRLREVVRGQVESRYGSMTRQKIKRQVLDA 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+FD+PE L+E E+N I + ++ + ++ +E+ + Y MLAKRRV
Sbjct: 296 LDADYSFDIPEQLLEIEFNNIWNHINEDLKRMGKSFEDEGITEEQAREEYRMLAKRRVRL 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IG K ++V+E+E+++A+++Q+ ++PG EK+M+D F++ P A+A LRAPIFE+K
Sbjct: 356 GLVLSEIGTKVGVQVSEDELKAAVFEQVRQYPGREKEMMDFFRRTPEAVANLRAPIFEEK 415
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
VID++L ++I D+KVT ++L E+ K +
Sbjct: 416 VIDYLLTQIKITDKKVTIEELMKEYDEAGLTDKTSAKKKSAVKEK 460
>gi|238765434|ref|ZP_04626355.1| Trigger factor [Yersinia kristensenii ATCC 33638]
gi|238696328|gb|EEP89124.1| Trigger factor [Yersinia kristensenii ATCC 33638]
Length = 434
Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 85/450 (18%), Positives = 210/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + I GFR G VP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIEKAVKSELVKAAKNVRIDGFRKGHVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPN---------YVPGQYKEGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV++ ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKDLESIEVEKPVVEVNDADVDTMLETLRKQQATWKETDAAATAEDRATLDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +G + E ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEVFEGGKATDFVLAMGQGRMIPGFEEGVIGHKAGEEFTIDVNFPEDYHAENLKGKSA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEVRELPELTEEFIKRFGVADGSVAGLRAEVRKNMERELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +LVE+E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANEIDVPAALVESEIDVLRRQAAQRFGG------NEKQAAELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ ++ E+ +++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVISQHELKADEDRVKALIEEMASAY-EDPQEVVEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + ++ +
Sbjct: 405 EQAVETLLAKAKVTEKPTTFSELMNQTTTA 434
>gi|38258387|sp|Q8G129|TIG_BRUSU RecName: Full=Trigger factor; Short=TF
Length = 477
Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 172/471 (36%), Positives = 294/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ L ER+E R +A I GFRPGKVP +H++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKVVVPAGDLEAKLAERLETARGRARINGFRPGKVPTAHLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ ++ IL++R+E++A +P + ++E E + +++G D L+Y++
Sbjct: 61 SFMAEIVNEILNDLSRSILAERNEKSATQPEVIMSEDEKE-AEKVLDGKADFVFSLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ F + VT+++ ++ ++E+D Q+ IA + FE K+ ++E D+VT+DY
Sbjct: 120 LPAIEVKDFSKIAVTREVVDISDEEVDEQVKRIASSTRTFETKKGKAENEDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + Q ++GS E L+GLK GD+K I FP ++ LAGK+
Sbjct: 180 LDGEPFEGGADNDAQLVLGSGQFIPGFEEQLIGLKAGDEKVITVTFPAEYGAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +KEV P +V++++ A +LG ES +R + ++I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKEVAKPNELVLDDETAKKLGIESLERLRQVVREQIESQYGQVTRQKVKRQILDA 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P+ LV+ E+N I Q++ F++ A + ++ ++ +E + Y LA+RRV
Sbjct: 300 LDGDYQFETPQKLVDAEFNNIWQQINFDLQQAGRTFEDEETTEEAAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEE+Q A+Y Q+ R+P EK++ D ++ P+A+A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEELQRAVYDQVRRYPDQEKEIYDFLRRTPDAVANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
V+DH+L ++ + D+KV+ ++L +++ E K + + + + +E
Sbjct: 420 VVDHLLANINVTDKKVSKEELTAEDEDAASEAKPAKKAAAKKKAAPKKKAE 470
>gi|327480672|gb|AEA83982.1| trigger factor [Pseudomonas stutzeri DSM 4166]
Length = 436
Score = 266 bits (679), Expect = 5e-69, Method: Composition-based stats.
Identities = 104/452 (23%), Positives = 218/452 (48%), Gaps = 19/452 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P R+ N+R++ S+A I GFRPGKVP+S I+ Y +
Sbjct: 1 MQVSVESTSALERRMTIGVPVERIETEVNKRLQQTASRAKIPGFRPGKVPMSVIRQRYEE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + ++I+ E + A PS+ + E DL+ ++++
Sbjct: 61 AARQEALGDLIQSTFYEAIVAEKLNPAGAPSVEPK---------VFEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ +++ + EV + ++D + + K N FE E +E GD+V +D+
Sbjct: 112 FPEFEVAGFEAIEIERLQAEVTDADVDNMLEILRKQNTRFESVERAAENGDQVNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S K Q ++GS + + LVG K GD++ I FPED+ DLAGK
Sbjct: 172 IDGEAFAGGSAKGTQLVLGSGRMIPGFEDALVGAKAGDERVITPTFPEDYQNLDLAGKTA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNSVAAPQLPELNEEFFAQFGVQEGGVEGFRAEVKKNMERELRQAIKTKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +VP++LV+NE N + + + D+ + + AKRRV
Sbjct: 292 EGLVAGNPIEVPKALVDNEVNRLRVQAVQQFGGN-------IKPDQLPAELFQEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ ++ E ++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQKELKPDEARVRELIEEMASAY-QEPEQVVAWYYKNAEQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
++V+D +L+ ++ D+ V++++ +
Sbjct: 404 EQVVDTVLQQAKVTDKSVSYEEAVKPAEAPQA 435
>gi|312961790|ref|ZP_07776288.1| Trigger factor [Pseudomonas fluorescens WH6]
gi|311284049|gb|EFQ62632.1| Trigger factor [Pseudomonas fluorescens WH6]
Length = 436
Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats.
Identities = 103/453 (22%), Positives = 221/453 (48%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + ++R L + +P+ R+ + N+R++ KA I GFRPGKVP+S IK +G
Sbjct: 1 MQVSVENTTAIERRLSITVPAERIETAVNKRLQQTAQKAKIAGFRPGKVPMSEIKRRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + + A PSI +E DL+ +++
Sbjct: 61 DARQEAVGDVIQASFYEAVVEHKLNPAGSPSIEPKS---------LEAGKDLEYVAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ FD ++V + +V + ++D + + K N FEV + ++ D++ +D+
Sbjct: 112 FPEFEVAGFDGIEVERLSADVADADLDNMLEILRKQNTRFEVADRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S K Q ++GS + + LVG K G++ ++ FP D+ DLAGK V
Sbjct: 172 VDGEVFAGGSAKGTQLVLGSNRMIPGFEDGLVGAKAGEEHVLKLEFPADYQNLDLAGKAV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNSVSEPKLPELNEEFFAQFGIKETGIEGFRTEVRKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ NE + + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLSNEVDRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+V+ + ++ +++ E+ ++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLVVAEVVKQFDLKPDEDRVREMIQEMASAY-QEPEQVVAWYYKNDQQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
++V+D +L+ ++ D+ V++++ + + +
Sbjct: 404 EQVVDTVLQKAKVTDKAVSYEEAVKPAQAAQAD 436
>gi|50120086|ref|YP_049253.1| trigger factor [Pectobacterium atrosepticum SCRI1043]
gi|67461746|sp|Q6D828|TIG_ERWCT RecName: Full=Trigger factor; Short=TF
gi|49610612|emb|CAG74057.1| trigger factor [Pectobacterium atrosepticum SCRI1043]
Length = 434
Score = 266 bits (678), Expect = 6e-69, Method: Composition-based stats.
Identities = 89/450 (19%), Positives = 208/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + + K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADIIESAVKSELVNAAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K P+ T E D + +D+
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPVGAPNYTPGEYAV---------GGDFTYTVEFDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV + ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKGLEAIEVEKPVVEVTDADVDTMLDTLRKQQATWKETDRAATAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +G + + + +VG K G++ I FPED+ ++L GK
Sbjct: 172 IDGEVFEGGKASDFVLAMGQSRMIPGFEDGIVGHKAGEEFTINVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + R G + +R + +++ + VR +VK Q+L
Sbjct: 232 QFVIVLKKVEERELPELTEEFIKRFGVADGSQEGLRAEVRKNMERELKGAVRNRVKTQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N +VP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 DGLINANDIEVPVALIDGEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ E + + + + +++++ + K L +R E
Sbjct: 346 VIGLLLGEVISSNELKADEARVNVLIEEMASAY-EDPQEVIEFYSKNKELLNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++V++ V+F++L + ++ +
Sbjct: 405 EQAVETVLAKAKVVEKSVSFNELMNQTTTA 434
>gi|13471160|ref|NP_102729.1| trigger factor [Mesorhizobium loti MAFF303099]
gi|21264079|sp|Q98LE8|TIG_RHILO RecName: Full=Trigger factor; Short=TF
gi|14021904|dbj|BAB48515.1| trigger factor [Mesorhizobium loti MAFF303099]
Length = 492
Score = 266 bits (678), Expect = 7e-69, Method: Composition-based stats.
Identities = 154/451 (34%), Positives = 271/451 (60%), Gaps = 2/451 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E + GLKRE+ + +P+ + R+ D R+K I GFRPGKVP+ H++ +YGK
Sbjct: 1 MQVTETLNSGLKREIKITVPAGDMEAKLMARLSDARNKVRINGFRPGKVPVQHLRKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EI+ + I++ R E+AAM+P + + E E + + G D + RL+Y++
Sbjct: 61 SFMAEVVNEILNDSTRSIITGRGEKAAMQPEVIMTEDEKEAEKI-LAGGTDFEFRLNYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P IEI F D++VT+ + +V + EID Q+ +A++ ++E K ++ GD+V++DY
Sbjct: 120 IPAIEIKDFSDIKVTRQVFDVPDAEIDDQVKRVAESARSYEPKTGKAAEGDRVSIDYVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + + ++GS + + L+G K GD+K++ FPE++ LAGK+
Sbjct: 180 IDGEAFAGGAGTDQLLVLGSKEFIPGFEDQLIGTKAGDEKQVTVTFPENYQAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV P + +N++ A LG ES +R + +I+ + RQKVKRQ+LD
Sbjct: 240 TFDVTVKEVSKPGELEINDETAKNLGLESLERLREIVRGQIENQFGSMTRQKVKRQLLDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+F+ P L++ E+N I +V ++ +A + + ++ +EE Y LA+RRV
Sbjct: 300 LDAAYSFEAPSKLIDAEFNNIWAQVTRDLEAAGRTFADEETTEEEARAEYLRLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP-GHEKKMLDHFQKYPNALAELRAPIFED 419
G+VL IGEK + V++EE+Q L++Q+ RFP +++ + ++ P AL LRAP+FE+
Sbjct: 360 GLVLAEIGEKAGVTVSDEELQRGLFEQVRRFPANQQQEAFEFYRSNPEALNALRAPMFEE 419
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
KV+DH+L + + D KV+ ++L + ++
Sbjct: 420 KVVDHLLGQISVTDVKVSKEELMADDEDAET 450
>gi|325274288|ref|ZP_08140399.1| trigger factor [Pseudomonas sp. TJI-51]
gi|324100571|gb|EGB98306.1| trigger factor [Pseudomonas sp. TJI-51]
Length = 437
Score = 266 bits (678), Expect = 7e-69, Method: Composition-based stats.
Identities = 95/454 (20%), Positives = 214/454 (47%), Gaps = 19/454 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ + N+R++ +A + GFRPGKVP+S I+ +
Sbjct: 1 MQVSVENTSALERRMTIAVPAERVENEVNKRLQQTAKRAKVAGFRPGKVPMSVIRQRFEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E ++++ E + ++ A PS+ E DL+ +++
Sbjct: 61 DARQEAFGDLVQASFYEAIVEQKLNPAGAPSVEPKS---------FEKGKDLEFVAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +S + + V + EV + ++D + + K N FE E ++ D+V +D+
Sbjct: 112 FPEFTVSGLESINVERLSAEVADADLDNMLEVLRKQNTRFEAVERAAQNDDQVNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD S K Q ++GS + + LVG K G+++ + FPED+ DLAGK
Sbjct: 172 VDGEAFAGGSAKGTQLVLGSGRMIPGFEDGLVGAKAGEERVVNVTFPEDYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +P+ +N + + G + + R + +++ ++ KVK Q++
Sbjct: 232 EFTITVNSVSAPVLPELNEEFFAQFGIKESTLEGFRAEVRKNMERELRQAIKTKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + P++L+ENE N + + + D+ + + AKRRV
Sbjct: 292 DGLLAANPIEAPKALLENEINRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ ++ + +++ + + + ++++ + K + E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFELKPDDAKVREMIEEMASAY-QEPEQVIAWYYKNDQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
++V+D +L+ + D+ V+++ + + +
Sbjct: 404 EQVVDTVLQKATVTDKSVSYEDAVKPAQAPAEAE 437
>gi|152984309|ref|YP_001348855.1| trigger factor [Pseudomonas aeruginosa PA7]
gi|166229919|sp|A6V720|TIG_PSEA7 RecName: Full=Trigger factor; Short=TF
gi|150959467|gb|ABR81492.1| trigger factor [Pseudomonas aeruginosa PA7]
Length = 436
Score = 266 bits (678), Expect = 7e-69, Method: Composition-based stats.
Identities = 99/452 (21%), Positives = 214/452 (47%), Gaps = 19/452 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + V +P+ R+ N+R++ +A I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVESTSALERRMTVGVPAERIETEVNKRLQQTARRAKIPGFRPGKVPMSVIRQRYEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S E + ++I+E E + ++ A PS+ E DL+ ++++
Sbjct: 61 SARQEAMGDLIQETFYEAVVEQKLNPAGSPSVEPKS---------FEKGKDLEYIATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +S + +++ + EV + ++D + + K N FEV E ++ D++ +D+
Sbjct: 112 FPEFTVSGLEGIKIERLQAEVADADVDNMLDVLRKQNTRFEVVERAAQNDDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S K ++GS + + E LVG K G+++ + FPED+ DLA K
Sbjct: 172 IDGEAFAGGSAKGTLLVLGSGRMIAGFEEGLVGAKAGEERVLNLTFPEDYQNLDLANKPA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNSVAEPKLPELNEEFFALFGVKETGLDGFRAEVQKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +VP++L+ NE N + + + D+ + + AKRRV
Sbjct: 292 EGLLQANPIEVPKALIGNEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + +++ ++ E ++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQHELKADEGRVREMIEEMASAY-QEPEQVVAWYFKNEPQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
++V+D +L+ + D++V++++ +
Sbjct: 404 EQVVDTVLQKATVTDKQVSYEEAVKPAEAPQA 435
>gi|238754234|ref|ZP_04615591.1| Trigger factor [Yersinia ruckeri ATCC 29473]
gi|238707481|gb|EEP99841.1| Trigger factor [Yersinia ruckeri ATCC 29473]
Length = 434
Score = 266 bits (678), Expect = 8e-69, Method: Composition-based stats.
Identities = 85/450 (18%), Positives = 207/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + I GFR G VP+S ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIEKAVKSELLKAAKNVRIDGFRKGHVPMSIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A PS G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPS---------YAPGEYKEGEDFTFSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV++ ++D + + K ++ + + D+VT+D+ S
Sbjct: 112 YPEVELKDLESIEVEKPVVEVNDADVDTMLETLRKQQATWKDTDGAATAEDRVTLDFNGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + E +VG K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKATDFVLAMGQNRMIPGFEEGVVGHKAGEEFTIDVNFPEDYHAENLKGKSA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + R G +R + +++ + VR +VK Q +
Sbjct: 232 QFAIVLKKVEQRELPELTEEFIKRFGVADGSIEGLRAEVRKNMERELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANEIDVPAALIDSEIDVLRRQAAQRFGG------NEKQAAELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ ++ E+ +++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVISQHELKADEDRVKALIEEMASAY-EDPQEVIEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + ++ +
Sbjct: 405 EQAVETLLAKAKVTEKPTTFSELMNQTTAA 434
>gi|320540335|ref|ZP_08039987.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Serratia
symbiotica str. Tucson]
gi|320029655|gb|EFW11682.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Serratia
symbiotica str. Tucson]
Length = 434
Score = 266 bits (678), Expect = 8e-69, Method: Composition-based stats.
Identities = 94/450 (20%), Positives = 211/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL L + +P+ ++ + + + + I GFR GKVP + ++ YG
Sbjct: 1 MQVSVETTQGLGCRLSITVPAESISQAVKKELINTAKSVLIDGFRKGKVPRNIVEQRYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + + E+++ + + K A RP+ G + D + +++
Sbjct: 61 SIRQDVLGEVMQRRFIDAIVKEKINPAGRPN---------YLPGEYKEGEDFSFAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +E+ + D ++V + + EV + ++D + + K ++ + +E+ D+VT+D+T S
Sbjct: 112 YPDVELKALDSIEVEKPLVEVTDADVDTMLETLRKQQATWKESDRATEVEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + ++G + E L G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKASDFVLVMGQGRMIPGFEEGLAGHKAGEEFTIDVNFPEDYHAENLQGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V ++ + R G +R + +++ + VR ++K Q++
Sbjct: 232 KFAIVLKKVEERELPELSEEFIKRFGVADGSVDGLRAEVRKNMERELKGAVRNRIKTQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP L++ E + + + + E + + AKRRV
Sbjct: 292 DGLVSTNDIDVPAVLIDGEVDVLRHQAAQRFGG------DEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + NN++ EE +++ + + + +++++ + K + + +R E
Sbjct: 346 AVGLLLGEVITANNLKADEERVKTLIEEMASAY-EDPREVVEFYSKNKDLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
D+ ++ +L Q+ ++ +TF +L + ++
Sbjct: 405 DQAVETLLAKAQVTEKAITFSELMNQPQQA 434
>gi|308185907|ref|YP_003930038.1| Trigger factor (TF) [Pantoea vagans C9-1]
gi|308056417|gb|ADO08589.1| Trigger factor (TF) [Pantoea vagans C9-1]
Length = 434
Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats.
Identities = 87/450 (19%), Positives = 205/450 (45%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + + D+ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRITITVAADSIESAVKKELVDVARKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGELMTRNFVDAIIKEKINPAGAPN---------YVPGEYKEGQDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + EV + ++D + + K + + + D+ T+D+ S
Sbjct: 112 YPEVELKGLENIEVEKPVVEVTDADVDTMLDTLRKQQANWIESDVAAGPEDRATIDFNGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+ I+ FP+D+ + L GK
Sbjct: 172 VDGEEFEGGKATDFVLAMGQGRMIPGFEEGVVGHKAGETFTIDVKFPDDYHAETLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + + R G E S +R + + + + +R ++K Q +
Sbjct: 232 KFEIVLKKVETRELPELTEEFIKRFGVEDGSVAGLRTEVRKNMDRELKGAIRNRIKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +LV++E + + ++ N E + + AKRRV
Sbjct: 292 DGLVEANEIDVPAALVDSEIDVLRRQAAQRFGG------NEQQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E + + + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEARVNTMIEEMASAY-EDPKEVIEFYSKNNELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ +++ F +L + ++++
Sbjct: 405 EQAVEAVLAKAKVTEKETNFQELMNQTAQA 434
>gi|292487466|ref|YP_003530338.1| Trigger factor (TF) [Erwinia amylovora CFBP1430]
gi|292898708|ref|YP_003538077.1| trigger factor [Erwinia amylovora ATCC 49946]
gi|291198556|emb|CBJ45664.1| trigger factor [Erwinia amylovora ATCC 49946]
gi|291552885|emb|CBA19930.1| Trigger factor (TF) [Erwinia amylovora CFBP1430]
Length = 434
Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats.
Identities = 89/450 (19%), Positives = 204/450 (45%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + + + ++ + + K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITVDKDVIENAVKNELVSVAKKVRIDGFRKGKVPMTVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P G + D +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPQ---------YVPGEYKIGEDFTFSAEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + EV E ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELQGLDAIEVEKPVVEVTEADVDTMLDTLRKQQATWKETDAAATAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+ I+ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGVVGHKAGETFTIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEERELPELTEEFIKRFGVEAGSLDGLRAEVRKNMQRELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +LV+ E + + ++ + E + + AKRRV
Sbjct: 292 DGLVKANDIDVPAALVDGEIDVLKRQAAQRFGG------DEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E+ +++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEDRVKALIEEMASAY-EDPSEVIEFYSKNTELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L+ ++ ++ F +L + ++ +
Sbjct: 405 EQAVEAVLEKAKVTEKATNFQELMNQTATA 434
>gi|312171570|emb|CBX79828.1| Trigger factor (TF) [Erwinia amylovora ATCC BAA-2158]
Length = 434
Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats.
Identities = 89/450 (19%), Positives = 204/450 (45%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + + + ++ + + K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITVDKDVIENAVKNELVSVAKKVRIDGFRKGKVPMTVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P G + D +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPQ---------YVPGEYKIGEDFTFSAEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + EV E ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELQGLDAIEVEKPVVEVTEADVDSMLDTLRKQQATWKETDAAATAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+ I+ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGVVGHKAGETFTIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEERELPELTEEFIKRFGVEAGSLDGLRAEVRKNMQRELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +LV+ E + + ++ + E + + AKRRV
Sbjct: 292 DGLVKANDIDVPAALVDGEIDVLKRQAAQRFGG------DEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E+ +++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEDRVKALIEEMASAY-EDPSEVIEFYSKNTELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L+ ++ ++ F +L + ++ +
Sbjct: 405 EQAVEAVLEKAKVTEKATNFQELMNQTATA 434
>gi|261822508|ref|YP_003260614.1| trigger factor [Pectobacterium wasabiae WPP163]
gi|261606521|gb|ACX89007.1| trigger factor [Pectobacterium wasabiae WPP163]
Length = 434
Score = 265 bits (677), Expect = 9e-69, Method: Composition-based stats.
Identities = 89/450 (19%), Positives = 207/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + + K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADIIESAVKSELVNAAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K P+ G D + +D+
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPVGAPN---------YIPGEYAVGGDFTYSVEFDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + EV + ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKGLDAIEVEKPVVEVTDADVDTMLDTLRKQQATWKETDRAAAAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +G + + +VG K G++ I FPED+ ++L GK
Sbjct: 172 IDGEVFEGGEASDFVLAMGQNRMIPGFEDGIVGHKAGEEFTINVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + R G + +R + +++ + VR +VK Q+L
Sbjct: 232 QFAIVLKKVEERELPELTEEFIKRFGVADGSQEGLRAEVRKNMERELKGAVRNRVKTQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N +VP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 DGLINANEIEVPVALIDGEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ E + + + + + +++++ + K L +R E
Sbjct: 346 VIGLLLGEVISSNELKADEARVNALIEEMASAY-EDPQEVIEFYSKNKELLNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++V++ V+F++L + ++ +
Sbjct: 405 EQAVETVLAKAKVVEKSVSFNELMNQTTTA 434
>gi|304395498|ref|ZP_07377381.1| trigger factor [Pantoea sp. aB]
gi|304356792|gb|EFM21156.1| trigger factor [Pantoea sp. aB]
Length = 434
Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats.
Identities = 87/450 (19%), Positives = 204/450 (45%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + + D+ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRITITVAADSIESAVKKELVDVARKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGELMTRNFVDAIIKEKINPAGAPN---------YVPGEYKEGQDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + I EV + ++D + + K + + + D+ T+D+ S
Sbjct: 112 YPEVELKGLENIEVEKPIVEVTDADVDTMLDTLRKQQANWIESDAAAGPEDRATIDFNGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+ I+ FP+D+ + L GK
Sbjct: 172 VDGEEFEGGKATDFVLAMGQGRMIPGFEEGVVGHKAGETFTIDVKFPDDYHAETLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + + R G E S +R + + + + +R ++K Q +
Sbjct: 232 KFEIVLKKVETRELPELTEEFIKRFGVEDGSVAGLRTEVRKNMDRELKGAIRNRIKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +LV++E + + ++ N E + + AKRRV
Sbjct: 292 DGLVEANEIDVPAALVDSEIDVLRRQAAQRFGG------NEQQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E + + + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEARVSTMIEEMASAY-EDPQEVIEFYSKNNELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ +++ F L + ++++
Sbjct: 405 EQAVEAVLAKAKVTEKETNFQDLMNQTAQA 434
>gi|294141769|ref|YP_003557747.1| trigger factor [Shewanella violacea DSS12]
gi|293328238|dbj|BAJ02969.1| trigger factor [Shewanella violacea DSS12]
Length = 434
Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 99/450 (22%), Positives = 214/450 (47%), Gaps = 19/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + NE ++ +A + GFRPGKVP+S I YGK
Sbjct: 1 MQVSVETTQGLERRLTISVPAEQIEKTVNEALKSEAKRARLPGFRPGKVPVSVINKRYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + E+++ E + A P+ E ++D + +++I
Sbjct: 61 AIRQDITGEVMQRNFVEAIVAEKLNPAGAPTFIPGESDTDS----------FQFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + D + V Q EV + ++D + + K + FE E + GDK +++ S
Sbjct: 111 YPEVALKGLDAIVVEQPTAEVTDTDVDAMIETLRKQHATFEAVERNAADGDKAMINFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E +N + +GS + + G K G++ +IE FPED+ ++L GK
Sbjct: 171 VDGEDFEGGKAENFELQLGSGRMIPGFESGVEGHKAGEEFDIEVTFPEDYHAENLKGKVA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ S+ + + + ++ VK Q+L
Sbjct: 231 KFVITLNEVQAANLPEVNDEFAKLFGVTEGGLEALKAEISKNMGRELDQALKASVKEQVL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + D+P+SL++ E N + ++ ++ E + A+RRV
Sbjct: 291 SGLLEQNEIDLPKSLIDGEVNVLRKQAMQRFGDQ------AANMPELPADLFTEQAERRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E + + + + +++ ++ + +R E
Sbjct: 345 KVGLLLGEVIKTNELKAEDERVNALIASMASAY-EDPSEVVAYYNANQEMMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +LK+ ++ ++ V F++ + +++
Sbjct: 404 EQAVEALLKTAKVTEKAVNFEEFMNKATQQ 433
>gi|146282417|ref|YP_001172570.1| trigger factor [Pseudomonas stutzeri A1501]
gi|166229922|sp|A4VL77|TIG_PSEU5 RecName: Full=Trigger factor; Short=TF
gi|145570622|gb|ABP79728.1| trigger factor [Pseudomonas stutzeri A1501]
Length = 436
Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 103/452 (22%), Positives = 218/452 (48%), Gaps = 19/452 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P R+ N+R++ S+A I GFRPGKVP+S I+ Y +
Sbjct: 1 MQVSVESTSALERRMTIGVPVERIETEVNKRLQQTASRAKIPGFRPGKVPMSVIRQRYEE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + ++I+ E + A PS+ + E DL+ ++++
Sbjct: 61 AARQEALGDLIQSTFYEAIVAEKLNPAGAPSVEPK---------VFEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ +++ + EV + ++D + + K N FE E +E GD+V +D+
Sbjct: 112 FPEFEVAGFEAIEIERLQAEVTDADVDNMLEILRKQNTRFESVERAAENGDQVNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S K Q ++GS + + LVG K G+++ I FPED+ DLAGK
Sbjct: 172 IDGEAFAGGSAKGTQLVLGSGRMIPGFEDALVGAKAGEERVITPTFPEDYQNLDLAGKTA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +P +N + + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNSVAAPQLPELNEEFFAQFGVQEGGVEGFRAEVKKNMERELRQAIKTKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +VP++LV+NE N + + + D+ + + AKRRV
Sbjct: 292 EGLVAGNPIEVPKALVDNEVNRLRVQAVQQFGGN-------IKPDQLPAELFQEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ ++ E ++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQKELKPDEARVRELIEEMASAY-QEPEQVVAWYYKNAEQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
++V+D +L+ ++ D+ V++++ +
Sbjct: 404 EQVVDTVLQQAKVTDKSVSYEEAVKPAEAPQA 435
>gi|242240294|ref|YP_002988475.1| trigger factor [Dickeya dadantii Ech703]
gi|242132351|gb|ACS86653.1| trigger factor [Dickeya dadantii Ech703]
Length = 434
Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 98/450 (21%), Positives = 211/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + + + D+ + + K I GFR GKVP ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAAASIEDAVKSELVSVAKKVRIDGFRKGKVPAKIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A PS G + D + +++
Sbjct: 61 SVRQDVLGDLMQRHFVDAIIKEKINPAGAPS---------YVPGEYQVGGDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + +V + ++D + + K ++V E + D+VT+D+T S
Sbjct: 112 YPEVELKGLESIEVEKPLVDVTDADVDGMLETLRKQQAEWKVAERAAAAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + +VG + G++ I+ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKSSDFVLAMGQGRMIPGFEDGIVGHQAGEEFTIDVKFPEDYHAENLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + D R G E +R + +++ + +R +VK Q++
Sbjct: 232 KFAIVLKKVEERELPELTPDFIKRFGVEDGSVEGLRAEVRKNMERELKGAIRNRVKSQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N DVP +L++ E N + Q+ N +E + + AKRRV
Sbjct: 292 DGLVNANEIDVPAALIDGEINVLRQQAARRFGG------NEKQANELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N +E E + + + + + ++++ ++Q+ L +R E
Sbjct: 346 VVGLLLGEVISTNELEADEARVNTLIDEIASAY-EDPQEVVSYYQQNKEMLNNIRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ I+ +L ++V++ V+F++L + S +
Sbjct: 405 EQAIETLLSKAKVVEKAVSFNELMNQSVPA 434
>gi|251790649|ref|YP_003005370.1| trigger factor [Dickeya zeae Ech1591]
gi|247539270|gb|ACT07891.1| trigger factor [Dickeya zeae Ech1591]
Length = 434
Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 92/450 (20%), Positives = 211/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + ++ + + K I GFR GKVP ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIENAVKSELVSVAKKVRIDGFRKGKVPAKIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRHFVDAIIKEKINPAGAPN---------YVPGEYQVGGDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + EV + ++D + + K ++ + + D+VT+D+T S
Sbjct: 112 YPEVELKGLDTIEVEKPLVEVSDADVDGMLDTLRKQQATWKETDRAAAAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V E + +G + + +VG K GD+ I+ FPED+ ++L G+
Sbjct: 172 VGGEEFEGGKASDFVLAMGQGRMIPGFEDGVVGHKAGDEFTIDVKFPEDYHAENLKGQDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + D R G E +R + +++ + +R +VK Q++
Sbjct: 232 KFAIVLKKVEERELPELTADFIKRFGVEDGSLDGLRAEVRKNMERELKGAIRNRVKSQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +L++NE + + ++ N E + + AKRRV
Sbjct: 292 DGLVKANEIDVPAALIDNEVDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + E N ++ E+ + + + + ++++++++K + +R E
Sbjct: 346 VVGLLLGEVIESNELKADEDRVNVLIDEIASAY-EDPREVVEYYKKSKEMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ I+ +L ++V++ V F++L + ++ +
Sbjct: 405 EQAIEALLSKAKVVEKAVGFNELMNQTTAA 434
>gi|310766841|gb|ADP11791.1| trigger factor [Erwinia sp. Ejp617]
Length = 434
Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 88/450 (19%), Positives = 204/450 (45%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + + + ++ + + K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITVDKDVIENAVKNELVSVAKKVRIDGFRKGKVPMAVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P G + D +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPQF---------VPGEYKIGEDFTFSAEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV E ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPVVEVTEADVDTMLDTLRKQQATWKETDAAATAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+ I+ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGVVGRKAGETFTIDVSFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEERELPELTEEFIKRFGVEAGSLDGLRAEVRKNMQRELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +LV+ E + + ++ + E + + AKRRV
Sbjct: 292 DGLVKANDIDVPAALVDGEIDVLKRQAAQRFGG------DEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E+ +++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEDRVKALIEEMASAY-EDPSEVIEFYSKNAELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L+ ++ ++ F +L + ++ +
Sbjct: 405 EQAVEAVLEKAKVTEKATKFQELMNQTATA 434
>gi|188534636|ref|YP_001908433.1| trigger factor [Erwinia tasmaniensis Et1/99]
gi|238691981|sp|B2VHT7|TIG_ERWT9 RecName: Full=Trigger factor; Short=TF
gi|188029678|emb|CAO97557.1| Trigger factor (TF) [Erwinia tasmaniensis Et1/99]
Length = 434
Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 88/450 (19%), Positives = 202/450 (44%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + + + ++ + + K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITVDKDVIENAVKSELVSVAKKVRIDGFRKGKVPMTVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P G + D +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGSPQ---------YVPGEYKIGEDFTFSAEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + EV E ++D + + K ++ + + D+ T+D++ S
Sbjct: 112 YPEVELQGLDAIEVEKPVVEVTEADVDTMLETLRKQQATWKETDAAATAEDRATIDFSGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+ I+ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGVVGHKAGETFTIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEERELPELTEEFIKRFGVEAGSLDGLRAEVRKNMQRELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +LV+ E + + ++ + E + + AKRRV
Sbjct: 292 DGLVKANDIDVPAALVDGEIDVLKRQAAQRFGG------DEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E + + + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADETRVNALIEEMASAY-EDPSEVIEFYSKNNELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L+ ++ ++ F +L + ++ +
Sbjct: 405 EQAVEAVLEKAKVTEKATNFQELMNQTATA 434
>gi|296446283|ref|ZP_06888229.1| trigger factor [Methylosinus trichosporium OB3b]
gi|296256184|gb|EFH03265.1| trigger factor [Methylosinus trichosporium OB3b]
Length = 457
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 135/452 (29%), Positives = 255/452 (56%), Gaps = 4/452 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + +EGLK E V++P L ++ ++RSKA IKGFRPGK P S++K +YGK
Sbjct: 1 MEVTQTLAEGLKHEFRVVLPVEELAAKLEAQLSELRSKAQIKGFRPGKAPSSYLKKIYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I+SE + E + E +I+ R A+ P + + ++ I +E D +++++
Sbjct: 61 GIMSEVLQEAVNEANRKIVEDHGLRVALEPKLDLPVDQTLIEKA-LEAEGDFAYSVAFEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETE---SEIGDKVTVDY 177
LP+ E+ FDD+ + + + EV ++++ + + ++A+ FE K E + GD+VT+D+
Sbjct: 120 LPKFEVGGFDDISIERPVAEVKDEDVAKSIDQLAERIREFEEKAGEGVTAAKGDRVTIDF 179
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T +D E + ++GS E L G G+Q+ ++ FP+D+S +LAG
Sbjct: 180 TGKLDGEAFEGGGGDAIDLVLGSGSFIPGFEEQLEGAGVGEQRVVKVKFPDDYSAPNLAG 239
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + ++K V +P + +++ A + FE+ +A++ ++ E R K+KR +
Sbjct: 240 KDAEFDVTVKAVAAPKELPIDDAFAAKYNFETLAALQAAVRANLEADYEKASRAKLKRSL 299
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + +++FD+PE LVE E+ I ++ E + + ++ + +E Y +A+RR
Sbjct: 300 LDALDKRFSFDLPEGLVEQEFTTIWGQLDAERQRSGKSFEDEGTTEEAARGEYRRIAERR 359
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL IG+ + V ++++ AL +++ FPG EK++ D ++ P ALA++RAP++
Sbjct: 360 VRLGLVLAEIGQGAGVTVEDKDVTDALVERVRMFPGREKEVWDFYRNNPQALAQIRAPLY 419
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
E++V+DH++ + + D+ VT ++L +
Sbjct: 420 EERVVDHLVTKIGVTDKPVTREELMAEDEDDE 451
>gi|296536162|ref|ZP_06898290.1| trigger factor [Roseomonas cervicalis ATCC 49957]
gi|296263533|gb|EFH10030.1| trigger factor [Roseomonas cervicalis ATCC 49957]
Length = 448
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 120/455 (26%), Positives = 235/455 (51%), Gaps = 16/455 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR V++P+ + + + R+ + + + GFRPGKVP++ +K Y
Sbjct: 3 MQVTELAAEGLKRAFTVVVPAAEIAAARDARLATLAKEVRLPGFRPGKVPMAVVKQRYAS 62
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L E ++E ++ + ++ +R R AM+P I + DL+ ++ +
Sbjct: 63 AVLGEVLEEQVQSVTKTVVDERGLRPAMQPKIELV---------NFSDGADLEFKIELEQ 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY--- 177
LP+I + F + + + + +V ++E+ + + IA N + E V
Sbjct: 114 LPEIPLPDFSAIALEKPVAKVGDEEVTKALEGIAARNRSLEDVTESRPAAQGDVVVTDFE 173
Query: 178 ----TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+ + ++ +G A E L G++ G+ +E++ FP ++
Sbjct: 174 GRLVEGDTVSEPFPGGTGTDMPVEIGGAGFIPGFAEGLEGIQVGETREVDVTFPAEYGAA 233
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
+LAGK R + K + P+ ++++ A +LG ++ ++ ++ + L R V
Sbjct: 234 ELAGKPARFKLTAKGLKKPVSPALDDEFAKKLGLAGLDELKQRVTETLQGEYDQLSRLNV 293
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
KR++LD +S + +F+VP S+VE E+ I Q+V ++ + N ++ ++ Y +
Sbjct: 294 KRKLLDALSEQASFEVPASMVEAEFAQIWQRVEADLKAGNLDEEDKGKDEDTLKADYKAI 353
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+RR+ G++L IG NNI+VT +E+ A+ + R+PG E+ +L+ FQK P A+ LR
Sbjct: 354 AERRIRLGLLLSEIGRSNNIQVTNDELTRAMRTEAQRYPGQERAVLEFFQKNPQAIENLR 413
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
APIFE+KV+D +L+ ++ +++V +L + +
Sbjct: 414 APIFEEKVVDFMLELAKVSEKEVPAGELSAEPAAA 448
>gi|290474664|ref|YP_003467544.1| peptidyl-prolyl cis/trans isomerase (trigger factor), molecular
chaperone involved in cell division [Xenorhabdus
bovienii SS-2004]
gi|289173977|emb|CBJ80764.1| peptidyl-prolyl cis/trans isomerase (trigger factor), molecular
chaperone involved in cell division [Xenorhabdus
bovienii SS-2004]
Length = 434
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 94/447 (21%), Positives = 212/447 (47%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + +P+ + + + + ++ K I GFR GKVP++ +K YG
Sbjct: 1 MQVSVETTQGLGRRVSITVPAADIEKAISSELVNVAKKVRIDGFRKGKVPMNIVKQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L + + ++++ + + A PS + + D + +++
Sbjct: 61 SVLQDVLGDLMQRNFVNAIIENKINPAGAPSYKPEQ---------FKDGEDFIYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ ++++V + + EV + ++D + + K ++ + + D+VTVD+T S
Sbjct: 112 YPEIELKGLEEIEVEKPVVEVKDADVDAMLETLRKQQADWKETDEAAAAEDRVTVDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G++ ++ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKSTDFVLAMGQGRMIPGFEEGVVGHKAGEEFTLDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K+V + + R G + +R + +++ + VR ++K QIL
Sbjct: 232 TFAINLKKVEQRELPELTEEFIKRFGIADGTVDGLRTEVRKNMERELKNAVRSRIKTQIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N +VP ++++ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVNANEIEVPAAVIDGEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++V E+ + + + + K++++++ K L +R E
Sbjct: 346 VVGLLLGEVISSNELKVDEDRVNVLIEEMASAY-EDPKEVIEYYSKNKEMLNNVRNIALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ ++ +L ++ +++V F+ L + +
Sbjct: 405 EQAVEFVLNKAKVSEKEVGFNDLMNQN 431
>gi|327189115|gb|EGE56300.1| chaperone trigger factor protein [Rhizobium etli CNPAF512]
Length = 495
Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats.
Identities = 178/446 (39%), Positives = 287/446 (64%), Gaps = 1/446 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKRE+ V+IP+ + D NER+ D++ K I GFRPGKVP +H+K +YGK
Sbjct: 1 MQVIETLAEGLKREIKVVIPAKDMEDKMNERLADVKDKIRINGFRPGKVPAAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI++E ++EI++E ILS R E++A +P I + E + D ++ D + LSY++
Sbjct: 61 SIMAELVNEIVREQPTAILSSRGEKSATQPEIAMTE-DKDEADKILSAQQDFEFTLSYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ S ++VT+++ ++ + E+ Q+ ++A++ ++E K ++ GD+VT+DY
Sbjct: 120 LPPIELKSVKGIKVTREVIDISDDEVTEQVLKVAESARSYESKTGKAANGDRVTMDYVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + + ++GS + LVG+K G++K I FP D+ K+LAGK+
Sbjct: 180 VDGEAFEGGTDQGAELVIGSGRFIPGFEDQLVGVKAGEEKTITVTFPADYPAKNLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K+V +P V +N++LA +LG ES ++ + +I+ L RQK+KRQILD
Sbjct: 240 TFDITVKDVAAPGAVEINDELASKLGIESADRLKEIVRGQIESQYGSLTRQKLKRQILDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P SLV+ EYNGI +V +++ + + ++ D+ +E+ + Y LA+RRV
Sbjct: 300 LDEMYKFETPASLVDAEYNGIWSQVNNDLAQSGKTFEDEDTTEEKAREEYKTLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTE+EMQ A+Y QL ++PG EK++L+ F+ P A A +RAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEDEMQRAIYDQLRQYPGQEKQILEFFRSQPGAAASIRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSS 446
VIDH+L + + D+KVT ++L
Sbjct: 420 VIDHLLTEIDVTDKKVTKEELLAEDE 445
>gi|148255925|ref|YP_001240510.1| trigger factor [Bradyrhizobium sp. BTAi1]
gi|166229018|sp|A5EKB0|TIG_BRASB RecName: Full=Trigger factor; Short=TF
gi|146408098|gb|ABQ36604.1| Trigger factor (TF), molecular chaperone involved in cell division
[Bradyrhizobium sp. BTAi1]
Length = 452
Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats.
Identities = 142/448 (31%), Positives = 258/448 (57%), Gaps = 3/448 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E SEGLK E V +P+ L + ++ D++ K I GFRPGKVP++H+K +YGK
Sbjct: 1 MQVTETLSEGLKHEFQVSVPAADLDAKADAKLVDLKDKVRINGFRPGKVPVAHLKKIYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++ETID+ I++ +I ++R R A P +T+ E+++ + G DL ++ ++
Sbjct: 61 SVMAETIDQTIRDTNTQIFTERGFRLATEPKVTMPTEEAEVEKI-LSGQSDLTYTVAVEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYT 178
+P I ++ F V + + ++ + ++D + +A N ++ K ++ D+V V++
Sbjct: 120 VPAITLADFKTFSVEKPVADITDADVDEAIKRLADANRSYAAKAEGAKAESGDRVKVNFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D V + + + + ++GS + L+G+ G+ + ++ FP+++ DLAGK
Sbjct: 180 GTIDGVAFDGGTGEGIDVVIGSNTFIPGFEDQLIGIGVGETRTLKVAFPKNYLNNDLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +P VV+++ A LG ES ++ L ++ RQ+VKR +L
Sbjct: 240 DAEFETTATAIETPEEKVVDDEFAKTLGLESLDKLKQLMRDRLAGEFNQATRQRVKRALL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD P SL++ E+N + V+ EM S+ + + ++ +E+ + Y +A RRV
Sbjct: 300 DRLDETHKFDAPPSLIDEEFNLMWNSVKAEMDSSGKTFADENTTEEKAKEEYRTIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IGEKN I VT++E+ A+ ++ PG EK++ D ++ P ALA+LRAPI+E
Sbjct: 360 RLGLVLSEIGEKNKITVTDDEVSRAVIERARSMPGREKEVWDFYRSNPQALAQLRAPIYE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
DKV+D IL+ + ++KV+ D+LF +
Sbjct: 420 DKVVDFILELANVTEKKVSKDELFKDDE 447
>gi|322834047|ref|YP_004214074.1| trigger factor [Rahnella sp. Y9602]
gi|321169248|gb|ADW74947.1| trigger factor [Rahnella sp. Y9602]
Length = 434
Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats.
Identities = 87/450 (19%), Positives = 211/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + +P+ + + + + ++ K I GFR GKVP I+ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVPAESIEKAVSSELINVSKKVRIDGFRKGKVPSHIIEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPN---------YIPGEYKQGEDFNFSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + EV++ ++D + + K ++ + + D+VTVD++ S
Sbjct: 112 YPEVELKDLENIEVEKPVVEVNDADVDTMLETLRKQQADWKETDAAATAEDRVTVDFSGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + + LVG K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKASDFVLAMGQGRMIPGFEDGLVGHKAGEEFTIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G +R + +++ + VR ++K Q +
Sbjct: 232 KFAITLKKVEERELPELTPEFIKRFGVADGSVEGLRAEVRKNMERELKGAVRNRIKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANEIDVPSALIDGEVDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ ++ E+ +++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVISQHELKADEDRVKALIEEMASAY-EDPQEVVEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + + +
Sbjct: 405 EQAVETLLSKAKVTEKATTFTELMNQTQPA 434
>gi|260596808|ref|YP_003209379.1| trigger factor [Cronobacter turicensis z3032]
gi|260215985|emb|CBA28636.1| Trigger factor [Cronobacter turicensis z3032]
Length = 432
Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats.
Identities = 87/448 (19%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + ++ + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIENAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRHFVDAIIKEKINPAGAPN---------YVPGEYKLGEDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEVELQGLESIEVEKPVVEVTDADVDTMLDTLRKQQATWKDKDGAADAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLAMGQGRMIPGFEEGVKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + + + + VR ++K Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMDRELKGAVRNRIKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + N DVP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 EGLVNANNIDVPAALIDGEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E+ +++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEDRVKALIEEMASAY-EDPSEVIEFYSKNNELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKPTSFNELMNQQA 432
>gi|190891531|ref|YP_001978073.1| chaperone trigger factor protein [Rhizobium etli CIAT 652]
gi|238692534|sp|B3PXV9|TIG_RHIE6 RecName: Full=Trigger factor; Short=TF
gi|190696810|gb|ACE90895.1| chaperone trigger factor protein [Rhizobium etli CIAT 652]
Length = 495
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 177/446 (39%), Positives = 286/446 (64%), Gaps = 1/446 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKRE+ V+IP+ + D NER+ D++ K I GFRPGKVP +H+K +YGK
Sbjct: 1 MQVIETLAEGLKREIKVVIPAKDMEDKMNERLADVKDKIRINGFRPGKVPAAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI++E ++EI++E ILS R E++A +P I + E + D ++ D + LSY++
Sbjct: 61 SIMAELVNEIVREQPTAILSSRGEKSATQPEIAMTE-DKDEADKILSAQQDFEFTLSYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ S ++VT+++ ++ + E+ Q+ ++A++ ++E K ++ GD+V +DY
Sbjct: 120 LPPIELKSVKGIKVTREVIDISDDEVTEQVLKVAESARSYESKTGKAANGDRVAMDYVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + + ++GS + LVG+K G++K I FP D+ K+LAGK+
Sbjct: 180 VDGEAFEGGTDQGAELVIGSGRFIPGFEDQLVGVKAGEEKTITVTFPADYPAKNLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K+V +P V +N++LA +LG ES ++ + +I+ L RQK+KRQILD
Sbjct: 240 TFDITVKDVAAPGAVEINDELASKLGIESADRLKEIVRGQIESQYGSLTRQKLKRQILDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P SLV+ EYNGI +V +++ + + ++ D+ +E+ + Y LA+RRV
Sbjct: 300 LDEMYKFETPASLVDAEYNGIWSQVNNDLAQSGKTFEDEDTTEEKAREEYKTLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTE+EMQ A+Y QL ++PG EK++L+ F+ P A A +RAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEDEMQRAIYDQLRQYPGQEKQILEFFRSQPGAAASIRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSS 446
VIDH+L + + D+KVT ++L
Sbjct: 420 VIDHLLTEIDVTDKKVTKEELLAEDE 445
>gi|238759263|ref|ZP_04620430.1| Trigger factor [Yersinia aldovae ATCC 35236]
gi|238702550|gb|EEP95100.1| Trigger factor [Yersinia aldovae ATCC 35236]
Length = 434
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 84/450 (18%), Positives = 207/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + I GFR G VP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIEKAVKSELVKAAKNVRIDGFRKGHVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGSLMQRNFVDAIIKEKINPAGAPN---------YVPGEYKEGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV++ ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKDLESIEVEKPVVEVNDADVDTMLETLRKQQATWKEADAVATAEDRATLDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + E ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKATDFVLAMGQGRMIPGFEEGVIGHKAGEEFTIDVNFPEDYHAENLKGKSA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEVRELPELTEEFIKRFGVADGSVAGLRAEVRKNMERELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L+E E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANEIDVPAALIEGEIDVLRRQAAQRFGG------NEKQAAELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ ++ E+ +++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVISQHELKADEDRVKALIEEMASAY-EDPQEVIEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + ++ +
Sbjct: 405 EQAVETLLSKAKVTEKPTTFSELMNQTTAA 434
>gi|85058648|ref|YP_454350.1| trigger factor [Sodalis glossinidius str. 'morsitans']
gi|119370937|sp|Q2NV80|TIG_SODGM RecName: Full=Trigger factor; Short=TF
gi|84779168|dbj|BAE73945.1| trigger factor [Sodalis glossinidius str. 'morsitans']
Length = 434
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 87/450 (19%), Positives = 204/450 (45%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL R +++ + ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTEGLGRRVNITVAADTIEQAVKSELVNVAKKVCIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + + P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIQEKINPVGAPN---------YVPGEYKTGEDFSYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + EV + ++D + + K ++ + D+VTVD+T +
Sbjct: 112 YPEVELMGLDTIEVEKPRVEVKDADVDTMLDTLQKQQADWKETTDAAGAEDRVTVDFTGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + + +G + E ++G K G+ +I FPED+ ++L GK
Sbjct: 172 IDGEAFDGGKATDFVLAMGQGRMIPGFEEGVIGHKAGESFDISVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V ++ R G +R + +++ + VR +VK Q++
Sbjct: 232 KFAVELKKVEQRELPELDEAFIKRFGVADVSLEGLRAEVRKNMERELKNAVRNRVKTQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N VP +LV+ E + + ++ N E + + AKRRV
Sbjct: 292 DGLLNANDIHVPAALVDGEIDVLKRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + K+ ++ E + + + + + K++++ + K + +R E
Sbjct: 346 KVGLLLGEVIRKHELKADEARVSALIEEMASAY-EDPKEVIEFYGKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L + ++ +++ F++L + S +
Sbjct: 405 EQAVEALLANSRVTEKETGFNELMNQPSAA 434
>gi|121602650|ref|YP_988866.1| trigger factor [Bartonella bacilliformis KC583]
gi|166229016|sp|A1USB3|TIG_BARBK RecName: Full=Trigger factor; Short=TF
gi|120614827|gb|ABM45428.1| trigger factor [Bartonella bacilliformis KC583]
Length = 474
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 179/472 (37%), Positives = 296/472 (62%), Gaps = 7/472 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P L NER++D + K + GFRPGKVP S+++ +YGK
Sbjct: 1 MQVTETLNEGLKREIQVMVPMKDLEAKLNERLDDTKGKIKLNGFRPGKVPSSYLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EII + IL R+ER+A++P I INE +++G D L Y++
Sbjct: 61 SFMAEVLNEIINDAPRSILVDRNERSAVQPQIDINE-----DQKVLDGEADFIFNLKYEV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+ EI F D+++T++I +V E+EID ++ +I + ++ + SE GD+VT+DY
Sbjct: 116 LPEFEIKDFKDIEITREIADVSEQEIDEEVKKILSSTRSYSEGDAPSEEGDRVTIDYLGK 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D+V + + +VQ ++GS E LVG+K GD K I FP+++ + LAGK
Sbjct: 176 IDDVPFDGGTGHDVQLVLGSNQFIPGFEEQLVGVKAGDTKAISVKFPDNYGVAHLAGKDA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
N ++K V P + ++++ A +LG ES +R + +I+ + RQK+KRQILD
Sbjct: 236 VFNITVKTVSKPDELKIDDEAAKKLGLESLDRLREVVQGQIENQYGLMTRQKIKRQILDS 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F++PE LVE E+N I +V ++ + + ++ ++ +E+ + YHMLA+RRV
Sbjct: 296 LDADYNFEIPERLVEIEFNNIWAQVNSDLQKSGRSFEDENTTEEKAREEYHMLAQRRVRL 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IG K NI+V+E E+Q+A+++Q+ ++PG EK++++ F++ P A+A LRAPIFE+K
Sbjct: 356 GLVLSEIGMKANIQVSESELQTAIFEQVRQYPGQEKEIMNFFRRTPEAIANLRAPIFEEK 415
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEI 472
VID++L ++I D+KVT ++L ES + + K +T + +EI
Sbjct: 416 VIDYLLTHIKIKDKKVTVEELMKEFDES--DAIEKSLVKKKTASDNKKSNEI 465
>gi|269138346|ref|YP_003295046.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Edwardsiella tarda EIB202]
gi|267984006|gb|ACY83835.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Edwardsiella tarda EIB202]
gi|304558378|gb|ADM41042.1| Cell division trigger factor [Edwardsiella tarda FL6-60]
Length = 433
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 88/447 (19%), Positives = 203/447 (45%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL R +++ + ++ + + + ++ KA I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTEGLGRRVNITVTADSIEKAVESELRNVAKKARIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K P G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKLNPVGAPK---------YVPGEYKLGDDFAYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ D + V + +V++ ++D + + K ++ KE E D+ T+D+ S
Sbjct: 112 YPEIELKGLDTIVVEKPQVDVNDADVDAMIETLRKQQASWVAKEGEVGAEDRATIDFAGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + + ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEAFEGGKATDFVLAMGQGRMIPGFEDGILGHKAGEEFVIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G ++ + + + + VR ++K Q+L
Sbjct: 232 KFDIVLKKVEERELPEMTAEFIKRFGVADGSLDGLKAEVRKNMTRELKNAVRNRIKAQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +LV+ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVQANEIDVPAALVDGEIDVLRRQAAQRFGG------NEQQAMELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + KN ++ + + + + + + +++++ + K + +R E
Sbjct: 346 IVGLLLGEVISKNELKADDARVNALIEEMASAY-EDPQEVVEFYSKNKELMNNMRNMALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ ++ +L ++ ++ TF++L +
Sbjct: 405 EQAVEALLSQAKVSEKATTFNELMNQP 431
>gi|15965299|ref|NP_385652.1| trigger factor [Sinorhizobium meliloti 1021]
gi|307307889|ref|ZP_07587614.1| trigger factor [Sinorhizobium meliloti BL225C]
gi|21264076|sp|Q92Q12|TIG_RHIME RecName: Full=Trigger factor; Short=TF
gi|15074479|emb|CAC46125.1| Probable trigger factor [Sinorhizobium meliloti 1021]
gi|306901505|gb|EFN32108.1| trigger factor [Sinorhizobium meliloti BL225C]
Length = 491
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 168/450 (37%), Positives = 287/450 (63%), Gaps = 1/450 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE ++GLKREL V+IP++ + NER+ +++ + I GFRPGKVP++H+K +YGK
Sbjct: 1 MQVIETLAQGLKRELKVVIPADEMQARMNERLVEVKDRVRINGFRPGKVPVAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+++ ++EI++E EIL+ R E++A +P I + E E++ ++ D + ++Y+I
Sbjct: 61 SIMADLVNEIVREKPTEILTSRGEKSATQPEIAMTEDEAE-ADKILNAQADFEFTVAYEI 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P IE+ ++VT+++ +V E E++ Q+ IA++ +E K+ ++ GD+VTVDY
Sbjct: 120 IPPIELKDASGIKVTREVVDVSEDEVNEQIQRIAESARTYESKKGKAANGDRVTVDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + ++ + ++GS E LVG+K GD+K I FP D+ +LAGK+
Sbjct: 180 VDGEAFDGGKDEDAELVLGSNRFIPGFEEQLVGVKAGDEKTITVTFPADYPAANLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K+V + P+ +N++LA +LG ES ++ + +I+ + RQKVKRQ+LD
Sbjct: 240 TFDITVKDVAAAAPIEINDELATKLGLESVDKLKEIVRGQIESQFGSITRQKVKRQLLDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y FD PE LV+ E+ I +++ ++ A + + D+ +EE Y LA+RRV
Sbjct: 300 LDELYQFDTPERLVDAEFENIWRQINTDLQQAGKTFADEDTTEEEARAEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK ++V+++EMQ +L++QL +FPG EK++L++F+ P A A LRAP+FE+K
Sbjct: 360 GLVLSEIGEKAGVQVSDDEMQRSLFEQLRQFPGQEKEILEYFRNTPGAAASLRAPLFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
V+DH+L V + D+KV+ ++L +
Sbjct: 420 VVDHLLTEVSVTDKKVSKEELTADDEGDEK 449
>gi|84517321|ref|ZP_01004675.1| trigger factor [Loktanella vestfoldensis SKA53]
gi|84508801|gb|EAQ05264.1| trigger factor [Loktanella vestfoldensis SKA53]
Length = 443
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 120/453 (26%), Positives = 234/453 (51%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E ++GLKR + + + L E++++ + +KGFR GKVP++ ++ YG+
Sbjct: 1 MQVTETLNDGLKRGYAITVTAAELDAKVEEKLKEAQPTIEMKGFRKGKVPMALLRKQYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + + I V + L +R A +P + + ++ + D+ + +SY+
Sbjct: 61 RLMGEAMQDSIDSAVRDHLDSSGDRPAGQPEMKM-------SNPDWKPGDDVLVDVSYEK 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIA--KNNVAFEVKETESEIGDKVTVDYT 178
LP I F + + + + + D+ + + +A + +E K+T+++ D+V +D+
Sbjct: 114 LPDIPAVDFAKITLERMVVKADDAAVQEALDNLAASPQAMTYETKKTQAKKDDQVVLDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + ++ ++GS + L+ +KTGD K++E FPE++ LAGK
Sbjct: 174 GKVDGEAFEGGTAEDYPLVLGSNSFIPGFEDGLLKVKTGDVKDVEVTFPEEYQAAHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+IK+V +P +N++LA + G E + ++ + +++ R KR +L
Sbjct: 234 TAVFTCTIKDVRAPKAPEINDELAAKFGAEDLATLKTQIADRLEAEYSGASRALAKRALL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +F++P++LVE E N I ++ E N D + + LA+RRV
Sbjct: 294 DALDGVVSFELPKALVEAEANQIAHQLWHE---ENPDVHGHDHPEITPTDEHQSLAQRRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG+K +++VT++EM A+ Q ++PG E++ + Q+ +L+AP+FE
Sbjct: 351 KLGLLLADIGQKADVKVTDQEMTQAIMNQARQYPGQERQFFEFVQQNAQFRQQLQAPMFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+DHI + + ++ V+ + L + E
Sbjct: 411 DKVVDHIFAAATVTEKDVSKEDLQKAVEKLEEE 443
>gi|220934114|ref|YP_002513013.1| trigger factor [Thioalkalivibrio sp. HL-EbGR7]
gi|254789030|sp|B8GNT7|TIG_THISH RecName: Full=Trigger factor; Short=TF
gi|219995424|gb|ACL72026.1| trigger factor [Thioalkalivibrio sp. HL-EbGR7]
Length = 436
Score = 264 bits (673), Expect = 2e-68, Method: Composition-based stats.
Identities = 104/453 (22%), Positives = 212/453 (46%), Gaps = 19/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + L+R + V +PS R+ + R++ + + I GFRPGKVPL ++ YG
Sbjct: 1 MQVSVETVSNLQRRMTVQVPSERIEQEVDRRLKSLARRVKIDGFRPGKVPLKVVQQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E+++ E L + A PSI +E L+ ++D+
Sbjct: 61 GVFQEVVGEVLQSSYQEALLQEKLEPAGSPSIEPK---------PLEPGKGLEYTATFDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++EI+ D+ V + EV + ++D+ + + + F + ++ GD+V VD+ S
Sbjct: 112 FPKVEIADLSDVAVERPRVEVSDADVDKVIETLRRQRKEFVAVDRAAQKGDQVIVDFDGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + +G + + + L G+K GD+K I+ FPED+ ++L GK
Sbjct: 172 LDGEAFEGGKGEAMPVELGEGRMLAAFEDQLNGMKPGDEKTIDVPFPEDYPAENLKGKTA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++EV P V+ A G E +R +++ ++ KVK Q++
Sbjct: 232 QFAIKVREVKEPTLPEVDEAFAKSFGIEEGGVEKLREDVRANMEREVAQALKAKVKDQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++PE+LV++E + Q+ + + + A RRV
Sbjct: 292 QALFKAHPLELPEALVKDEIERLRQQALSRFGGQ-------VKPENFPDEVFREEAVRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++V +++ L + ++++D+++ A + L A + E
Sbjct: 345 SLGLIIRELVASKGMKVDAGRVKAELEAMAAGY-EDPRQVIDYYRNNRQAQSGLEAMVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
D+V+D +++ + D+ ++FD+L + E + E
Sbjct: 404 DQVVDFVVEQGKATDKPMSFDELMNPRKEGASE 436
>gi|307317064|ref|ZP_07596505.1| trigger factor [Sinorhizobium meliloti AK83]
gi|306897152|gb|EFN27897.1| trigger factor [Sinorhizobium meliloti AK83]
Length = 491
Score = 264 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 168/450 (37%), Positives = 287/450 (63%), Gaps = 1/450 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE ++GLKREL V+IP++ + NER+ +++ + I GFRPGKVP++H+K +YGK
Sbjct: 1 MQVIETLAQGLKRELKVVIPADEMEARMNERLVEVKDRVRINGFRPGKVPVAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+++ ++EI++E EIL+ R E++A +P I + E E++ ++ D + ++Y+I
Sbjct: 61 SIMADLVNEIVREKPTEILTSRGEKSATQPEIAMTEDEAE-ADKILNAQADFEFTVAYEI 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P IE+ ++VT+++ +V E E++ Q+ IA++ +E K+ ++ GD+VTVDY
Sbjct: 120 IPPIELKDASGIKVTREVVDVSEDEVNEQIQRIAESARTYESKKGKAANGDRVTVDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + ++ + ++GS E LVG+K GD+K I FP D+ +LAGK+
Sbjct: 180 VDGEAFDGGKDEDAELVLGSNRFIPGFEEQLVGVKAGDEKTITVTFPADYPAANLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K+V + P+ +N++LA +LG ES ++ + +I+ + RQKVKRQ+LD
Sbjct: 240 TFDITVKDVAAAAPIEINDELATKLGLESVDKLKEIVRGQIESQFGSITRQKVKRQLLDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y FD PE LV+ E+ I +++ ++ A + + D+ +EE Y LA+RRV
Sbjct: 300 LDELYQFDTPERLVDAEFENIWRQINTDLQQAGKTFADEDTTEEEARAEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK ++V+++EMQ +L++QL +FPG EK++L++F+ P A A LRAP+FE+K
Sbjct: 360 GLVLSEIGEKAGVQVSDDEMQRSLFEQLRQFPGQEKEILEYFRNTPGAAASLRAPLFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
V+DH+L V + D+KV+ ++L +
Sbjct: 420 VVDHLLTEVSVTDKKVSKEELTADDEGDEK 449
>gi|238919010|ref|YP_002932524.1| trigger factor [Edwardsiella ictaluri 93-146]
gi|259533603|sp|C5BCJ5|TIG_EDWI9 RecName: Full=Trigger factor; Short=TF
gi|238868578|gb|ACR68289.1| trigger factor, putative [Edwardsiella ictaluri 93-146]
Length = 433
Score = 264 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 90/447 (20%), Positives = 205/447 (45%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL R +++ + ++ + + + ++ KA I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTEGLGRRVNITVTADSIEKAVESELRNVAKKARIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K P G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKLNPVGAPK---------YVPGEYKLGEDFAYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ D + V + +V++ ++D + + K ++ VKE E D+ T+D+T S
Sbjct: 112 YPEIELKGLDTIVVEKPQVDVNDADVDAMIETLRKQQASWSVKEGEVGAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + + ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEAFEGGKATDFVLAMGQGRMIPGFEDGILGHKAGEEFVIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G ++ + + + + VR ++K Q+L
Sbjct: 232 KFDIVLKKVEERELPEMTAEFIKRFGVADGSLDGLKAEVRKNMTRELKNAVRNRIKAQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +LV+ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVLANEIDVPAALVDGEIDVLRRQAAQRFGG------NEQQAMELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + K+ ++ + + + + + + +++++ + K + +R E
Sbjct: 346 IVGLLLGEVISKSELKADDARVNALIEEMASAY-EDPQEVIEFYSKNKELMNNMRNMALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ ++ +L Q+ ++ TF++L +
Sbjct: 405 EQAVEALLSQAQVSEKATTFNELMNQP 431
>gi|238783610|ref|ZP_04627631.1| Trigger factor [Yersinia bercovieri ATCC 43970]
gi|238715488|gb|EEQ07479.1| Trigger factor [Yersinia bercovieri ATCC 43970]
Length = 434
Score = 264 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 85/450 (18%), Positives = 207/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + I GFR G VP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIEKAVKSELVKAAKSVRIDGFRKGHVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPN---------YVPGEYKQGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV++ ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKDLESIEVEKPVVEVNDADVDTMLETLRKQQATWKETDAAATAEDRATLDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + E ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKASDFVLAMGQGRMIPGFEEGVIGHKAGEEFTIDVNFPEDYHAENLKGKSA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEVRELPELTEEFIKRFGVADGSVAGLRAEVRKNMERELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +LVE E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANEIDVPAALVEGEIDVLRRQAAQRFGG------NEKQAAELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ ++ E ++ + + + +++++ + K + +R+ E
Sbjct: 346 VVGLLLGEVISQHELKADESRVKELIEEMASAY-EDPQEVIEFYSKNKELMNNMRSVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + ++ +
Sbjct: 405 EQAVETLLAKAKVTEKPTTFSELMNQTTTA 434
>gi|15596997|ref|NP_250491.1| trigger factor [Pseudomonas aeruginosa PAO1]
gi|116049750|ref|YP_791443.1| trigger factor [Pseudomonas aeruginosa UCBPP-PA14]
gi|218892246|ref|YP_002441113.1| trigger factor [Pseudomonas aeruginosa LESB58]
gi|254234894|ref|ZP_04928217.1| trigger factor [Pseudomonas aeruginosa C3719]
gi|254240193|ref|ZP_04933515.1| trigger factor [Pseudomonas aeruginosa 2192]
gi|296389809|ref|ZP_06879284.1| trigger factor [Pseudomonas aeruginosa PAb1]
gi|313110497|ref|ZP_07796382.1| trigger factor [Pseudomonas aeruginosa 39016]
gi|21264083|sp|Q9I2U2|TIG_PSEAE RecName: Full=Trigger factor; Short=TF
gi|122258861|sp|Q02KU3|TIG_PSEAB RecName: Full=Trigger factor; Short=TF
gi|226695529|sp|B7VB77|TIG_PSEA8 RecName: Full=Trigger factor; Short=TF
gi|9947783|gb|AAG05189.1|AE004606_3 trigger factor [Pseudomonas aeruginosa PAO1]
gi|115584971|gb|ABJ10986.1| trigger factor [Pseudomonas aeruginosa UCBPP-PA14]
gi|126166825|gb|EAZ52336.1| trigger factor [Pseudomonas aeruginosa C3719]
gi|126193571|gb|EAZ57634.1| trigger factor [Pseudomonas aeruginosa 2192]
gi|218772472|emb|CAW28254.1| trigger factor [Pseudomonas aeruginosa LESB58]
gi|310882884|gb|EFQ41478.1| trigger factor [Pseudomonas aeruginosa 39016]
Length = 436
Score = 264 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 101/452 (22%), Positives = 215/452 (47%), Gaps = 19/452 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + V +P+ R+ N+R++ +A I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVESTSALERRMTVGVPAERIETEVNKRLQQTARRAKIPGFRPGKVPMSVIRQRYEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S E + ++I+E E + ++ A PS+ E DL+ ++++
Sbjct: 61 SARQEAMGDLIQETFYEAVVEQKLNPAGSPSVEPKS---------FEKGKDLEYIATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +S +D++V + EV + ++D + + K N FEV E ++ D++ +D+
Sbjct: 112 FPEFTVSGLEDIKVERLQAEVSDADVDNMLDVLRKQNTRFEVVERAAQNDDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S K ++GS + + E LVG K G+++ + FPED+ DLA K
Sbjct: 172 IDGEAFAGGSAKGTLLVLGSGRMIAGFEEGLVGAKAGEERVLNLTFPEDYQNLDLANKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P +N + G + R + +++ ++ KVK Q++
Sbjct: 232 EFTVTVNSVAEPKLPELNEEFFALFGVKETGLDGFRAEVQKNMERELRQAIKSKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +VP++L+ NE N + + + D+ + + AKRRV
Sbjct: 292 EGLLQANPIEVPKALIGNEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + +++ ++ E ++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQHELKADEGRVREMIEEMASAY-QEPEQVVAWYFKNEPQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
++V+D +L+ + D++V++++ +
Sbjct: 404 EQVVDTVLQKATVTDKQVSYEEAVKPAEAPQA 435
>gi|332288866|ref|YP_004419718.1| hypothetical protein UMN179_00791 [Gallibacterium anatis UMN179]
gi|330431762|gb|AEC16821.1| conserved hypothetical protein [Gallibacterium anatis UMN179]
Length = 433
Score = 264 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 91/445 (20%), Positives = 213/445 (47%), Gaps = 18/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ + ++GL+R + + +P++ + + E ++ + A I GFR GKVP S I+ +G
Sbjct: 1 MQISVETTQGLERRISITVPADVIEQAVREELKRVAKTARIDGFRKGKVPPSIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S + + ++++ + + + A RP+ T + DL ++++
Sbjct: 61 SARQDVLGDVMQRHFFDAVMQEKINLASRPTFTPEKYTV---------GKDLTFSATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++EI ++++V + + +++E +ID+ + + K +E + +VT+D+ S
Sbjct: 112 YPEVEIKGLENIKVEKPVVKINEADIDKMVDTLRKQQATWEETTEAATADSRVTLDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + + +VG K G+Q +I+ FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKANDFILFMGQGRMIPGFEDGIVGHKAGEQFDIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + ++ + ++ + +R + +++ + V +K+Q+L
Sbjct: 232 KFAITLKKVEKMVLPELTDEFVAKFGPNTKTVADLRAEIEKNMQRELDNAVTANIKQQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP + V+ E N + Q+ N E + + AKRRV
Sbjct: 292 DGLLEQNNIDVPNAAVDEEINVLRQQAAQRFGG------NAKQALELPREIFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + N+++V E+ ++S + + +++++++ +R + E
Sbjct: 346 KVGLLLSKVISGNDLKVDEDRVKSMIASIASAY-EQPEEVINYYSSNKELSNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
D+ +D IL Q+ + + +FD + +
Sbjct: 405 DQAVDAILAKAQVSEVEKSFDDIMN 429
>gi|313499615|gb|ADR60981.1| Tig [Pseudomonas putida BIRD-1]
Length = 437
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 94/454 (20%), Positives = 216/454 (47%), Gaps = 19/454 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ + N+R++ +A I GFRPGKVP++ I+ +
Sbjct: 1 MQVSVENTSALERRMTIAVPAERVENEVNKRLQQTAKRAKIAGFRPGKVPMTVIRQRFEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E ++++ E + ++ A P++ E DL+ +++
Sbjct: 61 DARQEAFGDLVQASFYEAIVEQKLNPAGAPAVEPKS---------FEKGKDLEFVAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ + ++V + EV + ++D + + K N FE E ++ D+V +D+
Sbjct: 112 FPEFTVAGLESIKVERLSAEVADSDLDNMLEVLRKQNTRFEAVERAAQNDDQVNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD S K ++GS + E LVG K G+++ + FPED+ DLAGK
Sbjct: 172 VDGEAFAGGSAKGTLLVLGSGRMIPGFEEGLVGAKAGEERVVNVTFPEDYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +P+ +N + + G + + R + +++ ++ KVK Q++
Sbjct: 232 EFTITVNSVSAPVLPELNEEFFAQFGIKESTLEGFRAEVRKNMERELRQAIKTKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + ++ ++ + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPEQLPVELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ ++ + +++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFELKPDDAKVREMIEEMASAY-QEPEQVIAWYYKNDQQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
++V+D +L+ + D+ V++++ + +
Sbjct: 404 EQVVDTVLQKATVTDKSVSYEEAVKPVEAPAAAE 437
>gi|86357469|ref|YP_469361.1| trigger factor [Rhizobium etli CFN 42]
gi|119370925|sp|Q2K952|TIG_RHIEC RecName: Full=Trigger factor; Short=TF
gi|86281571|gb|ABC90634.1| trigger factor protein [Rhizobium etli CFN 42]
Length = 494
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 177/446 (39%), Positives = 289/446 (64%), Gaps = 1/446 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKRE+ V+IP+ + D NER+ D++ K I GFRPGKVP +H+K +YGK
Sbjct: 1 MQVIETLAEGLKREIKVVIPAKDMEDKMNERLADVKDKIRINGFRPGKVPAAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+++ ++EI++E ILS R E++A +P I + E + D ++ D + LSY++
Sbjct: 61 SIMADLVNEIVREQPAAILSSRGEKSATQPEIAMTE-DKDEADKILTAQQDFEFTLSYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ S ++VT+++ ++ + E++ Q+ ++A++ ++E K ++ GD++T+DY
Sbjct: 120 LPPIELKSVKGIKVTREVIDISDDEVNEQVLKVAESARSYESKTGKAANGDRITMDYVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD+ E + + + ++GS + LVG+K G++K I FP D+ K+LAGK+
Sbjct: 180 VDDEAFEGGTDQGAELVIGSGRFIPGFEDQLVGVKAGEEKTITVTFPADYPAKNLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K+V +P V +N++LA +LG ES ++ + +I+ L RQK+KRQILD
Sbjct: 240 TFDVTVKDVAAPGAVEINDELASKLGIESADRLKEIVRGQIESQYGSLTRQKLKRQILDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y FD P SLV+ EYNGI +V +++ + + ++ D+ +E+ + Y LA+RRV
Sbjct: 300 LDEMYKFDTPASLVDAEYNGIWSQVNNDLAQSGKTFEDEDTTEEKAREEYKTLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTE+EMQ A+Y QL ++PG EK++L+ F+ P A A +RAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEDEMQRAIYDQLRQYPGQEKQILEFFRSQPGAAASIRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSS 446
VIDH+L + + D+KVT ++L
Sbjct: 420 VIDHLLTEIDVTDKKVTKEELLAEDE 445
>gi|75676091|ref|YP_318512.1| trigger factor [Nitrobacter winogradskyi Nb-255]
gi|119370914|sp|Q3SRD1|TIG_NITWN RecName: Full=Trigger factor; Short=TF
gi|74420961|gb|ABA05160.1| trigger factor [Nitrobacter winogradskyi Nb-255]
Length = 453
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 141/453 (31%), Positives = 256/453 (56%), Gaps = 3/453 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGL+ E V IP+ + +ER++D++ K I GFRPGKVP+SH+K LYG+
Sbjct: 1 MQVNETLAEGLRHEFQVSIPAAEIAAKADERLDDLKDKVKINGFRPGKVPVSHLKKLYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ ETI++ I++ +I++ R + A P +T+ +I + G DL ++ ++
Sbjct: 61 SVMVETIEDTIRDTNMQIVNDRGLKLAGNPKVTMPSEPKEIEDI-LAGNSDLSYSVAIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
+P IE++ F + + + +V + ++D + IA+ N + + ++E GD++T+ +
Sbjct: 120 VPPIELADFKSFTIEKPVVDVSDADVDEAVERIAEQNRTYTTRAEGAKAENGDRITISFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + E S +++ ++GS L E LVG G+ + ++ FP +++ +LAGK
Sbjct: 180 GTIDGELFEGGSSEDILVVLGSNALIPGFEEQLVGAGVGETRTVKASFPGNYADSELAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + +P + ++++ A LG E +R + +++ +RQ VKR +
Sbjct: 240 DAEFETTVSLIEAPEELKIDDEFAKLLGLEELDQLRQVVREQLSAEFARAMRQHVKRALF 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD P +LVE E+ + + + EM + + ++ +EE Y +A RRV
Sbjct: 300 DRLDETHKFDAPPTLVEEEFEQVWKTIMAEMEKEKKTFADENTTEEEARAEYRRIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL IGEKN I V ++E+ AL + + PG EK++ D++Q+ P ALA++RAP+FE
Sbjct: 360 RLSLVLSEIGEKNGITVADDEINRALISRARQTPGREKEIWDYYQRNPQALAQIRAPLFE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
+KV+D IL+ I ++ VT + LF S E
Sbjct: 420 NKVVDFILELATITEKSVTREDLFKEHEAHSAE 452
>gi|104781012|ref|YP_607510.1| trigger factor [Pseudomonas entomophila L48]
gi|122403882|sp|Q1ICA9|TIG_PSEE4 RecName: Full=Trigger factor; Short=TF
gi|95109999|emb|CAK14704.1| trigger factor [Pseudomonas entomophila L48]
Length = 437
Score = 263 bits (672), Expect = 3e-68, Method: Composition-based stats.
Identities = 96/454 (21%), Positives = 213/454 (46%), Gaps = 19/454 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ +R++ +A + GFRPGKVP+S I+ +
Sbjct: 1 MQVSVENTTALERRMTIAVPAERVEKEVEKRLQQTARRAKVAGFRPGKVPMSVIRQRFEG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E ++++ E + ++ A P++ E DL+ +++
Sbjct: 61 DARQEVFGDLVQASFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEFVAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ F+ + V + EV + ++D + + K N FE E + D+V +D+
Sbjct: 112 FPEFTVAGFESINVERLSAEVADADLDNMLEVLRKQNTRFEAVERAAANDDQVNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S K Q ++GS + + LVG K G+++ + FPED+ DLAGK
Sbjct: 172 IDGEAFAGGSAKGTQLVLGSGRMIPGFEDGLVGAKAGEERVVNVTFPEDYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +P+ +N + G + S R + +++ ++ KVK Q++
Sbjct: 232 EFTITVNSVSAPVLPELNEAFFAQFGIKESSLEGFRAEVRKNMERELRQAIKTKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + ++ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPEQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ ++ E E++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFELKPDEAEVRKVIEEMASAY-QEPEQVVAWYYKNDQQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
++V+D +L+ + D+ V++++ + + +
Sbjct: 404 EQVVDTVLQKATVTDKSVSYEEAVKPAQAPAAAE 437
>gi|150396400|ref|YP_001326867.1| trigger factor [Sinorhizobium medicae WSM419]
gi|166229940|sp|A6U8Q2|TIG_SINMW RecName: Full=Trigger factor; Short=TF
gi|150027915|gb|ABR60032.1| trigger factor [Sinorhizobium medicae WSM419]
Length = 491
Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats.
Identities = 167/449 (37%), Positives = 287/449 (63%), Gaps = 1/449 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE ++GLKREL V+IP++ + NER+ +++ + I GFRPGKVP++H+K +YGK
Sbjct: 1 MQVIETLAQGLKRELKVVIPADEMEARMNERLVEVKDRVRINGFRPGKVPVAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+++ ++EI++E EIL+ R E++A +P I + E E++ +++ D + ++Y+I
Sbjct: 61 SIMADLVNEIVREKPTEILTSRGEKSATQPEIGMTEDEAE-ADKILKAEADFEFTVAYEI 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P IE+ ++VT+++ +V E E++ Q+ IA++ +E K+ ++ GD+VT+DY
Sbjct: 120 IPPIELKDASGIKVTREVVDVGEDEVNEQIERIAESARTYESKKGKAANGDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + ++ + ++GS E LVG K GD+K I FP D+ +LAGK+
Sbjct: 180 VDGEAFDGGKDEDAELVLGSNRFIPGFEEQLVGAKAGDEKTITVTFPADYPAANLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K+V + P+ +N++LA +LG ES ++ + +I+ + RQKVKRQ+LD
Sbjct: 240 TFDVTVKDVAAAAPIEINDELATKLGLESVDKLKEIVRGQIESQFGSITRQKVKRQLLDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y FD PE LV+ E+ I +++ ++ A + + D+ +EE Y LA+RRV
Sbjct: 300 LDELYQFDTPERLVDAEFENIWRQINTDLQQAGKTFADEDTTEEEARAEYRKLAQRRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK ++V+++EMQ++L+QQL +FPG EK+++++F+ P A A LRAP+FE+K
Sbjct: 360 GLVLSEIGEKAGVQVSDDEMQNSLFQQLRQFPGQEKEIIEYFRNTPGAAASLRAPLFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESS 449
V+DH+L V + D+KV+ ++L
Sbjct: 420 VVDHLLTEVSVTDKKVSKEELTAEDDADE 448
>gi|259909255|ref|YP_002649611.1| trigger factor [Erwinia pyrifoliae Ep1/96]
gi|224964877|emb|CAX56399.1| Trigger factor (TF) [Erwinia pyrifoliae Ep1/96]
gi|283479307|emb|CAY75223.1| Trigger factor (TF) [Erwinia pyrifoliae DSM 12163]
Length = 434
Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats.
Identities = 88/450 (19%), Positives = 204/450 (45%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + + + ++ + + K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITVDKDVIENAVKNELVSVAKKVRIDGFRKGKVPMTVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P G + D +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPQ---------YVPGEYKIGEDFTFSAEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV E ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPVVEVTEADVDTMLDTLRKQQATWKETDAAATAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+ I+ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGVVGRKAGETFTIDVSFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEERELPELTEEFIKRFGVEAGSLDGLRAEVRKNMQRELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +LV+ E + + ++ + E + + AKRRV
Sbjct: 292 DGLVKANDIDVPAALVDGEIDVLKRQAAQRFGG------DEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E+ +++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEDRVKALIEEMASAY-EDPSEVIEFYSKNAELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L+ ++ ++ F +L + ++ +
Sbjct: 405 EQAVEAVLEKAKVTEKATKFQELMNQTATA 434
>gi|238795543|ref|ZP_04639058.1| hypothetical protein ymoll0001_11340 [Yersinia mollaretii ATCC
43969]
gi|238720662|gb|EEQ12463.1| hypothetical protein ymoll0001_11340 [Yersinia mollaretii ATCC
43969]
Length = 434
Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats.
Identities = 87/450 (19%), Positives = 207/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + ++ + + + I GFR G VP++ ++ YG
Sbjct: 1 MQVSVETTQGLGRRVTITVAADSIEKAVKSELVKAAKSVRIDGFRKGHVPMNIVEQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKINPAGAPN---------YVPGEYKQGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV++ ++D + + K ++ + + D+ T+D+T S
Sbjct: 112 YPEVELKDLESIEVEKPVVEVNDADVDTMLETLRKQQATWKETDAAATAEDRATLDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + E ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKASDFVLAMGQGRMIPGFEEGVIGHKAGEEFTIDVNFPEDYHAENLKGKSA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G S +R + +++ + VR +VK Q +
Sbjct: 232 KFDIVLKKVEVRELPELTEEFIKRFGVADGSVAGLRAEVRKNMERELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +LVE E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANEIDVPAALVEGEIDVLRRQAAQRFGG------NEKQAAELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ ++ E +Q + + + K++++ + K + +R+ E
Sbjct: 346 VVGLLLGEVISQHELKADEARVQELIEEMASAY-EDPKEVIEFYSKNKELMNNMRSVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ ++ TF +L + ++ +
Sbjct: 405 EQAVETLLAKAKVTEKPTTFSELMNQTTTA 434
>gi|119774360|ref|YP_927100.1| trigger factor [Shewanella amazonensis SB2B]
gi|166229933|sp|A1S4X4|TIG_SHEAM RecName: Full=Trigger factor; Short=TF
gi|119766860|gb|ABL99430.1| trigger factor [Shewanella amazonensis SB2B]
Length = 434
Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats.
Identities = 96/448 (21%), Positives = 217/448 (48%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ NE ++ +A I GFRPGKVP+S + YG
Sbjct: 1 MQVSVETTQGLERRLTISVPAEQIEKLVNESLKREAKRARIPGFRPGKVPMSVVSKRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + EI++ E + A P+ ++D + ++++
Sbjct: 61 AIRQDVTGEIMQRNFVEAIIAEKLNPAGAPTFMPGASDAD----------KFEFVATFEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V Q +V + ++D + + K + F+ +E GDKV +++ S
Sbjct: 111 YPEVELKGLDAIEVEQPKADVTDADVDSMIETLRKQHATFDAAPRAAEEGDKVVINFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + + + +GS + E + G K G++ EI+ FPE++ ++L GK
Sbjct: 171 VDGEEFQGGKAEGFELQLGSGRMIPGFEEGIKGHKAGEEFEIDVTFPEEYHAENLKGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ + + + E ++ VK Q++
Sbjct: 231 KFAITLTEVKAANLPEVNDEFAKLFGITDGGVEALKAEIRKNMSRELEQALKANVKEQVI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++P++L++ E N + ++ N ++ E + + A+RRV
Sbjct: 291 NGLLAANDIELPKALIDGEINVLRRQAVQRFGG------NAANMPELPAELFAEQAERRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + ++V EE +Q+ + + ++++++ + +R E
Sbjct: 345 KVGLLLGEVIKSTELKVEEERVQALIASMASAY-EDPAEVIEYYNGNKELMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LKS ++ +++V F++ + ++
Sbjct: 404 EQAVEALLKSAKVTEKEVAFEEFMNKAT 431
>gi|294677544|ref|YP_003578159.1| trigger factor [Rhodobacter capsulatus SB 1003]
gi|12230722|sp|O68129|TIG_RHOCA RecName: Full=Trigger factor; Short=TF
gi|3128367|gb|AAC16219.1| trigger factor [Rhodobacter capsulatus SB 1003]
gi|294476364|gb|ADE85752.1| trigger factor [Rhodobacter capsulatus SB 1003]
Length = 444
Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats.
Identities = 115/452 (25%), Positives = 224/452 (49%), Gaps = 11/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGLKR + + L E++ +++ + IKGFR GKVP++ ++ +G
Sbjct: 1 MQVTQTLNEGLKRGYTITLTGAELDAKVTEKLIEVQPEVEIKGFRKGKVPMAMLRKNFGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L + ++E + + ++L + +R A++P + + G + D +SY+
Sbjct: 61 RVLGDVLNESVDGAIKDLLDQSGDRPALQPKVEMENG------KDWKPGTDAIFTVSYEA 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I + + + + + DE + + +AK+ AFE ++ +++ GD+V +D+
Sbjct: 115 LPPIPAFDRATVTLERLVVKADEASVTEALENLAKSAQAFEDRKKGTKAKDGDQVVIDFE 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + E + ++GS + LVG K G+ E++ FP ++ LAGK
Sbjct: 175 GFLGDEPFEGGKGEEYPLVLGSNSFIPGFEDQLVGAKAGEDVEVKVTFPAEYGAAHLAGK 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V +P P ++++LA + G A++G + +++ + R +KR +L
Sbjct: 235 EATFKCHVHAVKAPKPAEIDDELAKKFGAADLEALKGQVASRLEAEYKGASRAILKRALL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD+P SLVE E I ++ E N D E + + LA+RRV
Sbjct: 295 DILDAQVKFDLPPSLVEAEAGQIAHQLWHE---ENPDHHGHDHGAVEPTEEHKTLAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G IEVT+ EM A+ ++PGHE++ + + ++RAP++E
Sbjct: 352 RLGLLLAELGRNEKIEVTDAEMTQAVLAAARQYPGHEREFFEFVKGNAQMQQQIRAPLYE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
+KVID I+ + +++V+ ++L
Sbjct: 412 EKVIDFIVAGAAVTEKEVSKEELQKAIEALDE 443
>gi|156935011|ref|YP_001438927.1| trigger factor [Cronobacter sakazakii ATCC BAA-894]
gi|166229045|sp|A7MFI9|TIG_ENTS8 RecName: Full=Trigger factor; Short=TF
gi|156533265|gb|ABU78091.1| hypothetical protein ESA_02862 [Cronobacter sakazakii ATCC BAA-894]
Length = 432
Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats.
Identities = 87/448 (19%), Positives = 210/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + ++ + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIENAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRHFVDAIIKEKINPAGAPN---------YVPGEYKLGEDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEVELKGLESIEVEKPVVEVTDADVDTMLDTLRKQQATWKDKDGAADAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLAMGQGRMIPGFEEGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR ++K Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGAVRNRIKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + N DVP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 EGLVNANNIDVPAALIDGEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E+ +++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEDRVKALIEEMASAY-EDPSEVIEFYSKNNELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKPTSFNELMNQQA 432
>gi|294635323|ref|ZP_06713820.1| trigger factor [Edwardsiella tarda ATCC 23685]
gi|291091299|gb|EFE23860.1| trigger factor [Edwardsiella tarda ATCC 23685]
Length = 433
Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats.
Identities = 90/447 (20%), Positives = 207/447 (46%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL R +++ + ++ + + + ++ KA I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTEGLGRRVNITVAADSIEKAVESELRNVAKKARIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K P G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKLNPVGAPK---------YVPGEYKLGDDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ D + V + + EV + ++D + + K ++ KE E D+ T+D+T S
Sbjct: 112 YPEIELKGLDTIVVEKPLVEVKDADVDAMVETLRKQQASWVAKEGEVAGEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +G + + ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEVFEGGKATDFVLAMGQGRMIPGFEDGILGHKAGEEFVIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + + R G ++ + + + + VR ++K Q+L
Sbjct: 232 KFDIVLKKVEERELPEMTAEFIKRFGVADGSLEGLKAEVRKNMTRELKNAVRNRIKAQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +LV+ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANEIDVPAALVDGEIDVLRRQAAQRFGG------NEQQAMELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + KN ++ + + + + + + +++++ + K + +R E
Sbjct: 346 IVGLLLGEVISKNELKADDARVNALIEEMASAY-EDPQEVIEFYSKNKEMMNNMRNMALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ ++ +L ++ +++ TF++L +
Sbjct: 405 EQAVELLLAQAKVSEKETTFNELMNQP 431
>gi|167032909|ref|YP_001668140.1| trigger factor [Pseudomonas putida GB-1]
gi|189035948|sp|B0KJG5|TIG_PSEPG RecName: Full=Trigger factor; Short=TF
gi|166859397|gb|ABY97804.1| trigger factor [Pseudomonas putida GB-1]
Length = 437
Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats.
Identities = 95/445 (21%), Positives = 214/445 (48%), Gaps = 19/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ + N+R++ +A I GFRPGKVP++ I+ +
Sbjct: 1 MQVSVENTSALERRMTIAVPAERVENEVNKRLQQTAKRAKIAGFRPGKVPMNVIRQRFEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E ++++ E + ++ A P++ E DL+ +++
Sbjct: 61 DARQEAFGDLVQASFYEAIVEQKLNPAGAPAVEPKS---------FEKGKDLEFVAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +S + + V + EV + ++D + + K N FE E ++ D+V +D+
Sbjct: 112 FPEFTVSGLESINVERLSAEVADADLDNMLEVLRKQNTRFEAVERAAQNDDQVNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S K Q ++GS + + LVG K G+++ + FPED+ DLAGK
Sbjct: 172 VDGEVFAGGSAKGTQLVLGSGRMIPGFEDGLVGAKAGEERVVNVTFPEDYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +P+ +N + + G + + R + +++ ++ KVK Q++
Sbjct: 232 EFTITVNSVSAPVLPELNEEFFAQFGIKESTLEGFRAEVRKNMERELRQAIKTKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + ++ ++ + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPEQLPVELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ ++ + +++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFELKPDDAKVREMIEEMASAY-QEPEQVIAWYYKNDQQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
++V+D +L+ + D+ V+++
Sbjct: 404 EQVVDTVLQKATVTDKSVSYEDAVK 428
>gi|292493105|ref|YP_003528544.1| trigger factor [Nitrosococcus halophilus Nc4]
gi|291581700|gb|ADE16157.1| trigger factor [Nitrosococcus halophilus Nc4]
Length = 443
Score = 263 bits (670), Expect = 6e-68, Method: Composition-based stats.
Identities = 106/457 (23%), Positives = 221/457 (48%), Gaps = 16/457 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R L + +P + ER+ + + + GFRPGKVP ++ YG
Sbjct: 1 MQVTVEATGELERRLTITLPGGDFENRVQERLRSMAPRVKMDGFRPGKVPYKVVERRYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E +DE ++ + + + R A P I ++ E + ++++
Sbjct: 61 AVRQEVLDEFVQNSFRDAIQQESLRPAGPPRIEPSQW---------EAGKPFEYTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE S + ++V + E +K+ID + ++ +V +E E ++ GD VT+ Y +
Sbjct: 112 LPDIESISLEGIKVKRPQAETTDKDIDSVLEKLRNQHVEWEPAERPAQEGDGVTITYHGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ S+++ I+G L E + L+G + G + E FPED+ ++LAGKKV
Sbjct: 172 IEGEPFPGGSREDFFAILGKGTLLDEFEKHLIGAEKGQELNFEVTFPEDYGNRELAGKKV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ V +P +N D A +LG + +R + ++ + +R +++ Q++
Sbjct: 232 DFVVKVTSVATPRLPEINEDFAEKLGIQEGGVEGLRQEIKASMIRNLDQAIRDRLRDQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +P SLVE E + ++ + ++ K+Q + + ++ A+RRV
Sbjct: 292 DGLLAANPITLPTSLVEEETRALREQTQANLARQGIKTQELPVDESLFIE----QARRRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++LGT+ EK I+ +E+++ + + + ++ +E+ + E
Sbjct: 348 ALRLILGTLLEKQGIKADQEKVKQRIAELAANY-EDPEEFSRWIFSDRERFSEIEGAVLE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
+++D +L V+++D ++F++ + S ES +K+ D
Sbjct: 407 AQLVDWVLDQVEVLDEPMSFEEAVNPSVESPEKKVSD 443
>gi|291616548|ref|YP_003519290.1| Tig [Pantoea ananatis LMG 20103]
gi|291151578|gb|ADD76162.1| Tig [Pantoea ananatis LMG 20103]
Length = 434
Score = 263 bits (670), Expect = 6e-68, Method: Composition-based stats.
Identities = 84/450 (18%), Positives = 208/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + S+ + + + + D+ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRITITVASDSIESAVKKELVDVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G D + +++
Sbjct: 61 SVRQDVLGDLMTRNFVDAIIKEKINPAGAPN---------YVPGEYTEGQDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + +V + ++D + + K + + + D+ T+D+T S
Sbjct: 112 YPEVELKGLENIEVEKPQVQVTDADVDTMLETLRKQQANWIETDAAAGAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + + +G + E +VG K G+ I+ FP+D+ ++L GK
Sbjct: 172 VDGEEFDGGKASDFVLAMGQGRMIPGFEEGVVGHKAGETFTIDVKFPDDYHAENLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + + R G E S +R + +++ + +R +VK Q +
Sbjct: 232 KFEIVLKKVETRELPELTEEFIKRFGVEEGSVDGLRAEVRKNMERELKGAIRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L+++E + + ++ + E + + AKRRV
Sbjct: 292 DGLVDANPIDVPAALIDSEIDVLRRQAAQRFGG------DEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E+ ++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEDRVKVLIEEMASAY-EDPQEVIEFYSKNNELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ +++ F +L + ++++
Sbjct: 405 EQAVEAVLAKAKVSEKETNFQELMNQTAQA 434
>gi|319943619|ref|ZP_08017900.1| trigger factor [Lautropia mirabilis ATCC 51599]
gi|319742852|gb|EFV95258.1| trigger factor [Lautropia mirabilis ATCC 51599]
Length = 436
Score = 263 bits (670), Expect = 6e-68, Method: Composition-based stats.
Identities = 88/445 (19%), Positives = 197/445 (44%), Gaps = 14/445 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R L + + ++ ER+ + + GFRPGKVP+ I+ YG
Sbjct: 1 MASQLETTGTLERRLTLSVNPADISSKVQERLRSMAKTTRMPGFRPGKVPVRLIEQSYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ SE + E I + + + R A +P I + + ++++
Sbjct: 61 QVHSEVLGEAISRAFSDAVQAENLRVAGQPEIAPKDESQGPNATE--------FVATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +++ L+V + VD+K ++ + + K ++ + E GD+ T+D+
Sbjct: 113 YPDVKLGDPATLEVDRYNASVDDKALEATIDVLRKQRTRWKAVDRAGEKGDRATIDFVGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S + ++G + + ++G K G+ + FP+D++ + LAGK
Sbjct: 173 LDGEAFPGGSAEGFPMVLGEGRMLPDFEAGVLGKKAGETVTFDVKFPDDYNAEHLAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ I++V +P V+ D A ++G E R +++ V+ + K ++
Sbjct: 233 QFEVKIQKVEAPELPEVDADFARQMGQEDGDVEKFRADVRTNLEREVRQRVQSRTKSSVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D I ++P++LV E + ++R ++ + ++ + A RRV
Sbjct: 293 DKIVGLADIELPKALVAQEAESLAARMREDLQARGV---DLRKAPPVPTDAFTEQATRRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + +N ++ E+++ + + + + +++ + + LAE+ A + E
Sbjct: 350 RLGLIVSEVVRENALQAKPEQIRKQIEEFASTY-ENPAEVIRWYFSDRDRLAEVEALVVE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
V+D +L ++ D +V+FD+L
Sbjct: 409 QNVVDWLLSKAKVTDHEVSFDELMK 433
>gi|260576389|ref|ZP_05844380.1| trigger factor [Rhodobacter sp. SW2]
gi|259021460|gb|EEW24765.1| trigger factor [Rhodobacter sp. SW2]
Length = 444
Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 121/452 (26%), Positives = 223/452 (49%), Gaps = 11/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V +EGLKR + + + L E++ + + + +KGFR GKVP++ ++ YG
Sbjct: 1 MTVTPTLNEGLKRGYTITVTAAELDAKVQEKLIEAQPEIEMKGFRKGKVPMAMLRKQYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + + I + +R A++P I + + + D+ + +SY+
Sbjct: 61 RMMGDAMQDAIDSAMKAHFEATGDRPALQPEIKM------VGGDEWQQGKDVVVEVSYEA 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I + + + + + + ID + +A + FE K+ +++ GD+V +D+
Sbjct: 115 LPAIPDVDSSKITLDRLNVKAEAEAIDEALKNLAASAQNFEDKKKGSKAKDGDQVVIDFA 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + ++ ++GS E L G K GD+ ++ FP+++ LAGK
Sbjct: 175 GSVDGVAFEGGTAEDYPLVLGSGSFIPGFEEQLTGAKAGDEVSVKVTFPKEYGAAHLAGK 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K V + P ++++LA + G E +A++G ++++ + R +KR +L
Sbjct: 235 DAVFACTVKAVKAAKPAEIDDELAKKYGAEDLAALKGQIGERLEAEYKGAARAIMKRSLL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +FD+P SLV+ E I ++ E + + + E + LA RRV
Sbjct: 295 DQLDALVSFDLPASLVDAEAAQIAHQLWHE---EHPDVHDHNHGATEPNDEHKALAVRRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG K + VT+ EM A+ Q ++PG E++ + QK P +LRAPIFE
Sbjct: 352 RLGLLLAEIGRKAEVTVTDAEMTQAVLAQARQYPGQERQFFEFVQKNPQMQQQLRAPIFE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D I+ + D+ VT ++L
Sbjct: 412 DKVVDFIVAGAVVTDKTVTKEELTKAIEALDE 443
>gi|222148821|ref|YP_002549778.1| trigger factor [Agrobacterium vitis S4]
gi|254788980|sp|B9JWZ2|TIG_AGRVS RecName: Full=Trigger factor; Short=TF
gi|221735807|gb|ACM36770.1| trigger factor [Agrobacterium vitis S4]
Length = 493
Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats.
Identities = 170/447 (38%), Positives = 279/447 (62%), Gaps = 1/447 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKREL VIIP+ + NER+ D++ K I GFRPGKVP H+K +YGK
Sbjct: 1 MQVIETLAEGLKRELKVIIPAADMEAQMNERLADVKDKVRINGFRPGKVPAGHLKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E ++EI+++ ILS+R E++A +P + + E E++ ++ D + L+Y++
Sbjct: 61 SVMAELVNEIVRDRPSAILSERGEKSATQPEVAMTEDEAE-ADKILNAQADFEFTLAYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P IE+ D +++ +++ EV E E++ Q+ +IA++ F K+ + GD+VT+DY
Sbjct: 120 IPAIELKPVDGIKIVREVVEVSEDEVNEQIMKIAESARTFATKDGVAADGDRVTMDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD V + ++ + ++GS E LVGLK GD+K I FP ++ +LAGK
Sbjct: 180 VDGVPFDGGKDEDAELVIGSNRFIPGFEEQLVGLKAGDEKVINVTFPTEYPAANLAGKDA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV +P +N++LA +LG ES ++ + +I+ + RQK+KRQILD
Sbjct: 240 TFDITVKEVAAPAETEINDELATKLGLESVDKLKEIVRGQIESQYGNVTRQKIKRQILDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P LV+ E++ I +++ ++ + + ++ ++ ++ + Y LA+RRV
Sbjct: 300 LDEMYKFEAPSRLVDAEFDNIWRQINTDLQQSGKTFEDEETTEDAAREEYRALAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK I+VTEEEMQ ALY QL +FPG EK+++D F+ P A A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAAIDVTEEEMQRALYAQLQQFPGQEKQIIDFFRNTPGASASLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSE 447
V+D ++ V + D+ VT ++L +
Sbjct: 420 VMDKLISEVNVTDKTVTKEELLAEDED 446
>gi|254469711|ref|ZP_05083116.1| trigger factor [Pseudovibrio sp. JE062]
gi|211961546|gb|EEA96741.1| trigger factor [Pseudovibrio sp. JE062]
Length = 448
Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats.
Identities = 152/451 (33%), Positives = 280/451 (62%), Gaps = 5/451 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKREL V+IP+ L + ++D++SK NI GFRPGKVP+SH+K ++G+
Sbjct: 1 MQVSETLAEGLKRELKVVIPATDLATRLDAYLDDMKSKVNINGFRPGKVPVSHLKKIHGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++E I +I E + + +R E+ A++P I + E D ++ G DL ++Y++
Sbjct: 61 QAMAELIGNLINETTAKTIEERKEKPALQPEIDLPE---DDAEKVLAGEADLAFTMTYEV 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD--KVTVDYT 178
LP+ E+ F +++ + I E+ ++E+D Q+ +IA++N FE +E + D +VT+ Y
Sbjct: 118 LPEFELVDFAKIELERPIVEIADEEVDEQVKQIAESNRPFEAREEGAAAEDGDRVTMHYL 177
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + +N Q ++GS E +VG+K GD+K I+ FPE++ +LAG+
Sbjct: 178 GKLDGEPFDGGEDENGQLVLGSGQFIPGFEEQIVGMKIGDKKVIDVTFPEEYGAANLAGR 237
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V + +K + +P V +++++A +LG ES ++ + +I+ RQKVKR +L
Sbjct: 238 AVTFDIDVKGIEAPGEVSIDDEMATKLGLESLDKLKEIVRGQIESQFGAATRQKVKRALL 297
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +Y+F++PE L+E E+ G+ ++V +M + + ++ ++ ++E Y +++RRV
Sbjct: 298 DKLDEEYSFELPEKLLETEFEGVWKQVEADMQQSGKTFEDEETTEDEAKAEYRKISERRV 357
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL +GE+N ++VT+EE+Q AL+ ++ +FPG E+++ + ++ ALA LRAPI+E
Sbjct: 358 RLGLVLSEVGEQNKVQVTDEEVQKALFDRVRQFPGQEQQVFEFYKNNEQALASLRAPIYE 417
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
+KV+D+IL+ ++ D+ V+ ++L + +
Sbjct: 418 EKVVDYILELAKVTDKVVSKEELLAQDEDEA 448
>gi|157374679|ref|YP_001473279.1| trigger factor [Shewanella sediminis HAW-EB3]
gi|189035957|sp|A8FTH8|TIG_SHESH RecName: Full=Trigger factor; Short=TF
gi|157317053|gb|ABV36151.1| trigger factor [Shewanella sediminis HAW-EB3]
Length = 434
Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats.
Identities = 97/450 (21%), Positives = 214/450 (47%), Gaps = 19/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + + +++ +A I GFRPGKVP+S I YGK
Sbjct: 1 MQVSVETTQGLERRLTISVPAEQIEKAVTDSLKNEAKRARIPGFRPGKVPVSVINKRYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + E+++ E + A P+ + T + +++I
Sbjct: 61 AIRQDITGEVMQRNFIEAIIAEKLNPAGAPTFVAGDT----------DTENFNFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E++ D + V Q EV + ++D + + K + FE E ES +GDK +++ S
Sbjct: 111 YPEVELTGLDAITVEQPTSEVTDADVDTMIETLRKQHATFEAVERESVVGDKAKINFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ + +GS + + G K G++ +IE FPED+ ++L GK
Sbjct: 171 IDGEEFEGGKAEDFELELGSGRMIPGFESGVEGHKAGEEFDIEVTFPEDYHAENLKGKVA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ EV + VN++ A G A++ + + + E ++ VK Q+L
Sbjct: 231 NFVITLNEVLAANLPEVNDEFAKLFGVTDGGLEALKAEIRKNMGRELEQALKANVKEQVL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + ++P+ L++ E + ++ ++ E + A+RRV
Sbjct: 291 NGLLEQNNIELPKPLIDGEVEVLRKQAMQRFGDQ------AANMPELPADLFTEQAERRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ ++ +QS + + +++ ++ L +R E
Sbjct: 345 KVGLLLGEVIKTNELKAEDDRVQSLIASMASAY-EDPSEVVAYYNGNEEMLQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +LK+ ++ ++ V F++ + +++
Sbjct: 404 EQAVEALLKTAKLTEKAVNFEEFMNKATQQ 433
>gi|294083691|ref|YP_003550448.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663263|gb|ADE38364.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 498
Score = 262 bits (669), Expect = 9e-68, Method: Composition-based stats.
Identities = 128/465 (27%), Positives = 225/465 (48%), Gaps = 24/465 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E SEGL RE + I + + ++ +I AN+ GFRPGKVP++ +K+ +G
Sbjct: 1 MNIAETKSEGLVREFAITITAADIETETQAKLAEIAKTANMPGFRPGKVPMAVVKTRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + I + E + + A +PS+ I E DL+ + +I
Sbjct: 61 QVQGDAIKAALDEGARKAVDDNGLNLASQPSVDIKSY---------EEGKDLEAVFTCEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
+P+I+I L + + + VDE +ID + IA N K ++ GD V +D+
Sbjct: 112 MPEIKIPDLSKLSIEKPVLPVDEAQIDEALTTIATENRPSVEVAKPRAAKKGDIVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + + + +GS + L+G+K G+ +++ FP+D+ LAGK
Sbjct: 172 GKIDGEPFDGGAAEGHSLELGSNSFIPGFEDGLIGVKPGESRDVNVSFPDDYQAPHLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V+ DLA RLGFE+ A++ +++ +RQ VK+ +L
Sbjct: 232 AAVFETKVTAMRELGDAKVDEDLATRLGFETIDALKEAVREQLGAQHATALRQAVKKNVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVR-------------FEMSSANQKSQNVDSIDEE 345
D +++ FDVP SL + EY + + + + + + +D++
Sbjct: 292 DGLADGEAFDVPPSLFKQEYESVARAMNPAASEHNHDHDHDHDHDHDHAHPAADEGMDDD 351
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+A+RRV G++L IG + IEVTE + Q A+ ++ R+PG E+ ++++FQK
Sbjct: 352 AKAEATSVAERRVRLGLLLTEIGRDSKIEVTEADTQRAVIEEARRYPGQEQMVMEYFQKN 411
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
AL +L PIFEDKVID+IL+ ++ + D L+ E +P
Sbjct: 412 QQALQQLAGPIFEDKVIDYILELAKVTEVTTDVDTLYKAPEEVAP 456
>gi|26989023|ref|NP_744448.1| trigger factor [Pseudomonas putida KT2440]
gi|24983846|gb|AAN67912.1|AE016423_7 trigger factor [Pseudomonas putida KT2440]
Length = 443
Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 94/445 (21%), Positives = 214/445 (48%), Gaps = 19/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ + N+R++ +A I GFRPGKVP++ I+ +
Sbjct: 7 MQVSVENTSALERRMTIAVPAERVENEVNKRLQQTAKRAKIAGFRPGKVPMTVIRQRFEA 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E ++++ E + ++ A P++ E DL+ +++
Sbjct: 67 DARQEAFGDLVQASFYEAIVEQKLNPAGAPAVEPKS---------FEKGKDLEFVAIFEV 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ + ++V + EV + ++D + + K N FE E ++ D+V +D+
Sbjct: 118 FPEFTVAGLESIKVERLSAEVADSDLDNMLEVLRKQNTRFEAVERAAQNDDQVNIDFVGK 177
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD S K ++GS + E LVG K G+++ + FPED+ DLAGK
Sbjct: 178 VDGEAFAGGSAKGTLLVLGSGRMIPGFEEGLVGAKAGEERVVNVTFPEDYQNLDLAGKAA 237
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +P+ +N + + G + + R + +++ ++ KVK Q++
Sbjct: 238 EFTITVNSVSAPVLPELNEEFFAQFGIKESTLEGFRAEVRKNMERELRQAIKTKVKNQVM 297
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + ++ ++ + AKRRV
Sbjct: 298 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPEQLPVELFEEQAKRRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ ++ + +++ + + + ++++ + K L E+R+ + E
Sbjct: 351 VLGLIVAEVVKQFELKPDDAKVREMIEEMASAY-QEPEQVIAWYYKNDQQLNEVRSVVLE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
++V+D +L+ + D+ V++++
Sbjct: 410 EQVVDTVLQKATVTDKSVSYEEAVK 434
>gi|327392980|dbj|BAK10402.1| trigger factor Tig [Pantoea ananatis AJ13355]
Length = 434
Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 85/450 (18%), Positives = 208/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + + S+ + + + + D+ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRITITVASDSIESAVKKELVDVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G D + +++
Sbjct: 61 SVRQDVLGDLMTRNFVDAIIKEKINPAGAPN---------YVPGEYTEGQDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + +V + ++D + + K + + + D+ T+D+T S
Sbjct: 112 YPEVELKGLENIEVEKPQVQVTDADVDTMLETLRKQQANWIETDAAAGAEDRATIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+ I+ FP+D+ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGVVGHKAGETFTIDVKFPDDYHAENLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + + + R G E S +R + +++ + +R +VK Q +
Sbjct: 232 KFEIVLKKVETRELPELTEEFIKRFGVEEGSVDGLRAEVRKNMERELKGAIRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L+++E + + ++ + E + + AKRRV
Sbjct: 292 DGLVDANPIDVPAALIDSEIDVLRRQAAQRFGG------DEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E+ ++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEDRVKVLIEEMASAY-EDPQEVIEFYSKNNELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L ++ +++ F +L + ++++
Sbjct: 405 EQAVEAVLAKAKVSEKETNFQELMNQTAQA 434
>gi|289207757|ref|YP_003459823.1| trigger factor [Thioalkalivibrio sp. K90mix]
gi|288943388|gb|ADC71087.1| trigger factor [Thioalkalivibrio sp. K90mix]
Length = 435
Score = 262 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 107/452 (23%), Positives = 225/452 (49%), Gaps = 19/452 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R++ + +P R+ + R++ + + + GFRPGKVPL ++ YG
Sbjct: 1 MQVSVEATGNLERKMTIQVPPERVETEVDNRLKSLAKRVRLDGFRPGKVPLKVVRQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E+++E E + + A PSI +E ++ S+ +
Sbjct: 61 GVYQEVLSEVLQESYREAVQQEGLEPAGNPSIE---------PQSVESGQPIEFVASFQV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E++ F D ++ + + E+ +++IDR + + + N + + +++ GD++T+D+ S
Sbjct: 112 FPEVEVADFSDAKIERPVAEIGDEDIDRVIDSLREQNKEWADVKRKAKKGDRITLDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + Q VG+ L + + L G+KTG++ I+ FP+D+ ++L GK
Sbjct: 172 IDGEEFEGGKADDFQVEVGAGRLIEDFEKQLKGVKTGEEPTIDVTFPDDYPAENLKGKTA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +IK+V P V+ + A + G E +R +++ ++ KVK Q++
Sbjct: 232 QFALTIKKVEGPKLPEVDEEFAKKFGIEDGSVEKLRADVRSNMERELNQALKGKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ I ++ FD+P++LV++E N + ++ A + AKRRV
Sbjct: 292 ELIIERHGFDLPDALVKSEINRLREEAEKRFGGAQ-------QTQPLPDSLFEEEAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+ L I ++ EV E ++ L + +++ +++ P A + L + + E
Sbjct: 345 RLGLALRAIIDQKGFEVDAERVERDLEDMAATY-EDPEEVKQYYRSNPQAKSNLESLVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
D+V+D I+ ++ ++K +F + + + ES+
Sbjct: 404 DQVVDWIVDQAKVTEKKTSFQDVMNPNKESTE 435
>gi|49474320|ref|YP_032362.1| trigger factor [Bartonella quintana str. Toulouse]
gi|67461756|sp|Q6FZK6|TIG_BARQU RecName: Full=Trigger factor; Short=TF
gi|49239824|emb|CAF26215.1| Trigger factor [Bartonella quintana str. Toulouse]
Length = 469
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 168/473 (35%), Positives = 288/473 (60%), Gaps = 7/473 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ +++P+ L + NE ++D + K + GFRPGKVP +++ +YGK
Sbjct: 1 MQVTETLNEGLKREIKIVVPAKALEEKLNEWLDDTKDKIKLNGFRPGKVPAEYLRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E ++EII + IL+ R+ER AM+P I I D +++G D L Y++
Sbjct: 61 SFMAEILNEIISDAPRSILADRNERPAMQPQIDI-----DEDEKILDGRADFVFSLKYEV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+ EI FD +++ ++I V EKEID Q+ + + ++ +KE SE GD VT+DY
Sbjct: 116 LPKFEIKDFDHIEIIREIAAVPEKEIDEQVERVLSSTRSYSLKEGLSEEGDCVTIDYLGK 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ V E + + Q I+GS E LV +K GD K I FP+++S LAG+
Sbjct: 176 LEGVPFEGGADSDAQLILGSKQFIPGFEEQLVDVKAGDTKTISVKFPDNYSAVHLAGRDA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K + P + ++++ A ++G ES +R + +I+ ++RQK+KRQILD
Sbjct: 236 EFDITVKAISKPDELKIDDEAAKKVGLESLERLREVVRGQIESQYGSIIRQKIKRQILDA 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F++PE L+E E+N I +V ++ A + ++ ++ + Y +LA+RRV
Sbjct: 296 LDADYNFEIPEGLLEIEFNNIWAQVNDDLKKAGRSFEDEGVTEKHAREEYRVLAQRRVRL 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IG K +++++E+E+++A++ Q+ ++PG EK++++ F+ P A+A LRAPIFE+K
Sbjct: 356 GLVLSEIGMKADVKISEDELKAAVFDQVRQYPGQEKEIMNFFRNTPEAVANLRAPIFEEK 415
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSES--SPEKLLDKSSKVETFQSEEAPSE 471
VIDH+L ++I D++VT ++L ES + +K K +T ++AP +
Sbjct: 416 VIDHLLSRIKITDKEVTVEELMKEYDESDLTEKKPEKKKGVEKTPIRKKAPKK 468
>gi|148548678|ref|YP_001268780.1| trigger factor [Pseudomonas putida F1]
gi|166229921|sp|A5W636|TIG_PSEP1 RecName: Full=Trigger factor; Short=TF
gi|148512736|gb|ABQ79596.1| trigger factor [Pseudomonas putida F1]
Length = 437
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 94/445 (21%), Positives = 213/445 (47%), Gaps = 19/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ + N+R++ +A I GFRPGKVP++ I+ +
Sbjct: 1 MQVSVENTSALERRMTIAVPAERVENEVNKRLQQTAKRAKIAGFRPGKVPMTVIRQRFEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E ++++ E + ++ A P++ E DL+ +++
Sbjct: 61 DARQEAFGDLVQASFYEAIVEQKLNPAGAPAVEPKS---------FEKGKDLEFVAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ + ++V + EV + ++D + + K N FE E ++ D+V +D+
Sbjct: 112 FPEFTVAGLESIKVERLSAEVADSDLDNMLEVLRKQNTRFEAVERAAQNDDQVNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD S K ++GS + E LVG K G+++ + FPED+ DLAGK
Sbjct: 172 VDGEAFAGGSAKGTLLVLGSGRMIPGFEEGLVGAKAGEERVVNVTFPEDYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +P+ +N + G + + R + +++ ++ KVK Q++
Sbjct: 232 EFTITVNSVSAPVLPELNEAFFAQFGIKESTLEGFRAEVRKNMERELRQAIKTKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + ++ ++ + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPEQLPVELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ ++ + +++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFELKPDDAKVREMIEEMASAY-QEPEQVIAWYYKNDQQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
++V+D +L+ + D+ V++++
Sbjct: 404 EQVVDTVLQKATVTDKSVSYEEAVK 428
>gi|254418969|ref|ZP_05032693.1| trigger factor [Brevundimonas sp. BAL3]
gi|196185146|gb|EDX80122.1| trigger factor [Brevundimonas sp. BAL3]
Length = 457
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 132/440 (30%), Positives = 240/440 (54%), Gaps = 7/440 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV+EK +EGL R V IP L + R++++ + +KGFRPGKVP++H+K +G+
Sbjct: 11 MQVVEKSNEGLSRVFAVTIPVAELNEKLEARVKEVAPQVKLKGFRPGKVPVAHVKKTFGR 70
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E I+ + E + L + R A + + + +G DL ++ +I
Sbjct: 71 EFMGEIINAELNETSQKALDEAKIRPAAPAEMKLTSDMDKVMAGQ----EDLAYEMALEI 126
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---EIGDKVTVDY 177
+P L++ + E + ++D + E+A ++E K+ ++ GD++T+D+
Sbjct: 127 MPDFTPVDPKTLKLERPTYEASDADLDEALTELAGQAKSYEDKKGKTVKAAEGDQLTIDF 186
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D + + ++ ++GS E L G K G++K IE FPE++ LAG
Sbjct: 187 LGKLDGEPFDGGAAEDADLVIGSGRFIPGFEEQLTGAKVGEEKTIEVTFPENYQAAHLAG 246
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + ++K + + + V+ D A R+G ES ++ L SQ + Q R K+KR +
Sbjct: 247 KLATFDVNVKAIKAEVEAKVDEDFAKRIGLESLDKLKELLSQNLNQQYAGAARFKLKRAL 306
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + + F +P +VE E++GI Q+V + ++ ++ DE+ Y +A+RR
Sbjct: 307 LDQLDAAHDFPLPPKMVEAEFDGIWQQVEADKAAGRLPEEDAAKSDEDLKAEYRKIAERR 366
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL IG NN++VT++E+ +AL Q+ +PG E+ +L+ +++ PNA A++RAPI+
Sbjct: 367 VRLGLVLAEIGRANNVQVTDQELNAALLQEARNYPGQEQAVLNFYRQNPNAAAQMRAPIY 426
Query: 418 EDKVIDHILKSVQIVDRKVT 437
E+KV+D I+ ++ D+ +T
Sbjct: 427 EEKVVDLIVGLAEVTDKPIT 446
>gi|226939791|ref|YP_002794864.1| trigger factor [Laribacter hongkongensis HLHK9]
gi|254789006|sp|C1D538|TIG_LARHH RecName: Full=Trigger factor; Short=TF
gi|226714717|gb|ACO73855.1| Tig [Laribacter hongkongensis HLHK9]
Length = 436
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 99/447 (22%), Positives = 213/447 (47%), Gaps = 13/447 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + L+R LD+ +P + +R+ + A I GFRPGK PL ++ YG
Sbjct: 1 MQVQLETLGNLERRLDIALPLTDIDAEVQKRLARVARTAKIAGFRPGKAPLKMVERNYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E ++ + ++++ R A P + + K ++++
Sbjct: 61 SVREDVLGEQVQLGFSKAVAEQKLRVAGYPRFEP-------AADNDPAAGEFKFSATFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + S D +V + +CEV + EID+ + + K F E + D+V +D+
Sbjct: 114 YPELTLGSLDGKEVEKAVCEVTDAEIDKTIDVLRKQRTRFNRVERAAADTDRVIIDFAGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S +N F++G + E ++G+K G+ K++E FP D+ KD+AGK
Sbjct: 174 IDGEAFAGGSSENFPFVLGQGQMLPEFEAGVIGMKEGESKDVEVSFPADYHGKDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K V + ++ D A LG S +R + +K+ + + K ++
Sbjct: 234 VFTITVKNVAEAILPEIDADFAKALGITDGDVSKLRAEIEKNVKREIARRLAARNKEAVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++P+SLV E + ++ + + +++ +V S+ + + A RRV
Sbjct: 294 QVLIDANPLELPQSLVMMEISRLMHQAKQDLAQRGM---DVKSLPDLPADLFRDQAARRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + + N ++ + E++++ + + + H ++++ + + P L + E
Sbjct: 351 ALGLILAELVKANELKASPEQIKARVEEWADSY-EHPEEVIKWYYESPERLEGPENLVLE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
D V++ +L ++ ++ V+FD+L N+
Sbjct: 410 DNVVEFVLSQAKVNEKAVSFDELMGNA 436
>gi|88800034|ref|ZP_01115604.1| trigger factor [Reinekea sp. MED297]
gi|88777160|gb|EAR08365.1| trigger factor [Reinekea sp. MED297]
Length = 437
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 92/447 (20%), Positives = 215/447 (48%), Gaps = 17/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + GL+R + V +P+ + ++ +++++ + I GFRPGKVP+S +K +G
Sbjct: 1 MQVSVETTTGLERRMTVGVPAAEVDNAVTQKLKETARRVRIDGFRPGKVPVSVVKQRFGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI +E ++++++ + L+ A P I + + D++ ++++
Sbjct: 61 SIRAEVLEDVVRNHYAQALTSEKITPAGSPQIEL---------SKDKAGEDVEFIATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +E++ FD + + E+ + ++D+ + + + + E ++ GD+V +D+
Sbjct: 112 FPDVELAGFDGFEFEKSKAEITDADVDKMLDNLRQQRANYVQVERAAKEGDRVKIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + S + +GS + + GLK GD+K +E FPED+ +DLAGK
Sbjct: 172 IDGEAFDGGSAEGQSVTLGSGQMIPGFESGIEGLKAGDEKPVELTFPEDYGNEDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL--GFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + EV +N + + + Q +++ + + K+K ++
Sbjct: 232 VFDIKVHEVAEAELPELNEEFFAAFGAEGKDLETFKTEVRQNMEREARTALEGKLKNTVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +LV++E + + + + Q + + + A+RRV
Sbjct: 292 DKLVEVNEIDVPSALVQDEIHRLKHQAVQQFGDQAQIDPHSL-----PDELFTEQAQRRV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + K I+ + +++ + Q + ++++D++ P L +++A + E
Sbjct: 347 KVGLIMNELINKAEIKADDAAVKAYIEDQASVY-QDPQQVIDYYNSNPEMLNQVKAVVVE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
+ IDHIL++ ++ + V++++ ++
Sbjct: 406 NAAIDHILENSKVAESVVSYEEAIKSN 432
>gi|218663471|ref|ZP_03519401.1| trigger factor [Rhizobium etli IE4771]
Length = 494
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 177/438 (40%), Positives = 283/438 (64%), Gaps = 1/438 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKRE+ V+IP+ + D N R+ D++ K I GFRPGKVP +H+K +YGK
Sbjct: 1 MQVIETLAEGLKREIKVVIPAKDMEDKMNARLADVKDKVRINGFRPGKVPAAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI++E ++EI++E ILS R E++A +P I + E + D ++ D + LSY++
Sbjct: 61 SIMAELVNEIVREQPSAILSSRGEKSATQPEIAMTE-DKDEADKILSAQQDFEFTLSYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ S ++VT+++ ++ + E++ Q+ ++A++ ++E K ++ GD+VT+DY
Sbjct: 120 LPPIELKSVKGIKVTREVIDISDDEVNEQVLKVAESARSYESKTGKAANGDRVTMDYVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + + ++GS + LVG+K G++K I FP D+ K+LAGK
Sbjct: 180 VDGEAFEGGTDQGAELVIGSGRFIPGFEDQLVGVKAGEEKTITVTFPADYPAKNLAGKDA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++K+V +P V +N++LA +LG ES ++ + +I+ L RQK+KRQILD
Sbjct: 240 TFDITVKDVAAPGAVEINDELASKLGIESADRLKEIVRGQIESQYGSLTRQKLKRQILDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y FD P SLV+ EYNGI +V +++ + + ++ D+ +E+ + Y LA+RRV
Sbjct: 300 LDEMYKFDTPASLVDAEYNGIWSQVNNDLAQSGKTFEDEDTTEEKAREEYKTLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTE+EMQ A+Y QL ++PG EK++L+ F+ P A A +RAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEDEMQRAIYDQLRQYPGQEKQILEFFRSQPGAAASIRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTF 438
VIDH+L + + D+KVT
Sbjct: 420 VIDHLLTEIDVTDKKVTK 437
>gi|90021254|ref|YP_527081.1| trigger factor [Saccharophagus degradans 2-40]
gi|119370932|sp|Q21KB0|TIG_SACD2 RecName: Full=Trigger factor; Short=TF
gi|89950854|gb|ABD80869.1| trigger factor [Saccharophagus degradans 2-40]
Length = 444
Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 93/454 (20%), Positives = 224/454 (49%), Gaps = 13/454 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + GL+R+L V IP++ + +R+++ I GFR GKVP+S ++ YG
Sbjct: 1 MQVSLETTTGLERKLTVGIPASVVDQEVAKRLKEAAKTVRINGFRKGKVPMSVVQQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + + I + + K R A +P+I + +E D++ ++++
Sbjct: 61 GVRQEVLGDAINRSFYDAVRKESLRPAGQPAIEPKQ---------LEPGKDIEFVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+S + ++VT+ EV + ++D + + K+ + + +S+ GD+V +D+ +
Sbjct: 112 YPEIEVSGLESIEVTRYNAEVTDADVDTMIETLQKSQADWAPVKRKSKKGDRVVIDFKGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + + ++GS + + ++G+K G+ + I+ FP+D+ + L G +
Sbjct: 172 KDGEAFEGGTAEGQTLVLGSNSMIPGFEKGIIGMKAGETETIKVTFPDDYQEESLRGAEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++++V ++++ + G E R + +++ + ++ K+K Q++
Sbjct: 232 EFEVTVQKVEGQKLPKLDDEFFAKFGVTEGGEEKFRADVRENMEREKQKALKGKLKEQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + T D+P+SLV E + + ++ +M +++ +D + A+RR
Sbjct: 292 NGLVAANTVDIPKSLVSGEIDALRNQMGNQMMQQYGSQAEGIDFKSILPDDMFKEQAERR 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+++ I + I V +E ++S + + H +++++++ L + A
Sbjct: 352 VALGLIVSEIVKNEKISVDKELVKSLIEDVASTY-EHPEEVVNYYYGNEQLLGGVEAAAL 410
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
E++V+ +L ++ D +++++ +++ + E
Sbjct: 411 EEQVVSLVLSKAKVSDETISYEEAVKPAAKQAEE 444
>gi|253990896|ref|YP_003042252.1| trigger factor [Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949]
gi|253782346|emb|CAQ85510.1| Trigger factor [Photorhabdus asymbiotica]
Length = 434
Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 88/447 (19%), Positives = 214/447 (47%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + +P+ + + + + ++ K I GFR GKVP++ IK YG
Sbjct: 1 MQVSVETTQGLGRRVTITVPAADIEKAVSSELVNVAKKVRIDGFRKGKVPMNIIKQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L + + ++++ + ++ A PS + + D + +++
Sbjct: 61 SVLQDVLGDLMQRNFINAIIEQKINPAGAPSYVPEQ---------FKDGEDFTFSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + EV ++++D + + K ++ E + D+VTVD+ S
Sbjct: 112 YPEVELKDLENIEVEKPVVEVKDEDVDAMLETLRKQQADWKETEEAASAEDRVTVDFNGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + + +VG K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKASDFVLAMGQGRMIPGFEDGIVGHKAGEELTIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G + +R + +++ + VR ++K Q++
Sbjct: 232 KFAITLKKVEQRELPELTEEFIKRFGITDGTVDGLRAEVRKNMERELKSAVRNRIKSQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP ++V+ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVKANEIEVPAAVVDGEIDVLRRQSAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + +++++ + K ++ +R E
Sbjct: 346 VVGLLLGEVISSNELKADEERVKGLIEEMASAY-EDPQEVIEFYGKNQELMSNVRNIALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ ++ +L ++ +++ +F++L + +
Sbjct: 405 EQAVEVLLGKAKVSEKETSFNELMNQN 431
>gi|261346365|ref|ZP_05974009.1| trigger factor [Providencia rustigianii DSM 4541]
gi|282565679|gb|EFB71214.1| trigger factor [Providencia rustigianii DSM 4541]
Length = 434
Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 91/446 (20%), Positives = 211/446 (47%), Gaps = 18/446 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + +P+ + + N + ++ K I GFR GKVP+ +K YG
Sbjct: 1 MQVSVETTQGLGRRVTITVPATDIEKALNSELVNVAKKVRIDGFRKGKVPMHIVKQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ + + ++++ + ++ A PS + E D + +++
Sbjct: 61 SVMQDVLGDVMQRNFINAIIEQKINPAGAPS---------YKPEMFEDGKDFVFSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ FD ++V + + V ++++D + + K ++ E + ++T++++ S
Sbjct: 112 YPEVELKGFDAIEVEKPVVTVKDEDLDNMLETLRKQQAQWKEVEDAATADSRITINFSGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ ++G + + +VG K G++ +IE FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAEDFALVMGEGRMIPGFEDGIVGHKAGEEFDIEVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + R G +R + +++ + +R ++K Q+L
Sbjct: 232 KFAIVLKKVEQRELPEFTEEFVKRFGIADGSVEGLRAEVRKNMERELKNAIRNRIKAQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N DVP ++V+ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVNANEIDVPAAVVDGEIDVLRRQAAQRFGG------NEKQAMELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
L G++LG + KN ++ EE +++ + + ++++++ K + +R E
Sbjct: 346 LVGLLLGEVINKNELKADEERVKALIEDMASAY-EDPSEVIEYYSKNEELMNSVRNLALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
++ ++ IL + ++ +++ F +L +
Sbjct: 405 EQAVETILAAAKVTEKETNFTELMNQ 430
>gi|118574081|sp|Q88KJ1|TIG_PSEPK RecName: Full=Trigger factor; Short=TF
Length = 437
Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 94/445 (21%), Positives = 214/445 (48%), Gaps = 19/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ + N+R++ +A I GFRPGKVP++ I+ +
Sbjct: 1 MQVSVENTSALERRMTIAVPAERVENEVNKRLQQTAKRAKIAGFRPGKVPMTVIRQRFEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E ++++ E + ++ A P++ E DL+ +++
Sbjct: 61 DARQEAFGDLVQASFYEAIVEQKLNPAGAPAVEPKS---------FEKGKDLEFVAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ + ++V + EV + ++D + + K N FE E ++ D+V +D+
Sbjct: 112 FPEFTVAGLESIKVERLSAEVADSDLDNMLEVLRKQNTRFEAVERAAQNDDQVNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD S K ++GS + E LVG K G+++ + FPED+ DLAGK
Sbjct: 172 VDGEAFAGGSAKGTLLVLGSGRMIPGFEEGLVGAKAGEERVVNVTFPEDYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +P+ +N + + G + + R + +++ ++ KVK Q++
Sbjct: 232 EFTITVNSVSAPVLPELNEEFFAQFGIKESTLEGFRAEVRKNMERELRQAIKTKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + ++ ++ + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPEQLPVELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ ++ + +++ + + + ++++ + K L E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFELKPDDAKVREMIEEMASAY-QEPEQVIAWYYKNDQQLNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
++V+D +L+ + D+ V++++
Sbjct: 404 EQVVDTVLQKATVTDKSVSYEEAVK 428
>gi|170751513|ref|YP_001757773.1| trigger factor [Methylobacterium radiotolerans JCM 2831]
gi|238688874|sp|B1LV84|TIG_METRJ RecName: Full=Trigger factor; Short=TF
gi|170658035|gb|ACB27090.1| trigger factor [Methylobacterium radiotolerans JCM 2831]
Length = 473
Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 130/474 (27%), Positives = 268/474 (56%), Gaps = 4/474 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E ++GLKRE V++ + L + + ++ K +KGFRPGKVP++H++ +YG+
Sbjct: 1 MQVTEINAQGLKREFQVLLAAQELEERLTNELSGMKDKVQLKGFRPGKVPVAHLRKVYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E + + E +I++ + A+ P + ++++ ++ DL +++ ++
Sbjct: 61 SVMAEVVQNAVNEANRQIVTDNGLKLALEPQVEFPTDQAEVEKA-LDAKGDLAFKVALEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
+P E++ D+ +T+ + + + E+D + +A + F +E E++ GD+VT+D+
Sbjct: 120 MPSFELADLSDVSLTKLVAKPSDAEVDEALDRMAGQSRPFTEREEGAEAQSGDRVTIDFV 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + + + +GS + LVG K GD++ ++ FPE + + LAGK
Sbjct: 180 GRIDGEEFQGGKGEGIDLELGSGSFIPGFEDQLVGAKVGDKRLVKVTFPESYGAEHLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ ++ + ++++ A +G ES +R S+ I + E R+++K+++L
Sbjct: 240 DAEFDVTVTKIQAAGEAKIDDEFAKSMGMESLEKLREAVSEAIGRDFEAASRRRLKKELL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + KY F++P SLV E+ + +V ++ + + ++ D+ +E+ Y +A+RRV
Sbjct: 300 DALDGKYAFELPPSLVAQEFAAVWAQVEQDLKTRGKTFEDEDTTEEKAQAEYRKIAERRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL +GE +I+V++EE+ AL ++ +FPG E+++ D ++K ALAELRAP+FE
Sbjct: 360 RLGLVLAQVGESADIKVSDEEVNQALIARVRQFPGQEQQVWDFYRKNAQALAELRAPLFE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS-ESSPEKLLDKSSKVETFQSEEAPSE 471
+KV+DH+L V++V+ V+ + LF + + + ++ + EA ++
Sbjct: 420 EKVVDHVLGQVKLVEEPVSKEALFADEDGDDTTGGKPADKAEAKDESKTEAKAD 473
>gi|92117753|ref|YP_577482.1| trigger factor [Nitrobacter hamburgensis X14]
gi|119370911|sp|Q1QL75|TIG_NITHX RecName: Full=Trigger factor; Short=TF
gi|91800647|gb|ABE63022.1| trigger factor [Nitrobacter hamburgensis X14]
Length = 453
Score = 261 bits (665), Expect = 2e-67, Method: Composition-based stats.
Identities = 141/454 (31%), Positives = 256/454 (56%), Gaps = 3/454 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGL+ E + IP+ +T + R+ D++ K + GFRPGKVP+SH+K +YG+
Sbjct: 1 MQVNETLAEGLRHEFQISIPAAEITAKADARLVDLKDKVKLDGFRPGKVPVSHLKKMYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ ETI++ I++ +I + R + A P +T+ +I + G DL ++ ++
Sbjct: 61 SVMIETIEDTIRDTNMQIATDRGFKLAGNPKVTMPSEVKEIEDI-LAGKSDLSYSVAIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
+P IE++ F + + + +V + ++D + IA N ++ + ++E GD+VT+ +
Sbjct: 120 VPAIELADFKTFSLEKPVVDVSDADVDEAIKRIADQNRSYSARAEGAKAENGDRVTISFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + E S +V ++GS L E LVG+ G+ + ++ FP ++ DLAGK
Sbjct: 180 GTIDGELFEAGSSDDVLVVLGSNALIPGFEEQLVGIGAGETRVVKTSFPSNYMENDLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +P + ++++ A LG E ++ + +++ +RQ +KR +L
Sbjct: 240 DAEFETKASLIEAPQDIKIDDEFAKLLGLEELDQLKQVVREQLSAEFARAMRQHLKRALL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + + FD P SLVE E+ + + V EM + + + ++ +E Y +A RRV
Sbjct: 300 DRLDDTHKFDAPPSLVEEEFEQVWKTVTTEMETNKKTFADENTTEEAARVEYRQIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL IGEKN I+VT++E+ A+ + + PG EK++ ++QK P ALA++RAP+FE
Sbjct: 360 RLSLVLSDIGEKNGIKVTDDEINRAVISRARQTPGREKEIWSYYQKNPQALAQVRAPLFE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
+KV+D IL+ + ++KVT + LF + S E
Sbjct: 420 NKVVDFILELATVTEKKVTREDLFKDHEAHSTEA 453
>gi|317492910|ref|ZP_07951334.1| hypothetical protein HMPREF0864_02098 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919032|gb|EFV40367.1| hypothetical protein HMPREF0864_02098 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 434
Score = 261 bits (665), Expect = 3e-67, Method: Composition-based stats.
Identities = 93/450 (20%), Positives = 207/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL R +++ + ++ + + N + ++ KA I GFR GKVP+ I YG
Sbjct: 1 MQVSVETTEGLGRRVNITVAADSIEKAVNSELVNVAKKARIDGFRKGKVPMHIISQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + K A P G + D + +++
Sbjct: 61 SVRQDVLGDLMQRNFVDAIIKEKLNPAGAPK---------YVPGEYKLGEDFSFAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ + ++V + + EV + ++D + + K + E E D+VTVD+T S
Sbjct: 112 YPEIELKDLESIEVEKPVVEVTDADVDAMLDTLRKQQATWAATERAVEAEDRVTVDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +G + E ++G K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEVFEGGKASDFVLAMGQGRMIPGFEEGILGHKAGEEFVIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +K+V + R G ++ + +++ + VR ++K Q++
Sbjct: 232 KFDIVLKKVEERELPEFTEEFIKRFGVADGSLDGLKAEVRKNMERELKGAVRNRIKSQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVKANDIDVPAALIDGEVDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + K ++ E+ +++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIAKKELKADEDRVKALIEEMASAY-EDPKEVIEFYSKNKELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L S ++ ++ F L + + +
Sbjct: 405 EQAVEALLASAKVSEKATNFSDLMNQTQAA 434
>gi|120610147|ref|YP_969825.1| trigger factor [Acidovorax citrulli AAC00-1]
gi|166229005|sp|A1TM63|TIG_ACIAC RecName: Full=Trigger factor; Short=TF
gi|120588611|gb|ABM32051.1| trigger factor [Acidovorax citrulli AAC00-1]
Length = 436
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 100/448 (22%), Positives = 210/448 (46%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + R++ + + GFRPGKVP++ + YG
Sbjct: 1 MAVTVETLEKLERKITLSLPLTAIQSEVDSRLKRLARTVKMDGFRPGKVPMNVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E + ++ + R A +P IT EG + + +++
Sbjct: 61 SVQYEVLNDKVGEAFAQAANEANLRVAGQPRITEKEGAPE---------GQVTFDAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P+++I V + +V + ID+ + + K F + +E GD+VTVD+
Sbjct: 112 FPEVKIGDLSTADVEKISADVTDAAIDKTIDILRKQRRTFAQRAQGTPAEDGDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D ++ QF+VG + E + + G+K G+ K FPED+ KD+AGK
Sbjct: 172 GKIDGETFSGGKAEDFQFLVGEGQMLKEFEDAVRGMKAGESKTFPLAFPEDYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K++ + VN LA LG + +R + +++ +F + + K+
Sbjct: 232 TADFLVTVKKIEAAHLPEVNEQLAKSLGIADGTVEGLRADIKKNLEREVKFRLLARNKQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+++ + +K D+P + V+ E +L+ R ++ K + E + A+R
Sbjct: 292 VMEALVSKAELDLPNASVQAEIARLLEGARADLKQRGIKDADKA---EIPEDVFRPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + NN+ T E++++ + + + + ++ + LAE+ A +
Sbjct: 349 RVRLGLVVAELVRANNLHATPEQLKAHVDELAASY-EKPEDVVRWYFGDRQRLAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDN 444
E+ V +L ++ ++ ++FD+L
Sbjct: 408 IENNVTAFVLDKAKVTEKAISFDELMGQ 435
>gi|157146947|ref|YP_001454266.1| trigger factor [Citrobacter koseri ATCC BAA-895]
gi|166229034|sp|A8AK17|TIG_CITK8 RecName: Full=Trigger factor; Short=TF
gi|157084152|gb|ABV13830.1| hypothetical protein CKO_02724 [Citrobacter koseri ATCC BAA-895]
Length = 432
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 88/448 (19%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFVDAIIKEKINPAGAPN---------YVPGEYKLGEDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E++ + ++V + + EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEVELTGLESIEVEKPVVEVTDADVDVMLDTLRKQQATWKDKDGAADAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTEEFIKRFGVEDGSVAGLRTEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPSALIDSEVDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTQELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKATSFNELMNQQA 432
>gi|326316316|ref|YP_004233988.1| trigger factor [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373152|gb|ADX45421.1| trigger factor [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 436
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 100/448 (22%), Positives = 211/448 (47%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + R++ + + GFRPGKVP++ + YG
Sbjct: 1 MAVTVETLEKLERKITLSLPLTAIQSEVDSRLKRLARTVKMDGFRPGKVPMNVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E + ++ + R A +P IT EG + + +++
Sbjct: 61 SVQYEVLNDKVGEAFAQAANEANLRVAGQPRITEKEGAPE---------GQVTFDAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P+++I +V + +V + ID+ + + K F + +E GD+VTVD+
Sbjct: 112 FPEVKIGDLSTAEVEKISADVTDAAIDKTIDILRKQRRTFAQRAQGTPAEDGDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D ++ QF+VG + E + + G+K G+ K FPED+ KD+AGK
Sbjct: 172 GKIDGETFSGGKAEDFQFLVGEGQMLKEFEDAVRGMKAGESKTFPLAFPEDYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K++ + VN LA LG + +R + +++ +F + + K+
Sbjct: 232 TADFLVTVKKIEAAHLPEVNEQLAKSLGIADGTVEGLRADIKKNLEREVKFRLLARNKQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+++ + +K D+P + V+ E +L+ R ++ K + E + A+R
Sbjct: 292 VMEALVSKAELDLPNASVQAEIARLLEGARADLKQRGIKDADKA---EIPEDVFRPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + N++ T E++++ + + + + ++ + LAE+ A +
Sbjct: 349 RVRLGLVVAELVRANDLHATPEQLKAHVDELAASY-EKPEDVVRWYFGDRQRLAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDN 444
E+ V +L ++ D+ ++FD+L
Sbjct: 408 IENNVTAFVLDKAKVTDKAISFDELMGQ 435
>gi|170720926|ref|YP_001748614.1| trigger factor [Pseudomonas putida W619]
gi|229558051|sp|B1J691|TIG_PSEPW RecName: Full=Trigger factor; Short=TF
gi|169758929|gb|ACA72245.1| trigger factor [Pseudomonas putida W619]
Length = 437
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 95/454 (20%), Positives = 216/454 (47%), Gaps = 19/454 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ + N+R++ +A + GFRPGKVP+S I+ +
Sbjct: 1 MQVSVENTSALERRMTIAVPAERVENEVNKRLQQTAKRAKVAGFRPGKVPMSVIRQRFEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E ++++ E + ++ A P++ E DL+ +++
Sbjct: 61 DARQEAFGDLVQASFYEAIVEQKLNPAGAPAVEPKS---------FEKGKDLEFVAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ + + V + EV + ++D + + K NV FE E +E D+V +D+
Sbjct: 112 FPEFAVAGLESISVERLSAEVTDADLDNMLEVLRKQNVRFEAVERAAEKDDQVNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S K Q ++GS + + LVG K G+++ + FPED+ DLAGK
Sbjct: 172 IDGEAFAGGSAKGTQLVLGSGRMIPGFEDGLVGAKAGEERVVNVTFPEDYQNLDLAGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V +P +N + + G + + R + +++ ++ KVK Q++
Sbjct: 232 EFTITVNSVSAPQLPELNEEFFAQFGIKESTLEGFRAEVRKNMERELRQAIKTKVKNQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++L+ENE N + + + ++ + + AKRRV
Sbjct: 292 DGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPEQLPAELFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++ + ++ ++ E +++ + + + ++++ + K + E+R+ + E
Sbjct: 345 VLGLIVAEVVKQFELKPDEGKVREMIEEMASAY-QEPEQVIAWYLKNDQQMNEVRSVVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
++V+D +L+ + D+ V++++ + + +
Sbjct: 404 EQVVDTVLQKATVTDKSVSYEEAVKPAQAPAEAE 437
>gi|146310564|ref|YP_001175638.1| trigger factor [Enterobacter sp. 638]
gi|166988051|sp|A4W7A7|TIG_ENT38 RecName: Full=Trigger factor; Short=TF
gi|145317440|gb|ABP59587.1| trigger factor [Enterobacter sp. 638]
Length = 432
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 87/448 (19%), Positives = 204/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGELMSRNFIDAIIKEKINPAGAPN---------YVPGEYKQGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + EV + ++D + + K ++ K+ + D+VT+D++ S
Sbjct: 112 YPEVELKGLETIEVEKPVVEVTDADVDGMLDTLRKQQANWKDKDGAVDAEDRVTIDFSGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ VR +VK Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELNGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 DGLVKANEIDVPAALIDSEIDVLRRQAAQRFGG------NQQQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ +E ++ + + + +++ + + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADDERVKGLIEEMASAY-EDPSEVVQFYGSNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVSEKATSFNELMNQQA 432
>gi|283784262|ref|YP_003364127.1| trigger factor [Citrobacter rodentium ICC168]
gi|282947716|emb|CBG87271.1| trigger factor [Citrobacter rodentium ICC168]
Length = 432
Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats.
Identities = 89/448 (19%), Positives = 210/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFVDAIIKEKINPAGAPT---------YVPGEYKQGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E++ + ++V + + EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEVELTGLEAIEVEKPVVEVTDADVDVMLDTLRKQQATWKDKDGAADAEDRVTLDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR ++K Q +
Sbjct: 232 KFAINLKKVEERELPELTEEFIKRFGVEDGSVAGLRTEVRKNMERELKGAVRNRIKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPSALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKATTFNELMNQQA 432
>gi|157962503|ref|YP_001502537.1| trigger factor [Shewanella pealeana ATCC 700345]
gi|189035956|sp|A8H615|TIG_SHEPA RecName: Full=Trigger factor; Short=TF
gi|157847503|gb|ABV88002.1| trigger factor [Shewanella pealeana ATCC 700345]
Length = 434
Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats.
Identities = 95/448 (21%), Positives = 206/448 (45%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ ++ E ++ +A I GFRPGKVP+S I YG
Sbjct: 1 MQVSVETTQGLERRLTISVPAEQIENTVKEALKSEAKRARIPGFRPGKVPVSVINKRYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + + E+++ E + A P++T + + +++I
Sbjct: 61 AIRQDIMGEVMQRNFVEAIIAEKLNPAGAPTLTPGST----------EGENFEFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + + V Q EV E ++D + + + FEV + + GDK +++ S
Sbjct: 111 YPEVELKGLESITVEQPTAEVTEADVDAMIETLRNQHATFEVADRAAAEGDKAKINFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + +GS + + G K G++ IE FPED+ ++L GK
Sbjct: 171 IDGEEFEGGKADDFELQLGSGRMIPGFESGVEGHKAGEEFNIEVTFPEDYHAENLKGKVA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ EV + VN++ A G A+R S+ + + E ++ VK Q+L
Sbjct: 231 TFAITLNEVQAANLPEVNDEFATLFGITEGGIDALRAEISKNMSRELEQALKANVKEQVL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + ++P +L+ E + ++ ++ E + A RRV
Sbjct: 291 NGLVEQNDIELPTALINGEVEVLRKQAMQRFGDQ------AANMPELPADLFTEQAARRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E +Q + + +++ ++ + +R E
Sbjct: 345 KVGLLLGEVIKTNELKAEDERVQGLIASMASAY-EDPSEVVAYYNGNEELMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LK+ + ++ V F++ + ++
Sbjct: 404 EQAVEALLKTATLTEKAVNFEEFMNKAT 431
>gi|329850557|ref|ZP_08265402.1| trigger factor [Asticcacaulis biprosthecum C19]
gi|328840872|gb|EGF90443.1| trigger factor [Asticcacaulis biprosthecum C19]
Length = 450
Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats.
Identities = 133/454 (29%), Positives = 244/454 (53%), Gaps = 10/454 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV+EK +EGL R L+V I ++LT + +I +I K NIKGFRPGKVP H++ +YGK
Sbjct: 1 MQVVEKLNEGLSRVLEVTIAKDQLTLKLDAKIAEIAPKMNIKGFRPGKVPQGHVRKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++SE + E + E + L + R A +P +T +I+G DL ++ ++
Sbjct: 61 ELMSEIVQETLNETTQKALDQASIRPASQPELTP----IGDIEQVIKGNSDLAYSIAVEM 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE------VKETESEIGDKVT 174
+P +++T+ + + +ID + + +E ++E GDK+
Sbjct: 117 MPIFTPVEPASIELTRPVYTPSDADIDEALKNVVSQTKQYEAKAGKGKAAPKAEDGDKLI 176
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+D+ + + E S ++ + ++GS E LVG K G+ K + FPE++ K+
Sbjct: 177 IDFVGKIGDEAFEGGSAEDAELVIGSGQFIPGFEEQLVGAKKGETKTLNVTFPENYGAKN 236
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
LAGK+ ++K++ + +++LA LG ES A++ + +++Q R K+K
Sbjct: 237 LAGKEATFETTVKDILAAKEGEADDELAKTLGLESLDALKNILKTQLEQQFNSASRFKMK 296
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
R +LD + K+ F++P ++E E+ GI +V + ++ ++ +E+ Y +A
Sbjct: 297 RALLDVLDEKHDFELPSRMLEAEFQGIWGQVEQDKANGQLSEEDAAKSEEDLKAEYRKIA 356
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+RRV G+VL IG + N++VT++E+ A+ Q+ +PG E+++ D ++ P A A++RA
Sbjct: 357 ERRVRLGLVLAEIGTRQNVQVTDQEVTQAIMQEARNYPGQERQVFDFYRNNPAAAAQIRA 416
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
PI+E+KV D I + D ++ + L E+
Sbjct: 417 PIYEEKVCDLIFTLATVTDSPISKEDLLKEDDEA 450
>gi|284006420|emb|CBA71656.1| Trigger factor [Arsenophonus nasoniae]
Length = 434
Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats.
Identities = 81/447 (18%), Positives = 212/447 (47%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + +P+ + + N + ++ K I GFR GKVP++ +K YG
Sbjct: 1 MQVSVETTQGLGRRVTITVPNADIEKAVNSELINVAKKVRIDGFRKGKVPMNIVKQRYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L + + ++++ + ++ A P + + D + +++
Sbjct: 61 SVLQDVLGDLMQRNFVSAIIEQKINPAGAPKYQPEQ---------FKTGEDFTYTVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I++ ++++V + I V ++++D + + K ++ + + +VT+D+ +
Sbjct: 112 YPEIDLKGLENIKVEKPIVAVKDQDVDIMLETLRKQQATWQETKEKVGADSRVTIDFKGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + ++ ++G + + ++G + G++ I+ FP D+ ++L GK
Sbjct: 172 IDGEAFEGGNARDFVLVMGEGRMIPGFEDGIMGHQAGEEFTIDVNFPADYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++++V + + + + G ++R + +++ + VR ++K Q+L
Sbjct: 232 NFAITLQKVEQRILPELTEEFIKQFGVPDGSMESLRAEVRKNMERELKTAVRNRIKTQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +VP ++V++E N + ++ N E + + AK RV
Sbjct: 292 DGLVKENEIEVPTAVVDSEINVLRRQAAQRFGG------NEKQALELPREIFEEQAKHRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + KN++ + ++S + + ++++++ K + +R E
Sbjct: 346 IVGLLLGEVINKNSLTADDARVKSLIEDMASAY-EDPSEVIEYYSKNKELMDSVRNLALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ I+ +L+ ++ D++ F +L + +
Sbjct: 405 EQAIEILLEKAEVTDKETQFQELMNQA 431
>gi|218549896|ref|YP_002383687.1| trigger factor [Escherichia fergusonii ATCC 35469]
gi|226695528|sp|B7LME3|TIG_ESCF3 RecName: Full=Trigger factor; Short=TF
gi|218357437|emb|CAQ90076.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
fergusonii ATCC 35469]
gi|324114663|gb|EGC08631.1| hypothetical protein ERIG_00657 [Escherichia fergusonii B253]
Length = 432
Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRHFIDAIIKEKINPAGAPN---------YVPGEYKPGEDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ + ++V + I EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEIELKDLETIEVEKPIVEVTDADVDMMLDTLRKQQATWKEKDGAADAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + D R G E +R + +++ + VR +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTEDFIKRFGVEDGSVEGLRAEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|319794079|ref|YP_004155719.1| trigger factor [Variovorax paradoxus EPS]
gi|315596542|gb|ADU37608.1| trigger factor [Variovorax paradoxus EPS]
Length = 439
Score = 260 bits (663), Expect = 4e-67, Method: Composition-based stats.
Identities = 100/451 (22%), Positives = 216/451 (47%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + + R++ + + GFRPGKVP++ + YG
Sbjct: 1 MTVTVETLEKLERKITLTLPVGTIQNEVDSRLKKLARTVKMDGFRPGKVPMNVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E + ++ R A +P IT E + +L +++
Sbjct: 61 SVHYEVMNDKVGEAFSQAANEAKLRVAGQPRITEKEESPE---------GELAFDAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETE--SEIGDKVTVDYT 178
P+++I+ +V + EV + ID+ + + K F + + ++ D+VTVD+
Sbjct: 112 FPEVKINDLSGAEVEKLSAEVGDDAIDKTLDILRKQRRTFAQRAQDAVAQDDDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + ++ QF+VG + E + + G+K+GD + FP D+ KD+AGK
Sbjct: 172 GKIDGEPFQGGKAEDFQFVVGEGQMLKEFEDAVRGMKSGDSRTFPLSFPADYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++K++ + VN LA LG + +R + +++ +F + + K
Sbjct: 232 QADFMVTVKKIEASHLPEVNEQLAKSLGIAEATVEGLRADIKRNLEREVKFRLLARNKNA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + D+P + V++E + +++ R E+ K + I E + + A+R
Sbjct: 292 VMDALVANAELDLPNASVQSEVSRMIEGARAELKQRGIKDADKAPIPE---EVFRPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + N ++ E++++ + + + ++ + N LAE+ A +
Sbjct: 349 RVRLGLVVAELVRANELQAKPEQIKAHIDELAASY-EKPADVVRWYFSDNNRLAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
E+ V D +L ++ ++ V+FD+L +
Sbjct: 408 IENNVTDFVLGKAKVNEKSVSFDELMAQQQQ 438
>gi|197105163|ref|YP_002130540.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Phenylobacterium zucineum HLK1]
gi|196478583|gb|ACG78111.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Phenylobacterium zucineum HLK1]
Length = 454
Score = 260 bits (663), Expect = 5e-67, Method: Composition-based stats.
Identities = 147/449 (32%), Positives = 240/449 (53%), Gaps = 7/449 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV+EK EGL R V +P L D RI +I NIKGFRPGKVP +H+K LYGK
Sbjct: 3 MQVVEKSGEGLSRVYGVTVPVKDLNDRLEARIAEITPTLNIKGFRPGKVPPAHVKRLYGK 62
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++SE ++ + E ++L R A P + G+I+G DL +S D+
Sbjct: 63 QLMSEVLEATLSETTQKVLEDNKLRPAGEPELKPEGDLQ----GVIDGKADLAYEISVDL 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---EIGDKVTVDY 177
+P+ E L +T+ + E + E+D + E+AK N +E K ++ + GD V +D+
Sbjct: 119 MPEFEPVDPATLSLTRPVYEPTDAEVDEAVEELAKQNRTYETKTGKTVKAKDGDMVVIDF 178
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D E S +V+ ++GS + LVG K E++ FP D+ +LAG
Sbjct: 179 VGRIDGEAFEGGSATDVELVLGSGQFIPGFEDQLVGAKPDSDVEVKVTFPADYQAANLAG 238
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K+ +KEV +P ++ A RLG E+ ++ L ++Q R K+KR +
Sbjct: 239 KEAVFETKVKEVKAPAESKADDAFAERLGVENLEKLKELLKTNLEQQYAGASRFKLKRAL 298
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + +K+ F +P +VE E+ I +V+ + + N + DE+ Y +A+RR
Sbjct: 299 LDELDSKHDFPLPPKMVEAEFASIWSQVQQDKEAGNLPEDDAKKSDEQLESEYRKIAERR 358
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL IG NN++VT++E+ A+ ++ ++ +++ + ++ PNA A+LRAPIF
Sbjct: 359 VRLGLVLAEIGRANNVQVTDQELGEAIRREAIKYGPQAQQVFELLRQNPNAQAQLRAPIF 418
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
EDKV+D I++ ++ D+KV D+L
Sbjct: 419 EDKVVDLIVEKAKVEDKKVDKDELLKEDD 447
>gi|239815492|ref|YP_002944402.1| trigger factor [Variovorax paradoxus S110]
gi|259533668|sp|C5CJT3|TIG_VARPS RecName: Full=Trigger factor; Short=TF
gi|239802069|gb|ACS19136.1| trigger factor [Variovorax paradoxus S110]
Length = 437
Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats.
Identities = 103/449 (22%), Positives = 213/449 (47%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + R++ + + GFRPGKVP++ + YG
Sbjct: 1 MTVTVETLEKLERKITLTLPVGTIQSEVDSRLKKLARTVKMDGFRPGKVPMNVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E + ++ R A +P IT E + L +++
Sbjct: 61 SVHYEVMNDKVGEAFSQAANEAKLRVAGQPRITEKEESPE---------GQLAFDAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETE--SEIGDKVTVDYT 178
P+++I+ + +V + EV E ID+ + + K F + + ++ D+VTVD+
Sbjct: 112 FPEVKINDLSNAEVEKLSAEVGEDAIDKTLDILRKQRRTFAQRAQDAVAQDDDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D ++ QFIVG + E + + G+K GD + FP D+ KD+AGK
Sbjct: 172 GKIDGEPFPGGKAEDFQFIVGEGQMLKEFEDAVRGMKAGDSRTFPLSFPADYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++K++ + VN LA LG + +R + +++ +F + + K
Sbjct: 232 QADFMVTVKKIEASHLPEVNEQLAKSLGIAEATVEGLRADIKKNLEREVKFRLLARNKNA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + D+P + V++E N +++ R E+ K + I + + + A+R
Sbjct: 292 VMDTLVANAELDLPNASVQSEVNRMVEGARAELKQRGIKDADKAPIPD---EVFRPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + NN++ E++++ + + + ++ + N LAE+ A +
Sbjct: 349 RVRLGLVVAELVRANNLQAKPEQIKAHIDELAASY-EKPADVVRWYFSDNNRLAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V D +L ++ ++ V+FD+L
Sbjct: 408 IENNVTDFVLGKAKVKEKSVSFDELMAQQ 436
>gi|167624687|ref|YP_001674981.1| trigger factor [Shewanella halifaxensis HAW-EB4]
gi|189035955|sp|B0TLV0|TIG_SHEHH RecName: Full=Trigger factor; Short=TF
gi|167354709|gb|ABZ77322.1| trigger factor [Shewanella halifaxensis HAW-EB4]
Length = 434
Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 207/448 (46%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ ++ E ++ +A I GFRPGKVP+S I YG
Sbjct: 1 MQVSVETTQGLERRLTISVPAEQIENTVKEALKSEAKRARIPGFRPGKVPVSVINKRYGN 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + E+++ E + A P+ T + + +++I
Sbjct: 61 AIRQDITGEVMQRNFIEAIIAEKLNPAGAPTFTPGST----------EGENFEFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + + V Q EV E ++D + + + FEV E + GDK +++ S
Sbjct: 111 YPEVELKGLESITVEQPTAEVTEADVDSMIETLRNQHATFEVAERAAAEGDKAKINFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + +GS + + G K G++ IE FPED+ ++L GK
Sbjct: 171 IDGEEFEGGKADDFELQLGSGRMIPGFESGVEGHKAGEEFNIEVTFPEDYHAENLKGKVA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ EV + VN++ A G A+RG S+ + + E ++ VK Q+L
Sbjct: 231 TFAITLNEVQAANLPEVNDEFATLFGITEGGIDALRGEISKNMSRELEQALKANVKEQVL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + ++P +L++ E + ++ ++ E + A RRV
Sbjct: 291 NGLVEQNDIELPAALIDGEVEVLRKQAMQRFGDQ------AANMPELPADLFTEQAARRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E +Q+ + + +++ ++ + +R E
Sbjct: 345 KVGLLLGEVIKANELKAEDERVQALIASMASAY-EDPSEVVAYYNGNEELMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LK+ + ++ V F++ + ++
Sbjct: 404 EQAVEALLKTATLTEKAVNFEEFMNKAT 431
>gi|212709196|ref|ZP_03317324.1| hypothetical protein PROVALCAL_00229 [Providencia alcalifaciens DSM
30120]
gi|212688108|gb|EEB47636.1| hypothetical protein PROVALCAL_00229 [Providencia alcalifaciens DSM
30120]
Length = 434
Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats.
Identities = 90/446 (20%), Positives = 209/446 (46%), Gaps = 18/446 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + +P+ + + N + ++ K + GFR GKVP+ +K YG
Sbjct: 1 MQVSVETTQGLGRRVTITVPATDIEKALNSELVNVAKKVRVDGFRKGKVPMHIVKQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ + + ++++ + ++ A PS + E D + +++
Sbjct: 61 SVMQDVLGDVMQRNFINAIIEQKINPAGAPS---------YKPEMFEDGKDFVYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ F+ ++V + V ++++D + + K ++ E + ++T+++T S
Sbjct: 112 YPEIELKGFETIEVEKPAVTVKDEDLDNMLETLRKQQAQWKEVEDAATADSRITINFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ ++G + E +VG K G++ +IE FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAEDFALVMGEGRMIPGFEEGVVGHKAGEEFDIEVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + R G +R + +++ + VR +VK Q+L
Sbjct: 232 KFAIVLKKVEQRELPEFTEEFVKRFGIADGSVDGLRAEVRKNMERELKNAVRNRVKAQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N +VP ++V+ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVNANEIEVPAAVVDGEIDVLRRQAAQRFGG------NEKQAMELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ E+ +++ + + ++++++ K + +R E
Sbjct: 346 IVGLLLGEVIRTNELKADEDRVKALIEDMASAY-EDPSEVIEYYSKNEELMNSVRNLALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
++ ++ IL + ++ +++ F +L +
Sbjct: 405 EQAVETILAAAKVTEKETNFTELMNQ 430
>gi|88860443|ref|ZP_01135081.1| trigger factor [Pseudoalteromonas tunicata D2]
gi|88817641|gb|EAR27458.1| trigger factor [Pseudoalteromonas tunicata D2]
Length = 434
Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats.
Identities = 87/450 (19%), Positives = 209/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ + +R++ + I GFRPGKVP+S I YG
Sbjct: 1 MQVSVETTQGLERRLTITVPAANIDSEVKKRLQQLSRTQRIDGFRPGKVPVSIINKRYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E E+++ E + A P+ G ++ DL+ ++++
Sbjct: 61 AVRQEVAGELMQRKYYEAVIAEKLNPAGAPTF---------APGALDAGKDLEFVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + + V + + EV + ++ + + + K + + + + G++VT+D+ +
Sbjct: 112 FPEVELKDLEKINVEKPVVEVTDADLAKMLETLRKQHATWADSDAVAAEGNRVTIDFVGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + + ++G K G+ + FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKAEAFPLELGQGRMIPGFEDNILGKKAGEVVVADVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++++V +N++ A G A++ + + + E ++ KVK Q++
Sbjct: 232 QFTITVQKVEVQQLPELNDEFATLFGVAEGGVDALKAEVKRNMTRELEQAIKGKVKEQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ D P +LV E + + Q+ N ++ E + +H A +RV
Sbjct: 292 AGLLETNQVDAPSALVSQEIDALRQQAVQRFGG------NAQNMPELPAELFHEQAAKRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
TG++LG + + N I+V + ++++ + + +++++++ + +++ E
Sbjct: 346 KTGLLLGQVIKANEIKVDDAKVEALIATVASAY-EDPTEVVEYYKSNAQLMQQMQNVAME 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ I+ IL + + + FD++ + +
Sbjct: 405 EQAIEAILANATVAEVTAAFDEIMNPQAAQ 434
>gi|325498273|gb|EGC96132.1| trigger factor [Escherichia fergusonii ECD227]
Length = 432
Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats.
Identities = 92/448 (20%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRHFIDAIIKEKINPAGAPN---------YVPGEYKPGEDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ + ++V + I EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEIELKDLETIEVEKPIVEVTDADVDMMLDTLRKQQATWKEKDGAADAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + VR +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTEEFIKRFGVEDGSVEGLRAEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|237730413|ref|ZP_04560894.1| trigger factor [Citrobacter sp. 30_2]
gi|226905952|gb|EEH91870.1| trigger factor [Citrobacter sp. 30_2]
Length = 432
Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats.
Identities = 89/448 (19%), Positives = 210/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFVDAIIKEKINPAGAPN---------YVPGEYKLGEDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E++ + ++V + + EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEVELTGLEAIEVEKPVVEVTDADVDVMLDTLRKQQATWKDKDGAADAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGVKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ E+ ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEDRVKGLIEEMASAY-EDPKEVVEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKATSFNELMNQQA 432
>gi|62179059|ref|YP_215476.1| trigger factor [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|224582285|ref|YP_002636083.1| trigger factor [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|75484572|sp|Q57SB6|TIG_SALCH RecName: Full=Trigger factor; Short=TF
gi|254789018|sp|C0Q7X2|TIG_SALPC RecName: Full=Trigger factor; Short=TF
gi|62126692|gb|AAX64395.1| peptidyl-prolyl cis/trans isomerase, trigger factor; a molecular
chaperone involved in cell division [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|224466812|gb|ACN44642.1| trigger factor [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322713520|gb|EFZ05091.1| trigger factor [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 432
Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats.
Identities = 89/448 (19%), Positives = 210/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFVDAIIKEKINPAGAPN---------YVPGEYKVGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E++ + ++V + + EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEVELTGLESIEVEKPVVEVTDADVDVMLDTLRKQQATWKEKDGAADAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLAMGQGRMIPGFEDGVKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFVINLKKVEERGLPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVSEKATSFNELMNQQA 432
>gi|209549106|ref|YP_002281023.1| trigger factor [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|226738687|sp|B5ZMH5|TIG_RHILW RecName: Full=Trigger factor; Short=TF
gi|209534862|gb|ACI54797.1| trigger factor [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 495
Score = 259 bits (661), Expect = 7e-67, Method: Composition-based stats.
Identities = 178/438 (40%), Positives = 284/438 (64%), Gaps = 1/438 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKRE+ V+IP+ + D NER+ D++ K I GFRPGKVP +H+K +YGK
Sbjct: 1 MQVIETLAEGLKREIKVVIPAKDMQDKMNERLADVKDKVRINGFRPGKVPAAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI++E ++EI++E ILS R E++A +P I + E + D ++ D + LSY++
Sbjct: 61 SIMAELVNEIVREQPSAILSSRGEKSATQPEIAMTE-DKDEADKILAAEQDFEFTLSYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ S ++VT+++ ++ + E+ Q+ ++A++ A+E K ++ GD++T+DY
Sbjct: 120 LPPIELKSVKGIKVTREVIDISDDEVTEQVLKVAESARAYETKTGKAANGDRITMDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + + ++GS + LVG+K GD+K I FP D+ K+LAGK+
Sbjct: 180 VDGEAFEGGTDQGAELVLGSGRFIPGFEDQLVGVKAGDEKTITVTFPADYPAKNLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ S+K+V +P V +N++LA +LG ES ++ + +I+ L RQK+KRQILD
Sbjct: 240 TFDVSVKDVAAPGAVEINDELASKLGIESADRLKEIVRGQIESQYGSLTRQKLKRQILDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P SLV+ EYNGI +V +++ + + ++ ++ +E+ + Y LA+RRV
Sbjct: 300 LDEMYKFETPTSLVDAEYNGIWSQVNNDLAQSGKTFEDEETTEEKAREEYKTLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTE+EMQ A+Y QL ++PG EK++L+ F+ P A A +RAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEDEMQRAIYDQLRQYPGQEKQILEFFRSQPGAAASIRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTF 438
VIDH+L + + D+KVT
Sbjct: 420 VIDHLLTEIDVTDKKVTK 437
>gi|163751868|ref|ZP_02159082.1| trigger factor [Shewanella benthica KT99]
gi|161328218|gb|EDP99382.1| trigger factor [Shewanella benthica KT99]
Length = 434
Score = 259 bits (660), Expect = 8e-67, Method: Composition-based stats.
Identities = 103/450 (22%), Positives = 215/450 (47%), Gaps = 19/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + N ++ KA + GFRPGKVP+S I YGK
Sbjct: 1 MQVSVETTQGLERRLTISVPAEQIEKTVNAALKSEAKKARLPGFRPGKVPVSVINKRYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + E+++ E + A P+ E +D + + +++I
Sbjct: 61 AIRQDITGEVMQRNFVEAIVAEKLNPAGAPTFIPGESNTD----------NFQFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D + V Q EV + ++D + + K + F E E+ GDK +D+ S
Sbjct: 111 YPEVELKGLDAIVVEQPTAEVTDTDVDAMIETLRKQHATFAAVEREAADGDKAMIDFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E +N + +GS + + G K G++ +IE FPED+ ++L GK
Sbjct: 171 VDGEEFEGGKSENFELQLGSGRMIPGFESGVEGHKAGEEFDIEVTFPEDYHAENLKGKVA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ S+ + + E ++ VK Q+L
Sbjct: 231 KFVITLNEVQAANLPEVNDEFAKLFGVTEGGLEALKAEISKNMGRELEQALKASVKEQVL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +P+SL++ E + ++ ++ E + A+RRV
Sbjct: 291 KGLLEQNEISLPKSLIDGEVEVLRKQAMQRFGDQ------ATNMPELPADLFTEQAERRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E +Q+ + + ++++H++ + +R E
Sbjct: 345 RVGLLLGEVIKTNELKAEDERVQALIASMASAY-EDPSEVVEHYKDNQEMMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +LK+ ++ ++ V F++ + S++
Sbjct: 404 EQAVESLLKTAKVTEKSVNFEEFMNKSTQQ 433
>gi|283834245|ref|ZP_06353986.1| trigger factor [Citrobacter youngae ATCC 29220]
gi|291069765|gb|EFE07874.1| trigger factor [Citrobacter youngae ATCC 29220]
Length = 432
Score = 259 bits (660), Expect = 8e-67, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 210/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFVDAIIKEKINPAGAPN---------YVPGEYKLGEDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E++ + ++V + + EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEVELTGLEAIEVEKPVVEVTDADVDVMLDTLRKQQATWKDKDGAADAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGVKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVVEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKATSFNELMNQQA 432
>gi|90410781|ref|ZP_01218796.1| trigger factor [Photobacterium profundum 3TCK]
gi|90328412|gb|EAS44710.1| trigger factor [Photobacterium profundum 3TCK]
Length = 433
Score = 259 bits (660), Expect = 8e-67, Method: Composition-based stats.
Identities = 86/449 (19%), Positives = 208/449 (46%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL+R L + +P+ + ++ ++ I GFRPGK P+ + ++G
Sbjct: 1 MQVTVETTEGLERHLTITVPAANIENAVTAELKKIAKNRRFDGFRPGKAPMKMVARMFGG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E+++ E + K A P+ T + I DL + S+++
Sbjct: 61 SVRQDILGEVMQRHFIEAIVKEKINPAGAPTFTPVD---------IAEGKDLVFKASFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I ++ D + V + EV ++++ + + K + + +E +VT+D+ S
Sbjct: 112 FPEIALAGLDKIAVEKPAVEVKDEDVTNMLDTLRKQQATWSDVDAAAEADSRVTIDFIGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +G + + +VG K G++ +E FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKADGFALAMGQNRMIPGFEDGIVGKKAGEEFTLEVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +V + + + + G ++ + +++ + V+ ++K Q+L
Sbjct: 232 SFAITLHKVEAQELPELTEEFIAKFGVLDGSIDGLKTEVRKNMERELKQAVKGRIKEQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +VP +L++ E N + Q+ + + E + + AKRRV
Sbjct: 292 DGLVEQNDINVPAALIDQEINVLRQQAAQRFGG------DAKNTPELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++G + + ++ E+ +++ + + + +++ ++++ ++ +R E
Sbjct: 346 VVGLLIGEVIKTEELKADEDRVKAIIAEMASAY-EDPTEVVSYYEQNEKMMSNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ ID +L Q+ +++V F+ L + +
Sbjct: 405 EQAIDALLAKAQVTEKEVGFNDLMNQPAA 433
>gi|127513437|ref|YP_001094634.1| trigger factor [Shewanella loihica PV-4]
gi|166229936|sp|A3QFX7|TIG_SHELP RecName: Full=Trigger factor; Short=TF
gi|126638732|gb|ABO24375.1| trigger factor [Shewanella loihica PV-4]
Length = 434
Score = 259 bits (660), Expect = 8e-67, Method: Composition-based stats.
Identities = 99/448 (22%), Positives = 219/448 (48%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + ++ +++ +A I GFRPGKVP+S I YGK
Sbjct: 1 MQVSVETTQGLERRLTISVPAEQIEKAVSDSLKNEAKRARIPGFRPGKVPVSVINKRYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I E E+++ E + A P+ E + + +++I
Sbjct: 61 AIRQEITGEVMQRNFIEAIIAEKLNPAGAPTFVPGET----------DAENFQFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V Q EV + ++D + + K + FE E E+ GDK +D+ S
Sbjct: 111 YPEVELKGLDAIEVEQPTAEVTDADVDAMIETLRKQHATFEAVEREAAEGDKAKIDFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ + +GS + + G K G+ +I+ FPED+ ++L GK
Sbjct: 171 IDGEEFEGGKAEDFELQLGSGRMIPGFESGVEGHKAGEAFDIDVTFPEDYHAENLKGKVA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++KEV + VN++ A G A++ + + + E ++ VK Q+L
Sbjct: 231 KFAITLKEVQAANLPEVNDEFAKLFGVADGGLEALKVEIRKNMSRELEQALKANVKDQVL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + ++P++L++ E N + Q+ + ++ E + A+RRV
Sbjct: 291 NGLLEQNEIELPKALIDGEVNVLRQQAMQRFGNQ------AANMPELPADLFTEQAERRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E +Q+ + + +++++++ + +R E
Sbjct: 345 KVGLLLGEVIKTNELKADDERVQALIASMASAY-EDPQEVIEYYNNNQEMMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LK+ ++ ++ V F++ + ++
Sbjct: 404 EQAVEALLKTAKVTEKAVQFEEFMNKAT 431
>gi|183601060|ref|ZP_02962553.1| hypothetical protein PROSTU_04682 [Providencia stuartii ATCC 25827]
gi|188019399|gb|EDU57439.1| hypothetical protein PROSTU_04682 [Providencia stuartii ATCC 25827]
Length = 434
Score = 259 bits (660), Expect = 9e-67, Method: Composition-based stats.
Identities = 84/446 (18%), Positives = 212/446 (47%), Gaps = 18/446 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + +P+ + + N + ++ K + GFR GKVP++ +K YG
Sbjct: 1 MQVSVETTQGLGRRVTITVPAADIEKAVNSELVNVAKKVRVDGFRKGKVPMNIVKQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ + + ++++ + ++ A PS ++E D + +++
Sbjct: 61 SVMQDVLGDVMQRNFINAIIEQKINPAGAPS---------YKPEMLEDGKDFVYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ + ++V + + V +++++ + + K ++ + ++T+++T S
Sbjct: 112 YPEIELKGLETIEVEKPVVSVKDEDLENMLETLRKQQAQWKEVSEAATADSRITINFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ ++G + + +VG K G++ +IE FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAEDFALVMGEGRMIPGFEDGIVGHKAGEEFDIEVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + R G + +R + +++ + VR ++K Q+L
Sbjct: 232 KFAIVLKKVEQRELPEFTEEFIKRFGIVDGTLEGLRAEVRKNMERELKNAVRNRIKAQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N +VP ++V+ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVNANEIEVPAAVVDGEIDVLRRQAAQRFGG------NEKQAMELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ E+ +++ + + + ++++++ K + +R E
Sbjct: 346 VIGLLLGEVISANELKADEDRVKALIEEMASAY-EDPAEVIEYYSKNNELMNSVRNLALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
++ ++ +L+ ++ +++ F +L +
Sbjct: 405 EQAVEKVLEVAKVTEKETNFTELMNQ 430
>gi|261341037|ref|ZP_05968895.1| trigger factor [Enterobacter cancerogenus ATCC 35316]
gi|288316902|gb|EFC55840.1| trigger factor [Enterobacter cancerogenus ATCC 35316]
Length = 432
Score = 259 bits (660), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/448 (19%), Positives = 205/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGELMSRNFIDAIIKEKINPAGAPN---------YVPGEYKMGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I V ++++D + + K ++ KE + D+VT+D+T S
Sbjct: 112 YPEVELKGLESIEVEKPIVSVTDEDVDGMLDTLRKQQANWKDKEGAVDAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E + +R + +++ VR +VK Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSIAGLRAEVRKNMERELNGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANEIDVPAALIDGEIDVLRRQAAQRFGG------NQQQAMELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE ++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEERVKGLIEEMASAY-EDPSEVVEFYGKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ +F +L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETSFTELMNQQA 432
>gi|170767916|ref|ZP_02902369.1| trigger factor [Escherichia albertii TW07627]
gi|170123404|gb|EDS92335.1| trigger factor [Escherichia albertii TW07627]
Length = 432
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKPGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAADAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ IL ++ +++ TF++L + +
Sbjct: 405 EQAVEAILAKAKVTEKETTFNELMNQQA 432
>gi|254785724|ref|YP_003073153.1| trigger factor [Teredinibacter turnerae T7901]
gi|259533663|sp|C5BTI9|TIG_TERTT RecName: Full=Trigger factor; Short=TF
gi|237683968|gb|ACR11232.1| trigger factor [Teredinibacter turnerae T7901]
Length = 441
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 95/454 (20%), Positives = 218/454 (48%), Gaps = 15/454 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + GL+R L V IP+ + +R++ I GFR GKVP +K +G+
Sbjct: 1 MQVSIETTSGLERRLTVGIPAEIIDQEVEKRLKQAAKTVRINGFRKGKVPFKVVKQRFGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + + I+ + + + R A +PSI + + D++ ++++
Sbjct: 61 GVRQEVLGDTIQRSFYDAVRQESVRPAGQPSIEPKQM---------DEGKDVEYIATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D++++T+ E+ + +ID+ + + K ++E + +S+ GDKVT+D+
Sbjct: 112 YPEVELKELDNIEITRYDAEITDADIDKMVETLQKGQSSWEPVKRKSKKGDKVTIDFLGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + K Q +GS + + + G+K G+ + I FP+D+ ++DL K
Sbjct: 172 IDGEAFDGGEAKGHQLELGSGSMIPGFEKGITGMKAGETQPINVTFPDDYHVEDLRSKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ EV ++ + + G E R +++ + ++ KVK Q++
Sbjct: 232 EFEITVHEVLGEKLPKLDEEFYAKFGVTEGGEEKFREEVKSNMEREKQRAIKAKVKEQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + D+P +LV++E + Q++ + Q +QN+D + A+RR
Sbjct: 292 NALLESNSVDLPAALVQSEIGAMRQQMVQQ---YGQSAQNLDLQALLPDDMFKAQAERRT 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+++ + +K ++ ++++ +L ++ +++++++ LA + A E
Sbjct: 349 ALALIVSEVVKKYEVKA-DKDIVRSLIEEAASTYEDPQEVINYYYSNEQLLANVEAAALE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
+KV++ +L+ + D V++D++ + E
Sbjct: 408 EKVVELLLEKATVTDATVSYDEVIKPQEPQAEEA 441
>gi|161504376|ref|YP_001571488.1| trigger factor [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|189035952|sp|A9MM24|TIG_SALAR RecName: Full=Trigger factor; Short=TF
gi|160865723|gb|ABX22346.1| hypothetical protein SARI_02487 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 432
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/448 (19%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFVDAIIKEKINPAGAPN---------YVPGEYKVGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E++ + ++V + + EV + ++D + + K ++ K+ ++ D+VT+D+T +
Sbjct: 112 YPEVELTGLESIEVEKPVVEVTDADVDVMLDTLRKQQATWKEKDGAADAEDRVTLDFTGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLAMGQGRMIPGFEDGVKGHKVGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPSALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ E ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEVRVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ I+ +L ++ ++ +F++L + +
Sbjct: 405 EQAIEAVLAKAKVSEKATSFNELMNQQA 432
>gi|296101558|ref|YP_003611704.1| trigger factor [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295056017|gb|ADF60755.1| trigger factor [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 432
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/448 (19%), Positives = 206/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGELMSRNFIDAIIKEKINPAGAPN---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I V ++++D + + K ++ KE + D+VT+D+T S
Sbjct: 112 YPEVELKGLESIEVEKPIVSVTDEDVDGMLDTLRKQQANWKEKEGAVDAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ VR +VK Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRTEVRKNMERELNGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANEIDVPAALIDSEIDVLRRQAAQRFGG------NQQQAMELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE ++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEERVKGLIEEMASAY-EDPSEVIEFYGKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKATSFNELMNQQA 432
>gi|295096777|emb|CBK85867.1| trigger factor [Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 432
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/448 (19%), Positives = 206/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGELMSRNFIDAIIKEKINPAGAPN---------YVPGEYKQGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I V ++++D + + K ++ KE + D+VT+D+T S
Sbjct: 112 YPEVELKGLESIEVEKPIVSVTDEDVDGMLDTLRKQQANWKEKEGAVDAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ VR +VK Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRTEVRKNMERELNGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NQQQAMELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE ++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEERVKGLIEEMASAY-EDPSEVIEFYGKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ +F +L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETSFTELMNQQA 432
>gi|301154978|emb|CBW14441.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Haemophilus
parainfluenzae T3T1]
Length = 432
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 202/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ + + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVTITVPAEAVEKATREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEPGKDLSFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + E+ E +ID+ + + K + + ++ +VT+D+ S
Sbjct: 112 YPEVELKGLENIKVEKPTVEITEADIDKMIEVLRKQQATWVESKAAAKADSRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDINVTFPAEYHSENLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + ++ + ++ + +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKVEEMELPELTDEFVAKFGPNTKTVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S VE E N + + N + + + AKRRV
Sbjct: 292 NGLIEQNPIDVPASAVEEEINVLRNQAAQRFGG------NAQQAAQLPRELFEADAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKPDEERAKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKASSFDEIMNPQA 432
>gi|91793848|ref|YP_563499.1| trigger factor [Shewanella denitrificans OS217]
gi|122968618|sp|Q12LA0|TIG_SHEDO RecName: Full=Trigger factor; Short=TF
gi|91715850|gb|ABE55776.1| trigger factor [Shewanella denitrificans OS217]
Length = 434
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 95/448 (21%), Positives = 206/448 (45%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL R L + +P+ ++ + I +A + GFRPGKVPLS I YG+
Sbjct: 1 MQVSVETTEGLGRRLTISVPAEQIEKMVKDGITREAKRARLPGFRPGKVPLSEINKRYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + + E+++ E + A P+ + + +++I
Sbjct: 61 AIRQDVMGEVMQRNFIEAIIAEKLNPAGAPTFMPGKSV----------GESFEFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I ++ D + V Q EV++ ++D + + K + F V E S GDKV +++ S
Sbjct: 111 YPEITLTGLDTIAVEQPKAEVNDADLDAMIETLRKQHATFAVVERASAAGDKVKMNFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + + + +GS + + G K G+ +IE FPED+ ++L GK
Sbjct: 171 IDGEEFDGGKADDFELEIGSNRMIPGFETGVTGHKAGETFDIEVSFPEDYHAENLKGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G S A++ + + + E ++ VK Q++
Sbjct: 231 KFAITLTEVQAAQLPEVNDEFATLFGITSGGVDALKAEIRKNMTRELEQALKANVKEQVI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +P +L++ E + ++ ++ E + + A+RRV
Sbjct: 291 NGLLAANDVTIPSALIDGEVEVLRKQAMQRFGGQ------TKNMPELPAELFTEQAERRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + + ++ + +Q+ + + +++ ++ + +R E
Sbjct: 345 KIGLLLGEVIKTSELKAEDSRVQALIASMASAY-EDPAEVVAYYNSNKEMMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LKS ++ ++V F++ + +S
Sbjct: 404 EQAVEALLKSAKVTTKEVAFEEFMNKAS 431
>gi|311280667|ref|YP_003942898.1| trigger factor [Enterobacter cloacae SCF1]
gi|308749862|gb|ADO49614.1| trigger factor [Enterobacter cloacae SCF1]
Length = 432
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 88/448 (19%), Positives = 203/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFVDAIIKEKINPAGAPN---------YVPGEYKLGEDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + + ++V + + EV E ++D + + K ++ K+ + D+VTVD+T S
Sbjct: 112 YPEVALKDLNTIEVEKPVVEVTEADVDGMLDTLRKQQATWKDKDGAVDAEDRVTVDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLAMGQGRMIPGFEDGIKGRKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + VR ++K Q +
Sbjct: 232 KFVINLKKVEERELPELTAEFIKRFGVEDGSVDGLRAEVRKNMERELKGAVRNRIKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDGEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ E +Q + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRSNELKADEARVQGLIEEMASAY-EDPSEVVEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ TF++L + +
Sbjct: 405 EQAVEAVLNQAKVSEKATTFNELMNQPA 432
>gi|241764199|ref|ZP_04762233.1| trigger factor [Acidovorax delafieldii 2AN]
gi|241366476|gb|EER60980.1| trigger factor [Acidovorax delafieldii 2AN]
Length = 436
Score = 258 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 104/448 (23%), Positives = 210/448 (46%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + R++ + + GFRPGKVP++ + YG
Sbjct: 1 MSVTVETLEKLERKITLSVPLTTIQSEVDSRLKRLARTVKMDGFRPGKVPMNVVTQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E ++ R A +P IT EG + + +++
Sbjct: 61 SVQYEVLNDKVGEAFAVAANEAKLRVAGQPRITEKEGAPE---------GQVTFDAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTVDYT 178
P+++I +V + EV + ID+ + + K +F + + ++ GD+VTVD+
Sbjct: 112 FPEVKIGDLAGAEVEKLSAEVTDAAIDKTIDILRKQRRSFAQRALDAAAQDGDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E ++ QF+VG + E + + G+K+G+ K FP D+ KD+AGK
Sbjct: 172 GKIDGEPFEGGKAEDFQFLVGEGQMLKEFEDAVRGMKSGESKTFPLAFPADYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K++ + VN+ LA LG +R + +++ +F + + K
Sbjct: 232 TADFLVTVKKIEAAHLPEVNDALAKSLGIADGSVEGLRADIKKNLEREVKFRLLARNKAA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + K D+P + V+ E +L+ R E+ K E + A+R
Sbjct: 292 VMDALVAKAELDLPNASVQAEIARLLEGARAELKQRGIKDAEKA---EIPEDVFRPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + NN+ E++++ + + + + ++ + LAE+ A +
Sbjct: 349 RVRLGLVVAELVRANNLHAKPEQLKAHIDELAASY-EKPEDVVRWYFGDRQRLAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDN 444
E+ V + +L ++VD+ V+FD+L
Sbjct: 408 IENNVTEFVLGQAKVVDKAVSFDELMAQ 435
>gi|325577257|ref|ZP_08147741.1| trigger factor [Haemophilus parainfluenzae ATCC 33392]
gi|325160839|gb|EGC72960.1| trigger factor [Haemophilus parainfluenzae ATCC 33392]
Length = 432
Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats.
Identities = 82/448 (18%), Positives = 202/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ + + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVTITVPAEAVEKATREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEPGKDLSFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + E+ E +ID+ + + K + + ++ +VT+D+
Sbjct: 112 YPEVELKGLENIKVEKPTVEITEADIDKMIEVLRKQQATWVESKAAAKADSRVTIDFVGY 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDINVTFPAEYHSENLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + ++ + ++ + +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKVEEMELPELTDEFVAKFGPNTKTVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S VE E N + + N + + + AKRRV
Sbjct: 292 NGLIEQNPIDVPASAVEEEINVLRNQAAQRFGG------NAQQAAQLPRELFEADAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R+ + E
Sbjct: 346 QVGLLFSEVIKSNELKPDEERAKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRSVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKASSFDEIMNPQA 432
>gi|121997405|ref|YP_001002192.1| trigger factor [Halorhodospira halophila SL1]
gi|166229892|sp|A1WUM8|TIG_HALHL RecName: Full=Trigger factor; Short=TF
gi|121588810|gb|ABM61390.1| trigger factor [Halorhodospira halophila SL1]
Length = 436
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 109/448 (24%), Positives = 217/448 (48%), Gaps = 20/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL R + V +P+ R+ + R++D+ + + GFRPGKVP+ ++ YG
Sbjct: 1 MQVSVETTEGLGRRMTVQVPAERVENEVERRLKDLSGRVKMDGFRPGKVPVKVVRKQYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ SE + E++++ E L + R A P I DL+ S+D+
Sbjct: 61 QVRSEVLSEVVQQTYSEALEQESLRPAGNPHIEPKRTG---------EGEDLEYEASFDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+IE++ D +QV + E+ + ++D + + K + ++ + ++ D+V +D+ +
Sbjct: 112 LPEIEVAGLDQIQVERPQVEITDADLDNVLERLRKQHADYQEVDRAAQDEDRVVIDFHGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S ++ I+G+ L + L G K G + +E FP++ + +AGK
Sbjct: 172 IDGEAFTGNSAEDAPLILGAGQLPEAFEQGLQGAKAGQELTVEHKFPDELAEPSIAGKTA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K V P +++D A RLG + A+R +++ VRQ++KRQ+L
Sbjct: 232 VFQVTVKRVEEPQLPELDDDFAARLGIQEGGVEALREAVRGNLERERHQAVRQRLKRQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++++ ++P+SL++ E + + + E + Y +A RRV
Sbjct: 292 DQLADQNELELPKSLIDGEI---------QALRQQSGASAEGELPESERSAYEDVASRRV 342
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + I++ E M + L + + L + + L A + E
Sbjct: 343 KLGLLVNELVRSQGIQLDRERMMTQLREMAANSGQDPSEALQQIAQDRQMMQSLEASVIE 402
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++V+D +L+ VQ D+ ++FD+L ++
Sbjct: 403 EQVVDWLLEQVQTEDKTLSFDELMNSED 430
>gi|149911806|ref|ZP_01900409.1| peptidyl-prolyl cis/trans isomerase (trigger factor),
molecularchaperone involved in cell division [Moritella
sp. PE36]
gi|149805106|gb|EDM65129.1| peptidyl-prolyl cis/trans isomerase (trigger factor),
molecularchaperone involved in cell division [Moritella
sp. PE36]
Length = 436
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 90/451 (19%), Positives = 203/451 (45%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ R+ + I GFRPGKVP IK +G
Sbjct: 1 MQVSVETTQGLERRLTITVPAATVSKEIENRLRGLAKTQRIDGFRPGKVPAKVIKKRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E EI++ E + A P++ ++ D + ++
Sbjct: 61 AVAEEVAGEIMQRNFYEAIVAEKLNLAGAPTLE---------PAQVKEGEDFSFTATLEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ + +++ + + V + ++D + + K + + + +E D+V V++ S
Sbjct: 112 YPEFEVAGVEAIEIEKSVSSVTDADVDGMIETLRKQHAEWVAVDRAAEANDQVKVNFNGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ +G + E +VG G++ +E FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKAEDFTLAMGQGRMIPGFEEGIVGKSAGEEFTVEVTFPEEYHAENLKGKTA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V + +N + + G E + +++ S+ + + E ++ K ++L
Sbjct: 232 SFAITLNAVETQELPEINAEFVGKFGVEDGTLESLKVEISKNMSRELEQAIKADTKTKVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + D+P +L++ E + ++ + E + + A RRV
Sbjct: 292 DALVESNDIDIPAALIKQEIVTLREQAMQRFGQ-----MAPQNAPELPDELFTEQASRRV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VLG + N I + +Q + + +++ H++ ALA +R E
Sbjct: 347 KIGLVLGEFIKANEITADDARVQDMIASMASAY-EDPAEVIAHYKDNEQALANVRNVAVE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
D+ ID +L+ + +++V F++L + +++++
Sbjct: 406 DQAIDLVLEKANVTEKEVAFEELMNKATQNA 436
>gi|16759427|ref|NP_455044.1| trigger factor [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|16763828|ref|NP_459443.1| trigger factor [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29142801|ref|NP_806143.1| trigger factor [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|167990430|ref|ZP_02571530.1| trigger factor [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168231435|ref|ZP_02656493.1| trigger factor [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168240273|ref|ZP_02665205.1| trigger factor [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168465540|ref|ZP_02699422.1| trigger factor [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|194443426|ref|YP_002039690.1| trigger factor [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194448096|ref|YP_002044482.1| trigger factor [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194469072|ref|ZP_03075056.1| trigger factor [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|213161815|ref|ZP_03347525.1| trigger factor [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213419493|ref|ZP_03352559.1| trigger factor [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
gi|213425859|ref|ZP_03358609.1| trigger factor [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213580887|ref|ZP_03362713.1| trigger factor [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
gi|213616067|ref|ZP_03371893.1| trigger factor [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
gi|213646006|ref|ZP_03376059.1| trigger factor [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|213853067|ref|ZP_03382599.1| trigger factor [Salmonella enterica subsp. enterica serovar Typhi
str. M223]
gi|289804113|ref|ZP_06534742.1| trigger factor [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
gi|54039730|sp|P66933|TIG_SALTI RecName: Full=Trigger factor; Short=TF
gi|54042017|sp|P66932|TIG_SALTY RecName: Full=Trigger factor; Short=TF
gi|238690230|sp|B4T9E2|TIG_SALHS RecName: Full=Trigger factor; Short=TF
gi|238693542|sp|B4SWU0|TIG_SALNS RecName: Full=Trigger factor; Short=TF
gi|25300154|pir||AB0558 trigger factor [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16418954|gb|AAL19402.1| peptidyl-prolyl cis/trans isomerase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16501718|emb|CAD08906.1| trigger factor [Salmonella enterica subsp. enterica serovar Typhi]
gi|29138433|gb|AAO70003.1| trigger factor [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|194402089|gb|ACF62311.1| trigger factor [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194406400|gb|ACF66619.1| trigger factor [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194455436|gb|EDX44275.1| trigger factor [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|195631846|gb|EDX50366.1| trigger factor [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|205330892|gb|EDZ17656.1| trigger factor [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205334056|gb|EDZ20820.1| trigger factor [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205340030|gb|EDZ26794.1| trigger factor [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261245730|emb|CBG23527.1| trigger factor [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992162|gb|ACY87047.1| trigger factor [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301157058|emb|CBW16542.1| trigger factor [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312911480|dbj|BAJ35454.1| trigger factor [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321226025|gb|EFX51076.1| Cell division trigger factor [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323128767|gb|ADX16197.1| trigger factor [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|332987396|gb|AEF06379.1| trigger factor [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 432
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/448 (19%), Positives = 210/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFVDAIIKEKINPAGAPN---------YVPGEYKVGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E++ + ++V + + EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEVELTGLESIEVEKPVVEVTDADVDVMLDTLRKQQATWKEKDGAADAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLAMGQGRMIPGFEDGVKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPSALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVSEKATSFNELMNQQA 432
>gi|308050309|ref|YP_003913875.1| trigger factor [Ferrimonas balearica DSM 9799]
gi|307632499|gb|ADN76801.1| trigger factor [Ferrimonas balearica DSM 9799]
Length = 433
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 92/447 (20%), Positives = 217/447 (48%), Gaps = 17/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R + + + + E ++ + + GFRPGKVP+S K +G
Sbjct: 1 MQVSVETTQGLERRMTITVAAADFEPKVQEEMKKEAKRVRLDGFRPGKVPVSVFKKRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI ++ + +++++ + + ++ A P + E DL+ ++++
Sbjct: 61 SIRAQVMGDVMQQSFFQAIVEQKINPAGMPKFEPLKN---------EEGADLEFAATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + CEV++ ++D + + K + F+ + E+ D+ +D+T S
Sbjct: 112 YPEVELQGLDAIEVEKPTCEVNDADVDAMLETLRKQHAEFKAVDREAGDNDRAKIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + ++GS + E + G K GD+ I+ FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKAEGFDLVIGSGRMIPGFEEGVKGHKAGDEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +N++ V+ G A+R + +++ ++ VK+Q++
Sbjct: 232 QFAIKLTSVEEQVLPELNDEFVVKFGIAEGGVEALRAEVRKNMERELTQALKNAVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + D+P++L+ +E N + Q+ +++ E + + AKRRV
Sbjct: 292 DGLVKANDIDMPQALINSEINVLRQQAMQRFGGMQG-----NNMPELPAELFQDEAKRRV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + +++V EE +++ + + ++++D+++ + +R E
Sbjct: 347 QIGLLLGEVIKSQDLKVEEERVEALIASMASAY-EDPQEVVDYYKGNQEMMQNMRNVALE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ ++ IL ++ +++V FD+ +
Sbjct: 406 EQAVEAILSGAKVTEKEVNFDEFMNQQ 432
>gi|37527730|ref|NP_931075.1| trigger factor [Photorhabdus luminescens subsp. laumondii TTO1]
gi|41018166|sp|Q7N0L2|TIG_PHOLL RecName: Full=Trigger factor; Short=TF
gi|36787166|emb|CAE16242.1| trigger factor (TF) (chaperone) [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 434
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 92/447 (20%), Positives = 212/447 (47%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + +P+ + + + + ++ K I GFR GKVP++ +K YG
Sbjct: 1 MQVSVETTQGLGRRVTITVPAADVEKAVSSELVNVAKKVRIDGFRKGKVPMNVVKQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ + + ++++ + ++ A PS + D + +++
Sbjct: 61 SVIQDVLSDLMQRNFINAIIEQKINPAGAPS---------YAPEQFKNGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ + ++V + + EV ++++D + + K ++ E D+VTVD+ S
Sbjct: 112 YPEIELKDLESIEVEKPVVEVKDEDVDAMLETLRKQQANWKETEEAVGAEDRVTVDFNGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G++ I+ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGIVGHKAGEEFTIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V N + R G + +R + +++ + VR ++K Q++
Sbjct: 232 KFAITLKKVEQRELPEFNEEFIKRFGIADGTVDGLRAEVRKNMERELKNAVRNRIKSQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP ++V++E + + ++ N E + + AKRRV
Sbjct: 292 DGLVKVNEIDVPAAIVDSEIDVLRRQSAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE +++ + + + +++++ + K + +R E
Sbjct: 346 VVGLLLGEVISSNELKADEERVKALIEEMASAY-EAPQEVIEFYGKNQELMNNVRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEVLLGKAKVSEKETTFNELMNQN 431
>gi|262404276|ref|ZP_06080831.1| cell division trigger factor [Vibrio sp. RC586]
gi|262349308|gb|EEY98446.1| cell division trigger factor [Vibrio sp. RC586]
Length = 433
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 88/449 (19%), Positives = 212/449 (47%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + + V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLESIAVEKPSAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E +N +G+ + + +VG G + I+ FPED+ ++L GK
Sbjct: 172 IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ R G A++ + +++ + ++ ++K Q +
Sbjct: 232 QFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L++ E + Q+ NV++ + + + AKRRV
Sbjct: 292 EGLVKANEIDVPSALIDQEIGVLRQQAAQRFGG------NVEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEEKVKALITEMATAY-EDPTEVVAYYEQNQQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ +D I+ ++ ++ ++F +L + +
Sbjct: 405 EQAVDAIIAKAKVTEKAISFSELMNPVAA 433
>gi|56414397|ref|YP_151472.1| trigger factor [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161615360|ref|YP_001589325.1| trigger factor [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|167551738|ref|ZP_02345491.1| trigger factor [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|168237561|ref|ZP_02662619.1| trigger factor [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168261117|ref|ZP_02683090.1| trigger factor [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|194737715|ref|YP_002113478.1| trigger factor [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197249214|ref|YP_002145428.1| trigger factor [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197264258|ref|ZP_03164332.1| trigger factor [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197363317|ref|YP_002142954.1| trigger factor [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|198245040|ref|YP_002214401.1| trigger factor [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|200389308|ref|ZP_03215919.1| trigger factor [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|205351758|ref|YP_002225559.1| trigger factor [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207855927|ref|YP_002242578.1| trigger factor [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|67461659|sp|Q5PFN3|TIG_SALPA RecName: Full=Trigger factor; Short=TF
gi|189035953|sp|A9MWX9|TIG_SALPB RecName: Full=Trigger factor; Short=TF
gi|226738689|sp|B5EXI7|TIG_SALA4 RecName: Full=Trigger factor; Short=TF
gi|226738690|sp|B5FKV2|TIG_SALDC RecName: Full=Trigger factor; Short=TF
gi|226738691|sp|B5QTJ5|TIG_SALEP RecName: Full=Trigger factor; Short=TF
gi|226738692|sp|B5R6U8|TIG_SALG2 RecName: Full=Trigger factor; Short=TF
gi|238689942|sp|B5BD84|TIG_SALPK RecName: Full=Trigger factor; Short=TF
gi|238690696|sp|B4TMC5|TIG_SALSV RecName: Full=Trigger factor; Short=TF
gi|56128654|gb|AAV78160.1| trigger factor [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161364724|gb|ABX68492.1| hypothetical protein SPAB_03131 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194713217|gb|ACF92438.1| trigger factor [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197094794|emb|CAR60327.1| trigger factor [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197212917|gb|ACH50314.1| trigger factor [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197242513|gb|EDY25133.1| trigger factor [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197289484|gb|EDY28847.1| trigger factor [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197939556|gb|ACH76889.1| trigger factor [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|199601753|gb|EDZ00299.1| trigger factor [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|205271539|emb|CAR36357.1| trigger factor [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205323502|gb|EDZ11341.1| trigger factor [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205349786|gb|EDZ36417.1| trigger factor [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|206707730|emb|CAR32015.1| trigger factor [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|322614725|gb|EFY11654.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618831|gb|EFY15719.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322623538|gb|EFY20377.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322631884|gb|EFY28638.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322637379|gb|EFY34081.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642064|gb|EFY38674.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647883|gb|EFY44358.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322652561|gb|EFY48915.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322653277|gb|EFY49610.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322660574|gb|EFY56810.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322664726|gb|EFY60919.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669221|gb|EFY65371.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322670766|gb|EFY66899.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322678995|gb|EFY75050.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|323192959|gb|EFZ78182.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323196959|gb|EFZ82101.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323203944|gb|EFZ88961.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323206971|gb|EFZ91924.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323214174|gb|EFZ98932.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323214502|gb|EFZ99253.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323227008|gb|EGA11189.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323230174|gb|EGA14294.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323233912|gb|EGA18001.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323238394|gb|EGA22452.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323246242|gb|EGA30225.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251868|gb|EGA35731.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323257865|gb|EGA41544.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323261122|gb|EGA44714.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323264948|gb|EGA48447.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323272511|gb|EGA55918.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|326622150|gb|EGE28495.1| trigger factor [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
gi|326626793|gb|EGE33136.1| trigger factor [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 432
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/448 (19%), Positives = 210/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFVDAIIKEKINPAGAPN---------YVPGEYKVGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E++ + ++V + + EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEVELTGLESIEVEKPVVEVTDADVDVMLDTLRKQQATWKEKDGAADAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLAMGQGRMIPGFEDGVKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVSEKATSFNELMNQQA 432
>gi|206575727|ref|YP_002240084.1| trigger factor [Klebsiella pneumoniae 342]
gi|288936835|ref|YP_003440894.1| trigger factor [Klebsiella variicola At-22]
gi|290510109|ref|ZP_06549479.1| trigger factor tig [Klebsiella sp. 1_1_55]
gi|226738684|sp|B5Y0U3|TIG_KLEP3 RecName: Full=Trigger factor; Short=TF
gi|206564785|gb|ACI06561.1| trigger factor [Klebsiella pneumoniae 342]
gi|288891544|gb|ADC59862.1| trigger factor [Klebsiella variicola At-22]
gi|289776825|gb|EFD84823.1| trigger factor tig [Klebsiella sp. 1_1_55]
Length = 432
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/448 (19%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + ++ + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIENAVKSELVNVAKKVRIDGFRKGKVPMNVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRHFVDAIIKEKINPAGAPN---------YVPGEYKLGEDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + EV + ++D + + K ++ K+ + D+VT+D+T S
Sbjct: 112 YPEVELQGLDAIEVEKPVVEVTDADVDTMLETLRKQQATWKDKDGAVDAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANEIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPSEVVEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVSEKATSFNELMNQQA 432
>gi|145637964|ref|ZP_01793603.1| trigger factor [Haemophilus influenzae PittHH]
gi|145268830|gb|EDK08794.1| trigger factor [Haemophilus influenzae PittHH]
Length = 432
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 82/448 (18%), Positives = 207/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAIREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + ++ D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMINVLRKQQATWAESQDVAKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFGGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKVENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S+VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPASVVEEEINVLRNQAAQRFGG------NTQQAAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ +E ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADKERAKAMIADIASAY-EQPAEVVEYYSKNKELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKVSSFDEIMNPQA 432
>gi|297516114|ref|ZP_06934500.1| trigger factor [Escherichia coli OP50]
Length = 432
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITITADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|157155935|ref|YP_001461623.1| trigger factor [Escherichia coli E24377A]
gi|209917653|ref|YP_002291737.1| trigger factor [Escherichia coli SE11]
gi|256020407|ref|ZP_05434272.1| trigger factor [Shigella sp. D9]
gi|332281587|ref|ZP_08394000.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Shigella sp.
D9]
gi|166987587|sp|A7ZIJ4|TIG_ECO24 RecName: Full=Trigger factor; Short=TF
gi|226738680|sp|B6HZP3|TIG_ECOSE RecName: Full=Trigger factor; Short=TF
gi|157077965|gb|ABV17673.1| trigger factor [Escherichia coli E24377A]
gi|209910912|dbj|BAG75986.1| trigger factor [Escherichia coli SE11]
gi|320201680|gb|EFW76256.1| Cell division trigger factor [Escherichia coli EC4100B]
gi|323184733|gb|EFZ70104.1| trigger factor [Escherichia coli 1357]
gi|324016704|gb|EGB85923.1| trigger factor [Escherichia coli MS 117-3]
gi|332103939|gb|EGJ07285.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Shigella sp.
D9]
Length = 432
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKDKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|330824070|ref|YP_004387373.1| Trigger factor [Alicycliphilus denitrificans K601]
gi|329309442|gb|AEB83857.1| Trigger factor [Alicycliphilus denitrificans K601]
Length = 436
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 105/449 (23%), Positives = 214/449 (47%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + R++ + + GFRPGKVP+S + YG
Sbjct: 1 MAVTVETLEKLERKITLSLPVTTIQSEVDARLKRLARTVKMDGFRPGKVPMSVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E + ++ R A +P IT +G + + +++
Sbjct: 61 SVQYEVLNDKVGEAFAQAANEAQLRVAGQPRITEKDGAPE---------GQVTFDAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P+++I +V + EV E ID+ + + K F + +E GD+VTVD+
Sbjct: 112 FPEVKIGDLATAEVDKLSAEVTEAAIDKTLDILRKQRRTFAQRAQGAAAEDGDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + ++ QF+VG + E + + G+KTG+ K FPED+ KD+AGK
Sbjct: 172 GKIDGEPFQGGKAEDFQFLVGEGQMLKEFEDAVRGMKTGESKTFPLAFPEDYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K++ + VN LA LG + +R + +++ +F ++ + K+
Sbjct: 232 TADFLVTVKKIEASHLPEVNEQLAKSLGIADGTVEGLRADIKKNLEREVKFRLQARNKQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + K D+P + V+ E +L+ R E+ K + E + A+R
Sbjct: 292 VMDALVAKAELDLPNASVQAEIARLLEGARAELKQRGVKDADKA---EIPEDVFRPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + N+++ E++++ + + + + ++ + LAE+ A +
Sbjct: 349 RVRLGLVIAELVRANDLQAKPEQLKAHIDELAASY-EKPEDVVRWYFSDRQRLAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V D +L ++ ++ V+FD+L +
Sbjct: 408 IENNVTDFVLGKAKVNEKAVSFDELMGQA 436
>gi|268592037|ref|ZP_06126258.1| trigger factor [Providencia rettgeri DSM 1131]
gi|291312429|gb|EFE52882.1| trigger factor [Providencia rettgeri DSM 1131]
Length = 434
Score = 258 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 87/446 (19%), Positives = 211/446 (47%), Gaps = 18/446 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + +P+ + + N + + K + GFR GKVP++ +K YG
Sbjct: 1 MQVSVETTQGLGRRVTITVPATDIEKAVNSELVSVAKKVRVDGFRKGKVPMNIVKQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ + + ++++ + ++ A PS + +E D + +++
Sbjct: 61 SVMQDVLGDVMQRNFINAIIEQKINPAGAPSYKPEQ---------LEDGKDFVYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE++ + ++V + V +++++ + + K ++ E +E ++T+++T S
Sbjct: 112 YPEIELTGLETIEVEKPAVSVKDEDLENMLETLRKQQAQWKEVEAAAEADSRITINFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ ++G + E +VG K G++ +IE FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAEDFALVMGEGRMIPGFEEGVVGHKAGEEFDIEVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + R G +R + +++ + VR +VK Q+L
Sbjct: 232 KFAIVLKKVEQRELPEFTEEFIKRFGIADGSLDGLRAEVRKNMERELKNAVRNRVKAQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP ++V+ E + + ++ + E + + AKRRV
Sbjct: 292 DGLIKANDIEVPAAVVDGEIDVLRRQAAQRFGG------DEKQAMELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + KN ++ E+ +++ + + + ++++++ K + +R E
Sbjct: 346 VIGLLLGEVINKNELKADEDRVKALIEEMASAY-EDPAEVIEYYSKNEELMNSVRNLALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
++ ++ +L ++ +++ F +L +
Sbjct: 405 EQAVETVLAVAKVTEKETNFTELMNQ 430
>gi|319763665|ref|YP_004127602.1| trigger factor [Alicycliphilus denitrificans BC]
gi|317118226|gb|ADV00715.1| trigger factor [Alicycliphilus denitrificans BC]
Length = 436
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 106/449 (23%), Positives = 214/449 (47%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + N R++ + + GFRPGKVP+S + YG
Sbjct: 1 MAVTVETLEKLERKITLSLPVTTIQSEVNARLKRLARTVKMDGFRPGKVPMSVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E + ++ R A +P IT +G + + +++
Sbjct: 61 SVQYEVLNDKVGEAFAQAANEAQLRVAGQPRITEKDGAPE---------GQVTFDAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P+++I +V + EV E ID+ + + K F + +E GD+VTVD+
Sbjct: 112 FPEVKIGDLATAEVDKLSAEVTEAAIDKTLDILRKQRRTFAQRAQGAAAEDGDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + ++ QF+VG + E + + G+KTG+ K FPED+ KD+AGK
Sbjct: 172 GKIDGEPFQGGKAEDFQFLVGEGQMLKEFEDAVRGMKTGESKTFPLAFPEDYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K++ + VN LA LG + +R + +++ +F ++ + K+
Sbjct: 232 TADFLVTVKKIEAAHLPEVNEQLAKSLGIADGTVEGLRADIKKNLEREVKFRLQARNKQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + K D+P + V+ E +L+ R E+ K + E + A+R
Sbjct: 292 VMDALVAKAELDLPNASVQAEIARLLEGARAELKQRGVKDADKA---EIPEDVFRPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + N+++ E++++ + + + + ++ + LAE+ A +
Sbjct: 349 RVRLGLVIAELVRTNDLQAKPEQLKAHIDELAASY-EKPEDVVRWYFSDRQRLAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V D +L ++ ++ V+FD+L +
Sbjct: 408 IENNVTDFVLGKAKVNEKAVSFDELMGQA 436
>gi|168818942|ref|ZP_02830942.1| trigger factor [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205343954|gb|EDZ30718.1| trigger factor [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320084721|emb|CBY94512.1| Trigger factor TF [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 432
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 89/448 (19%), Positives = 210/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFVDAIIKEKINPAGAPN---------YVPGEYKVGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E++ + ++V + + EV + ++D + + K ++ K+ ++ D+VT+D+T S
Sbjct: 112 YPEVELTGLESIEVEKPVVEVTDADVDVMLDTLRKQQATWKEKDGAADAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLAMGQGRMIPGFEDGVKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPSALIDSEIDVLRRQAAQRFGG------NEKQDLELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVSEKATSFNELMNQQA 432
>gi|84503447|ref|ZP_01001507.1| trigger factor [Oceanicola batsensis HTCC2597]
gi|84388234|gb|EAQ01186.1| trigger factor [Oceanicola batsensis HTCC2597]
Length = 442
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 129/451 (28%), Positives = 241/451 (53%), Gaps = 9/451 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + +P++ L NE++ + + + +KGFR GKVP++ +K +G
Sbjct: 1 MQVTETLNEGLKRGYQITLPASELDAKVNEKLAEAQPQVEMKGFRKGKVPMALLKKQFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
IL E + E + + E + ++ A +P + + +G + D+ + ++Y+
Sbjct: 61 RILGEAMQEAVDGAMSEHFEQTGDKPATQPDVQMVDG------ENWKEGDDVVVNMNYEA 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+I + + + + + +E ++D + +A+N F+ K+ +E GD+V +D+
Sbjct: 115 LPEIPEVELKGITLEKLVVKAEESDVDEALQNLAENAQDFDAKDGAAEDGDQVVMDFVGK 174
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E S ++ ++GS E LVG G++K + FP ++ + LAGK+
Sbjct: 175 VDGEAFEGGSAEDYPLVLGSNSFIPGFEEQLVGATAGEEKSVTVTFPAEYGAEHLAGKEA 234
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +IKEV +P+ ++++LA + G + +A+R ++++ R +KRQ+LD
Sbjct: 235 TFDCTIKEVKAPVAAKIDDELAKKYGSDDLAALRQQVVERLEAEYSGAARAVMKRQLLDE 294
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ +FD+P SLVE E I ++ E N Q D + E + + LA+RRV
Sbjct: 295 LDKAVSFDLPPSLVEAEAKQIAHQLWHE---ENPDVQGHDHPEIETTEEHTKLAERRVRL 351
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G++L +G++ +EVT+ EM A+ Q ++PG E++ + Q+ +LRAPIFEDK
Sbjct: 352 GLLLAELGQRAEVEVTDAEMTQAIMNQARQYPGQERQFFEFVQQNEQMRQQLRAPIFEDK 411
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
V+D++ + + +++V+ D L + E
Sbjct: 412 VVDYVFELADVSEKEVSKDDLQKAVEKLEEE 442
>gi|260222838|emb|CBA32806.1| Trigger factor [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 436
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 96/449 (21%), Positives = 211/449 (46%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + R+ + + GFRPGKVP++ + YG
Sbjct: 1 MAVTVETLEKLERKITLTLPVGVIQTEVDSRLRKLARTVKMDGFRPGKVPMNVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E ++ R A +P I+ +E + + +++
Sbjct: 61 SVHYEVMNDKVGEAFATAANEAKLRVAGQPKISESETSPE---------GQMAFDAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
P+++I+ +V + +V ++ ID+ + + K F ++T ++ D+VTVD+
Sbjct: 112 FPEVKIADLAGAEVEKLTADVTDEAIDKTIEILRKQRRTFAQRAQDTAAQDTDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + QFI+G + E + G+K+G+ K FP D+ KD+AGK
Sbjct: 172 GKIDGEPFAGGKAADFQFILGDGQMLKEFEDATRGMKSGESKTFPLAFPADYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K++ + V+ LA LG + A+R + +++ + + + K+
Sbjct: 232 TADFLVTLKKLEAANLPEVDGALAKSLGIADGTVEALRADIRKNLEREVKHRLLARNKQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+D + K D+P+S V+ E + +++ R ++ K + I + + A+R
Sbjct: 292 AMDALVAKAELDLPKSSVQAELDRMVENARADLKQRGIKDADKAPIPD---DIFRPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + N++ E++++ + + + ++ + +AE+ A +
Sbjct: 349 RVRLGLVVAELVRSNDLAAKPEQIKAHVEELAASY-EKPADVIRWYYGDNRRMAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V ++IL ++ D+ V+FD+L +
Sbjct: 408 IENNVTEYILSKAKVTDKSVSFDELMGQN 436
>gi|85716432|ref|ZP_01047404.1| trigger factor [Nitrobacter sp. Nb-311A]
gi|85696789|gb|EAQ34675.1| trigger factor [Nitrobacter sp. Nb-311A]
Length = 453
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 142/453 (31%), Positives = 257/453 (56%), Gaps = 3/453 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGL+ E + IP+ +T +ER+ D++ K I GFRPGKVP+SH+K LYG+
Sbjct: 1 MQVNETLAEGLRHEFQISIPAAEITAKADERLVDLKDKVKINGFRPGKVPVSHLKKLYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ ETI++ I++ +I++ R + A P +T+ E +I + G DL ++ ++
Sbjct: 61 SVMVETIEDTIRDTNMQIVNDRGFKLAGNPKVTMPSEEKEIEDI-LAGKSDLSYSVAIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
+P IE++ F + + + +V + ++D + IA N + + ++E GD++T+ +
Sbjct: 120 VPPIELADFKSFTLEKPVVDVSDADVDEAIKRIADQNRTYTARAEGAKAENGDRITISFK 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + E S +++ ++GS L E LVG G+ + ++ FP++++ +LAGK
Sbjct: 180 GKIDGELFEGGSSEDILVVLGSNALIPGFEEQLVGAGVGETRTVKASFPKNYADSELAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + +P + ++++ A LG E ++ + +++ +RQ VKR +
Sbjct: 240 DAEFETTVSLIEAPQDLKIDDEFAKLLGLEELDQLKQVVREQLSAEFARAMRQHVKRALF 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD P +LVE E+ + + + EM + + ++ +EE Y +A RRV
Sbjct: 300 DRLDETHKFDAPPTLVEEEFEQVWKSITAEMEKEKKTFADENTTEEEAKAEYRRIADRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL IGEKN I V ++E+ AL + + PG EK++ D++QK P ALA++RAP+FE
Sbjct: 360 RLSLVLSEIGEKNGITVADDEINRALISRARQTPGREKEIWDYYQKNPQALAQIRAPLFE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
+KV+D IL+ I +++VT + LF S E
Sbjct: 420 NKVVDFILELATITEKRVTREDLFKEHEAHSSE 452
>gi|117921103|ref|YP_870295.1| trigger factor [Shewanella sp. ANA-3]
gi|166229938|sp|A0KYM0|TIG_SHESA RecName: Full=Trigger factor; Short=TF
gi|117613435|gb|ABK48889.1| trigger factor [Shewanella sp. ANA-3]
Length = 434
Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 208/448 (46%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + ++ +A I GFRPGKVP++ I YG
Sbjct: 1 MQVSVEATQGLERRLTISVPAEQIEKLVKDSLQREAKRARIPGFRPGKVPVTVINKRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + E+++ E + A P+ + +++I
Sbjct: 61 AIRQDITGEVMQRNFIEAIIAEKLNPAGAPTFVPGAT----------DGEKFEFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V Q V + ++D + + K + F E E+ GDKV +++ S
Sbjct: 111 YPEVELKGLDAIEVEQPKASVTDADVDSMIETLRKQHATFAAVEREAADGDKVKMNFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD V E + + +GS + ++G K G++ I+ FPE++ ++L GK
Sbjct: 171 VDGVEFEGGKADDFELQLGSGRMIPGFEAGILGHKAGEEFVIDVTFPEEYHAENLKGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ + + + E ++ VK Q++
Sbjct: 231 KFAITLTEVLAANLPEVNDEFAALFGISEGGLDALKTEIRKNMNRELEQALKANVKEQVI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++P++L++ E N + Q+ ++ E + + A RRV
Sbjct: 291 TGLLANNDIELPKALIDGEVNVLRQQAMQRFGGQ------TANMPELPAELFTEQAARRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E +Q+ + + +++ ++ + +R E
Sbjct: 345 KIGLLLGEVIKTNELKAEDERVQALIASMASAY-EDPSEVVAYYNSNKELMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LKS ++ +++V F++ + ++
Sbjct: 404 EQAVEALLKSAKVTEKEVAFEEFMNKAT 431
>gi|288941150|ref|YP_003443390.1| trigger factor [Allochromatium vinosum DSM 180]
gi|288896522|gb|ADC62358.1| trigger factor [Allochromatium vinosum DSM 180]
Length = 427
Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats.
Identities = 91/446 (20%), Positives = 210/446 (47%), Gaps = 21/446 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R + V +P + + +R++ + +A + GFRPGKVP+ ++ Y
Sbjct: 1 MQVSVEAGEGLERRMRVDLPFDEVGAEVEKRLQQLARRAKLPGFRPGKVPMKVLRQRYNA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E +++++ + + + A P I L + +++
Sbjct: 61 ELHQEVFGDMVQKTLYKAFEQESLMPAGMPHIE---------PDLDIDAGRMAYTAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P+I ++S D V + + E+ + ++D + + + + E ++ GD++++ + +
Sbjct: 112 MPEITLASVSDRVVKRPVSELTDTDLDDMIQRLREQRKTWAAVERPAQAGDQLSIGFVGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ E + + +GS L + LVG G+ + ++ FPE + + LAGK V
Sbjct: 172 IEGEAFEGGTTTGFKLELGSGRLIPGFEDGLVGATVGETRTLDLTFPEGYQAEHLAGKPV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
R +++ + P V+ + G E + + +++ + + + K +++
Sbjct: 232 RFEVTVESIAEPRLPEVDAEFVKNFGVEDGDVERFKADVRRNMERELKERLTARTKERVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + D+P++L+++E +++++R + + + + AKRRV
Sbjct: 292 DMLYEANPVDLPKALIQSEMRTMVEQMRQALGGGQMQL---------PPEMFEPGAKRRV 342
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG I N I+ E ++ + + + +++LD++ L+ +RA + E
Sbjct: 343 ALGLILGQIIRDNEIKADPERVRETVERMAASY-EQPQEVLDYYYGDEERLSSVRALVME 401
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
++V+D +L+ VQ+ D +TF QL +
Sbjct: 402 EQVVDLMLEQVQVEDEPLTFAQLTEQ 427
>gi|89900345|ref|YP_522816.1| trigger factor [Rhodoferax ferrireducens T118]
gi|119370926|sp|Q21Y68|TIG_RHOFD RecName: Full=Trigger factor; Short=TF
gi|89345082|gb|ABD69285.1| trigger factor [Rhodoferax ferrireducens T118]
Length = 436
Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats.
Identities = 101/449 (22%), Positives = 212/449 (47%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + R++ + + GFRPGKVP++ + YG
Sbjct: 1 MAVTVETLEKLERKMTLTLPVGIVESEVQSRLKKLARTIKMDGFRPGKVPMNVVSQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E ++ R A +P I+ +E + ++ +++
Sbjct: 61 SVHYEVMNDKVGEAFFNAANEAKLRVAGQPRISESEASPE---------GEMAFDAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P ++I +V + EV + ID+ + + K F + ++ GD+VTVD+
Sbjct: 112 YPDVKIGDLSTAEVEKISAEVTDSAIDKTVDILRKQRRTFSQRPHDAAAQDGDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + ++ QFIVG + E E G+K+G+ K + FP D+ KD+AGK
Sbjct: 172 GKIDGEVFAGGKAEDFQFIVGDGQMLKEFEEATRGMKSGESKTFQMAFPADYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K++ + V+ LA LG E + +R + + + + + + K+
Sbjct: 232 TADFMVTLKKIEAAHLPDVDGALAKSLGIEDATVEGLRADIKKNLAREVKARLLARNKQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + K D+P + V+ E N +++ R ++ K + + E + A+R
Sbjct: 292 VMDALVGKAELDLPNASVQAEVNRLMEGARADLKQRGIKDADKAPMPE---DIFRPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + NN++ T E++++ + + + ++ + N LAE+ A +
Sbjct: 349 RVRLGLVVAELVRSNNLQATPEQVKAHIEELAASY-EKPADVMRWYYSDNNRLAEVEAIV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V + +L ++ D+ ++FD+L +
Sbjct: 408 IENNVTNFVLAQAKVSDKALSFDELMAQN 436
>gi|147989|gb|AAA62791.1| trigger factor [Escherichia coli]
Length = 432
Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats.
Identities = 87/448 (19%), Positives = 203/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELEGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELRAPSVTALSSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|300721992|ref|YP_003711272.1| peptidyl-prolyl cis/trans isomerase [Xenorhabdus nematophila ATCC
19061]
gi|297628489|emb|CBJ89056.1| peptidyl-prolyl cis/trans isomerase (trigger factor), molecular
chaperone involved in cell division [Xenorhabdus
nematophila ATCC 19061]
Length = 434
Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats.
Identities = 90/447 (20%), Positives = 212/447 (47%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + +P+ + + + + ++ K I GFR GKVP+ ++ YG
Sbjct: 1 MQVSVETTQGLGRRVSITVPAADIEKAVSSELVNVAKKVRIDGFRKGKVPMKIVQQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L + + ++++ + ++ A PS + + D + +++
Sbjct: 61 SVLQDVLGDLMQRNFVNAIIEQKINPADAPSYKPEQ---------FKEGEDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ ++++V + + EV + ++D + + K ++ + + D+VTVD+T S
Sbjct: 112 YPEIELKGLEEIEVEKPVVEVKDADVDTMLDTLRKQQANWKETDEAATAEDRVTVDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + + +VG K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKSTDFVLAMGQGRMIPGFEDGVVGHKAGEEFTIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G + +R + +++ + VR ++K Q+L
Sbjct: 232 KFAINLKKVEQRELPELTEEFIQRFGIADGTVEGLRAEVRKNMERELKNAVRNRIKTQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP ++V+ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVKANEIDVPAAVVDGEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++V E+ + + + + + K++++++ K + +R E
Sbjct: 346 VVGLLLGEVISSNELKVDEDRVNALIEEMAAAY-EDPKEVVEYYSKNKEMMNNVRNIALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ ++ +L ++ +++ F+ L + +
Sbjct: 405 EQAVELVLSKAKVSEKETGFNDLMNQN 431
>gi|24373359|ref|NP_717402.1| trigger factor [Shewanella oneidensis MR-1]
gi|41018226|sp|Q8EG20|TIG_SHEON RecName: Full=Trigger factor; Short=TF
gi|24347619|gb|AAN54846.1|AE015623_8 trigger factor [Shewanella oneidensis MR-1]
Length = 434
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 92/448 (20%), Positives = 206/448 (45%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + ++ +A I GFRPGKVP++ I YG
Sbjct: 1 MQVSVEATQGLERRLTISVPAEQIEKLVKDSLQREAKRARIPGFRPGKVPVTVINKRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + E+++ E + A P+ + +++I
Sbjct: 61 AIRQDITGEVMQRNFIEAIIAEKLNPAGAPTFVPGAT----------DGEKFEFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D + V Q V + ++D + + K + F E E+ GDKV +++ S
Sbjct: 111 YPEVELKGLDAIVVEQPKASVTDADVDSMIETLRKQHATFAAVEREAVDGDKVKMNFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD V E ++ + +GS + ++G K G++ I+ FPE++ ++L GK
Sbjct: 171 VDGVEFEGGKAEDFELQLGSGRMIPGFEAGILGHKAGEEFVIDVTFPEEYHAENLKGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ + + + E ++ VK Q++
Sbjct: 231 KFAITLTEVLAANLPEVNDEFAALFGITEGGLEALKTEIRKNMNRELEQALKANVKEQVI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++P++L++ E N + Q+ ++ E + + A RRV
Sbjct: 291 AGLLANNDIELPKALIDGEVNVLRQQAMQRFGGQ------TANMPELPAELFTEQAARRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E +Q + + +++ ++ + +R E
Sbjct: 345 KIGLLLGEVIKTNELKAEDERVQGLIASMASAY-EDPSEVIAYYNSNKELMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LK+ ++ ++ V F++ + ++
Sbjct: 404 EQAVEALLKTAKVTEKTVAFEEFMNKAT 431
>gi|90417351|ref|ZP_01225276.1| Trigger factor [marine gamma proteobacterium HTCC2207]
gi|90330793|gb|EAS46062.1| Trigger factor [marine gamma proteobacterium HTCC2207]
Length = 437
Score = 257 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 90/452 (19%), Positives = 202/452 (44%), Gaps = 17/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + S GL+R+L + +P++R+ +R++ +IKGFR GKVP +K +GK
Sbjct: 1 MQVSIESSTGLERQLKIGVPADRVESEVAQRLQKATKTVSIKGFRKGKVPFKVVKQQFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + EI+ E +++ + +P I DL+ +++
Sbjct: 61 GVRQEVVGEIVNSSFYEAIAQEKLQPVGQPRID---------DIKDSEGQDLEFLAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I ++ D + +T+ + ++ + ++D+ + + FE + GD++ +DY +
Sbjct: 112 YPEIALADLDKVSITRPVTDLSDADLDKMIDVLRDQQATFEASGKAAVDGDQLNIDYVGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ ++GS + + LVG GD K ++ FP+D+ ++L G KV
Sbjct: 172 KGGEEFAGGKAEGQDLVLGSNSMIPGFEDGLVGASAGDTKVLKLKFPKDYHAEELKGAKV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ V S +N++ G ++ R +++ VR KVK +++
Sbjct: 232 EFAVVVNSVSSKQLPEMNDEFFKLYGVDAGGLEKFREDVQNNMERELRNAVRSKVKNRVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + ++P +LV+NE + Q++ + Q ++ + A+RR
Sbjct: 292 NQLFDLNKVELPAALVDNEITQLKQQMVQQFGGGQQIDLSML-----PDDMFREKAERRA 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ I + + E+ ++ + + + K+++D++ L+ + A + E
Sbjct: 347 SLGVIVSEIVKVEELTPDEDSVRERINEIASTY-EQPKEVVDYYYSQQQLLSSVEAVVLE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
D+V + +L ++ D + +++ E
Sbjct: 406 DQVTELVLSKAKVADEECSYEDAVKPDPEPGA 437
>gi|121593620|ref|YP_985516.1| trigger factor [Acidovorax sp. JS42]
gi|222110340|ref|YP_002552604.1| trigger factor [Acidovorax ebreus TPSY]
gi|166229008|sp|A1W5B5|TIG_ACISJ RecName: Full=Trigger factor; Short=TF
gi|254788999|sp|B9MG13|TIG_DIAST RecName: Full=Trigger factor; Short=TF
gi|120605700|gb|ABM41440.1| trigger factor [Acidovorax sp. JS42]
gi|221729784|gb|ACM32604.1| trigger factor [Acidovorax ebreus TPSY]
Length = 436
Score = 257 bits (655), Expect = 4e-66, Method: Composition-based stats.
Identities = 103/449 (22%), Positives = 215/449 (47%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + R++ + + GFRPGKVP+S + YG
Sbjct: 1 MAVTVETLEKLERKITLSLPLTTIQTEVDARLKRLARTVKMDGFRPGKVPMSVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E + ++ + R A +P IT +G + ++ +++
Sbjct: 61 SVQYEVLNDKVGEAFAQAANEANLRVAGQPRITEKDGAPE---------GEVTFDAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYT 178
P+++I +V + EV + ID+ + + K F + + D+VTVD+
Sbjct: 112 FPEVKIGDLSTAEVEKLSAEVTDSAIDKTVDILRKQRRTFAQRALAAAAEDGDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + ++ QF+VG + E + + G+K+G+ K FPED+ KD+AGK
Sbjct: 172 GKIDGEPFQGGKAEDFQFLVGEGQMLKEFEDAVRGMKSGESKTFPLAFPEDYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K++ + VN LA LG + +R + +++ +F + + K+
Sbjct: 232 TADFMVTVKKIEAAHLPEVNEQLAKSLGIADGTVEGLRADIKKNLEREVKFRLLARNKQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + +K D+P + V+ E +L+ R ++ K + E + A+R
Sbjct: 292 VMDALVSKAELDLPNASVQAEIARLLEAARADLKQRGIKDADKA---EIPEDVFRPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + NN++ E++++ + + + + ++ + N LAE+ A +
Sbjct: 349 RVRLGLVVAELVRANNLQAKPEQLKAHVDELAASY-EKPEDVVRWYFSDRNRLAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V D +L ++ D+ V+FD+L +
Sbjct: 408 IENNVTDFVLGQAKVNDKAVSFDELMGQA 436
>gi|15800166|ref|NP_286178.1| trigger factor [Escherichia coli O157:H7 EDL933]
gi|15829744|ref|NP_308517.1| trigger factor [Escherichia coli O157:H7 str. Sakai]
gi|16128421|ref|NP_414970.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli str. K-12 substr. MG1655]
gi|24111820|ref|NP_706330.1| trigger factor [Shigella flexneri 2a str. 301]
gi|30061938|ref|NP_836109.1| trigger factor [Shigella flexneri 2a str. 2457T]
gi|74311011|ref|YP_309430.1| trigger factor [Shigella sonnei Ss046]
gi|89107306|ref|AP_001086.1| peptidyl-prolyl cis/trans isomerase [Escherichia coli str. K-12
substr. W3110]
gi|110804464|ref|YP_687984.1| trigger factor [Shigella flexneri 5 str. 8401]
gi|157159963|ref|YP_001457281.1| trigger factor [Escherichia coli HS]
gi|168754540|ref|ZP_02779547.1| trigger factor [Escherichia coli O157:H7 str. EC4401]
gi|168765382|ref|ZP_02790389.1| trigger factor [Escherichia coli O157:H7 str. EC4501]
gi|168768390|ref|ZP_02793397.1| trigger factor [Escherichia coli O157:H7 str. EC4486]
gi|168786286|ref|ZP_02811293.1| trigger factor [Escherichia coli O157:H7 str. EC869]
gi|170021191|ref|YP_001726145.1| trigger factor [Escherichia coli ATCC 8739]
gi|170080022|ref|YP_001729342.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli str. K-12 substr. DH10B]
gi|170682129|ref|YP_001742580.1| trigger factor [Escherichia coli SMS-3-5]
gi|188496163|ref|ZP_03003433.1| trigger factor [Escherichia coli 53638]
gi|194430599|ref|ZP_03063057.1| trigger factor [Escherichia coli B171]
gi|194440213|ref|ZP_03072249.1| trigger factor [Escherichia coli 101-1]
gi|195938497|ref|ZP_03083879.1| trigger factor [Escherichia coli O157:H7 str. EC4024]
gi|208815321|ref|ZP_03256500.1| trigger factor [Escherichia coli O157:H7 str. EC4045]
gi|208823010|ref|ZP_03263328.1| trigger factor [Escherichia coli O157:H7 str. EC4042]
gi|209397116|ref|YP_002269084.1| trigger factor [Escherichia coli O157:H7 str. EC4115]
gi|215485517|ref|YP_002327948.1| trigger factor [Escherichia coli O127:H6 str. E2348/69]
gi|217324372|ref|ZP_03440456.1| trigger factor [Escherichia coli O157:H7 str. TW14588]
gi|218553003|ref|YP_002385916.1| trigger factor [Escherichia coli IAI1]
gi|218688300|ref|YP_002396512.1| trigger factor [Escherichia coli ED1a]
gi|218693899|ref|YP_002401566.1| trigger factor [Escherichia coli 55989]
gi|218698652|ref|YP_002406281.1| trigger factor [Escherichia coli IAI39]
gi|218703720|ref|YP_002411239.1| trigger factor [Escherichia coli UMN026]
gi|238899724|ref|YP_002925520.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli BW2952]
gi|253774575|ref|YP_003037406.1| trigger factor [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254791620|ref|YP_003076457.1| trigger factor [Escherichia coli O157:H7 str. TW14359]
gi|256023946|ref|ZP_05437811.1| trigger factor [Escherichia sp. 4_1_40B]
gi|260842637|ref|YP_003220415.1| peptidyl-prolyl cis/trans isomerase [Escherichia coli O103:H2 str.
12009]
gi|260866597|ref|YP_003232999.1| peptidyl-prolyl cis/trans isomerase [Escherichia coli O111:H- str.
11128]
gi|261223918|ref|ZP_05938199.1| trigger factor [Escherichia coli O157:H7 str. FRIK2000]
gi|261256368|ref|ZP_05948901.1| trigger factor [Escherichia coli O157:H7 str. FRIK966]
gi|291281343|ref|YP_003498161.1| Trigger factor [Escherichia coli O55:H7 str. CB9615]
gi|293403557|ref|ZP_06647648.1| trigger factor [Escherichia coli FVEC1412]
gi|293408586|ref|ZP_06652425.1| trigger factor tig [Escherichia coli B354]
gi|293413692|ref|ZP_06656341.1| trigger factor tig [Escherichia coli B185]
gi|293418506|ref|ZP_06660941.1| trigger factor tig [Escherichia coli B088]
gi|298379169|ref|ZP_06989050.1| trigger factor [Escherichia coli FVEC1302]
gi|300818233|ref|ZP_07098444.1| trigger factor [Escherichia coli MS 107-1]
gi|300820320|ref|ZP_07100472.1| trigger factor [Escherichia coli MS 119-7]
gi|300900506|ref|ZP_07118673.1| trigger factor [Escherichia coli MS 198-1]
gi|300903297|ref|ZP_07121225.1| trigger factor [Escherichia coli MS 84-1]
gi|300918182|ref|ZP_07134789.1| trigger factor [Escherichia coli MS 115-1]
gi|300924162|ref|ZP_07140154.1| trigger factor [Escherichia coli MS 182-1]
gi|300930262|ref|ZP_07145675.1| trigger factor [Escherichia coli MS 187-1]
gi|300947912|ref|ZP_07162060.1| trigger factor [Escherichia coli MS 116-1]
gi|300958003|ref|ZP_07170167.1| trigger factor [Escherichia coli MS 175-1]
gi|301022571|ref|ZP_07186443.1| trigger factor [Escherichia coli MS 69-1]
gi|301025669|ref|ZP_07189187.1| trigger factor [Escherichia coli MS 196-1]
gi|301301586|ref|ZP_07207721.1| trigger factor [Escherichia coli MS 124-1]
gi|301330698|ref|ZP_07223300.1| trigger factor [Escherichia coli MS 78-1]
gi|301647361|ref|ZP_07247173.1| trigger factor [Escherichia coli MS 146-1]
gi|307137080|ref|ZP_07496436.1| trigger factor [Escherichia coli H736]
gi|307312186|ref|ZP_07591822.1| trigger factor [Escherichia coli W]
gi|309794832|ref|ZP_07689253.1| trigger factor [Escherichia coli MS 145-7]
gi|312964539|ref|ZP_07778795.1| trigger factor [Escherichia coli 2362-75]
gi|312970532|ref|ZP_07784713.1| trigger factor [Escherichia coli 1827-70]
gi|331640956|ref|ZP_08342091.1| trigger factor [Escherichia coli H736]
gi|331651374|ref|ZP_08352399.1| trigger factor [Escherichia coli M718]
gi|331661817|ref|ZP_08362740.1| trigger factor [Escherichia coli TA143]
gi|331666791|ref|ZP_08367665.1| trigger factor [Escherichia coli TA271]
gi|331676108|ref|ZP_08376820.1| trigger factor [Escherichia coli H591]
gi|331681831|ref|ZP_08382464.1| trigger factor [Escherichia coli H299]
gi|67473482|sp|P0A850|TIG_ECOLI RecName: Full=Trigger factor; Short=TF
gi|67473485|sp|P0A851|TIG_ECO57 RecName: Full=Trigger factor; Short=TF
gi|67473486|sp|P0A852|TIG_SHIFL RecName: Full=Trigger factor; Short=TF
gi|119370936|sp|Q3Z4W7|TIG_SHISS RecName: Full=Trigger factor; Short=TF
gi|123343103|sp|Q0T7E7|TIG_SHIF8 RecName: Full=Trigger factor; Short=TF
gi|166988050|sp|A7ZX94|TIG_ECOHS RecName: Full=Trigger factor; Short=TF
gi|189035937|sp|B1J012|TIG_ECOLC RecName: Full=Trigger factor; Short=TF
gi|226695524|sp|B7NJ58|TIG_ECO7I RecName: Full=Trigger factor; Short=TF
gi|226695525|sp|B7M3S9|TIG_ECO8A RecName: Full=Trigger factor; Short=TF
gi|226695526|sp|B7N8Z0|TIG_ECOLU RecName: Full=Trigger factor; Short=TF
gi|226695527|sp|B1LJJ3|TIG_ECOSM RecName: Full=Trigger factor; Short=TF
gi|226738679|sp|B5Z3U4|TIG_ECO5E RecName: Full=Trigger factor; Short=TF
gi|229558044|sp|B1XFM4|TIG_ECODH RecName: Full=Trigger factor; Short=TF
gi|254789000|sp|B7UJQ9|TIG_ECO27 RecName: Full=Trigger factor; Short=TF
gi|254789001|sp|B7L673|TIG_ECO55 RecName: Full=Trigger factor; Short=TF
gi|254789002|sp|B7MQF2|TIG_ECO81 RecName: Full=Trigger factor; Short=TF
gi|259533599|sp|C4ZTJ3|TIG_ECOBW RecName: Full=Trigger factor; Short=TF
gi|12513298|gb|AAG54786.1|AE005223_1 trigger factor; a molecular chaperone involved in cell division
[Escherichia coli O157:H7 str. EDL933]
gi|1773120|gb|AAB40192.1| trigger factor [Escherichia coli]
gi|1786640|gb|AAC73539.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli str. K-12 substr. MG1655]
gi|13359947|dbj|BAB33913.1| trigger factor [Escherichia coli O157:H7 str. Sakai]
gi|24050611|gb|AAN42037.1| trigger factor [Shigella flexneri 2a str. 301]
gi|30040182|gb|AAP15915.1| trigger factor [Shigella flexneri 2a str. 2457T]
gi|73854488|gb|AAZ87195.1| trigger factor [Shigella sonnei Ss046]
gi|85674576|dbj|BAE76216.1| peptidyl-prolyl cis/trans isomerase [Escherichia coli str. K12
substr. W3110]
gi|110614012|gb|ABF02679.1| trigger factor [Shigella flexneri 5 str. 8401]
gi|157065643|gb|ABV04898.1| trigger factor [Escherichia coli HS]
gi|169756119|gb|ACA78818.1| trigger factor [Escherichia coli ATCC 8739]
gi|169887857|gb|ACB01564.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli str. K-12 substr. DH10B]
gi|170519847|gb|ACB18025.1| trigger factor [Escherichia coli SMS-3-5]
gi|188491362|gb|EDU66465.1| trigger factor [Escherichia coli 53638]
gi|189357974|gb|EDU76393.1| trigger factor [Escherichia coli O157:H7 str. EC4401]
gi|189362496|gb|EDU80915.1| trigger factor [Escherichia coli O157:H7 str. EC4486]
gi|189364877|gb|EDU83293.1| trigger factor [Escherichia coli O157:H7 str. EC4501]
gi|189373643|gb|EDU92059.1| trigger factor [Escherichia coli O157:H7 str. EC869]
gi|194411356|gb|EDX27720.1| trigger factor [Escherichia coli B171]
gi|194420852|gb|EDX36903.1| trigger factor [Escherichia coli 101-1]
gi|208731969|gb|EDZ80657.1| trigger factor [Escherichia coli O157:H7 str. EC4045]
gi|208737203|gb|EDZ84887.1| trigger factor [Escherichia coli O157:H7 str. EC4042]
gi|209158516|gb|ACI35949.1| trigger factor [Escherichia coli O157:H7 str. EC4115]
gi|209743864|gb|ACI70239.1| trigger factor [Escherichia coli]
gi|209743866|gb|ACI70240.1| trigger factor [Escherichia coli]
gi|209743868|gb|ACI70241.1| trigger factor [Escherichia coli]
gi|209743870|gb|ACI70242.1| trigger factor [Escherichia coli]
gi|209743872|gb|ACI70243.1| trigger factor [Escherichia coli]
gi|215263589|emb|CAS07919.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli O127:H6 str. E2348/69]
gi|217320593|gb|EEC29017.1| trigger factor [Escherichia coli O157:H7 str. TW14588]
gi|218350631|emb|CAU96323.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli 55989]
gi|218359771|emb|CAQ97312.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli IAI1]
gi|218368638|emb|CAR16377.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli IAI39]
gi|218425864|emb|CAR06670.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli ED1a]
gi|218430817|emb|CAR11691.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli UMN026]
gi|238861989|gb|ACR63987.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli BW2952]
gi|242376217|emb|CAQ30908.1| trigger factor; a molecular chaperone involved in cell division
[Escherichia coli BL21(DE3)]
gi|253325619|gb|ACT30221.1| trigger factor [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253976616|gb|ACT42286.1| trigger factor [Escherichia coli BL21(DE3)]
gi|254591020|gb|ACT70381.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli O157:H7 str. TW14359]
gi|257757784|dbj|BAI29281.1| peptidyl-prolyl cis/trans isomerase [Escherichia coli O103:H2 str.
12009]
gi|257762953|dbj|BAI34448.1| peptidyl-prolyl cis/trans isomerase [Escherichia coli O111:H- str.
11128]
gi|260450377|gb|ACX40799.1| trigger factor [Escherichia coli DH1]
gi|281599776|gb|ADA72760.1| Trigger factor [Shigella flexneri 2002017]
gi|284920246|emb|CBG33305.1| trigger factor [Escherichia coli 042]
gi|290761216|gb|ADD55177.1| Trigger factor [Escherichia coli O55:H7 str. CB9615]
gi|291325034|gb|EFE64449.1| trigger factor tig [Escherichia coli B088]
gi|291429410|gb|EFF02430.1| trigger factor [Escherichia coli FVEC1412]
gi|291433750|gb|EFF06723.1| trigger factor tig [Escherichia coli B185]
gi|291471764|gb|EFF14247.1| trigger factor tig [Escherichia coli B354]
gi|298280282|gb|EFI21786.1| trigger factor [Escherichia coli FVEC1302]
gi|299880023|gb|EFI88234.1| trigger factor [Escherichia coli MS 196-1]
gi|300315270|gb|EFJ65054.1| trigger factor [Escherichia coli MS 175-1]
gi|300355987|gb|EFJ71857.1| trigger factor [Escherichia coli MS 198-1]
gi|300397452|gb|EFJ80990.1| trigger factor [Escherichia coli MS 69-1]
gi|300404592|gb|EFJ88130.1| trigger factor [Escherichia coli MS 84-1]
gi|300414633|gb|EFJ97943.1| trigger factor [Escherichia coli MS 115-1]
gi|300419615|gb|EFK02926.1| trigger factor [Escherichia coli MS 182-1]
gi|300452512|gb|EFK16132.1| trigger factor [Escherichia coli MS 116-1]
gi|300461834|gb|EFK25327.1| trigger factor [Escherichia coli MS 187-1]
gi|300527105|gb|EFK48174.1| trigger factor [Escherichia coli MS 119-7]
gi|300529124|gb|EFK50186.1| trigger factor [Escherichia coli MS 107-1]
gi|300843083|gb|EFK70843.1| trigger factor [Escherichia coli MS 124-1]
gi|300843359|gb|EFK71119.1| trigger factor [Escherichia coli MS 78-1]
gi|301074506|gb|EFK89312.1| trigger factor [Escherichia coli MS 146-1]
gi|306907688|gb|EFN38190.1| trigger factor [Escherichia coli W]
gi|308121485|gb|EFO58747.1| trigger factor [Escherichia coli MS 145-7]
gi|309700697|emb|CBI99993.1| trigger factor [Escherichia coli ETEC H10407]
gi|310337181|gb|EFQ02319.1| trigger factor [Escherichia coli 1827-70]
gi|312290773|gb|EFR18650.1| trigger factor [Escherichia coli 2362-75]
gi|313646937|gb|EFS11394.1| trigger factor [Shigella flexneri 2a str. 2457T]
gi|315059716|gb|ADT74043.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli W]
gi|315135118|dbj|BAJ42277.1| trigger factor [Escherichia coli DH1]
gi|315256263|gb|EFU36231.1| trigger factor [Escherichia coli MS 85-1]
gi|315299559|gb|EFU58807.1| trigger factor [Escherichia coli MS 16-3]
gi|315616623|gb|EFU97240.1| trigger factor [Escherichia coli 3431]
gi|320192852|gb|EFW67492.1| Cell division trigger factor [Escherichia coli O157:H7 str. EC1212]
gi|320197090|gb|EFW71709.1| Cell division trigger factor [Escherichia coli WV_060327]
gi|320638431|gb|EFX08145.1| trigger factor [Escherichia coli O157:H7 str. G5101]
gi|320643811|gb|EFX12934.1| trigger factor [Escherichia coli O157:H- str. 493-89]
gi|320649162|gb|EFX17740.1| trigger factor [Escherichia coli O157:H- str. H 2687]
gi|320656055|gb|EFX23971.1| trigger factor [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320661205|gb|EFX28636.1| trigger factor [Escherichia coli O55:H7 str. USDA 5905]
gi|320665181|gb|EFX32274.1| trigger factor [Escherichia coli O157:H7 str. LSU-61]
gi|323160453|gb|EFZ46401.1| trigger factor [Escherichia coli E128010]
gi|323170522|gb|EFZ56172.1| trigger factor [Escherichia coli LT-68]
gi|323178295|gb|EFZ63873.1| trigger factor [Escherichia coli 1180]
gi|323191356|gb|EFZ76619.1| trigger factor [Escherichia coli RN587/1]
gi|323379719|gb|ADX51987.1| trigger factor [Escherichia coli KO11]
gi|323938622|gb|EGB34871.1| hypothetical protein ERCG_00224 [Escherichia coli E1520]
gi|323943243|gb|EGB39399.1| hypothetical protein ERDG_00213 [Escherichia coli E482]
gi|323945341|gb|EGB41397.1| hypothetical protein EREG_03112 [Escherichia coli H120]
gi|323963426|gb|EGB58988.1| hypothetical protein ERGG_00194 [Escherichia coli H489]
gi|323965123|gb|EGB60582.1| hypothetical protein ERJG_03481 [Escherichia coli M863]
gi|323972290|gb|EGB67500.1| hypothetical protein ERHG_01725 [Escherichia coli TA007]
gi|323976079|gb|EGB71172.1| hypothetical protein ERFG_03011 [Escherichia coli TW10509]
gi|324116924|gb|EGC10837.1| hypothetical protein ERBG_03153 [Escherichia coli E1167]
gi|326341200|gb|EGD64992.1| Cell division trigger factor [Escherichia coli O157:H7 str. 1044]
gi|326346025|gb|EGD69764.1| Cell division trigger factor [Escherichia coli O157:H7 str. 1125]
gi|327254764|gb|EGE66380.1| trigger factor [Escherichia coli STEC_7v]
gi|331037754|gb|EGI09974.1| trigger factor [Escherichia coli H736]
gi|331051115|gb|EGI23167.1| trigger factor [Escherichia coli M718]
gi|331060239|gb|EGI32203.1| trigger factor [Escherichia coli TA143]
gi|331066015|gb|EGI37899.1| trigger factor [Escherichia coli TA271]
gi|331076166|gb|EGI47448.1| trigger factor [Escherichia coli H591]
gi|331081033|gb|EGI52198.1| trigger factor [Escherichia coli H299]
gi|332085871|gb|EGI91035.1| trigger factor [Shigella dysenteriae 155-74]
gi|332094592|gb|EGI99638.1| trigger factor [Shigella boydii 5216-82]
gi|332341800|gb|AEE55134.1| trigger factor [Escherichia coli UMNK88]
gi|332760727|gb|EGJ91015.1| trigger factor [Shigella flexneri 4343-70]
gi|332761535|gb|EGJ91817.1| trigger factor [Shigella flexneri 2747-71]
gi|332768357|gb|EGJ98541.1| trigger factor [Shigella flexneri 2930-71]
gi|333008122|gb|EGK27597.1| trigger factor [Shigella flexneri VA-6]
gi|333010897|gb|EGK30323.1| trigger factor [Shigella flexneri K-272]
gi|333020698|gb|EGK39958.1| trigger factor [Shigella flexneri K-227]
Length = 432
Score = 257 bits (655), Expect = 4e-66, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|26246446|ref|NP_752485.1| trigger factor [Escherichia coli CFT073]
gi|110640697|ref|YP_668425.1| trigger factor [Escherichia coli 536]
gi|227884553|ref|ZP_04002358.1| trigger factor [Escherichia coli 83972]
gi|300988010|ref|ZP_07178490.1| trigger factor [Escherichia coli MS 45-1]
gi|300997376|ref|ZP_07181716.1| trigger factor [Escherichia coli MS 200-1]
gi|306813097|ref|ZP_07447290.1| trigger factor [Escherichia coli NC101]
gi|331645612|ref|ZP_08346716.1| trigger factor [Escherichia coli M605]
gi|331656493|ref|ZP_08357455.1| trigger factor [Escherichia coli TA206]
gi|31563052|sp|Q8FKA7|TIG_ECOL6 RecName: Full=Trigger factor; Short=TF
gi|118574070|sp|Q0TKK5|TIG_ECOL5 RecName: Full=Trigger factor; Short=TF
gi|26106844|gb|AAN79029.1|AE016756_212 Trigger factor [Escherichia coli CFT073]
gi|110342289|gb|ABG68526.1| trigger factor [Escherichia coli 536]
gi|222032231|emb|CAP74970.1| Trigger factor [Escherichia coli LF82]
gi|227838639|gb|EEJ49105.1| trigger factor [Escherichia coli 83972]
gi|281177607|dbj|BAI53937.1| trigger factor [Escherichia coli SE15]
gi|300304195|gb|EFJ58715.1| trigger factor [Escherichia coli MS 200-1]
gi|300407562|gb|EFJ91100.1| trigger factor [Escherichia coli MS 45-1]
gi|305853860|gb|EFM54299.1| trigger factor [Escherichia coli NC101]
gi|307552343|gb|ADN45118.1| trigger factor [Escherichia coli ABU 83972]
gi|312945014|gb|ADR25841.1| trigger factor [Escherichia coli O83:H1 str. NRG 857C]
gi|315294231|gb|EFU53582.1| trigger factor [Escherichia coli MS 153-1]
gi|324010067|gb|EGB79286.1| trigger factor [Escherichia coli MS 57-2]
gi|324010649|gb|EGB79868.1| trigger factor [Escherichia coli MS 60-1]
gi|330910230|gb|EGH38740.1| cell division trigger factor [Escherichia coli AA86]
gi|331045774|gb|EGI17900.1| trigger factor [Escherichia coli M605]
gi|331054741|gb|EGI26750.1| trigger factor [Escherichia coli TA206]
Length = 432
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTEEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|212636028|ref|YP_002312553.1| trigger factor [Shewanella piezotolerans WP3]
gi|212557512|gb|ACJ29966.1| Trigger factor [Shewanella piezotolerans WP3]
Length = 451
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 99/448 (22%), Positives = 209/448 (46%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ ++ E ++ +A I GFRPGKVP+S I YGK
Sbjct: 18 MQVSVETTQGLERRLTISVPAEQIENTVKEALKSEAKRARIPGFRPGKVPVSVINKRYGK 77
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + E+++ E + A P+ + +++I
Sbjct: 78 AIRQDITGEVMQRNFVEAIIAEKLNPAGAPTFVPGTT----------EGESFEFVATFEI 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + + V Q EV E ++D + + + +FEV E + GDK +++ S
Sbjct: 128 YPEVELKGLESIAVEQPKAEVTEADVDAMIETLRNQHASFEVVERAAAEGDKAKINFVGS 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + +GS + + G K G++ EIE FPED+ ++L GK
Sbjct: 188 VDGEEFEGGKADDFELQLGSGRMIPGFESGVEGHKAGEEFEIEVTFPEDYHAENLKGKAA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV VN++ A G A+R S+ + + E ++ VK Q+L
Sbjct: 248 KFVITLTEVQGADLPEVNDEFATLFGVNEGGIDALRAEISKNMGRELEQALKANVKEQVL 307
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + ++P++L+E E + ++ S+ E + A+RRV
Sbjct: 308 NGLVEQNALELPKALIEGEVEVLRKQAMQRFGDQ------AASMPELPADLFTEQAERRV 361
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + + ++ +E +Q + + +++ ++ + +R E
Sbjct: 362 KVGLLLGEVIKTSELKAEDERVQGLIASMASAY-EDPSEVVAYYNGNEELMQNMRNVALE 420
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LK+ + +++V F++ + ++
Sbjct: 421 EQAVEELLKTATLTEKEVNFEEFMNKAT 448
>gi|67461769|sp|Q6LNV9|TIG_PHOPR RecName: Full=Trigger factor; Short=TF
Length = 433
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 86/449 (19%), Positives = 209/449 (46%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL+R L + +P+ + ++ ++ I GFRPGK P+ + ++G
Sbjct: 1 MQVTVETTEGLERHLTITVPAANIENAVTAELKKIAKNRRFDGFRPGKAPMKMVARMFGG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E+++ E + K A P+ T + I DL + S+++
Sbjct: 61 SVRQDILGEVMQRHFIEAIVKEKINPAGAPTFTPVD---------IAEGKDLVFKASFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I ++ D + V + EV ++++ + + K + + +E +VT+D+ S
Sbjct: 112 FPEIVLAGLDQIAVEKPAVEVKDEDVTNMLDTLRKQQATWSDVDAAAEADSRVTIDFIGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + + +VG K G++ +E FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKAEGFALAMGQNRMIPGFEDSIVGKKAGEEFTLEVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +V + + + + G ++ + +++ + V+ ++K Q+L
Sbjct: 232 SFAITLHKVEAQELPELTEEFIAKFGVLDGSIEGLKTEVRKNMERELKQAVKGRIKEQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +VP +L++ E N + Q+ + + E + + AKRRV
Sbjct: 292 DGLVEQNDINVPAALIDQEINVLRQQAAQRFGG------DAKNTPELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++G + + ++ E+ +++ + + + +++ ++++ ++ +R E
Sbjct: 346 VVGLLIGEVIKTEELKADEDRVKAIITEMASAY-EDPTEVVSYYEQNEKMMSNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ ID +L Q+ +++V F+ L + +
Sbjct: 405 EQAIDALLAKAQVTEKEVGFNDLMNQPAA 433
>gi|170727454|ref|YP_001761480.1| trigger factor [Shewanella woodyi ATCC 51908]
gi|238688692|sp|B1KLT8|TIG_SHEWM RecName: Full=Trigger factor; Short=TF
gi|169812801|gb|ACA87385.1| trigger factor [Shewanella woodyi ATCC 51908]
Length = 434
Score = 256 bits (654), Expect = 4e-66, Method: Composition-based stats.
Identities = 96/450 (21%), Positives = 214/450 (47%), Gaps = 19/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + N+ +++ +A I GFRPGKVP+S I YGK
Sbjct: 1 MQVSVETTQGLERRLTISVPAEQIEKAVNDSLKNEAKRARIPGFRPGKVPVSVINKRYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + E+++ E + A P+ E + + +++I
Sbjct: 61 AIRQDITGEVMQRNFVEAIIAEKLNPAGAPTFVPGE----------SDAENFQFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +D+ V Q +V + ++D + + K + +E E + GDK +++ S
Sbjct: 111 YPEVELKGLEDIAVEQPTSDVTDADVDTMIETLRKQHATYEAVERAAADGDKAKINFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ + +GS + + G K G++ +IE FPED+ ++L GK
Sbjct: 171 IDGEEFEGGKAEDFELQLGSGRMIPGFESGVEGHKAGEEFDIEVTFPEDYHAENLKGKVA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ S+ + + E ++ VK Q+L
Sbjct: 231 KFAITLNEVQAANLPEVNDEFATLFGVAEGGLEALKAEISKNMGRELEQALKANVKEQVL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + ++P SL+ E + ++ ++ E + A+RRV
Sbjct: 291 NGLLEQNEIELPASLIAGEVEVLRKQAMQRFGDQ------AANMPELPADLFTEQAERRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ EE +Q + + ++++++ + +R E
Sbjct: 345 KVGLLLGEVIKTNELKAEEERVQGLIASMASAY-EDPSEVVEYYNGNQEMMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +LK+ ++ ++ V F++ + +++
Sbjct: 404 EQAVEALLKTAKVTEKAVNFEEFMNKATQQ 433
>gi|222085803|ref|YP_002544333.1| trigger factor protein [Agrobacterium radiobacter K84]
gi|254788979|sp|B9JEI6|TIG_AGRRK RecName: Full=Trigger factor; Short=TF
gi|221723251|gb|ACM26407.1| trigger factor protein [Agrobacterium radiobacter K84]
Length = 495
Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats.
Identities = 175/449 (38%), Positives = 289/449 (64%), Gaps = 1/449 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKRE+ V+I + + NER+ +++ K I GFRPGKVP+SH+K +YGK
Sbjct: 1 MQVIETLAEGLKREIKVVISAKDMEGRMNERLAEVKDKVRINGFRPGKVPVSHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+++ ++EI+++ P IL++R E++A +P + + E + D ++ D + LSY++
Sbjct: 61 SIMADLVNEIVRDQPPAILTERGEKSATQPEVAMTE-DKDEAEKILAAEADFEFTLSYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P IE+ S ++VT+++ E+ E E+ Q+ +IA++ ++E K+ ++ GD+VT+DY
Sbjct: 120 IPAIELKSVKGVKVTREVAEIGEDEVTEQILKIAESARSYEAKKGKAADGDRVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD V + ++ Q ++GS E LVG+K GD+K I FP ++ K+LAGK+
Sbjct: 180 VDGVAFDGGKDEDSQLVIGSNRFIPGFEEQLVGVKAGDEKTITVTFPAEYPAKNLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV +P V +N++LA +LG ES ++ + +I+ + RQKVKRQILD
Sbjct: 240 TFDITVKEVAAPGEVEINDELASKLGLESADRLKEIVRGQIESQYGSVTRQKVKRQILDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y FD P+ LV+ E+ I ++++ +++ + + ++ D+ +E+ + Y LA+RRV
Sbjct: 300 LDEMYQFDTPQKLVDAEFASIWRQIQTDLAESGKTFEDEDTTEEKAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EV+E+E+Q ALY QL +FPG EK++LD F+ P A A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVSEDELQRALYAQLQQFPGQEKEILDFFRNTPGASANLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESS 449
VIDH+L V + D+ V+ + L +
Sbjct: 420 VIDHLLTEVDVTDKTVSKEALLADDESED 448
>gi|260853659|ref|YP_003227550.1| peptidyl-prolyl cis/trans isomerase [Escherichia coli O26:H11 str.
11368]
gi|257752308|dbj|BAI23810.1| peptidyl-prolyl cis/trans isomerase [Escherichia coli O26:H11 str.
11368]
Length = 432
Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ KA I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKARIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|293391880|ref|ZP_06636214.1| trigger factor [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290952414|gb|EFE02533.1| trigger factor [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 432
Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 218/448 (48%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + V +P+ + + E ++ + A + GFR GKVP I+ +G
Sbjct: 1 MSLNIETTQGLERRVTVTVPAETVDQAVREELKRVAKNARVDGFRKGKVPPQIIEKRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++++ + + + A RPS T+ + E +LK ++++
Sbjct: 61 SVRQDILGDLLQKHFFQAVIENKVNLAGRPSFTVEQ---------FEDGKELKFSATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K + + ++ D+VT+D+ S
Sbjct: 112 YPEVELKGLENIKVEKPVVEISEADVDKMVDVLRKQQATWSETQEAAKAEDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E ++ +G + + +VG K GD+ I+ FPE++ + L GK
Sbjct: 172 VDGEEFEGGKAEDFVLFMGQGRMIPGFEDGIVGHKAGDKFTIDVTFPEEYHSEKLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K+V + + ++ + G ++S +R + +++ + + +VK Q++
Sbjct: 232 KFDITLKKVEVMVLPELTDEFVAKFGPNTKSVADLRSEIRKNMQRELKNALTTRVKTQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP + VE E + + Q+ N + + + + AKRRV
Sbjct: 292 DGLVEQNQIDVPSAAVEQEIDVLRQQAAQRFGG------NAQQVAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
L G++L + N ++ EE ++ + + +++++ K + +R + E
Sbjct: 346 LVGLLLAQVIASNELKADEERAKTMIEDIASAY-EQPADVIEYYSKNNELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ TFD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKAATFDEIMNPQA 432
>gi|152968971|ref|YP_001334080.1| trigger factor [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238893385|ref|YP_002918119.1| trigger factor [Klebsiella pneumoniae NTUH-K2044]
gi|330011532|ref|ZP_08307118.1| trigger factor [Klebsiella sp. MS 92-3]
gi|166229895|sp|A6T5H9|TIG_KLEP7 RecName: Full=Trigger factor; Short=TF
gi|150953820|gb|ABR75850.1| trigger factor [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238545701|dbj|BAH62052.1| trigger factor [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|328534149|gb|EGF60784.1| trigger factor [Klebsiella sp. MS 92-3]
Length = 432
Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + ++ + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIENAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRHFVDAIIKEKINPAGAPN---------YVPGEYKLGEDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + EV + ++D + + K ++ KE + D+VT+D+T S
Sbjct: 112 YPEVELQGLDAIEVEKPVVEVTDADVDTMLETLRKQQATWKEKEGAVDAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANEIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE +++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKALIEEMASAY-EDPSEVVEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVSEKATSFNELMNQQA 432
>gi|315633751|ref|ZP_07889041.1| trigger factor [Aggregatibacter segnis ATCC 33393]
gi|315477793|gb|EFU68535.1| trigger factor [Aggregatibacter segnis ATCC 33393]
Length = 432
Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 218/448 (48%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ + + E ++ + A + GFR GKVP I+ +G
Sbjct: 1 MSLNIETTQGLERRVTITVPAETVVQAIREELKRVAKNARVDGFRKGKVPPHIIEKRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ + + + A RPS T+ + E +LK ++++
Sbjct: 61 SVRQDILGDLLQNHFFQAVIENKINLAGRPSFTVEQ---------FEEGKELKFSATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + I E+ E ++D+ + + K + + ++ D+VT+D+ S
Sbjct: 112 YPEVELKGLENIKVEKPIVEISEADVDKMVEVLRKQQATWTESQDAAKAEDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K GD+ I+ FPE++ +++L GK
Sbjct: 172 VDGEEFEGGKASDFVLFMGQGRMIPGFEEGIVGHKAGDKFTIDVTFPEEYHVENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K+V + + ++ + G ++S +R + +++ + + +VK Q++
Sbjct: 232 KFDITLKKVEVMVLPELTDEFVAKFGPNTKSVADLRNEIRKNMQRELKNALTTRVKTQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP S VE E + + Q+ N + + + AKRRV
Sbjct: 292 DGLVQQNQIDVPSSAVEQEIDVLRQQAAQRFGG------NAQQAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
L G++L + N ++ EE ++ + + + +++++ K + +R + E
Sbjct: 346 LVGLLLAQVIASNELKADEERAKAMIEEIASAY-EQPADVVEYYSKNNELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ TFD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKAATFDEIMNPQA 432
>gi|113970831|ref|YP_734624.1| trigger factor [Shewanella sp. MR-4]
gi|114048056|ref|YP_738606.1| trigger factor [Shewanella sp. MR-7]
gi|122943715|sp|Q0HHA0|TIG_SHESM RecName: Full=Trigger factor; Short=TF
gi|123030491|sp|Q0HTK6|TIG_SHESR RecName: Full=Trigger factor; Short=TF
gi|113885515|gb|ABI39567.1| trigger factor [Shewanella sp. MR-4]
gi|113889498|gb|ABI43549.1| trigger factor [Shewanella sp. MR-7]
Length = 434
Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 209/448 (46%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + ++ +A I GFRPGKVP++ I YG
Sbjct: 1 MQVSVEATQGLERRLTISVPAEQIEKLVKDSLQREAKRARIPGFRPGKVPVTVINKRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + E+++ E + A P+ + +++I
Sbjct: 61 AIRQDITGEVMQRNFIEAIIAEKLNPAGAPTFVPGAT----------DGEKFEFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V Q V + ++D + + K + F E E+ GDKV +++ S
Sbjct: 111 YPEVELKGLDAIEVEQPKASVTDADVDSMIETLRKQHATFAAVEREAADGDKVKMNFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD V E + + +GS + ++G K G++ I+ FPE++ ++L GK
Sbjct: 171 VDGVEFEGGKADDFELQLGSGRMIPGFEAGILGHKAGEEFVIDVTFPEEYHAENLKGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ + + + E ++ VK Q++
Sbjct: 231 KFAITLTEVLAANLPEVNDEFAALFGISEGGLEALKTEIRKNMNRELEQALKANVKEQVI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++P++L++ E N + Q+ ++ E + + A RRV
Sbjct: 291 NGLLANNDIELPKALIDGEVNVLRQQAMQRFGGQ------TANMPELPAELFTEQAARRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E +Q+ + + +++ ++ + +R E
Sbjct: 345 KIGLLLGEVIKTNELKAEDERVQALIASMASAY-EDPSEVVAYYNSNKELMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LKS ++ +++V F++ + ++
Sbjct: 404 EQAVEALLKSAKVTEKEVAFEEFMNKAT 431
>gi|300715590|ref|YP_003740393.1| hypothetical protein EbC_10070 [Erwinia billingiae Eb661]
gi|299061426|emb|CAX58538.1| uncharacterized protein [Erwinia billingiae Eb661]
Length = 434
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 88/450 (19%), Positives = 201/450 (44%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + ++GL R + + + + + ++ + + K I GFR GKVP++ + YG
Sbjct: 1 MQASVETTQGLGRRVTITVAKDVIENAVKSELVSVSKKVRIDGFRKGKVPMTVVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E+++ + + K A P G + D + +++
Sbjct: 61 SVRQDVLGELMQRNFVDAIIKEKINPAGAPK---------YVPGEYKEGEDFTFAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + EV + ++D + + K ++ + +E D+ TVD++ S
Sbjct: 112 YPEVELKGLDAIEVEKPVVEVTDADVDTMLDTLRKQQATWKETDRAAEAEDRATVDFSGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+ I+ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGVVGHKAGETFTIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K+V + R G E +R + +++ + VR +VK Q +
Sbjct: 232 KFEIVLKKVEERELPEFTAEFIKRFGVEDGSVDGLRAEVRKNMERELKGAVRNRVKTQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E + + ++ N E + + AKRRV
Sbjct: 292 DGLVSANDIDVPVALIDGEIDVLRRQAAQRFGG------NEKQAFELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ E+ ++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEDRVKELIEEMASAY-EDPSEVVEFYSKNNELMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ++ +L+ ++ ++ F +L + + +
Sbjct: 405 EQAVEAVLEKAKVTEKATNFQELMNQAQPA 434
>gi|260583376|ref|ZP_05851147.1| trigger factor [Haemophilus influenzae NT127]
gi|260093581|gb|EEW77498.1| trigger factor [Haemophilus influenzae NT127]
Length = 432
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 82/448 (18%), Positives = 206/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAVREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + + D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVVKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K++ + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKIENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S VE+E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPASAVEDEINVLRNQAAQRFGG------NAQQTAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADEERAKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L + ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAHVTEKVSSFDEIMNPQA 432
>gi|77360987|ref|YP_340562.1| trigger factor [Pseudoalteromonas haloplanktis TAC125]
gi|119370920|sp|Q3IF53|TIG_PSEHT RecName: Full=Trigger factor; Short=TF
gi|76875898|emb|CAI87119.1| peptidyl-prolyl cis/trans isomerase (trigger factor), molecular
chaperone involved in cell division [Pseudoalteromonas
haloplanktis TAC125]
Length = 434
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 87/447 (19%), Positives = 207/447 (46%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ + + +R++ + I GFR GKVP S I +G
Sbjct: 1 MQVSVETTQGLERRLTITVPAENVENEVKKRLQQLSKTQRIDGFRAGKVPASVINKRFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E E+++ E + A P+ +E DL+ ++++
Sbjct: 61 AVRQEVAGEVMQRNFYEAIVSEKINPAGAPTFAPK---------ALEAGKDLEFSATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D + V + V ++++ + + K + + +T + D+VTVD+ +
Sbjct: 112 YPEVEVQGLDKITVEKPAVTVTDEDLANMLETLRKQHADWAEVDTAAGENDRVTVDFVGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E ++ +G + + +VG K G++ + FP+D+ ++L GK
Sbjct: 172 IDGEVFEGGKAEDFPLELGQGRMIPGFEDNIVGKKAGEEAIADVTFPDDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + ++ + A + G A++ + + + + V+ VK Q +
Sbjct: 232 QFTITVKKVEAQELPELSEEFATKFGVTEGGVDALKVEVKKNMTRELDQAVKANVKDQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ +VP++LV+ E + + Q+ + ++ E + +H A RV
Sbjct: 292 KGLLANNEIEVPKALVDQEVDALRQQAAQRFGG------DAQNMPELPAELFHEQAVTRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
TG++LG + + N I+V + ++++ + + +++++++ + ++R E
Sbjct: 346 KTGLLLGEVIKANEIKVDDAKVEALIATVASAY-EDPTEVVEYYKANDQLMQQMRNVAME 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ ++ IL + D + FD + +
Sbjct: 405 EQAVEAILAKATVTDVETAFDDIMNPQ 431
>gi|54309799|ref|YP_130819.1| trigger factor [Photobacterium profundum SS9]
gi|46914237|emb|CAG21017.1| similar to Tig, FKBP-type peptidyl-prolyl cis-trans isomerase
(trigger factor) [Photobacterium profundum SS9]
Length = 438
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 86/449 (19%), Positives = 209/449 (46%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL+R L + +P+ + ++ ++ I GFRPGK P+ + ++G
Sbjct: 6 MQVTVETTEGLERHLTITVPAANIENAVTAELKKIAKNRRFDGFRPGKAPMKMVARMFGG 65
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E+++ E + K A P+ T + I DL + S+++
Sbjct: 66 SVRQDILGEVMQRHFIEAIVKEKINPAGAPTFTPVD---------IAEGKDLVFKASFEV 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I ++ D + V + EV ++++ + + K + + +E +VT+D+ S
Sbjct: 117 FPEIVLAGLDQIAVEKPAVEVKDEDVTNMLDTLRKQQATWSDVDAAAEADSRVTIDFIGS 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + + +VG K G++ +E FPE++ ++L GK
Sbjct: 177 IDGEEFEGGKAEGFALAMGQNRMIPGFEDSIVGKKAGEEFTLEVTFPEEYHAENLKGKAA 236
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +V + + + + G ++ + +++ + V+ ++K Q+L
Sbjct: 237 SFAITLHKVEAQELPELTEEFIAKFGVLDGSIEGLKTEVRKNMERELKQAVKGRIKEQVL 296
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +VP +L++ E N + Q+ + + E + + AKRRV
Sbjct: 297 DGLVEQNDINVPAALIDQEINVLRQQAAQRFGG------DAKNTPELPRELFEEQAKRRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++G + + ++ E+ +++ + + + +++ ++++ ++ +R E
Sbjct: 351 VVGLLIGEVIKTEELKADEDRVKAIITEMASAY-EDPTEVVSYYEQNEKMMSNMRNVALE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ ID +L Q+ +++V F+ L + +
Sbjct: 410 EQAIDALLAKAQVTEKEVGFNDLMNQPAA 438
>gi|145635951|ref|ZP_01791636.1| hypothetical protein CGSHiAA_09972 [Haemophilus influenzae PittAA]
gi|148826643|ref|YP_001291396.1| trigger factor [Haemophilus influenzae PittEE]
gi|166229830|sp|A5UE12|TIG_HAEIE RecName: Full=Trigger factor; Short=TF
gi|145266784|gb|EDK06803.1| hypothetical protein CGSHiAA_09972 [Haemophilus influenzae PittAA]
gi|148716803|gb|ABQ99013.1| trigger factor [Haemophilus influenzae PittEE]
Length = 432
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 82/448 (18%), Positives = 206/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAVREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + + D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVVKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E ++G K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIIGHKAGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K++ + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKIENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPASAVEEEINVLRNQAAQRFGG------NAQQTAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADEERAKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKVSSFDEIMNPQA 432
>gi|68249289|ref|YP_248401.1| trigger factor [Haemophilus influenzae 86-028NP]
gi|319897852|ref|YP_004136049.1| bacterial trigger factor [Haemophilus influenzae F3031]
gi|329122524|ref|ZP_08251108.1| trigger factor [Haemophilus aegyptius ATCC 11116]
gi|81336286|sp|Q4QMK6|TIG_HAEI8 RecName: Full=Trigger factor; Short=TF
gi|68057488|gb|AAX87741.1| trigger factor [Haemophilus influenzae 86-028NP]
gi|309751688|gb|ADO81672.1| Trigger factor [Haemophilus influenzae R2866]
gi|317433358|emb|CBY81737.1| bacterial trigger factor [Haemophilus influenzae F3031]
gi|327473153|gb|EGF18576.1| trigger factor [Haemophilus aegyptius ATCC 11116]
Length = 432
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 206/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAVREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + + D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVVKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K++ + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKIENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPASAVEEEINVLRNQAAQRFGG------NAQQTAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADEERAKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKVSSFDEIMNPQA 432
>gi|241204433|ref|YP_002975529.1| trigger factor [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240858323|gb|ACS55990.1| trigger factor [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 494
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 177/438 (40%), Positives = 284/438 (64%), Gaps = 1/438 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKRE+ V+IP+ + D NER+ D++ K I GFRPGKVP +H+K +YGK
Sbjct: 1 MQVIETLAEGLKREIKVVIPAKDMQDKMNERLADVKDKVRINGFRPGKVPAAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+++ ++EI++E ILS R E++A +P I + E + D ++ D + LSY++
Sbjct: 61 SIMADLVNEIVREQPAAILSSRGEKSATQPEIAMTE-DKDEADKILAAEQDFEFTLSYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ S ++VT+++ ++ + E++ Q+ ++A++ A+E K ++ GD++T+DY
Sbjct: 120 LPPIELKSVKGIKVTREVIDISDDEVNEQVLKVAESARAYETKTGKAANGDRITMDYVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + + ++GS + LVG+K G +K I FP D+ K+LAGK+
Sbjct: 180 VDGEAFEGGTDQGAELVLGSGRFIPGFEDQLVGIKAGAEKTITVTFPADYPAKNLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ S+KEV +P V +N++LA +LG ES ++ + +I+ L RQK+KRQILD
Sbjct: 240 TFDVSVKEVAAPADVEINDELASKLGIESADRLKEIVRGQIESQYGSLTRQKLKRQILDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P SLV+ EYNGI +V +++ + + ++ D+ +E+ + Y LA+RRV
Sbjct: 300 LDEMYKFETPNSLVDAEYNGIWSQVNNDLAQSGKTFEDEDTTEEKAREEYKTLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EV+E+EMQ A+Y QL ++PG EK++L+ F+ P A A +RAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVSEDEMQRAIYDQLRQYPGQEKQILEFFRSQPGAAASIRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTF 438
VIDH+L + + D+KVT
Sbjct: 420 VIDHLLTEIDVTDKKVTK 437
>gi|301169431|emb|CBW29031.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Haemophilus
influenzae 10810]
Length = 432
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 84/448 (18%), Positives = 206/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAVREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + + D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVVKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKVENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPASAVEEEINVLRNQAAQRFGG------NAQQTAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADEERAKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKVSSFDEIMNPQA 432
>gi|145633846|ref|ZP_01789568.1| trigger factor [Haemophilus influenzae 3655]
gi|229847179|ref|ZP_04467283.1| trigger factor [Haemophilus influenzae 7P49H1]
gi|144985288|gb|EDJ92127.1| trigger factor [Haemophilus influenzae 3655]
gi|229809855|gb|EEP45577.1| trigger factor [Haemophilus influenzae 7P49H1]
Length = 432
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 207/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAVREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + ++ D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVAKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKVGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K++ + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKIENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPASAVEEEINVLRNQAAQRFGG------NAQQSAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADEERAKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKVSSFDEIMNPQA 432
>gi|319775446|ref|YP_004137934.1| bacterial trigger factor [Haemophilus influenzae F3047]
gi|317450037|emb|CBY86251.1| bacterial trigger factor [Haemophilus influenzae F3047]
Length = 432
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 82/448 (18%), Positives = 205/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAVREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + + D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVVKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKVGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K++ + + + ++ + G ++S + + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKIENMVLPELTDEFVAKFGPNTKSVADLCAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPASAVEEEINVLRNQAAQRFGG------NAQQTAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADEERAKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKVSSFDEIMNPQA 432
>gi|254514394|ref|ZP_05126455.1| trigger factor [gamma proteobacterium NOR5-3]
gi|219676637|gb|EED33002.1| trigger factor [gamma proteobacterium NOR5-3]
Length = 441
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 98/453 (21%), Positives = 202/453 (44%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R L V +P+ + +ER+ + GFRPGKVPL ++ +G
Sbjct: 1 MQVSIETTSKLERRLTVGVPAETVDTQVDERLRQAVKNVRLPGFRPGKVPLKVMRQRFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E++ E +++ + A +P+I + DL+ ++++
Sbjct: 61 GVRQEVLGEVMSRSFQEAVTQEKLKPAGQPTIEPRSM---------DAGKDLEYIATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +EI D V + + EV ++++D + K ++ E + GD+V +D+ +
Sbjct: 112 FPDVEILELKDYPVQKPVAEVADEDVDNIIEVFRKQRGSWVEVERPAAEGDRVNIDFEGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E S + +GS + + +VG+ GD K + FPED+ ++L G V
Sbjct: 172 RDGEAFEGGSAEGSDLELGSGQMIPGFEDGVVGMSAGDVKVLALTFPEDYHAEELKGAAV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +V +N +L G E ES R Q + + V +VK+Q++
Sbjct: 232 EFKVTLNKVEEMELAPLNAELYAAYGLEGDDESEFRAEVKQNMARELRNAVDARVKKQVM 291
Query: 299 DYISN-KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D + +VP +L+ E + + ++ + + +D + A RR
Sbjct: 292 DAVVEAYADLEVPAALISQEVDALRNQMFQQF--GGSAPEGMDLKAILPDDMFAENAARR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL + ++ E ++SA+ + + ++++ + LA +++ +
Sbjct: 350 VKLGLVLAELISHYELKADEAAIRSAVEEIASTY-QDPDEVVNWYFSNQEQLAAVQSKVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
EDKV++ +L+S + D ++ + +S+
Sbjct: 409 EDKVVERLLESAAVSDSACSYQEAIALGQQSNQ 441
>gi|254160505|ref|YP_003043613.1| trigger factor [Escherichia coli B str. REL606]
gi|253972406|gb|ACT38077.1| trigger factor [Escherichia coli B str. REL606]
Length = 432
Score = 256 bits (653), Expect = 6e-66, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQHFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|226329069|ref|ZP_03804587.1| hypothetical protein PROPEN_02972 [Proteus penneri ATCC 35198]
gi|225202255|gb|EEG84609.1| hypothetical protein PROPEN_02972 [Proteus penneri ATCC 35198]
Length = 434
Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats.
Identities = 83/446 (18%), Positives = 201/446 (45%), Gaps = 18/446 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + +P+ + + + ++ I GFR G VP+S +K YG
Sbjct: 1 MQVSVETTQGLGRRVTITVPAADIQTAVDSELKKAAKTVRIDGFRKGHVPMSMVKQRYGM 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L++ + +++ + + P + + D + +++
Sbjct: 61 SVLNDVLGDLMSRNFINAIIENKVNPVGAPEYKPEQY---------KEGEDFVYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ + ++V + + V ++++D + + K ++ K+ D+VTVD+ S
Sbjct: 112 FPEIELKDLESIEVVKPVVTVKDEDVDNMLETLRKQQAEWKDKDGVVAAEDRVTVDFNGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ +G + E ++G K G++ I+ FPED+ ++L GKK
Sbjct: 172 IDGEEFEGGKAEDFVLAMGQGRMIPGFEEGVIGHKAGEEFTIDVTFPEDYHAENLKGKKA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G +R + +++ + +R +VK Q++
Sbjct: 232 QFAINLKKVEERELPELTEEFIKRFGIADGSVDGLRAEVRKNMERELKNAIRTRVKTQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP + V +E + ++ + + + + AKRRV
Sbjct: 292 DGLVKANEVDVPAAAVNSEIEVLQRQAAQRFGG------DEKQALQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ ++ + + + + + ++++ + K + +R E
Sbjct: 346 IVGLLLGEVINSNELKAEDDRVNALIDEMASAY-EDPSEVVEFYNKNEQLMNNIRNLALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
++ ++ IL + ++ +++ F +L +
Sbjct: 405 EQAVEKILANAKVTEKETNFTELMNE 430
>gi|116251822|ref|YP_767660.1| trigger factor [Rhizobium leguminosarum bv. viciae 3841]
gi|118574083|sp|Q1MHK9|TIG_RHIL3 RecName: Full=Trigger factor; Short=TF
gi|115256470|emb|CAK07554.1| putative chaperone trigger factor [Rhizobium leguminosarum bv.
viciae 3841]
Length = 494
Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats.
Identities = 176/438 (40%), Positives = 284/438 (64%), Gaps = 1/438 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKRE+ V+IP+ + D NER+ D++ K I GFRPGKVP +H+K +YGK
Sbjct: 1 MQVIETLAEGLKREIKVVIPAKDMQDKMNERLADVKDKVRINGFRPGKVPAAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+++ ++EI++E ILS R E++A +P I + E + D ++ D + LSY++
Sbjct: 61 SIMADLVNEIVREQPAAILSSRGEKSATQPEIAMTE-DKDEADKILAAEQDFEFTLSYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ S ++VT+++ ++ + E++ Q+ ++A++ A+E K ++ GD++T+DY
Sbjct: 120 LPPIELKSVKGIKVTREVIDISDDEVNEQVLKVAESARAYETKTGKAANGDRITMDYVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + + ++GS + LVG+K G +K I FP D+ K+LAGK+
Sbjct: 180 VDGEAFEGGTDQGAELVLGSGRFIPGFEDQLVGVKAGAEKTITVTFPADYPAKNLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV +P V +N++LA +LG ES ++ + +I+ L RQK+KRQILD
Sbjct: 240 TFDVTVKEVAAPADVEINDELASKLGIESADRLKEIVRGQIESQYGSLTRQKLKRQILDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y F+ P SLV+ EYNGI +V +++ + + ++ D+ +E+ + Y LA+RRV
Sbjct: 300 LDEMYKFETPNSLVDAEYNGIWSQVNNDLAQSGKTFEDEDTTEEKAREEYKTLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EV+E+EMQ A+Y QL ++PG EK++L+ F+ P A A +RAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVSEDEMQRAIYDQLRQYPGQEKQILEFFRSQPGAAASIRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTF 438
VIDH+L + + D+KVT
Sbjct: 420 VIDHLLTEIDVTDKKVTK 437
>gi|126728814|ref|ZP_01744629.1| trigger factor [Sagittula stellata E-37]
gi|126710744|gb|EBA09795.1| trigger factor [Sagittula stellata E-37]
Length = 442
Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats.
Identities = 127/437 (29%), Positives = 229/437 (52%), Gaps = 9/437 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L + ++++ + +KGFR GKVPL+ +K +G
Sbjct: 1 MQVTETLNEGLKRGYAITVTAAELDEKVTAKLKEAQPDIEMKGFRKGKVPLALLKKQFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L ET+ E+I + E +R A++P + + +G + D+++ +SY+
Sbjct: 61 RVLGETMQEVIDGAMNEHFENTGDRPALQPEVKMVDG------EEWKEGDDVRVEMSYEA 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP++ + V + + + D+ +D + +A FE KE +E GD+V D+
Sbjct: 115 LPEVPEIDLSTITVQKLVVKADDASVDDALNNLASTAKDFETKEGPAEDGDQVVFDFLGK 174
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + + ++ ++GS E L G+ GD+K +E FPE++ ++LAGK
Sbjct: 175 VDGEAFDGGAAEDYPLVLGSGSFIPGFEEQLAGVSAGDEKVVEVKFPEEYGAENLAGKDA 234
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
IKEV + ++++LA + G E +++G ++++ RQ +KR +LD
Sbjct: 235 TFECKIKEVKAAKAAEIDDELAKKFGSEDLESLKGQIRERLEAEYAGAARQVMKRGLLDQ 294
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ +FD+P +L++ E I ++ E N + + E + + LA+RRV
Sbjct: 295 LDGMVSFDLPPTLLDAEAKQIAHQLWHE---ENPDVHDHNHDTIEPTEEHMNLAERRVRL 351
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G++L +G+K +EVT+ EM A+ Q ++PG E+ D ++ +LRAPIFEDK
Sbjct: 352 GLLLAELGQKAEVEVTDAEMTQAIMNQARQYPGQERAFFDFVRQNAQMQQQLRAPIFEDK 411
Query: 421 VIDHILKSVQIVDRKVT 437
VIDHI Q+ +++V+
Sbjct: 412 VIDHIADQAQVTEKEVS 428
>gi|15641925|ref|NP_231557.1| trigger factor [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121727832|ref|ZP_01680899.1| trigger factor [Vibrio cholerae V52]
gi|147673079|ref|YP_001217456.1| trigger factor [Vibrio cholerae O395]
gi|153820097|ref|ZP_01972764.1| trigger factor [Vibrio cholerae NCTC 8457]
gi|153829223|ref|ZP_01981890.1| trigger factor [Vibrio cholerae 623-39]
gi|183179519|ref|ZP_02957730.1| trigger factor [Vibrio cholerae MZO-3]
gi|227082053|ref|YP_002810604.1| trigger factor [Vibrio cholerae M66-2]
gi|229507981|ref|ZP_04397486.1| cell division trigger factor [Vibrio cholerae BX 330286]
gi|229511782|ref|ZP_04401261.1| cell division trigger factor [Vibrio cholerae B33]
gi|229515309|ref|ZP_04404769.1| cell division trigger factor [Vibrio cholerae TMA 21]
gi|229518919|ref|ZP_04408362.1| cell division trigger factor [Vibrio cholerae RC9]
gi|229529051|ref|ZP_04418441.1| cell division trigger factor [Vibrio cholerae 12129(1)]
gi|229607527|ref|YP_002878175.1| trigger factor [Vibrio cholerae MJ-1236]
gi|254849011|ref|ZP_05238361.1| trigger factor [Vibrio cholerae MO10]
gi|255745318|ref|ZP_05419267.1| cell division trigger factor [Vibrio cholera CIRS 101]
gi|262156042|ref|ZP_06029162.1| cell division trigger factor [Vibrio cholerae INDRE 91/1]
gi|262167885|ref|ZP_06035585.1| cell division trigger factor [Vibrio cholerae RC27]
gi|262192153|ref|ZP_06050313.1| cell division trigger factor [Vibrio cholerae CT 5369-93]
gi|298498039|ref|ZP_07007846.1| trigger factor tig [Vibrio cholerae MAK 757]
gi|12230730|sp|Q9KQS5|TIG_VIBCH RecName: Full=Trigger factor; Short=TF
gi|172047647|sp|A5F6X1|TIG_VIBC3 RecName: Full=Trigger factor; Short=TF
gi|254789031|sp|C3LNM7|TIG_VIBCM RecName: Full=Trigger factor; Short=TF
gi|9656459|gb|AAF95071.1| trigger factor [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121629868|gb|EAX62282.1| trigger factor [Vibrio cholerae V52]
gi|126509358|gb|EAZ71952.1| trigger factor [Vibrio cholerae NCTC 8457]
gi|146314962|gb|ABQ19501.1| trigger factor [Vibrio cholerae O395]
gi|148875261|gb|EDL73396.1| trigger factor [Vibrio cholerae 623-39]
gi|183012930|gb|EDT88230.1| trigger factor [Vibrio cholerae MZO-3]
gi|227009941|gb|ACP06153.1| trigger factor [Vibrio cholerae M66-2]
gi|227013821|gb|ACP10031.1| trigger factor [Vibrio cholerae O395]
gi|229332825|gb|EEN98311.1| cell division trigger factor [Vibrio cholerae 12129(1)]
gi|229343608|gb|EEO08583.1| cell division trigger factor [Vibrio cholerae RC9]
gi|229348014|gb|EEO12973.1| cell division trigger factor [Vibrio cholerae TMA 21]
gi|229351747|gb|EEO16688.1| cell division trigger factor [Vibrio cholerae B33]
gi|229355486|gb|EEO20407.1| cell division trigger factor [Vibrio cholerae BX 330286]
gi|229370182|gb|ACQ60605.1| cell division trigger factor [Vibrio cholerae MJ-1236]
gi|254844716|gb|EET23130.1| trigger factor [Vibrio cholerae MO10]
gi|255737148|gb|EET92544.1| cell division trigger factor [Vibrio cholera CIRS 101]
gi|262023612|gb|EEY42313.1| cell division trigger factor [Vibrio cholerae RC27]
gi|262030220|gb|EEY48864.1| cell division trigger factor [Vibrio cholerae INDRE 91/1]
gi|262031942|gb|EEY50520.1| cell division trigger factor [Vibrio cholerae CT 5369-93]
gi|297542372|gb|EFH78422.1| trigger factor tig [Vibrio cholerae MAK 757]
gi|327484466|gb|AEA78873.1| Cell division trigger factor [Vibrio cholerae LMA3894-4]
Length = 433
Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats.
Identities = 88/449 (19%), Positives = 214/449 (47%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLENIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E +N +G+ + + +VG G + I+ FPED+ ++L GK
Sbjct: 172 IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ R G A++ + +++ + ++ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + VP +L++ E N + Q+ NV++ + + + AKRRV
Sbjct: 292 EGLVKENEIQVPSALIDQEINVLRQQAAQRFGG------NVEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEEKVKALITEMATAY-EDPSEVVSYYEQNQQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ +D I+ ++ ++ ++F +L + +
Sbjct: 405 EQAVDAIIAKAKVTEKAISFSELMNPVAA 433
>gi|300937052|ref|ZP_07151918.1| trigger factor [Escherichia coli MS 21-1]
gi|300457883|gb|EFK21376.1| trigger factor [Escherichia coli MS 21-1]
Length = 432
Score = 256 bits (652), Expect = 7e-66, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKIRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|261868580|ref|YP_003256502.1| trigger factor [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413912|gb|ACX83283.1| trigger factor [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 432
Score = 256 bits (652), Expect = 7e-66, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 219/448 (48%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + V +P+ + + E ++ + A + GFR GKVP I+ +G
Sbjct: 1 MSLNIETTQGLERRVTVTVPAETVDQAVREELKRVAKNARVDGFRKGKVPPQIIEKRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++++ + + + A RPS T+ + E +LK ++++
Sbjct: 61 SVRQDILGDLLQKHFFQAVIENKVNLAGRPSFTVEQ---------FEDGKELKFSATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K + + ++ D+VT+D+ S
Sbjct: 112 YPEVELKGLENIKVEKPVVEISEADVDKMVDVLRKQQATWSETQEVAKAEDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + ++ G + + +VG K GD+ I+ FPE++ + L GK
Sbjct: 172 VDGEEFEGGNAEDFVLFTGQGRMIPGFEDGIVGHKAGDKFTIDVTFPEEYHSEKLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K+V + + + ++ + G ++S +R + +++ + + +VK Q++
Sbjct: 232 KFDITLKKVEAMVLPELTDEFIAKFGPNTKSVADLRSEIRKNMQRELKNALTTRVKNQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP + VE E + + Q+ N + + + + AKRRV
Sbjct: 292 DGLVEQNQIDVPSAAVEQEIDVLRQQAAQRFGG------NAQQVAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
L G++L + N ++ EE ++ + + +++++ K + +R + E
Sbjct: 346 LVGLLLAQVIASNELKADEERAKAMIEDIASAY-EQPADVVEYYSKNNELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ TFD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKAATFDEIMNPQA 432
>gi|152978443|ref|YP_001344072.1| trigger factor [Actinobacillus succinogenes 130Z]
gi|171704283|sp|A6VME0|TIG_ACTSZ RecName: Full=Trigger factor; Short=TF
gi|150840166|gb|ABR74137.1| trigger factor [Actinobacillus succinogenes 130Z]
Length = 431
Score = 256 bits (652), Expect = 7e-66, Method: Composition-based stats.
Identities = 84/445 (18%), Positives = 207/445 (46%), Gaps = 18/445 (4%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ ++GL+R + + IP++ + + E+++ A + GFR GKVP I +G S
Sbjct: 3 TIETTQGLERRVSITIPADEVETAVREQLKGFAKNARVDGFRKGKVPHHIIAQRFGSSAR 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
SE +++++ ++ K A RP+ + E D+ ++++ P+
Sbjct: 63 SEALNDLLPRHFFDLAFKEKLNLAGRPTFAVENA---------ESGKDVVFTATFEVYPE 113
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
+E+ ++++V + + E+ E ++D + + K + + + D+VT+D++ ++D
Sbjct: 114 VELKGLENIKVEKPVVEITEADVDNMIEVLRKQQATWAESQAAANAEDRVTIDFSGTIDG 173
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E + +G + E ++G K G+Q +I+ FP D+ ++L GK +
Sbjct: 174 EEFEGGKASDFVLFMGQGRMIPGFEEGVIGHKAGEQFDIDVTFPADYHAENLKGKAAKFA 233
Query: 244 FSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++K+V + + + + ++ + +R + +++ + + +VK+Q++D +
Sbjct: 234 ITLKKVEVMVLPELTEEFVAKFGPNTKTVADLRNEIQKNMRRELKNALTSRVKQQVIDGL 293
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ DVP + V+ E + + N + + + AKRRV G
Sbjct: 294 LAENAIDVPFAAVDQEIEVLRGQAAQRFGG------NTQQAAQLPRELFEEQAKRRVQVG 347
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++ G I N ++ EE +++ + + ++++++ K + LR + E++
Sbjct: 348 LLFGEIISSNELKADEERVKAMIEDIASAY-EQPAEVIEYYNKNNELMNNLRNVVLEEQA 406
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSS 446
+D +L Q+ ++ +FD++ + +
Sbjct: 407 VDAVLAKAQVTEKTASFDEIMNPQA 431
>gi|297579441|ref|ZP_06941369.1| trigger factor [Vibrio cholerae RC385]
gi|297537035|gb|EFH75868.1| trigger factor [Vibrio cholerae RC385]
Length = 433
Score = 256 bits (652), Expect = 7e-66, Method: Composition-based stats.
Identities = 88/449 (19%), Positives = 214/449 (47%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLENIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDESAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E +N +G+ + + +VG G + I+ FPED+ ++L GK
Sbjct: 172 IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ R G A++ + +++ + ++ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + VP +L++ E N + Q+ NV++ + + + AKRRV
Sbjct: 292 EGLVKENEIQVPSALIDQEINVLRQQAAQRFGG------NVEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEEKVKALITEMATAY-EDPSEVVSYYEQNQQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ +D I+ ++ ++ ++F +L + +
Sbjct: 405 EQAVDAIIAKAKVTEKAISFSELMNPVAA 433
>gi|262042472|ref|ZP_06015631.1| trigger factor [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|259040176|gb|EEW41288.1| trigger factor [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
Length = 432
Score = 256 bits (652), Expect = 8e-66, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + ++ + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIENAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRHFVDAIIKEKINPAGAPN---------YVPGEYKLGEDFTYAVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + EV + ++D + + K ++ KE + D+VT+D+T S
Sbjct: 112 YPEVELQGLDAIEVEKPVVEVTDADVDTMLETLRKQQATWKEKEGAVDAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E S +R + +++ + VR +VK Q +
Sbjct: 232 KFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMERELKGAVRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANEIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE +++ + + + ++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKALIEEMASAY-EDPSEVVEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ ++ +F++L + +
Sbjct: 405 EQAVEAVLAKAKVSEKATSFNELMNQQA 432
>gi|307293099|ref|ZP_07572945.1| trigger factor [Sphingobium chlorophenolicum L-1]
gi|306881165|gb|EFN12381.1| trigger factor [Sphingobium chlorophenolicum L-1]
Length = 533
Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats.
Identities = 127/440 (28%), Positives = 238/440 (54%), Gaps = 12/440 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ +E +EGLKR V I S + + + I + + GFRPGKVP + +K ++G+
Sbjct: 1 MQTVETLNEGLKRAYTVTITSKDIDARVEKEVAAIAPQMRMPGFRPGKVPANLVKKMHGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + ++ I++ + ++++ + R AM+PS+ ++E E D +++++ ++
Sbjct: 61 SLQRDALNNSIQDSIQKLIADQKLRPAMQPSVELDE--------NFEFGKDAEIKVALEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE--TESEIGDKVTVDYT 178
LP+I S + L++ + EV + ++D IA A E +++ GD +T+D+
Sbjct: 113 LPEIAAPSVEGLKLERLTVEVADAQVDEAAGRIATQQGALEEHAAGHKAKDGDTLTIDFV 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + E S ++V+ +GS E L G+K GD+K I FPED+ LAGK
Sbjct: 173 GKIGDEAFEGGSAEDVKLKIGSGQFIPGFEEQLTGVKKGDEKTITVIFPEDYGAAHLAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K + + +++D A LG E ++ L +I+Q L R +KR++L
Sbjct: 233 EATFDITVKSILNADKPKLDDDFAKSLGLEGLDQLKELLKGQIEQEHNGLTRTYMKRKLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + FDVP S+VE E+N I +++ E + + E + + Y +A RRV
Sbjct: 293 DQLAAAHDFDVPPSMVEAEFNQIWAQLQHEATHEEDPEAALA-EMEAEKEDYRGIAVRRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELRAPIF 417
G++L IG+ N + V+++EM + Q ++ P ++ + + ++ P A A+LRAP++
Sbjct: 352 RLGLLLSEIGQANGVVVSDQEMNRLIMQAAQQYSPQDRERFVQYVRQDPMAAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVT 437
EDKV+D + + +I DR V+
Sbjct: 412 EDKVVDFLFEKAEITDRAVS 431
>gi|16272653|ref|NP_438871.1| trigger factor [Haemophilus influenzae Rd KW20]
gi|1174696|sp|P44837|TIG_HAEIN RecName: Full=Trigger factor; Short=TF
gi|1573715|gb|AAC22370.1| trigger factor (tig) [Haemophilus influenzae Rd KW20]
Length = 432
Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 205/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAVREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFNAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + + D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVVKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K++ + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKIENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPVSAVEEEINVLRNQAAQRFGG------NAQQTAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADEERAKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKVSSFDEIMNPQA 432
>gi|94498804|ref|ZP_01305350.1| trigger factor [Sphingomonas sp. SKA58]
gi|94421733|gb|EAT06788.1| trigger factor [Sphingomonas sp. SKA58]
Length = 535
Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats.
Identities = 132/440 (30%), Positives = 238/440 (54%), Gaps = 12/440 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ +E +EGLKR V I S + ++ ++ I + + GFRPGKVP + +K ++G+
Sbjct: 1 MQTVETLNEGLKRAYTVTITSKDIDARVDKEVKAIAPQVRMPGFRPGKVPANLVKKMHGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + ++ I++ + ++++ + R AM+PS+ ++EG E D ++++ ++
Sbjct: 61 SLQRDALNNSIQDSIQKLIADQKLRPAMQPSVELDEG--------FEFGKDAEVKVELEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTVDYT 178
LP+I S + L++ + EV + ++ A IA A E + + GD + +D+
Sbjct: 113 LPEITAPSIEGLKLERLTVEVADDKVAEAAARIAGQQGALEDHADDHAAAEGDTLVIDFV 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E S ++++ +GS E L G+K G++K I+ FPED+ + LAGK
Sbjct: 173 GKVDGEAFEGGSAEDIRLKIGSGQFIPGFEEQLTGVKKGEEKTIDVTFPEDYGAEHLAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V + V+ D A LG ES + L +I+Q L R +KR++L
Sbjct: 233 AATFDVTVKAVLNGDKPKVDEDFAKSLGLESLDKLNELLKGQIEQEHNGLTRTHMKRKLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + FDVP S+VE E+N I Q++ E S + E + + Y +A RRV
Sbjct: 293 DQLAANHDFDVPPSMVEAEFNQIWQQLEHEASHEEDP-EAALKEMEAEKEDYRAIAVRRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK-MLDHFQKYPNALAELRAPIF 417
G++L IG+ N + V+++EM + Q ++ +++ + + ++ P A A+LRAP++
Sbjct: 352 RLGLLLSEIGQANGVAVSDQEMNRLIMQAAQQYGPQDRERFVQYVRQDPMAAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVT 437
EDKV+D + + +I DR VT
Sbjct: 412 EDKVVDFLFEKAEITDRAVT 431
>gi|83858432|ref|ZP_00951954.1| trigger factor [Oceanicaulis alexandrii HTCC2633]
gi|83853255|gb|EAP91107.1| trigger factor [Oceanicaulis alexandrii HTCC2633]
Length = 476
Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats.
Identities = 137/447 (30%), Positives = 256/447 (57%), Gaps = 5/447 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V+EK +EGL R +V++P++ L +IE+IR + +KGFRPGKVP +HI+ ++G
Sbjct: 1 MNVVEKSAEGLSRTFEVVVPASELEAKLTAKIEEIRPEVRLKGFRPGKVPANHIRKMFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+ + + E++ + + L +R R A +P++ + D+ ++ D +S +I
Sbjct: 61 SIMGDILQELVPQATQDTLDERKIRPASQPAVDVKSDPEDV----LKKGADFSFEISLEI 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P+ + L++T+ + +V ++++D + E+AK V++E K+ ++ GDKV +D+ S
Sbjct: 117 MPEFDTIDPKTLKLTRPVAKVADEQVDEALQELAKQAVSYEEKKGKAADGDKVVIDFVGS 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + + + + ++GS + LVG K GD+ +++ FPE++ LAGK
Sbjct: 177 IDGEEFQGGAAEGAELVLGSGQFIPGFEDQLVGAKAGDKVDVKVTFPEEYQAAHLAGKDA 236
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+KEV +P +++ LA RLG A++ ++ + R KVKR +LD
Sbjct: 237 VFATEVKEVQAPGETQIDDSLAERLGLSDLDALKDALIKRFESEHAQASRMKVKRSLLDE 296
Query: 301 ISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + D+P +VE E+ I ++V+ + + ++ + ++E Y +A+RRV
Sbjct: 297 LDAAHDSVDLPAKMVEQEFEQIWREVQNAIENDQLDDEDKNKSEDELKTDYRKIAERRVR 356
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G+VL IG K N++VT+EE+ A+ Q+ RF G E+++++ +QK P A+ LRAPI+E+
Sbjct: 357 LGLVLAEIGRKANVDVTQEELARAVNQEAQRFQGREREVVEFYQKNPGAIQALRAPIYEE 416
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSS 446
KV+D+IL+ + D+++ + LF
Sbjct: 417 KVVDYILELADVTDQEIDREALFAEDD 443
>gi|262166053|ref|ZP_06033790.1| cell division trigger factor [Vibrio mimicus VM223]
gi|262025769|gb|EEY44437.1| cell division trigger factor [Vibrio mimicus VM223]
Length = 433
Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats.
Identities = 87/449 (19%), Positives = 213/449 (47%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +D+ V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLEDIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + +VG G + I+ FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ R G A++ + +++ + ++ ++K Q +
Sbjct: 232 QFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L++ E + Q+ NV++ + + + AKRRV
Sbjct: 292 EGLVKANEIDVPSALIDQEIGVLRQQAAQRFGG------NVEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++++ EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIRTHDLKADEEKVKALITEMATAY-EDPTEVVAYYEQNQQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ +D I+ ++ ++ ++F +L + +
Sbjct: 405 EQAVDAIIAKAKVTEKAISFSELMNPVAA 433
>gi|309973790|gb|ADO96991.1| Trigger factor [Haemophilus influenzae R2846]
Length = 432
Score = 255 bits (651), Expect = 9e-66, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 207/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAVREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + + D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVVKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E ++G K G+Q +I+ FP ++ ++L GK+
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIIGHKAGEQFDIDVTFPAEYHAENLKGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKVENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPSSAVEEEINVLRNQAAQRFGG------NTQQAAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADEERAKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKVSSFDEIMNPQA 432
>gi|229845546|ref|ZP_04465674.1| trigger factor [Haemophilus influenzae 6P18H1]
gi|229811562|gb|EEP47263.1| trigger factor [Haemophilus influenzae 6P18H1]
Length = 432
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 206/448 (45%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAIREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIVGRPTFAIET---------FEEGKDLVFNATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + ++ D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVAKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKVENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPASAVEEEINVLRNQAAQRFGG------NTQQAAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADEERAKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKVSSFDEIMNPQA 432
>gi|91209509|ref|YP_539495.1| trigger factor [Escherichia coli UTI89]
gi|117622696|ref|YP_851609.1| trigger factor [Escherichia coli APEC O1]
gi|218557346|ref|YP_002390259.1| trigger factor [Escherichia coli S88]
gi|237707569|ref|ZP_04538050.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
sp. 3_2_53FAA]
gi|119370896|sp|Q1RFA0|TIG_ECOUT RecName: Full=Trigger factor; Short=TF
gi|166229044|sp|A1A8A5|TIG_ECOK1 RecName: Full=Trigger factor; Short=TF
gi|226695523|sp|B7MD95|TIG_ECO45 RecName: Full=Trigger factor; Short=TF
gi|91071083|gb|ABE05964.1| trigger factor [Escherichia coli UTI89]
gi|115511820|gb|ABI99894.1| trigger factor [Escherichia coli APEC O1]
gi|218364115|emb|CAR01780.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
coli S88]
gi|226898779|gb|EEH85038.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Escherichia
sp. 3_2_53FAA]
gi|294491897|gb|ADE90653.1| trigger factor [Escherichia coli IHE3034]
gi|307628094|gb|ADN72398.1| trigger factor [Escherichia coli UM146]
gi|315289847|gb|EFU49237.1| trigger factor [Escherichia coli MS 110-3]
gi|323952952|gb|EGB48820.1| hypothetical protein ERKG_00725 [Escherichia coli H252]
gi|323958629|gb|EGB54332.1| hypothetical protein ERLG_00211 [Escherichia coli H263]
Length = 429
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 90/445 (20%), Positives = 207/445 (46%), Gaps = 18/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
++ ++ +L ++ +++ TF++L +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMN 429
>gi|301049642|ref|ZP_07196591.1| trigger factor [Escherichia coli MS 185-1]
gi|300298579|gb|EFJ54964.1| trigger factor [Escherichia coli MS 185-1]
Length = 432
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 207/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K + K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQAPGKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTEEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|145628437|ref|ZP_01784238.1| trigger factor [Haemophilus influenzae 22.1-21]
gi|144980212|gb|EDJ89871.1| trigger factor [Haemophilus influenzae 22.1-21]
Length = 432
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAIREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + ++ D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVAKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKVENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S+VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPASVVEEEINVLRNQAAQRFGG------NTQQAAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ +E ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADKERAKAMIADIASAY-EQPAEVVEYYSKNKELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKVSSFDEIMNPQA 432
>gi|260913096|ref|ZP_05919578.1| trigger factor [Pasteurella dagmatis ATCC 43325]
gi|260632683|gb|EEX50852.1| trigger factor [Pasteurella dagmatis ATCC 43325]
Length = 432
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 86/448 (19%), Positives = 210/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++GL+R + + +PS+ + + E ++ + A + GFR GKVP I+ +G
Sbjct: 1 MSFTIETTQGLERRVQITVPSDAVEGAVREELKRVAKTARVDGFRKGKVPPHIIEKRFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E+++ ++ ++ A RPS + + E DL ++++
Sbjct: 61 SVRHDVLGELLQSNFFNVIIEQKVNLAGRPSFAVEQ---------FEVGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V + + E+ + +I++ + + K + ++ D+V +D+ S
Sbjct: 112 YPEVELKGLDQIKVEKPVVEITDADIEKMIEVLRKQQATWAESTDAAKAEDRVVIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E ++ +G + E +VG K G+Q +I FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKAEDFTLFMGQGRMIPGFEEGIVGHKAGEQFDINVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + ++ + ++ +R + +++ + + KVK Q++
Sbjct: 232 KFAINLKKVEVMVLPELTDEFVAKFGPNTKTVDDLRNEIRKNMQRELKNALTAKVKGQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +VP S VE E + + N + + + + AKRRV
Sbjct: 292 DGLLAQNEIEVPASAVEQEIEVLRGQAAQRFGG------NAEQTAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + N ++V + ++ + + + ++++++ K + +R + E
Sbjct: 346 QVGLLLAEVIASNELKVDDARAKAMIEEIASAY-EQPAEVVEYYSKNKELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKAASFDEVMNPQA 432
>gi|52425904|ref|YP_089041.1| trigger factor [Mannheimia succiniciproducens MBEL55E]
gi|52307956|gb|AAU38456.1| Tig protein [Mannheimia succiniciproducens MBEL55E]
Length = 454
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 80/445 (17%), Positives = 209/445 (46%), Gaps = 18/445 (4%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ ++GL+R + + +P+ +T + + ++ + A + GFR GKVP I+ +G S+
Sbjct: 26 TIETTQGLERRVSITVPAETVTTAVRDELKRVAKNARVDGFRKGKVPAQIIEKRFGASVR 85
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+ +++++ ++ K A RP+ + E DL+ ++++ P+
Sbjct: 86 QDVLNDLLPRHFFDLAFKEKVNLAGRPTFAVE---------NYEEGKDLQFTATFEVYPE 136
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
I++ ++++V + + E+ + ++D + + K + + + D+VT+D+ S+D
Sbjct: 137 IQLQGLENIKVEKPVVEITDADVDNMVEVLRKQQATWAETDNAATKDDRVTIDFVGSIDG 196
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
+ + +G + + ++G K G+Q +IE FPED+ +++L K +
Sbjct: 197 EEFQGGKANDFVLAMGQGRMIPGFEDGILGHKAGEQFDIEVTFPEDYHVENLKAKPAKFA 256
Query: 244 FSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++K+V + + D + ++ +R + +++ + + +VK Q++D +
Sbjct: 257 ITVKKVEVMVLPELTADFIAKFGPNTKTVDDLRAEIRKNMQRELKNALTARVKNQVIDGL 316
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ DVP + V+ E + + +++ + + + AKRRV G
Sbjct: 317 IEQNQIDVPFAAVDQEIEVLRNQAAQRFGGNGEQAAQL------PRELFEEQAKRRVQVG 370
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++L + N ++ EE+ ++ + + ++++++ K + +R + E++
Sbjct: 371 LLLAEVISSNELKADEEKAKAMIEDIASAY-EQPAEVVEYYSKNNELMNNIRNVVLEEQA 429
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSS 446
ID +L Q+ ++ +FD++ + +
Sbjct: 430 IDAVLAKAQVTEKASSFDEVMNPQA 454
>gi|187731745|ref|YP_001879147.1| trigger factor [Shigella boydii CDC 3083-94]
gi|238689515|sp|B2U4P1|TIG_SHIB3 RecName: Full=Trigger factor; Short=TF
gi|187428737|gb|ACD08011.1| trigger factor [Shigella boydii CDC 3083-94]
gi|320173744|gb|EFW48927.1| Cell division trigger factor [Shigella dysenteriae CDC 74-1112]
Length = 432
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD+ E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDSEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|82775657|ref|YP_402004.1| trigger factor [Shigella dysenteriae Sd197]
gi|119370935|sp|Q32JJ2|TIG_SHIDS RecName: Full=Trigger factor; Short=TF
gi|81239805|gb|ABB60515.1| trigger factor [Shigella dysenteriae Sd197]
Length = 432
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 207/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ + +L ++ +++ TF++L + +
Sbjct: 405 EQAAEAVLAKAKVTEKETTFNELMNQQA 432
>gi|315127190|ref|YP_004069193.1| trigger factor [Pseudoalteromonas sp. SM9913]
gi|315015704|gb|ADT69042.1| trigger factor [Pseudoalteromonas sp. SM9913]
Length = 434
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 86/447 (19%), Positives = 209/447 (46%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ + +R++ + I GFR GKVP+S I +G
Sbjct: 1 MQVSVETTQGLERRLTITVPAENVETEVKKRLQQLSKTQRIDGFRAGKVPVSVINKRFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E E+++ E + A P+ +E DL+ ++++
Sbjct: 61 AVRQEVAGEVMQRNYIEAIVAEKINPAGAPTFAPK---------ALEAGKDLEFSATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + + V + EV ++++ + + K + ++ + + D+VTVD+ +
Sbjct: 112 YPEVEVQGLEKITVEKPAVEVTDEDLANMLETLRKQHASWADVDAAAGANDRVTVDFVGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ E ++ +G + + +VG K G++ + FPED+ ++L GK
Sbjct: 172 INGEEFEGGKAEDFPLELGQGRMIPGFEDNIVGKKAGEEVVADVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + ++++ A + G A++ + + + + V+ VK Q +
Sbjct: 232 QFTITVKKVEAQELPELSDEFATKFGVTEGGVDALKEEVKKNMTRELDQAVKANVKDQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +VP++L++ E + + Q+ Q + E + +H A RV
Sbjct: 292 KGLLEQNEVEVPKALIDQEVDALRQQAAQRFGGNGQN------MPELPAELFHEQAVTRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
TG++LG + + N+I+V + ++++ + + +++++++ + ++R E
Sbjct: 346 KTGLLLGEVIKANDIKVDDAKVEALIATVASAY-EDPTEVVEYYKANDQLMQQMRNVAME 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ ++ IL + D + FD + +
Sbjct: 405 EQAVEAILAKATVTDVEKAFDDIMNPQ 431
>gi|229523943|ref|ZP_04413348.1| cell division trigger factor [Vibrio cholerae bv. albensis VL426]
gi|229337524|gb|EEO02541.1| cell division trigger factor [Vibrio cholerae bv. albensis VL426]
Length = 433
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 89/449 (19%), Positives = 214/449 (47%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLENIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E +N +G+ + + +VG G + I+ FPED+ ++L GK
Sbjct: 172 IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ R G A++ + +++ + ++ +VK Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARVKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + VP +L++ E N + Q+ NV++ + + + AKRRV
Sbjct: 292 EGLVKENEIQVPSALIDQEINVLRQQAAQRFGG------NVEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEEKVKALITEMATAY-EDPSEVVSYYEQNQQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ +D I+ ++ ++ ++F +L + +
Sbjct: 405 EQAVDAIIAKAKVTEKAISFSELMNPVAA 433
>gi|145639473|ref|ZP_01795078.1| trigger factor [Haemophilus influenzae PittII]
gi|145271520|gb|EDK11432.1| trigger factor [Haemophilus influenzae PittII]
Length = 432
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 84/448 (18%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAIREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + ++ D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVAKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKVGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKVENMVLPELTDEFVAKFGPNTKSVADLRVEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S+VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPASVVEEEINVLRNQAAQRFGG------NAQQTAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADEERTKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLTKAQVTEKVSSFDEIMNPQA 432
>gi|229521844|ref|ZP_04411261.1| cell division trigger factor [Vibrio cholerae TM 11079-80]
gi|229340769|gb|EEO05774.1| cell division trigger factor [Vibrio cholerae TM 11079-80]
Length = 433
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 88/449 (19%), Positives = 215/449 (47%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLENIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E +N +G+ + + +VG G + I+ FPED+ ++L GK
Sbjct: 172 IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ R G A++ + +++ + ++ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + VP +L++ E N + Q+ NV++ + + + AKRRV
Sbjct: 292 EGLVKENEIQVPSALIDQEINVLRQQAAQRFGG------NVEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEEKVKALITEMATAY-EDPSEVVSYYEQNQQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ +D I+ ++ ++ ++F++L + +
Sbjct: 405 EQAVDAIIAKAKVTEKAISFNELMNPVAA 433
>gi|254252155|ref|ZP_04945473.1| Trigger factor [Burkholderia dolosa AUO158]
gi|124894764|gb|EAY68644.1| Trigger factor [Burkholderia dolosa AUO158]
Length = 494
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 99/461 (21%), Positives = 217/461 (47%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + RI+ + + GFRPGKVPL + Y
Sbjct: 47 MANVVENLGKLERRVTISLPKETVRKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 106
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + +++ ++++
Sbjct: 107 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFAPKQEQAE---------DAYAFDATFEV 157
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P+++I +V + + + EIDR + + K V + + +T ++
Sbjct: 158 YPEVKIGDLSTAEVERSTTTIGDAEIDRTLDILRKQRVHYHARGEGGEHGDGGADTAAQN 217
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D V + + ++ F++G + E + +GLK G+ + + FP+D
Sbjct: 218 GDRVTVDFVGKIDGVAFQGGTAEDFPFVLGEGRMLPEFEQAALGLKAGESRTFDLKFPDD 277
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ + A LG E MR + +++ ++
Sbjct: 278 YHGKDVAGKTAQFTVTMKKVEWPHLPEIDAEFAKSLGIEDGDLTKMRNEIKENLEREAKR 337
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 338 RTQAIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 394
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 395 EMFAEQAERRVRLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 453
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 454 RLAEMEAFVVESNVVDFVLSKAKVTDKEVSFEALASASAQA 494
>gi|262171082|ref|ZP_06038760.1| cell division trigger factor [Vibrio mimicus MB-451]
gi|261892158|gb|EEY38144.1| cell division trigger factor [Vibrio mimicus MB-451]
Length = 433
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 86/449 (19%), Positives = 212/449 (47%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +D+ V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLEDIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ E +N +G+ + + +VG G + I+ FPE++ ++L GK
Sbjct: 172 INGEEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ R G A++ + +++ + ++ ++K Q +
Sbjct: 232 QFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L++ E + Q+ NV++ + + + AKRRV
Sbjct: 292 EGLVKANEIDVPSALIDQEIGVLRQQAAQRFGG------NVEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEEKVKALITEMATAY-EDPTEVVAYYEQNQQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ +D I+ ++ ++ ++F +L + +
Sbjct: 405 EQAVDAIIAKAKVTEKAISFSELMNPVAA 433
>gi|251791942|ref|YP_003006662.1| trigger factor [Aggregatibacter aphrophilus NJ8700]
gi|247533329|gb|ACS96575.1| trigger factor [Aggregatibacter aphrophilus NJ8700]
Length = 432
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 216/448 (48%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ + + E ++ + A + GFR GKVP I+ +G
Sbjct: 1 MSLNIETTQGLERRVSITVPAETVEQAVREELKRVAKNARVDGFRKGKVPPQIIEKRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++++ + + + A RPS T+ + E +LK ++++
Sbjct: 61 SVRQDILGDLLQKHFFQAVIENKVNLAGRPSFTVEQ---------FEDGKELKFSATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K + + ++ D+VT+D+ S
Sbjct: 112 YPEVELKGLENIKVEKPVVEISEADVDKMVEVLRKQQANWSESQDAAKAEDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E ++ +G + + +VG K GD+ I+ FPE++ + L GK
Sbjct: 172 VDGEEFEGGKAEDFVLFMGQGRMIPGFEDGIVGHKAGDKFTIDVTFPEEYHSEKLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K+V + + ++ + G ++S +R + +++ + + +VK Q++
Sbjct: 232 KFDITLKKVEVMVLPELTDEFVAKFGPNTKSVVDLRAEIRKNMQRELKNALTTRVKTQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP + VE E + Q+ N + + + AKRRV
Sbjct: 292 DGLVEQNPIDVPSAAVEQEIEVLRQQAAQRFGG------NAQQAAQLPRELFEDQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
L G++L + N ++ EE ++ + + +++++ K + +R + E
Sbjct: 346 LVGLLLAQVIASNELKADEERAKAMIEDIASAY-EQPADVVEYYSKNKELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ TFD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKAATFDEIMNPQA 432
>gi|159184864|ref|NP_354652.2| trigger factor [Agrobacterium tumefaciens str. C58]
gi|23822235|sp|Q8UEU0|TIG_AGRT5 RecName: Full=Trigger factor; Short=TF
gi|159140145|gb|AAK87437.2| trigger factor [Agrobacterium tumefaciens str. C58]
Length = 492
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 178/471 (37%), Positives = 294/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE ++GLKREL ++IP+ + +ER+ D + K I GFRPGKVP+ H+K +YGK
Sbjct: 1 MQVIETLADGLKRELKIVIPAADMKARLDERLVDAKDKVRINGFRPGKVPMGHLKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+++ ++E+++E EILS R E++A +P+I++ E E + + D + ++Y+I
Sbjct: 61 SIMADLVNELVREKPSEILSSRGEKSATQPAISMTEDEQEAEKI-LSAESDFEFTVAYEI 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P IE+ + D ++VT+++ EV E EI+ Q+ +IA++ +E K+ ++ GD+VT++Y
Sbjct: 120 IPAIELKANDGIKVTREVVEVSEDEINEQILKIAESARTYETKKGKAADGDRVTMNYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD V + + ++ + ++GS + LVG+K GD+K I FP D+ +LAGK
Sbjct: 180 VDGVAFDGGTAEDAELVLGSGRFIPGFEDQLVGVKAGDEKTITVTFPADYPAANLAGKDA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV + V +N++LA +LG ES ++ + +I+ + RQKVKRQILD
Sbjct: 240 TFDVTVKEVAAAAAVEINDELAEKLGLESAEKLKEIVKGQIESQFGNVTRQKVKRQILDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y FD P LV+ E++ I +++ +++ + + + D+ +EE + Y LA+RRV
Sbjct: 300 LDEMYKFDTPAGLVDAEFDNIWRQINTDLAQSGKTFADEDTTEEEAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEEMQ AL+QQL +FPG +K++LD F+ P A A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEEMQRALFQQLQQFPGQQKEILDFFRNTPGASASLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
VID +L + + D+ V+ ++L + E E +K + + +E
Sbjct: 420 VIDKLLTEISVTDKTVSKEELLADDGEEETETKKKAPAKKKAAAKADDAAE 470
>gi|148827881|ref|YP_001292634.1| trigger factor [Haemophilus influenzae PittGG]
gi|166229891|sp|A5UHJ5|TIG_HAEIG RecName: Full=Trigger factor; Short=TF
gi|148719123|gb|ABR00251.1| trigger factor [Haemophilus influenzae PittGG]
Length = 432
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + +E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAIHEEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + ++ D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDIAKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKVENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S+VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPASVVEEEINVLRNQAAQRFGG------NTQQAAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ +E ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADKERAKAMIADIASAY-EQPAEVVEYYSKNKELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKVSSFDEIMNPQA 432
>gi|294011934|ref|YP_003545394.1| trigger factor [Sphingobium japonicum UT26S]
gi|292675264|dbj|BAI96782.1| trigger factor [Sphingobium japonicum UT26S]
Length = 534
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 129/440 (29%), Positives = 236/440 (53%), Gaps = 12/440 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ +E +EGLKR V I S + + + I + + GFRPGKVP + +K ++G+
Sbjct: 1 MQTVETLNEGLKRAYTVTITSKDIDARVEKEVAAIAPQVRMPGFRPGKVPANLVKKMHGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + ++ I++ + ++++ R AM+PS+ ++EG E D ++++ ++
Sbjct: 61 SLQRDALNNSIQDGIQKLIADNKLRPAMQPSVELDEG--------FEFGKDAEVKVELEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTVDYT 178
LP+I S + L++ + EV + ++D IA A E +++ GD +T+D+
Sbjct: 113 LPEIAAPSIEGLKLERLTVEVADAQVDEAAGRIATQQGALEEHAASHKAKDGDTLTIDFV 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E S ++V+ +GS E L G+K GD+K I FPED+ LAGK
Sbjct: 173 GKIDGEAFEGGSAEDVKLKIGSGQFIPGFEEQLTGVKKGDEKTITVTFPEDYGAAHLAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K + +++D A LG E ++ L +I+Q L R +KR++L
Sbjct: 233 EATFDITVKAILDADKPKLDDDFAKSLGLEGLDQLKELLKGQIEQEHNGLTRTYMKRKLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + FDVP S+VE E+N I +++ E S + E + + Y +A RRV
Sbjct: 293 DQLAAAHDFDVPPSMVEAEFNQIWAQLQHEASHEEDP-EAALKEMEAEKEDYRAIAVRRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELRAPIF 417
G++L IG+ + + V+++EM + Q ++ P ++ + + ++ P A A+LRAP++
Sbjct: 352 RLGLLLSEIGQAHGVVVSDQEMNRLIMQAAQQYSPQDRERFVQYVRQDPMAAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVT 437
EDKV+D + + +I DR V+
Sbjct: 412 EDKVVDFLFEKAEITDRAVS 431
>gi|82542924|ref|YP_406871.1| trigger factor [Shigella boydii Sb227]
gi|119370934|sp|Q325G5|TIG_SHIBS RecName: Full=Trigger factor; Short=TF
gi|81244335|gb|ABB65043.1| trigger factor [Shigella boydii Sb227]
gi|320186066|gb|EFW60811.1| Cell division trigger factor [Shigella flexneri CDC 796-83]
Length = 432
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 210/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K++ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDSAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD+ E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDSEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L ++ +++ TF++L + +
Sbjct: 405 EQAVEAVLAKAKVTEKETTFNELMNQQA 432
>gi|91787905|ref|YP_548857.1| trigger factor [Polaromonas sp. JS666]
gi|118574078|sp|Q12BY3|TIG_POLSJ RecName: Full=Trigger factor; Short=TF
gi|91697130|gb|ABE43959.1| trigger factor [Polaromonas sp. JS666]
Length = 436
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 95/449 (21%), Positives = 213/449 (47%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P N + + R++ + + GFRPGKVP++ + YG
Sbjct: 1 MAVTVETLEKLERKMTLTLPLNTIQSEVDTRLKRLARTVKMDGFRPGKVPMNVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E ++ R A +P I+ EG + +L +++
Sbjct: 61 SVHYEVMNDKVGEAFAVAANEAKLRVAGQPRISEKEGAPE---------GELVFDAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTVDYT 178
P ++I+ +V + EV + ID+ + + K F + + ++ GD+ T+D+
Sbjct: 112 YPDVKIADLTQAEVEKVSAEVSDAAIDKTVDILRKQRRTFAQRAADAPAQDGDRATIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D ++ QF+VG + E + + G+K+G+ K FP D+ KD+AGK
Sbjct: 172 GKIDGETFAGGKAEDFQFLVGEGQMLKEFEDAVRGMKSGESKTFPLNFPADYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++K++ + VN LA LG + A+R + +++ +F + + K
Sbjct: 232 QADFLVTVKKIEAAHLPEVNEALAKSLGIADGTVEALRADIKKNLEREVKFRLLARNKNA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + ++P+S V+ E + +++ R ++ K + I + + A++
Sbjct: 292 VMDALVANAELELPKSSVQAEVDRMIEGARADLKQRGIKDADKAPIPD---DVFRPQAEK 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + N ++ E++++ + + + + ++ + +AE+ A +
Sbjct: 349 RVRLGLVVAELVRANGLQAKPEQLKAHIEELAASY-EKPQDVVRWYLGDNRRMAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V + +L ++ D+ ++FD L +
Sbjct: 408 IENNVTEFVLGKAKVNDKAISFDDLMGQN 436
>gi|258625375|ref|ZP_05720272.1| trigger factor [Vibrio mimicus VM603]
gi|258582366|gb|EEW07218.1| trigger factor [Vibrio mimicus VM603]
Length = 433
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 87/449 (19%), Positives = 212/449 (47%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +D+ V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLEDIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + +VG G + I+ FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ R G A++ + +++ + ++ ++K Q +
Sbjct: 232 QFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L++ E + Q+ NV++ + + + AKRRV
Sbjct: 292 EGLVKANEIDVPSALIDQEIGVLRQQAAQRFGG------NVEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEEKVKALITEMATAY-EDPTEVVAYYEQNQQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ +D I+ ++ ++ ++F +L + +
Sbjct: 405 EQAVDAIIAKAKVTEKAISFSELMNPVAA 433
>gi|331005200|ref|ZP_08328594.1| Cell division trigger factor [gamma proteobacterium IMCC1989]
gi|330420982|gb|EGG95254.1| Cell division trigger factor [gamma proteobacterium IMCC1989]
Length = 438
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 97/449 (21%), Positives = 212/449 (47%), Gaps = 13/449 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + GL+R L V +P+ ++ +ER+++ I GFR GK PL IK YG+
Sbjct: 1 MQVSIETTSGLERRLTVGVPAEQIDSRADERLKEAAKNIRINGFRKGKAPLKVIKKQYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + ++I + + + A +P I I + E DL+ +++
Sbjct: 61 GVRQEILGDVINTSLQSAFEQEKVQPAGQPKIEITQ---------FESGKDLEYAAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ ++SFD+ V + ++ E +ID+ + + + + V E + GD V +DY +
Sbjct: 112 YPEVALASFDNFSVEKLAADITEADIDKMVESLREQQASLSVVERAAADGDSVNIDYLGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D + ++GS + + +VGL GD+K + FPED+ ++L G V
Sbjct: 172 KDGEEFAGGKAEKQDLVLGSNSMIPGFEDGVVGLSAGDKKTLSLSFPEDYHAEELKGAAV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V + VN +L + G + R + + + V+ KVK ++
Sbjct: 232 EFAVTVNSVSEKVLPEVNEELLKKFGADHGDLVKFREDIKKNMVRELATAVKNKVKTSVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + ++P++L+ +E + + +++ + Q +++D + A RRV
Sbjct: 292 DQLLEANAVELPKALIASETDALREQMMQQFGGMQQN-KDLDLKSLLPDDMFKEQADRRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N + V ++++ A+ + + +++++++ + P + + A + E
Sbjct: 351 GLGLLLSEVVKENKLSVDADKVRVAIEELAASY-DDPQEVINYYNQNPQLKSGMEASVLE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
D V+D I+ + ++ V++++ E
Sbjct: 410 DMVVDLIMGQATVTEKTVSYEEAISKDGE 438
>gi|304409710|ref|ZP_07391330.1| trigger factor [Shewanella baltica OS183]
gi|307304066|ref|ZP_07583819.1| trigger factor [Shewanella baltica BA175]
gi|304352228|gb|EFM16626.1| trigger factor [Shewanella baltica OS183]
gi|306912964|gb|EFN43387.1| trigger factor [Shewanella baltica BA175]
Length = 434
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 209/448 (46%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + ++ +A I GFRPGKVP++ I YG
Sbjct: 1 MQVSVEATQGLERRLTISVPAEQIEKLVKDSLQREAKRARIPGFRPGKVPITVINKRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + + E+++ E + A P+ + +++I
Sbjct: 61 AIRQDIMGEVMQRNFIEAIIAEKLNPAGAPTFVPGST----------DGEKFEFIATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V Q EV + ++D + + K + F E E+ GDKV +++ S
Sbjct: 111 YPEVELKGLDAIEVEQPKAEVTDADVDTMIETLRKQHATFAAVEREAADGDKVKMNFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + +GS + ++G K G++ I+ FPE++ ++L GK
Sbjct: 171 VDGEEFEGGKADDFELQLGSGRMIPGFEAGILGHKAGEEFVIDVNFPEEYHAENLKGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ + + + E ++ VK Q++
Sbjct: 231 KFAITLTEVQAANLPEVNDEFAALFGISEGGLEALKAEIRKNMNRELEQALKANVKEQVI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +P++L++ E N + Q+ + ++ E + + A RRV
Sbjct: 291 NGLLANNDITLPKALIDGEVNLLRQQAMQRFGNQ------TANMPELPAELFTEQAARRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E +Q + + +++ ++ + +R E
Sbjct: 345 KIGLLLGEVIKTNELKAEDERVQGLIASMASAY-EDPSEVVAYYNSNKELMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LKS ++ +++V F++ + ++
Sbjct: 404 EQAVEALLKSAKVTEKEVAFEEFMNKAT 431
>gi|260581529|ref|ZP_05849337.1| trigger factor [Haemophilus influenzae RdAW]
gi|260091827|gb|EEW75782.1| trigger factor [Haemophilus influenzae RdAW]
Length = 432
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 207/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAVREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFNAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + + D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVVKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K++ + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKIENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S VE E N + + Q++ + + + A RRV
Sbjct: 292 NGLIEQNPIDVPVSAVEEEINVLRNQAAQRFGGNEQQTAQL------PRELFEAEATRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + + N ++ EE ++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVIKSNELKADEERAKAMIADIASAY-EQPAEVVEYYSKNEELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD++ + +
Sbjct: 405 EQAVDAVLAKAQVTEKVSSFDEIMNPQA 432
>gi|153000121|ref|YP_001365802.1| trigger factor [Shewanella baltica OS185]
gi|166229935|sp|A6WLQ0|TIG_SHEB8 RecName: Full=Trigger factor; Short=TF
gi|151364739|gb|ABS07739.1| trigger factor [Shewanella baltica OS185]
Length = 434
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 209/448 (46%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + ++ +A I GFRPGKVP++ I YG
Sbjct: 1 MQVSVEATQGLERRLTISVPAEQIEKLVKDSLQREAKRARIPGFRPGKVPITVINKRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + + E+++ E + A P+ + +++I
Sbjct: 61 AIRQDIMGEVMQRNFIEAIIAEKLNPAGAPTFVPGST----------DGEKFEFIATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V Q EV + ++D + + K + F E E+ GDKV +++ S
Sbjct: 111 YPEVELKGLDAIEVEQPKAEVTDADVDTMIETLRKQHATFAAVEREAADGDKVKMNFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + +GS + ++G K G++ I+ FPE++ ++L GK
Sbjct: 171 VDGEEFEGGKADDFELQLGSGRMIPGFETGILGHKAGEEFVIDVNFPEEYHAENLKGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ + + + E ++ VK Q++
Sbjct: 231 KFAITLTEVQAANLPEVNDEFAALFGISEGGLEALKAEIRKNMNRELEQALKANVKEQVI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +P++L++ E N + Q+ + ++ E + + A RRV
Sbjct: 291 NGLLANNDITLPKALIDGEVNVLRQQAMQRFGNQ------TANMPELPAELFTEQAARRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E +Q + + +++ ++ + +R E
Sbjct: 345 KIGLLLGEVIKTNELKAEDERVQGLIASMASAY-EDPSEVVAYYNSNKELMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LKS ++ +++V F++ + ++
Sbjct: 404 EQAVEALLKSAKVTEKEVAFEEFMNKAT 431
>gi|15603840|ref|NP_246914.1| trigger factor [Pasteurella multocida subsp. multocida str. Pm70]
gi|13431913|sp|P57980|TIG_PASMU RecName: Full=Trigger factor; Short=TF
gi|12722414|gb|AAK04059.1| Tig [Pasteurella multocida subsp. multocida str. Pm70]
Length = 432
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 85/448 (18%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++GL+R + + +P++ + + E ++ + A + GFR GKVP I+ +G
Sbjct: 1 MSFTIETTQGLERRVQITVPADTVEGAVREELKRVAKTARVDGFRKGKVPPHIIEKRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + ++++ ++ ++ A RP+ + + E DL ++++
Sbjct: 61 SVRHDVLGDVLQSHFFNVVMEQKVNLAGRPAFAVEQ---------FEAGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + D ++V + + E+ E +ID+ + + K + + D+V +D+ S
Sbjct: 112 YPEVALQGLDQIKVEKPVVEISEADIDKMIDVLRKQQATWAETAEAASAEDRVVIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + E ++ +G + E +VG K G+Q +I+ FPE++ ++L GK
Sbjct: 172 VDGEVFEGGKAEDFTLFMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + ++ + ++ +R + +++ + + KVK Q++
Sbjct: 232 KFAITLKKVEVMVLPELTDEFVAKFGPNTKTVDDLRNEIRKNMQRELKNALTAKVKGQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP S VE E + + N + + + + AKRRV
Sbjct: 292 DGLLAQNAIDVPASAVEQEIEVLRGQAAQRFGG------NKEQAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + + ++V E ++ + + + ++++++ K + +R + E
Sbjct: 346 QVGLLLAEVIASHELKVDEARAKTMIEEIASAY-EQPAEVVEYYSKNKELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ +D +L Q+ ++ +FD + + +
Sbjct: 405 EQAVDAVLAKAQVTEKAASFDDVMNPQA 432
>gi|126173837|ref|YP_001049986.1| trigger factor [Shewanella baltica OS155]
gi|160874743|ref|YP_001554059.1| trigger factor [Shewanella baltica OS195]
gi|217973911|ref|YP_002358662.1| trigger factor [Shewanella baltica OS223]
gi|166229934|sp|A3D304|TIG_SHEB5 RecName: Full=Trigger factor; Short=TF
gi|189035954|sp|A9KWH6|TIG_SHEB9 RecName: Full=Trigger factor; Short=TF
gi|254789019|sp|B8E5F0|TIG_SHEB2 RecName: Full=Trigger factor; Short=TF
gi|125997042|gb|ABN61117.1| trigger factor [Shewanella baltica OS155]
gi|160860265|gb|ABX48799.1| trigger factor [Shewanella baltica OS195]
gi|217499046|gb|ACK47239.1| trigger factor [Shewanella baltica OS223]
gi|315266985|gb|ADT93838.1| trigger factor [Shewanella baltica OS678]
Length = 434
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 209/448 (46%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + ++ +A I GFRPGKVP++ I YG
Sbjct: 1 MQVSVEATQGLERRLTISVPAEQIEKLVKDSLQREAKRARIPGFRPGKVPITVINKRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + + E+++ E + A P+ + +++I
Sbjct: 61 AIRQDIMGEVMQRNFIEAIIAEKLNPAGAPTFVPGST----------DGEKFEFIATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V Q EV + ++D + + K + F E E+ GDKV +++ S
Sbjct: 111 YPEVELKGLDAIEVEQPKAEVTDADVDTMIETLRKQHATFAAVEREAADGDKVKMNFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + +GS + ++G K G++ I+ FPE++ ++L GK
Sbjct: 171 VDGEEFEGGKADDFELQLGSGRMIPGFEAGILGHKAGEEFVIDVNFPEEYHAENLKGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ + + + E ++ VK Q++
Sbjct: 231 KFAITLTEVQAANLPEVNDEFAALFGISEGGLEALKAEIRKNMNRELEQALKANVKEQVI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +P++L++ E N + Q+ + ++ E + + A RRV
Sbjct: 291 NGLLANNDITLPKALIDGEVNVLRQQAMQRFGNQ------TANMPELPAELFTEQAARRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E +Q + + +++ ++ + +R E
Sbjct: 345 KIGLLLGEVIKTNELKAEDERVQGLIASMASAY-EDPSEVVAYYNSNKELMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LKS ++ +++V F++ + ++
Sbjct: 404 EQAVEALLKSAKVTEKEVAFEEFMNKAT 431
>gi|89068314|ref|ZP_01155724.1| trigger factor [Oceanicola granulosus HTCC2516]
gi|89046231|gb|EAR52289.1| trigger factor [Oceanicola granulosus HTCC2516]
Length = 445
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 130/455 (28%), Positives = 237/455 (52%), Gaps = 10/455 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E ++GLKR + + + L D ++++ + +KGFR GKVP++ +K YG
Sbjct: 1 MQVTETLNDGLKRGYQITVTAAELDDKVLSKLKEAQPGIEMKGFRKGKVPMALLKKQYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E + V L + R AM+PS+ +N + + D+ + + Y+
Sbjct: 61 RLMGEAMQESVDGAVSSHLEETGHRPAMQPSMKMN-------NEDWKEGDDVVVDVEYET 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+I F + + + + + D+ + + +AK+ FE K+ +E GD+V +D+
Sbjct: 114 LPEIGEIDFSTISIERLVAKADDASVQDALENLAKSAQTFETKDGAAEDGDQVVIDFVGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E S ++ ++GS E L G+ GD+K IE FPED+ + LAG+ V
Sbjct: 174 KDGEAFEGGSAEDYPLVLGSNAFIPGFEEQLSGVAAGDEKTIEITFPEDYQAEHLAGQAV 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV +P ++++LA R G + ++ S++++ + R KR++LD
Sbjct: 234 TFDVTVKEVKAPAEAAIDDELAKRYGADDLDGLKAQISERLEAEYQGAARAVAKRRLLDA 293
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ K F++P+ LV+ E I ++ E N + + D E + + LA+RRV
Sbjct: 294 LDEKVNFELPKGLVDAEARQIAHQLWHE---ENPEHEGHDHPAIEPTEEHQKLAERRVKL 350
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+ L IG+KN ++VT+ EM A+ Q ++PG E++ + Q+ P +L+APIFEDK
Sbjct: 351 GLFLAEIGQKNEVQVTDAEMTQAVMNQARQYPGQERQFFEFVQQNPQMRQQLQAPIFEDK 410
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
V+D I + + +++V+ ++L + E
Sbjct: 411 VVDLIFEKADVTEKEVSKEELQAAVEKLDDEDFAA 445
>gi|258621301|ref|ZP_05716335.1| trigger factor [Vibrio mimicus VM573]
gi|258586689|gb|EEW11404.1| trigger factor [Vibrio mimicus VM573]
Length = 433
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 87/449 (19%), Positives = 211/449 (46%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPIFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +D+ V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLEDIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + +VG G + I+ FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ R G A++ + +++ + ++ ++K Q +
Sbjct: 232 QFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L++ E + Q+ NV++ + + + AKRRV
Sbjct: 292 EGLVKANEIDVPSALIDQEIGVLRQQAAQRFGG------NVEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEEKVKALITEMATAY-EDPTEVVAYYEQNQQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ +D I+ ++ ++ ++F +L + +
Sbjct: 405 EQAVDAIIAKAKVTEKAISFSELMNPVAA 433
>gi|261210564|ref|ZP_05924857.1| cell division trigger factor [Vibrio sp. RC341]
gi|260840349|gb|EEX66920.1| cell division trigger factor [Vibrio sp. RC341]
Length = 433
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 88/449 (19%), Positives = 212/449 (47%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + + V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLESIAVEKPSAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E +N +G+ + + +VG G + I+ FPE++ ++L GK
Sbjct: 172 IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVNFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ R G A++ + +++ + ++ ++K Q +
Sbjct: 232 QFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L++ E + Q+ NV++ + + + AKRRV
Sbjct: 292 EGLVKANEIDVPSALIDQEIGVLRQQAAQRFGG------NVEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIRTHELKADEEKVKALITEMATAY-EDPTEVVAYYEQNQQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ +D I+ Q+ ++ ++F +L + +
Sbjct: 405 EQAVDAIIAKAQVTEKAISFSELMNPVAA 433
>gi|114321438|ref|YP_743121.1| trigger factor [Alkalilimnicola ehrlichii MLHE-1]
gi|122311051|sp|Q0A6A6|TIG_ALHEH RecName: Full=Trigger factor; Short=TF
gi|114227832|gb|ABI57631.1| trigger factor [Alkalilimnicola ehrlichii MLHE-1]
Length = 450
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 101/466 (21%), Positives = 227/466 (48%), Gaps = 18/466 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL R + V +P+ ++ + ++R+ +R + GFRPGKVPL ++ YG
Sbjct: 1 MQVSVETTEGLGRRMTVQVPAEQVEEKVDQRLRSLRGNVRMDGFRPGKVPLKVVRKRYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E+++ E L +++ R A P I + E DL+ + ++++
Sbjct: 61 QVRGEVLSELVQSTYSEALREKELRPAGNPEIEPKQT---------EEGKDLEYQATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP E++ D ++V + E+ + ++D + + K + + S+ GD+V +D+ +
Sbjct: 112 LPSFEVTGLDQIKVERPQVEITDADVDEVLERLRKQQAEYNEVDRASQEGDRVVIDFKGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD +V ++G+ + E L G+K GD+ IE FPE+ ++AGK
Sbjct: 172 VDGEEFSGNEGNDVPVVLGAGQMPPAFEEGLTGVKAGDETTIEHTFPEEFPDSEVAGKAG 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V +P +++ A ++G + +R +++ + V +VK Q++
Sbjct: 232 QFAVTVKTVEAPEYPEIDDAFAEKVGVKEGGVEKLREAIKTNLERERDQTVASRVKHQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + ++P+ LV+ E + + + Q+ + D+ + A+RRV
Sbjct: 292 DQLLDITDIELPKVLVDAEIDQ-----LRQQEQSRQQQSGQEEPDDLPAALFEENARRRV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + N+I++ + + +L + + +++L ++ + + + + E
Sbjct: 347 ALGLIVNELVRSNDIKLDRDRVMQSLQEMAAGY-EQPEEVLRYYAQNRQLMEGVEVAVLE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQ 464
D+V+D++++ Q+ D+ ++ +L + E +S + ET +
Sbjct: 406 DQVVDYVVQQAQVEDKPMSLQELMSPQ-QPEAESAEGESKQDETKE 450
>gi|329890028|ref|ZP_08268371.1| trigger factor [Brevundimonas diminuta ATCC 11568]
gi|328845329|gb|EGF94893.1| trigger factor [Brevundimonas diminuta ATCC 11568]
Length = 447
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 127/440 (28%), Positives = 235/440 (53%), Gaps = 7/440 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV+EK +EGL R + V IP+ L + RI+++ + +KGFRPGKVP SH+K +G+
Sbjct: 1 MQVVEKSNEGLSRVIAVTIPAAELNEKLEARIKEMAPQMKLKGFRPGKVPASHVKKTFGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E I+ + E L + R A + + + +G DL +S ++
Sbjct: 61 DFMGEIINASLNETSQGALEELKIRPAAPAEMKLTSDMDKVIAGQ----EDLAYEMSLEV 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---EIGDKVTVDY 177
+P+ L++T+ E ++++D + E+A ++E K+ ++ GD++T+D+
Sbjct: 117 MPEFTPVDPKTLKLTRPTYEASDEDLDEALKELASQAKSYEDKKGKTVKAADGDQLTIDF 176
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D + + + ++GS E L G K G++K IE FPE++ K LAG
Sbjct: 177 LGKIDGEAFDGGAATDADLVIGSGRFIPGFEEQLKGAKVGEEKTIEVTFPEEYQAKHLAG 236
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + ++K + + + ++++ A R+G ES ++ L + Q R K+KR +
Sbjct: 237 KAATFDVTVKAIKAEVESKIDDEFAKRIGLESLDQLKELLKSNLNQQYAGATRFKLKRAL 296
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + + F +P +V+ E+ GI +V + + + ++E Y +A+RR
Sbjct: 297 LDVLDEGHDFPLPPKMVDAEFEGIWAQVSADKDAGQLPEDDAKKSEDELKAEYKKIAERR 356
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL IG NN+ V+++E+ +A+ + +PG E+ +LD +++ PNA A+LRAPI+
Sbjct: 357 VRLGLVLAEIGRANNVGVSDQELSNAIMAEARNYPGQERMVLDFYRQNPNAAAQLRAPIY 416
Query: 418 EDKVIDHILKSVQIVDRKVT 437
E+KV+D I+ ++ D ++
Sbjct: 417 EEKVVDLIVSVAEVKDEAIS 436
>gi|113461574|ref|YP_719643.1| trigger factor [Haemophilus somnus 129PT]
gi|170718339|ref|YP_001783567.1| trigger factor [Haemophilus somnus 2336]
gi|123327377|sp|Q0I4F2|TIG_HAES1 RecName: Full=Trigger factor; Short=TF
gi|189035941|sp|B0UW21|TIG_HAES2 RecName: Full=Trigger factor; Short=TF
gi|112823617|gb|ABI25706.1| FKBP-type peptidyl-prolyl cis-trans isomerase, trigger factor
[Haemophilus somnus 129PT]
gi|168826468|gb|ACA31839.1| trigger factor [Haemophilus somnus 2336]
Length = 432
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 85/448 (18%), Positives = 211/448 (47%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++GL+R +++ +PS + + E ++ + A I GFR GKVP I+ +G
Sbjct: 1 MSFNIETTQGLERRVNITVPSEAVEQAVREELKRVAKNARIDGFRKGKVPAQMIEKRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++++ ++ + A RP T+ + E +LK ++++
Sbjct: 61 SVRQDVLGDLLQKHFFNVMLENKVNLAGRPEFTVEQ---------FEAGKELKFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ D ++V + + E+ + +ID+ + + K + + ++ D+VT+D+ S
Sbjct: 112 YPEVQLQGLDKIKVEKPVVEISDADIDKMLDILRKQQATWIETQDVAKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E ++G K G+Q EI FPE + ++L GK
Sbjct: 172 VDGEEFEGGKSTDFVLAMGQGRMIPGFEEGIIGHKAGEQFEINVTFPETYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K+V + ++ + G +++ +R ++ +++ + + ++K Q++
Sbjct: 232 KFSITLKKVEVMQLPELTDEFVAKFGPNTKNVADLRNEIAKNMQRELKNALVSRIKTQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +VP + VE E + + N + + + AKRRV
Sbjct: 292 DGLLEQNPIEVPTAAVEQEIEVLRNQAAQRFGG------NAQQAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ + N ++ EE +++ + + ++++++ K + +R + E
Sbjct: 346 QVGLLFSEVISSNELKADEERVKAMIADIASAY-EQPAEVIEYYSKNKELMNNIRNVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ +D +L Q+ ++ +FD++ + +
Sbjct: 405 QQAVDAVLTKAQVTEKASSFDEVMNPQA 432
>gi|323139087|ref|ZP_08074145.1| trigger factor [Methylocystis sp. ATCC 49242]
gi|322395651|gb|EFX98194.1| trigger factor [Methylocystis sp. ATCC 49242]
Length = 449
Score = 254 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 155/450 (34%), Positives = 265/450 (58%), Gaps = 3/450 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + S+GLK+E V++P+ L ++ ++++KA IKGFRPGK P+ H+K LYGK
Sbjct: 1 MQVTQTSSQGLKQEFKVVLPAADLAAKLGAQLAEVQAKAQIKGFRPGKAPIGHLKKLYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+ + + E + E +I+ R A+ P + G + +E DL ++++
Sbjct: 61 SIMGDVLQEAVNEANRKIVEDHQLRIAVEPKLDFP-GGQEEVERALEAEGDLSFVVTFET 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP IEI SFDD+ + + + +V +++I++ + +A+ FE +E ++E GDK+T+D+T
Sbjct: 120 LPTIEIGSFDDISLERPVAQVSDEDIEKALKSLAERAQEFEAREEGAKAEKGDKLTIDFT 179
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D V E + +V ++GSA E L G G+Q+ ++ FPED+S K LAGK
Sbjct: 180 GKLDGVPFEGGTGGDVDIVLGSATFIPGFEEQLEGAAAGEQRLVKVKFPEDYSAKHLAGK 239
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V +P + ++ +LA + GFES AM+ ++ + R K+KR +L
Sbjct: 240 DAEFDVTVKSVAAPKALGLDEELAKKYGFESLEAMQTAVRGNLEADFDKASRDKMKRALL 299
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +Y+F++PE+LVE+E+N I + E A + +EE + +A+RRV
Sbjct: 300 DALDGRYSFELPETLVEHEFNNIWGQHEQESKRAGRPLAEEGKTEEETRAEFRKIAERRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IG+ ++V ++++ AL ++ FPG EK++ D ++ ALA+LRAPI+E
Sbjct: 360 RLGLVLAEIGQNAGVKVEDKDLTEALVERARMFPGQEKQVWDFYRNNEQALAQLRAPIYE 419
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++V+DHI K ++I D+ VT D+LF E+
Sbjct: 420 ERVVDHIAKLIKITDKTVTRDELFAEEEEA 449
>gi|301631593|ref|XP_002944882.1| PREDICTED: trigger factor-like [Xenopus (Silurana) tropicalis]
Length = 501
Score = 254 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 98/450 (21%), Positives = 208/450 (46%), Gaps = 17/450 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + + + + N+RI+ + + GFRPGKVPLS + YG+
Sbjct: 65 MAVTVETLEKLERKITLSLHRSTVQTEVNDRIKRLARTVKMDGFRPGKVPLSVVTQRYGE 124
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + +++ +++ + + + R A RP I +G + + ++++
Sbjct: 125 SVEFDVLNDRLRDAFAQAVEEIQLRVAGRPIIVEKDGAPE---------GQMTFDATFEV 175
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P+++I+ D ++ + EVDE I++ + + K F + +E GD+VTVD+
Sbjct: 176 FPEVKIADLSDTEIVRLSAEVDEAAIEKTLNILRKQRRTFAQRAQTAPAEEGDRVTVDFE 235
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + ++ QF+VG + E + + G+K G+ K FPE + KD+AGK
Sbjct: 236 GKVDGEPFQGGKAEDFQFLVGEGQMLKEFEDAVRGMKPGESKTFPLVFPESYYAKDVAGK 295
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K+ + V+ L + +R + +++ + + K+
Sbjct: 296 TADFLVTLKQTEAVSLPEVDEQFVKSLNIADGTVDGLRADIKKNLEREVRHRLLARNKKA 355
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + K FD+P ++++ E +L R + K + I E + A+R
Sbjct: 356 VMDVLVAKAEFDLPNAIIKEEIARLLGDARDGLKQRGIKDADKAVIPE---EVVRPQAER 412
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V +VL + N ++ T E+++S + + + + ++ + LAE+ +
Sbjct: 413 SVCLALVLAELVATNALQATPEQIKSHVDELAASY-ERPEDVVRWYYGDRQRLAEVEHVV 471
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ D IL +++D+ V+F++L
Sbjct: 472 VQNNATDFILGKAKVIDKTVSFEELMGQRD 501
>gi|304391719|ref|ZP_07373661.1| trigger factor [Ahrensia sp. R2A130]
gi|303295948|gb|EFL90306.1| trigger factor [Ahrensia sp. R2A130]
Length = 448
Score = 254 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 165/446 (36%), Positives = 275/446 (61%), Gaps = 1/446 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKRE+ V++P+ + + ++ D++ K I GFRPGKVP+SH+ LYGK
Sbjct: 1 MQVTETLNEGLKREITVLVPATDMVAERDAKLFDLKDKVKINGFRPGKVPMSHVTKLYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ E ++E I + E+L +R E+AA +P IT+ E E++ + G D + ++SY+I
Sbjct: 61 SVMGEMVNETIDKRTSELLKERGEKAAQQPKITMTEDEAEAEEI-LSGNKDFEFKVSYEI 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P E++ L++ + + +V ++EID Q+ IA+NN ++ K+ ++ GD+VT+DY
Sbjct: 120 IPAFEVADMKGLKIERPVVDVSDEEIDEQVKRIAQNNASYSTKKGKAADGDRVTMDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + ++GS E L G K GD+K+I+ FPE++ LAGK
Sbjct: 180 VDGEPFEGGKDEGAKLVIGSGQFIPGFEEQLTGTKAGDEKDIKVTFPEEYQAAHLAGKDA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
I E+ + + +++++A LG +S ++ + +I+ R KVKRQ+LD
Sbjct: 240 VFEVKIHEIEAADDLKIDDEMAKTLGLDSLDKLKEVIKGQIESQYGTQTRAKVKRQLLDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ YTFD+PE +VE E+N I ++ ++ A + ++ D+ +E+ + Y LAKRRV
Sbjct: 300 LDEAYTFDLPEGMVEQEFNNIWTQITNDLQQAGKSFEDEDTTEEKAKEDYMKLAKRRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTE E+Q AL QQ+ ++PG EK++ + F+ P+A+ +RAPIFE+K
Sbjct: 360 GLVLAEIGEKAEVEVTEAELQQALMQQVQQYPGQEKEVYEFFRSNPDAVGSMRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSS 446
V+DHIL+S + D+ VT ++L ++
Sbjct: 420 VVDHILESADVTDKTVTKEELMEDDE 445
>gi|88705171|ref|ZP_01102883.1| Trigger factor [Congregibacter litoralis KT71]
gi|88700866|gb|EAQ97973.1| Trigger factor [Congregibacter litoralis KT71]
Length = 442
Score = 254 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 96/454 (21%), Positives = 205/454 (45%), Gaps = 15/454 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R L V +P+ + +ER+ + GFRPGKVPL ++ +G
Sbjct: 1 MQVSIETTSKLERRLTVGVPAETVDSQVDERLRQAVKNVRLPGFRPGKVPLKVMRQRFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E++ E +++ + A +P+I + DL+ ++++
Sbjct: 61 GVRQEVLGEVMSRSFQEAVTQEKLKPAGQPTIEPRNM---------DAGKDLEYIATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +E+ D V + EV +++D + K ++E E +E D+V +D+ +
Sbjct: 112 FPDVEVVELKDYPVEKPAAEVTAEDVDNIIEVFRKQRGSWETVERAAEKEDRVNIDFEGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E S + +GS + + +VG+ G++K + FP+D+ +L G V
Sbjct: 172 RDGEAFEGGSAEGSDLELGSGQMIPGFEDGIVGMSAGEEKVLSLSFPDDYHADELKGAAV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +V ++ +L G E E+ R Q + + V +VK+Q++
Sbjct: 232 EFKVKVNKVEEMQLAPLDAELYAAYGLEGDDEAEFRAEVEQNMARELRNAVDARVKKQVM 291
Query: 299 DYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D + Y+ +VP +L+ E + + ++ + + +D + A RR
Sbjct: 292 DAVIEAYSDLEVPAALISQETDALRNQMFQQF--GGSAPEGMDLKSILPDDMFAENAARR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL + ++ EE +++A+ + + +++++ + LA + + +
Sbjct: 350 VKLGLVLAELIAHFELKADEEAIKAAVEEIASTY-QDPEEVVNWYFGNQEQLAAVESKVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
EDKV+D +L+S I ++ T+ + +++ +
Sbjct: 409 EDKVVDRLLESAAISEKACTYQEAIALGQQANQQ 442
>gi|197284026|ref|YP_002149898.1| trigger factor [Proteus mirabilis HI4320]
gi|227358103|ref|ZP_03842445.1| Trigger factor [Proteus mirabilis ATCC 29906]
gi|238693152|sp|B4EU52|TIG_PROMH RecName: Full=Trigger factor; Short=TF
gi|194681513|emb|CAR40390.1| Trigger factor [Proteus mirabilis HI4320]
gi|227161838|gb|EEI46870.1| Trigger factor [Proteus mirabilis ATCC 29906]
Length = 434
Score = 254 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 89/446 (19%), Positives = 205/446 (45%), Gaps = 18/446 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + +P+ + + + ++ I GFR G VP+S +K YG
Sbjct: 1 MQVSVETTQGLGRRVTITVPAADIQKAVDSELKKAAKTVRIDGFRKGHVPMSMVKQRYGM 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L++ + ++++ + + P D + D + +++
Sbjct: 61 SVLNDVLGDLMQRNFINAIIENKVNPVGAP---------DYKPEQYKEGEDFVYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ + ++V + I V ++++D + + K ++ KE E D+VTVD+ S
Sbjct: 112 FPEIELKDLESIEVVKPIVTVKDEDVDNMLETLRKQQAEWKDKEGEVAAEDRVTVDFNGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ +G + E L+G K G++ I+ FPED+ ++L GKK
Sbjct: 172 IDGEEFEGGKAEDFVLAMGQGRMIPGFEEGLIGHKAGEEFTIDVTFPEDYHAENLKGKKA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G +R + +++ + +R +VK Q++
Sbjct: 232 QFAINLKKVEERELPELTEEFIKRFGIADGSVDGLRAEVRKNMERELKNAIRTRVKSQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP + V++E + ++ + + + + AKRRV
Sbjct: 292 DGLVKANEVDVPAAAVDSEIEVLQRQAAQRFGG------DEKQALQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ +E +++ + + + ++++ + K + +R E
Sbjct: 346 IVGLLLGEVINSNELKAEDERVKALIDEMASAY-EDPSEVVEFYNKNEQLMNNIRNLALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
++ ++ IL + ++ +++ F +L +
Sbjct: 405 EQAVEKILATAKVTEKETNFTELMNE 430
>gi|254284118|ref|ZP_04959086.1| trigger factor [gamma proteobacterium NOR51-B]
gi|219680321|gb|EED36670.1| trigger factor [gamma proteobacterium NOR51-B]
Length = 442
Score = 254 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 99/448 (22%), Positives = 204/448 (45%), Gaps = 15/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + + GL+R L V +P+ R+ + R++D + GFRPGKVP+ +K +G
Sbjct: 1 MRVSIETTSGLERRLTVGVPAERVDGAVQSRLQDAAKNVRLPGFRPGKVPMRVMKQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E+I + E + + R A +P I E DL+ ++I
Sbjct: 61 GVRQEVLGEVISQTFQEAVVQEQLRPAGQPRIE---------PRNFEPGNDLEYVAVFEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +++ D V + EV + ++D + K + E GD V +D+ +
Sbjct: 112 FPTLDVKQADGFAVKKPTAEVTDSDVDEIIEVFRKQQGQQVAVDRAGEEGDTVIIDFEGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E S ++ +GS+ + E ++GL G+ ++ FPED+ +DL G V
Sbjct: 172 RDGEAFEGGSGEDFSLELGSSRMIPGFEEGIIGLSAGENTVLDLTFPEDYQAEDLQGADV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++KEV + ++ L G E E+ R + +++ V+ VK+Q++
Sbjct: 232 QFKITVKEVKALELAPLDEKLFASYGVEEGGEAVFRDEVRKNMERELRNAVQNHVKQQVM 291
Query: 299 DYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D I +VP SL+ E +G+ Q++ + N + ++ SI + + A+RR
Sbjct: 292 DAIVEANPELEVPSSLIAQEIDGMRQQMMQQFGGGNTQELDLKSI--LPDEMFKEQAERR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+++ + K ++ +++ + + +++++ + LA + + +
Sbjct: 350 VKLGLLMSELVSKLELQADSAKVRELIEDIASTY-QEPEEVINWYYSENEQLAAVESRVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+D +L + + ++ + +
Sbjct: 409 EDQVVDTLLAGATVEEEACSYQEALAAA 436
>gi|309787028|ref|ZP_07681640.1| trigger factor [Shigella dysenteriae 1617]
gi|308924606|gb|EFP70101.1| trigger factor [Shigella dysenteriae 1617]
Length = 432
Score = 254 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD+ E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDSEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 EGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ + +L ++ +++ TF++L + +
Sbjct: 405 EQAAEAVLAKAKVTEKETTFNELMNQQA 432
>gi|152980268|ref|YP_001353220.1| trigger factor [Janthinobacterium sp. Marseille]
gi|166229894|sp|A6SY73|TIG_JANMA RecName: Full=Trigger factor; Short=TF
gi|151280345|gb|ABR88755.1| peptidyl-prolyl cis-trans isomerase (trigger factor)
[Janthinobacterium sp. Marseille]
Length = 449
Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 95/461 (20%), Positives = 211/461 (45%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + +R++ GFR GKVP+ + YG
Sbjct: 1 MATAVETLDKLERRITITVPLADVQAEVEKRLKVRARTVKAPGFRTGKVPMKMVAQQYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E +++ + E S+ + R A P I + ++++
Sbjct: 61 QVENEVLNDKVGRAFNEAASENNLRVAGFPKIEPKT-------DDAAAEGTIVFNATFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++++ V + EV E EID+ + + K V + VK +S
Sbjct: 114 YPEVKLGDLAAADVEKTTVEVSEAEIDKTIDILRKQRVHYHVKGEQSAHGDGGSDLTAKN 173
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VT+D+ ++D V + ++ F++G + +E +GLK G+ K FP D
Sbjct: 174 GDRVTIDFVGTIDGVEFQGGKAEDYAFVLGEGRMLAEFEAGTIGLKVGESKTFPLAFPAD 233
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEF 287
+ KD+AGK ++K++ V+ + A LG MR +++
Sbjct: 234 YHGKDVAGKTAEFTITLKQIEWAHLPEVDAEFAKSLGIPDGDLQKMREDIKVNLQREVSS 293
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
++ + K ++D + DVP++L++ + +++ R +M+ K ++ E
Sbjct: 294 RIKARTKDSVMDALIKISELDVPKALIDQDVERLMEMTRQDMAQRGMKVSDLPFPPELFT 353
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A+RRV G++L + + N+++ E++++ + + + +++L ++ +
Sbjct: 354 E----QAERRVRLGLILAEVVKANDLQAKPEQVKAQVEEFAQSY-EDPQQVLKYYFSDRS 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E+ V++++L ++ ++ V FD+L N++++
Sbjct: 409 RLAEVEALVLEENVVNYVLGKAKVTEKPVAFDELMSNNAQA 449
>gi|87121309|ref|ZP_01077199.1| trigger factor [Marinomonas sp. MED121]
gi|86163466|gb|EAQ64741.1| trigger factor [Marinomonas sp. MED121]
Length = 444
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 89/460 (19%), Positives = 221/460 (48%), Gaps = 18/460 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + ++R L + +P+ R+ + + + I GFR GKVP+S +K YG+
Sbjct: 1 MQVSVETTSTIERVLTISVPAARIEEKVSAEVAKTAKTVRIDGFRKGKVPVSVVKKRYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +++I+++ E + K + + A PSI + E DL+ ++
Sbjct: 61 GIRLEAVEQIMRDAYVEAVQKEELQPAGMPSIEPKKM---------EEGADLEFVAKVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P IE++ + + + EV + ++D + + K N + E E+ GD+V +D+
Sbjct: 112 YPTIELNDLTKVSAERVLSEVTDADLDTMLETLRKQNADWNAVEREAADGDQVVIDFVGY 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + E + + + ++GS + + ++G K G++K I FPED+ ++L G++
Sbjct: 172 LGDEAFEGGAAEGHKLVLGSGTMIPGFEDGILGTKAGEEKTISVTFPEDYQAENLKGQEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ EV + +++ + G + A+R + +++ V+ K+K +
Sbjct: 232 SFKITVTEVAEQVLPELDDAFVEKFGLAEGTLDALRAEVRKNMERELNQAVKGKLKTGLF 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP+++V+ E + + ++ + + + + + A +R
Sbjct: 292 DSLVELNPIEVPQTVVDQEIDVLRKQAAQQFGGEGFDASQL------PGELFQEEASKRA 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + + N+I+V ++ +++ L + ++++D + K L+++++ + E
Sbjct: 346 KLGLLISEVVKVNDIKVEDDRVRAFLEDMAQAY-QEPQQVIDFYLKNKEQLSQVQSAVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSS 458
++V+D +L+S Q+ + + ++ ++ ++ E + +
Sbjct: 405 EQVVDKLLESAQVTEVTLGYEDAIKPNAPATAEVEEGEEA 444
>gi|264677386|ref|YP_003277292.1| trigger factor [Comamonas testosteroni CNB-2]
gi|299533084|ref|ZP_07046470.1| trigger factor [Comamonas testosteroni S44]
gi|262207898|gb|ACY31996.1| trigger factor [Comamonas testosteroni CNB-2]
gi|298718969|gb|EFI59940.1| trigger factor [Comamonas testosteroni S44]
Length = 436
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 107/449 (23%), Positives = 217/449 (48%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + + R++ + + GFRPGKVP+S + YG
Sbjct: 1 MAVNVETLEKLERKITLSVPLSAIQSEVDARLKKVARTVKMDGFRPGKVPMSVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E +++ D R A +P IT EG + + + +++
Sbjct: 61 SVQYEVLNDKVGEAFAAAVNEADLRVAGQPKITEKEGAPE---------GEAQFDAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE--TESEIGDKVTVDYT 178
+P+++I +V + VD+ ID+ + + K F + + GD+VTVD+
Sbjct: 112 MPEVKIGDLTAAEVEKLSTSVDDAAIDKTVDILRKQRRTFTERAAGEAAVDGDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D ++ QF+VG + E + G+K G+ K FP D+ D+AGK
Sbjct: 172 GKIDGETFSGGKAEDFQFLVGEGQMLKEFEDATRGMKAGESKTFPLAFPADYHGADVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K+V +P VN + LG + S A+R + +++ +F V+ + K+
Sbjct: 232 TADFLVTVKKVEAPNLPEVNEEFVKTLGVDGGSVEALRDDIKKNLEREVKFRVQGRNKQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + + D+P++ V+ E +L+ R E+ K E + A+R
Sbjct: 292 VMDALVSVAELDLPKASVQAEVGRLLEGARAELEQRGIKDAAKA---EIPEDIFLPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + + NN++ T E++++ + + + + ++ + N LAE+ A +
Sbjct: 349 RVRLGLVVAELVKTNNLQATAEQIKAHVEELASSY-EKPEDVVRWYFGDRNRLAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V + +L ++ D+ V+FD+L +
Sbjct: 408 IENNVTEFVLGKAKVTDKAVSFDELMGQA 436
>gi|119503322|ref|ZP_01625406.1| Ankyrin [marine gamma proteobacterium HTCC2080]
gi|119460968|gb|EAW42059.1| Ankyrin [marine gamma proteobacterium HTCC2080]
Length = 441
Score = 253 bits (646), Expect = 4e-65, Method: Composition-based stats.
Identities = 101/453 (22%), Positives = 214/453 (47%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + + GL+R L + +P++R+ + +R+ + + GFRPGKVP+ ++ +G
Sbjct: 1 MRVSIETTSGLERRLTIGVPADRVDGAVAQRLSEAARNVRLPGFRPGKVPMKVMQQRFGG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I E+I + E + R A +P I +E D++ +++I
Sbjct: 61 GIRQEVIGEVINQSFQEAVISEKLRPAGQPRIE---------PRALEAGRDVEYTATFEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +EI+ DL++ + + EV+ ++D + K + E +E GD V +D+ +
Sbjct: 112 FPTLEINEITDLKIERPVAEVNSTDVDEIIEIFRKQRGELKDVERAAETGDTVLIDFAGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D + + ++ +GS + + +VG+ GDQK I+ FP+D+S ++L G
Sbjct: 172 RDGEAFDGGTGEDHSLELGSGKMIPGFEDGIVGMSAGDQKSIDVTFPDDYSSEELQGADA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ K V + ++ +L G E E R + +++ V+ +K Q++
Sbjct: 232 AFAITCKSVKALELAPLDEELFASYGVEEGGEPVFREEVQKNMERELRNAVQTHIKNQVM 291
Query: 299 DYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D + + ++P SLV E +G+ ++ + ++ SI + + A+RR
Sbjct: 292 DGVVAAHEDIEIPSSLVAQEIDGMRGQMFQQFGGQAAPEMDLKSI--LPDEMFKDQAERR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G++LG + K + +++ A+ + +++++ + LA++ + +
Sbjct: 350 VKLGLLLGEMITKFELRADPAKVKEAIEDIASTY-QEPEEVINWYYSENEQLAQVESRVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
ED+V+D IL+ +I D++ T+ + + +
Sbjct: 409 EDQVVDKILEGAEIEDQQSTYQEALAAARPAQS 441
>gi|261253460|ref|ZP_05946033.1| cell division trigger factor [Vibrio orientalis CIP 102891]
gi|260936851|gb|EEX92840.1| cell division trigger factor [Vibrio orientalis CIP 102891]
Length = 434
Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats.
Identities = 89/450 (19%), Positives = 211/450 (46%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVPL + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E DL ++++
Sbjct: 61 AVRQDVMGEVMQRHFIEAIVKEKINPAGAPTFAPVEST---------EGQDLVFNATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + + V + EV + +++ + + K + E +E G + T+D+ S
Sbjct: 112 YPEVELKGLESITVEKPTTEVQDSDVEEMIDTLRKQQATWAEVEEAAEEGKRATIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + EI+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIAGKTAGMEFEIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + +++ + ++ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVSKFGVAEGGVDALKAEVRKNMQRELKQAIKNRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E + Q+ N ++ + + + AKRRV
Sbjct: 292 DGLVKENDIDVPAALIDQEIGTLRQQAAQRFGG------NPEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ +E++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADDEKVKALIEEMATAY-EDPTEVVSYYEQNEQMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ID I+ Q+ +++V+F++L + +
Sbjct: 405 EQAIDAIISKAQVSEKEVSFNELMNQQPAA 434
>gi|83745912|ref|ZP_00942969.1| Trigger factor, ppiase [Ralstonia solanacearum UW551]
gi|83727602|gb|EAP74723.1| Trigger factor, ppiase [Ralstonia solanacearum UW551]
Length = 506
Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats.
Identities = 90/460 (19%), Positives = 199/460 (43%), Gaps = 24/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ + +P + R+ + + GFRPGKVP+ ++ YG+
Sbjct: 58 MSTVIENLGKLDRKVTLAVPKAEVEQEKQSRLARLSKTVKMSGFRPGKVPMKMVEKQYGQ 117
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + +I +++ + A +P + + ++++
Sbjct: 118 QVEMEVRFDKAARQFFDITNEQGVKVAGQPRFELKTEGV--------SDDQVAFDATFEV 169
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------G 170
P++ + ++T+ E+ + EID+ + + K V + + E G
Sbjct: 170 YPEVALGDLAGAELTRTKTEITDAEIDKTIDILRKQRVHYHPRGEAGEHGDGGEAVAQNG 229
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
D+VTVD+ ++D V + F++G + E + +GLK G+ K FP D+
Sbjct: 230 DRVTVDFVGTIDGVEFAGGKAEGFGFVLGEGRMLPEFEQATLGLKQGESKVFPLAFPADY 289
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFL 288
KD+AGK ++K+V +N A LG MR + +++ +
Sbjct: 290 HGKDVAGKTAEFTVTLKQVEWAHLPEINEAFAQSLGIADGSLDKMRADIRENLEREVKRR 349
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
+K Q++D + DVP+SL+E + +++ R ++ + + +
Sbjct: 350 THALLKDQVMDALLKVAELDVPKSLIEQDQERLVEMARRDLEARGMPN---VKNMPIPAE 406
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 407 MFAQQAERRVKLGLVLAEVVKANGLEAKPEQVKAEIEEFAKSY-EDPKEVIRWYYGDQQR 465
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E+ V++ + ++ D+ ++F++L +
Sbjct: 466 LAEMEAYVLENNVVNFVCDKAKVTDKAMSFEELTAAPAAQ 505
>gi|56697149|ref|YP_167512.1| trigger factor [Ruegeria pomeroyi DSS-3]
gi|67461636|sp|Q5LR43|TIG_SILPO RecName: Full=Trigger factor; Short=TF
gi|56678886|gb|AAV95552.1| trigger factor [Ruegeria pomeroyi DSS-3]
Length = 443
Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats.
Identities = 129/453 (28%), Positives = 244/453 (53%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR ++++ + L NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 1 MQVTETLNEGLKRGYNIVVSAAELDAKVNEKLVEAQPEIEMKGFRKGKVPMALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + E I + + +R A++P + + + + D+++ +SY+
Sbjct: 61 RLLGEAMQETIDGAMNKHFEDSGDRPALQPEVKMT-------NEDWKEGDDVEVAMSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I D+ + + + + D+ ID + +A+ F+ + +++ GD+V +D+
Sbjct: 114 LPAIPEVDMSDIALEKLVVKADDAAIDEALGNLAETAQDFKARRKGSKAKDGDQVVMDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E S ++ ++GS E LVG+K ++K++ FPE++ + LAGK
Sbjct: 174 GKVDGEAFEGGSAEDYPLVLGSNSFIPGFEEQLVGVKAEEEKDVTVTFPEEYGAEHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +IKEV P+ ++++LA + G E +A++ +++++ R +KR +L
Sbjct: 234 EAVFTCTIKEVKEPVAAEIDDELAKKFGAEDLAALKSQIAERLEAEYAGASRAVMKRGLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + K +FD+P SLV+ E I ++ E N + + + + E + + LA+RRV
Sbjct: 294 DALDAKVSFDLPPSLVDAEAKQIAHQLWHE---ENPEVHDHNHGEIEATEEHTKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K +EVT+ EM A+ Q ++PG E++ + QK P +LRAPIFE
Sbjct: 351 RLGLLLAELGQKAEVEVTDAEMTQAILGQARQYPGQERQFFEFVQKNPQMQQQLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+DHI+ ++ +++++ D L E
Sbjct: 411 DKVVDHIVAQAKVTEKEISKDDLQKALEALDAE 443
>gi|221068425|ref|ZP_03544530.1| trigger factor [Comamonas testosteroni KF-1]
gi|220713448|gb|EED68816.1| trigger factor [Comamonas testosteroni KF-1]
Length = 436
Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats.
Identities = 109/449 (24%), Positives = 218/449 (48%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + + R++ + + GFRPGKVP+S + YG
Sbjct: 1 MAVNVETLEKLERKITLSVPLSAIQSEVDARLKKVARTVKMDGFRPGKVPMSVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E +++ D R A +P IT EG ++ + + +++
Sbjct: 61 SVQYEVLNDKVGEAFAAAVNEADLRVAGQPKITEKEGAAE---------GEAQFEAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE--TESEIGDKVTVDYT 178
+P+++I +V + VD+ ID+ + + K F + + GD+VTVD+
Sbjct: 112 MPEVKIGDLTAAEVEKLTTSVDDAAIDKTVDILRKQRRTFTERAAGEAAVDGDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D ++ QF+VG + E + G+K G+ K FP D+ D+AGK
Sbjct: 172 GKIDGETFSGGKAEDFQFLVGEGQMLKEFEDATRGMKAGESKTFPLAFPADYHGADVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K+V +P VN + LG E S A+R + +++ +F V+ + K+
Sbjct: 232 TADFLVTVKKVEAPNLPEVNEEFVKTLGVEGGSVEALRDDIKKNLEREVKFRVQGRNKQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + + D+P++ V+ E +L+ R E+ K E + A+R
Sbjct: 292 VMDALVSVSELDLPKASVQAEVGRLLEGARAELEQRGIKDAAKA---EIPEDIFLPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + + NN++ T E++++ + + + + ++ + N LAE+ A +
Sbjct: 349 RVRLGLVVAELVKSNNLQATAEQIKAHVEELASSY-EKPEDVVRWYFGDRNRLAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V D +L ++ D+ V+FD+L +
Sbjct: 408 IENNVTDFVLGKAKVTDKAVSFDELMGQA 436
>gi|146292589|ref|YP_001183013.1| trigger factor [Shewanella putrefaciens CN-32]
gi|166229937|sp|A4Y5I1|TIG_SHEPC RecName: Full=Trigger factor; Short=TF
gi|145564279|gb|ABP75214.1| trigger factor [Shewanella putrefaciens CN-32]
Length = 434
Score = 253 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 208/448 (46%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + ++ +A I GFRPGKVP++ I YG
Sbjct: 1 MQVSVEATQGLERRLTISVPAEQIEKLVKDSLQREAKRARIPGFRPGKVPVTVINKRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + E+++ E + A P+ + + +++I
Sbjct: 61 AIRQDITGEVMQRNFIEAIIAEKLNPAGAPTFIPGST----------DSEKFEFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V Q V + ++D + + K + + E E+ GDKV +++ S
Sbjct: 111 YPEVELKGLDAIEVEQPKASVTDADVDSMIETLRKQHATYAAVEREAADGDKVKMNFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E ++ + +GS + ++G K G++ I+ FPE++ ++L GK
Sbjct: 171 VDGEEFEGGKAEDFELQLGSGRMIPGFEAGILGHKAGEEFVIDVNFPEEYHAENLKGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ + + + E ++ VK Q++
Sbjct: 231 KFAITLTEVQAANLPEVNDEFAALFGINEGGLEALKTEIRKNMNRELEQALKANVKEQVI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++P++L++ E N + Q+ ++ E + + A RRV
Sbjct: 291 AGLLANNDIELPKALIDGEVNVLRQQAMQRFGGQ------TANMPELPAELFTEQAARRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E +Q + + +++ ++ + +R E
Sbjct: 345 KIGLLLGEVIKTNELKAEDERVQGLIASMASAY-EDPSEVIAYYNSNKELMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LKS ++ +++V F++ + ++
Sbjct: 404 EQAVEALLKSAKVTEKEVAFEEFMNKAT 431
>gi|171059226|ref|YP_001791575.1| trigger factor [Leptothrix cholodnii SP-6]
gi|238689117|sp|B1Y6H4|TIG_LEPCP RecName: Full=Trigger factor; Short=TF
gi|170776671|gb|ACB34810.1| trigger factor [Leptothrix cholodnii SP-6]
Length = 435
Score = 253 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 96/447 (21%), Positives = 203/447 (45%), Gaps = 17/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + L+R + + + ++ L + R++ + GFRPGKVP+S + YG
Sbjct: 1 MAVTVETLDKLERRITLTLSADELKNEVESRLKKLARTTKADGFRPGKVPMSVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + + + R A P IT +G +D + ++++
Sbjct: 61 SVQYEVMNDKVGQAFAAATGEAQLRVAGTPRITEKDGSAD---------GQVSFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
P++ I L+V + EV + IDR + + K F + GD+VT+D+
Sbjct: 112 YPEVTIGDLSALEVERVTTEVTDVAIDRTLDILRKQRRTFADRPQGEYAVDGDRVTIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + + QFI+G + + + G+KTG+ K FP D+ D+AGK
Sbjct: 172 GKIDGETFQGGKAEAFQFILGEGRMLEAFEKAVRGMKTGESKTFPLAFPADYHGADVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ + + V+ A LG + +R + +++ +F V + K+
Sbjct: 232 EADFLVTLTRIEAQNLPEVDAAFAESLGIADATVDGLRADIKKNLEREVKFRVAARNKQS 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++ + TFD+P++LV+NE +++ R ++ + + + A+R
Sbjct: 292 VMSALEKVATFDLPKALVDNEMARLVENARADLKQRGIADADKA---PIPTEMFQPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+ + + N + T E++++ + + + ++++ + L+E+ A +
Sbjct: 349 RVRLGLTMAELVRANALSATMEQIKAHIDEMAQSY-EKPEEVVRWYFGDQQRLSEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFD 443
E V + +L Q+VD+++ FD+L
Sbjct: 408 IEANVANFVLGQAQVVDKQLPFDELMG 434
>gi|120599415|ref|YP_963989.1| trigger factor [Shewanella sp. W3-18-1]
gi|166229939|sp|A1RL90|TIG_SHESW RecName: Full=Trigger factor; Short=TF
gi|120559508|gb|ABM25435.1| trigger factor [Shewanella sp. W3-18-1]
gi|319425891|gb|ADV53965.1| trigger factor [Shewanella putrefaciens 200]
Length = 434
Score = 253 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 208/448 (46%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + ++ +A I GFRPGKVP++ I YG
Sbjct: 1 MQVSVEATQGLERRLTISVPAEQIEKLVKDSLQREAKRARIPGFRPGKVPVTVINKRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + E+++ E + A P+ + + +++I
Sbjct: 61 AIRQDITGEVMQRNFIEAIIAEKLNPAGAPTFIPGST----------DSEKFEFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D ++V Q V + ++D + + K + + E E+ GDKV +++ S
Sbjct: 111 YPEVELKGLDAIEVEQPKASVTDADVDSMIETLRKQHATYAAVEREAADGDKVKMNFVGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E ++ + +GS + ++G K G++ I+ FPE++ ++L GK
Sbjct: 171 VDGEEFEGGKAEDFELQLGSGRMIPGFEAGILGHKAGEEFVIDVNFPEEYHAENLKGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ + + + E ++ VK Q++
Sbjct: 231 KFAITLTEVQAANLPEVNDEFAALFGISEGGLEALKTEIRKNMNRELEQALKANVKEQVI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++P++L++ E N + Q+ ++ E + + A RRV
Sbjct: 291 AGLLANNDIELPKALIDGEVNVLRQQAMQRFGGQ------TANMPELPAELFTEQAARRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ +E +Q + + +++ ++ + +R E
Sbjct: 345 KIGLLLGEVIKTNELKAEDERVQGLIASMASAY-EDPSEVIAYYNSNKELMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LKS ++ +++V F++ + ++
Sbjct: 404 EQAVEALLKSAKVTEKEVAFEEFMNKAT 431
>gi|89073229|ref|ZP_01159759.1| trigger factor [Photobacterium sp. SKA34]
gi|89050939|gb|EAR56403.1| trigger factor [Photobacterium sp. SKA34]
Length = 432
Score = 253 bits (644), Expect = 7e-65, Method: Composition-based stats.
Identities = 87/448 (19%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL+R+L + +P+ + D+ ++ I GFRPGK P+ + ++G
Sbjct: 1 MQVTVETTEGLERQLTITVPAANIEDAVTAELKKIAKTRRFDGFRPGKAPMKMVAKMFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E++ E + K A P+ T + + DL + ++++
Sbjct: 61 SVRQDILGEVMHRHFIEAIVKEKINPAGAPTFTPVD---------VAEGNDLVFKATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I + D + V + + EV E ++D + + K + + ++ +VT+D+ +
Sbjct: 112 FPEIALQGLDKVVVEKPLIEVTEADVDTMLDTLRKQQATWTEVDAAADANSQVTIDFVGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + E +VG K G++ +E FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKAEGFALAMGQGRMIPGFEEGVVGKKAGEEFTVEVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +V + + + + G E ++ + +++ + V+ ++K Q+L
Sbjct: 232 TFAIKLHKVEAQELPELTEEFVAKFGVEDGSVDGLKAEVRKNMERELKQAVKGRIKDQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + VP +L++ E + Q+ + ++ E + + AKRRV
Sbjct: 292 NGLVEQNDITVPAALIDQEIETLRQQAAQRFGG------DTKNMPELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++G + + ++ EE +++ + + + +++ +++ + +R E
Sbjct: 346 VVGLLVGEVIKAEELKADEERVKAIIAEMASAY-EDPSEVVKYYETNEQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ID +L Q+ D+ V+F++L + ++
Sbjct: 405 EQAIDALLAKAQVSDKDVSFNELMNPAA 432
>gi|87201071|ref|YP_498328.1| trigger factor [Novosphingobium aromaticivorans DSM 12444]
gi|119370915|sp|Q2G3S9|TIG_NOVAD RecName: Full=Trigger factor; Short=TF
gi|87136752|gb|ABD27494.1| trigger factor [Novosphingobium aromaticivorans DSM 12444]
Length = 513
Score = 252 bits (643), Expect = 7e-65, Method: Composition-based stats.
Identities = 131/444 (29%), Positives = 245/444 (55%), Gaps = 12/444 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ++E +EGLKR V IP+ + I+ I + + GFRPGKVP + ++ ++G
Sbjct: 1 MQIVETTNEGLKRAYTVTIPAADIAARVEGEIKKIAPQVRMPGFRPGKVPANLVRKMHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + I+E + ++++ R AM+P++++ EG + D +L + ++
Sbjct: 61 ALHQEALQTTIREAMDKLVADNKLRPAMQPAVSLGEG--------YDEGKDAELTVELEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LPQIE S D L++ + + V E E+D +A I + +F + +++ GD++ +D+
Sbjct: 113 LPQIEAPSLDGLKLEKLVVPVTEAEVDEAVARIGQGQKSFTDAKKGAKAKDGDQIIIDFL 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E + ++ +G+ E LVG+K GD+K I FPED+ ++L GK
Sbjct: 173 GKVDGVAFEGGAAEDTPLELGAGRFIPGFEEQLVGVKVGDEKTITVTFPEDYPAENLKGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K V + N++ A LG ES ++ L +++Q + L R ++KR +L
Sbjct: 233 EATFDITVKAVKNAGEFEANDEFAKMLGLESLEQLKTLLRGQLEQETAGLTRTQMKRALL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + F VP S+VE E+ I +++ E + + I E + Y +A+RRV
Sbjct: 293 DQLAAGHDFAVPPSMVEAEFEQIWAQLQQEAQREENPEEALKEI-EAEKDDYRKIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK-MLDHFQKYPNALAELRAPIF 417
G++L IG+ N ++VT +EM+ + Q ++ +++ +D+ + P A A+LRAP++
Sbjct: 352 RLGLLLSEIGQANGVQVTSQEMEMLIRQAAQQYREQDRQRFVDYVRSEPLAAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVTFDQL 441
EDKV+D + ++ +R+VT ++L
Sbjct: 412 EDKVVDFLFDKAEVTEREVTREEL 435
>gi|325293050|ref|YP_004278914.1| trigger factor [Agrobacterium sp. H13-3]
gi|325060903|gb|ADY64594.1| trigger factor [Agrobacterium sp. H13-3]
Length = 492
Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 180/471 (38%), Positives = 295/471 (62%), Gaps = 1/471 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKREL V+IP+ + +ER+ D + K I GFRPGKVP+ H+K +YGK
Sbjct: 1 MQVIETLAEGLKRELKVVIPAADMKARLDERLVDAKDKVRINGFRPGKVPMGHLKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI+++ ++E+++E EILS R E++A +P+I++ E E + + D + ++Y+I
Sbjct: 61 SIMADLVNELVREKPSEILSSRGEKSATQPAISMTEDEQEAEKI-LSAETDFEFTVAYEI 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P IE+ + D ++VT+++ EV E EI+ Q+ +IA++ FE K+ ++ GD+VT++Y
Sbjct: 120 IPAIELKANDGIKVTREVVEVSEDEINEQILKIAESARTFEAKKGKAAEGDRVTMNYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + + ++ + ++GS + LVG+K GD+K I FP D+ +LAGK+
Sbjct: 180 VDGEAFDGGAAEDAELVLGSGRFIPGFEDQLVGVKAGDEKTITVTFPADYPAANLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ ++KEV + V +N++LA +LG ES ++ + +I+ + RQKVKRQILD
Sbjct: 240 NFDITVKEVAAAAAVEINDELAEKLGLESAEKLKEIVRGQIESQYGNVTRQKVKRQILDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y FD P LV+ E++ I +++ +++ + + + D+ +EE + Y LA+RRV
Sbjct: 300 LDEMYKFDTPAGLVDAEFDNIWRQINTDLAQSGKTFADEDTTEEEAREEYRKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGEK +EVTEEEMQ AL+QQL +FPG +K++LD F+ P A A LRAPIFE+K
Sbjct: 360 GLVLSEIGEKAGVEVTEEEMQRALFQQLQQFPGQQKEILDFFRNTPGASASLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
VID +L + + D+ V+ ++L + E + E +K + + +E
Sbjct: 420 VIDKLLTEISVTDKTVSKEELLADDGEEATETKKKAPAKKKAAAKADDAAE 470
>gi|67461716|sp|Q65RF4|TIG_MANSM RecName: Full=Trigger factor; Short=TF
Length = 431
Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 80/445 (17%), Positives = 209/445 (46%), Gaps = 18/445 (4%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ ++GL+R + + +P+ +T + + ++ + A + GFR GKVP I+ +G S+
Sbjct: 3 TIETTQGLERRVSITVPAETVTTAVRDELKRVAKNARVDGFRKGKVPAQIIEKRFGASVR 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+ +++++ ++ K A RP+ + E DL+ ++++ P+
Sbjct: 63 QDVLNDLLPRHFFDLAFKEKVNLAGRPTFAVE---------NYEEGKDLQFTATFEVYPE 113
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
I++ ++++V + + E+ + ++D + + K + + + D+VT+D+ S+D
Sbjct: 114 IQLQGLENIKVEKPVVEITDADVDNMVEVLRKQQATWAETDNAATKDDRVTIDFVGSIDG 173
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
+ + +G + + ++G K G+Q +IE FPED+ +++L K +
Sbjct: 174 EEFQGGKANDFVLAMGQGRMIPGFEDGILGHKAGEQFDIEVTFPEDYHVENLKAKPAKFA 233
Query: 244 FSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++K+V + + D + ++ +R + +++ + + +VK Q++D +
Sbjct: 234 ITVKKVEVMVLPELTADFIAKFGPNTKTVDDLRAEIRKNMQRELKNALTARVKNQVIDGL 293
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ DVP + V+ E + + +++ + + + AKRRV G
Sbjct: 294 IEQNQIDVPFAAVDQEIEVLRNQAAQRFGGNGEQAAQL------PRELFEEQAKRRVQVG 347
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++L + N ++ EE+ ++ + + ++++++ K + +R + E++
Sbjct: 348 LLLAEVISSNELKADEEKAKAMIEDIASAY-EQPAEVVEYYSKNNELMNNIRNVVLEEQA 406
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSS 446
ID +L Q+ ++ +FD++ + +
Sbjct: 407 IDAVLAKAQVTEKASSFDEVMNPQA 431
>gi|332529295|ref|ZP_08405257.1| trigger factor [Hylemonella gracilis ATCC 19624]
gi|332041212|gb|EGI77576.1| trigger factor [Hylemonella gracilis ATCC 19624]
Length = 437
Score = 252 bits (643), Expect = 8e-65, Method: Composition-based stats.
Identities = 91/449 (20%), Positives = 208/449 (46%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + + R++ + + GFRPGK P+S + YG
Sbjct: 1 MAVTVETLEKLERKITLNLPVDVIKTEVDARLKKLARTVRMDGFRPGKAPMSVVAQRYGF 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E ++ R A +P IT + + + +++
Sbjct: 61 SVQYEVMNDKVGEAFASAANEAKLRVAGQPRITEKDNAPE---------GQVSFDAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTVDYT 178
P+++I ++ + EV E I + + + K F + + ++ GD+V+VD+
Sbjct: 112 YPEVKIGELSGAEIEKVNAEVSEAAIQKTVDILRKQRRTFAQRGKDEAAQDGDRVSVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + QF+VG + E + + G+K G+ K FP D+ +D+AGK
Sbjct: 172 GKIDGEPFQGGKADGFQFLVGEGQMLKEFEDAVRGMKAGESKTFPLAFPADYHGQDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K++ + V++ LA LG + +A+ + +++ + + + K+
Sbjct: 232 TADFLVTVKKIEAAHLPEVDDALAKSLGVAEGTVAALHADIRKNLEREVKARLVARNKQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + K D+P+S+V E + +++ R ++ + K + + + A+R
Sbjct: 292 VMDTLIAKAELDLPKSIVAAELDRMVESARADLKARGIKDADKA---PIPTELFTPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + N +E T E++++ + + + + + + +AE+ A +
Sbjct: 349 RVRLGLVVAELVRANKLEATPEQIKAHVDELAASY-ERPEDVKRWYFSDNRRMAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V + +L ++ ++ ++FD L
Sbjct: 408 IENNVTEFVLSKAKVTEKAISFDDLMGQP 436
>gi|269102128|ref|ZP_06154825.1| cell division trigger factor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162026|gb|EEZ40522.1| cell division trigger factor [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 432
Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL+R+L + +P+ + D+ ++ I GFRPGK PL + ++G
Sbjct: 1 MQVTVETTEGLERQLTITVPAANIEDAVTAELKKIAKNRRFDGFRPGKAPLKMVAKMFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E+++ E + K A P+ T E DL + ++++
Sbjct: 61 SVRQDILGEVMQRHFIEAIVKEQINPAGAPTFTPVEMA---------EGQDLVFKATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I + D + V + + EV E ++D + + K + + + +VT+D+ +
Sbjct: 112 FPEIALQGLDKVVVEKPVVEVTEADVDNMIETLRKQQATWTEVDAPAVADSRVTIDFEGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + + +G + + +VG K G++ IE FPE++ ++L GK
Sbjct: 172 IDGEAFDGGKAEGFALAMGQGRMIPGFEDGIVGKKAGEEFNIEVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +V + + + + G E+ A++ + +++ + V+ ++K Q +
Sbjct: 232 VFAIKLSKVEAQELPELTEEFVAKFGIENGSVDALKAEVRKNMERELKQAVKGRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + VP +L++ E N + Q+ N ++ E + + AKRRV
Sbjct: 292 NGLIEQNDIAVPAALIDQEINVLRQQAAQRFGG------NAQNMPELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE +++ + + + +++ +++ + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADEERVKAIIAEMASAY-EDPTEVVAYYEGNEQLMNNMRNIALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ID I+ Q+ D++V F+ L + ++
Sbjct: 405 EQAIDAIVAKAQVSDKEVGFNDLMNPAA 432
>gi|331019228|gb|EGH99284.1| trigger factor [Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 422
Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 93/439 (21%), Positives = 207/439 (47%), Gaps = 19/439 (4%)
Query: 15 LDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEI 74
+ + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y E + ++I+
Sbjct: 1 MTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYEDGARQEALGDLIQAT 60
Query: 75 VPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQV 134
E + ++ A P++ E DL+ ++++ P+ ++ FD + V
Sbjct: 61 FYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEVFPEFTVAGFDTIAV 111
Query: 135 TQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNV 194
+ +V + ++D + + K NV FEV + ++ D++ +D+ VD + S
Sbjct: 112 ERLSADVADSDLDNMLEVLRKQNVRFEVADRAAQNEDQLNIDFEGKVDGEVFAGGSATAT 171
Query: 195 QFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLP 254
Q ++GS + + LVG K G+++ + FPED+ DLAGK ++ V P
Sbjct: 172 QLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLDLAGKAAEFTVTVNTVSEPKL 231
Query: 255 VVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPES 312
+N + + G + R + +++ ++ KVK Q++D + +VP++
Sbjct: 232 PELNEEFFKQFGIKETGIEGFRTEVRKNMERELRQAIKSKVKNQVMDGLLAANPIEVPKA 291
Query: 313 LVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNN 372
L+ENE N + + + D+ + + AKRRV G+++ + ++ +
Sbjct: 292 LLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRVELGLIVAEVVKQFD 344
Query: 373 IEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
++ + ++ + + + ++++ + K + E+R+ + E++V+D +L+ +
Sbjct: 345 LKPDDARVREMIQEMASAY-QEPEQVVAWYYKNEQQMNEVRSVVLEEQVVDTVLQKASVT 403
Query: 433 DRKVTFDQLFDNSSESSPE 451
D+ V++++ + +
Sbjct: 404 DKSVSYEEAVKPVEAAKAD 422
>gi|260773195|ref|ZP_05882111.1| cell division trigger factor [Vibrio metschnikovii CIP 69.14]
gi|260612334|gb|EEX37537.1| cell division trigger factor [Vibrio metschnikovii CIP 69.14]
Length = 433
Score = 252 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 89/449 (19%), Positives = 210/449 (46%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E DL ++++
Sbjct: 61 AVRQDMLGEVMQRHFIEAIVKEKINPAGAPTFAPVSM---------EEGQDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + ++ + + K + + +E G +V++D+ S
Sbjct: 112 YPEVELKGLENITVEKPAAEVTDADVAEMLETLRKQQATWVEVDEAAEEGKRVSIDFIGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + EI+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIAGKTKGMEFEIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G ++ + +++ + ++ +VK Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVAKFGVADGGLEGLKAEVRKNMERELKQAIKARVKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + VP +LV+ E N + Q+ N ++ ++ + + AKRRV
Sbjct: 292 EGLVKENELLVPSALVDQEINVLRQQAAQRFGG------NTEAANQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + ++ EE++++ + + + +++ ++Q+ + +R E
Sbjct: 346 VVGLLLGEVIRTQELKADEEKVKAIIEEMATAY-EDPSEVIAYYQQNEQMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ ID I+ Q+ ++ V+F++L + +
Sbjct: 405 EQAIDAIIAKAQVTEKTVSFNELMNPEAA 433
>gi|114563763|ref|YP_751276.1| trigger factor [Shewanella frigidimarina NCIMB 400]
gi|122299287|sp|Q07ZX7|TIG_SHEFN RecName: Full=Trigger factor; Short=TF
gi|114335056|gb|ABI72438.1| trigger factor [Shewanella frigidimarina NCIMB 400]
Length = 434
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 96/448 (21%), Positives = 205/448 (45%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ + + +A + GFRPGKVP+ I YGK
Sbjct: 1 MQVSVETTQGLERRLTISVPAEQIEKLVKDNVLREAKRARLPGFRPGKVPIGEINKRYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + E+++ E + A P T + +++I
Sbjct: 61 AIRQDITGEVMQRNFIEAIVAEKLNPAGAPVFTPGST----------EGDSFEFVATFEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ ++ D + V Q EV++ ++D + + K + F E + DKV +++ S
Sbjct: 111 YPEVVLTGLDSIAVEQPKAEVNDADVDVMIETLRKQHATFAPVERAAVADDKVKMNFIGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + +GS + +VG KTGD+ EIE FPED+ ++L GK
Sbjct: 171 IDGEEFEGGKADDFELQLGSNRMIPGFETGIVGHKTGDEFEIEVTFPEDYHAENLKGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ EV + VN++ A G A++ + + + E ++ VK Q++
Sbjct: 231 KFVITLTEVQAANLPEVNDEFASLFGIAEGGLDALKAEIRKNMTRELEQALKANVKEQVI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ +P++LVE E N + Q+ +++ E + + A+RRV
Sbjct: 291 TGLLAANDIAIPKALVEGEVNVLRQQAMQRFGGQ------TENMPELPAELFTEQAERRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++ ++ + + + + +++ ++ + +R E
Sbjct: 345 KIGLLLGEVIKTNELKAEDDRVNTLIESMASAY-EDPSEVVSYYNSNKELMQNMRNVALE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +LKS ++ + V F++ + ++
Sbjct: 404 EQAVEALLKSSKVTVKDVAFEEFMNKAT 431
>gi|239995516|ref|ZP_04716040.1| trigger factor [Alteromonas macleodii ATCC 27126]
Length = 434
Score = 251 bits (641), Expect = 1e-64, Method: Composition-based stats.
Identities = 88/448 (19%), Positives = 220/448 (49%), Gaps = 16/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P++ + + R++ + I GFRPGKVP++ IK +G+
Sbjct: 1 MQVSVETTQGLERRLTITVPADTVDSAVKSRLQQLAKTQRINGFRPGKVPVNVIKKRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E +++++ + + + + A P + + E DL+ S+++
Sbjct: 61 AVRQEVAGDVMQQNFYQAVIQEKIQPAGMPKFELTK---------DEDGQDLEFTASFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D+++ + + E+ ++++D M + K + ++ + +++ DKV +D+ S
Sbjct: 112 YPEVEVKGVSDIEIEKPVVEITDEDLDNMMETLQKQHATWKEVKRKAKKDDKVIIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ +G + + LVG K G++ IE FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAEDFALELGKDRMIPGFEKPLVGAKAGEEVTIEVTFPEDYHAENLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K+V V+ + A G E A++ + +++ ++ +VK ++
Sbjct: 232 VFQTTVKKVEGLNLPKVDEEFAKLFGVEEGGVDALKAEVRKNMQRELNQTLKAQVKEDVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ D+P++L++ E N + ++ + S ++ + + + AKRRV
Sbjct: 292 AKLVEANEIDIPQALIDQEVNALREQAKQRFSQQG----GGQNLPDLPAELFTDNAKRRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + ++N ++ E ++ + + ++++D++ + +++ E
Sbjct: 348 SIGLLLGEVIKQNELKADEAKVNEMI-ETAASAYEDPQEVVDYYNNNQELMQQMQNVALE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ I+ +L+ ++ + FD++ + +
Sbjct: 407 EQAIEWVLEQAKVTEVTKAFDEVMNKQA 434
>gi|187477998|ref|YP_786022.1| trigger factor [Bordetella avium 197N]
gi|119370882|sp|Q2L258|TIG_BORA1 RecName: Full=Trigger factor; Short=TF
gi|115422584|emb|CAJ49109.1| trigger factor [Bordetella avium 197N]
Length = 436
Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats.
Identities = 100/446 (22%), Positives = 209/446 (46%), Gaps = 15/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + GL+R +D+ I + +++ + A + GFRPGK P++ ++ +G
Sbjct: 1 MQPVVETLSGLERRVDLAISVADVEKEVQAQLKRVARTAKVPGFRPGKAPMAMLERSHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + I+ + + + R A PS+ D L ++++
Sbjct: 61 SVRYDVINSQVARAFEQAVEAAQLRVAGSPSLEPKTEGVDEN--------TLAFSATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYTV 179
P++ + DL VT+ EV + E+D+ + + K ++E +E ++ D++ +D+
Sbjct: 113 YPEVAVPDLSDLAVTRYETEVTDAEVDKTLDVLRKQRASYETREGRAAQDDDRIVLDFAG 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D V E +N FI+G + E E GLK GD K FPED+ K++AGK
Sbjct: 173 TIDGVPFEGGKAENFPFILGQGRMLPEFEEAARGLKAGDTKVFPLSFPEDYQGKEVAGKT 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KEV + VV+ + A ++ I++ + + + K +
Sbjct: 233 AEFTITVKEVAEAVLPVVDAEFAKSLGQADADVEKLKADIRGNIEREVKVRSQGRTKTSV 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D + FDVP+SLV+N+ G + + R E+ + + + + + ++RR
Sbjct: 293 MDALVEAAKFDVPKSLVDNDVQGRIAQAREELKQRGVPNADSM---PMPAEVFAVESERR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+++ + ++ ++ E++++ + + + +++ ++ AE+ A +
Sbjct: 350 VRLGLLVSELVKQQQLQAKPEQVRARIEEFAQNY-EQPAQVVSYYLSDRQRRAEIEAIVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFD 443
ED V+ ++L+ ++ D KV FDQL
Sbjct: 409 EDNVVAYVLEKAKVTDEKVPFDQLMG 434
>gi|323495057|ref|ZP_08100146.1| trigger factor [Vibrio brasiliensis LMG 20546]
gi|323310714|gb|EGA63889.1| trigger factor [Vibrio brasiliensis LMG 20546]
Length = 434
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 91/450 (20%), Positives = 214/450 (47%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVPL + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ EG + DL ++++
Sbjct: 61 AVRQDVMGEVMQRHFIEAIVKEKINPAGAPTFAPVEG---------KEGEDLVFNATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + +++ + + K + E +E G + T+D+ S
Sbjct: 112 YPEVELKGLENITVEKPTTEVQDADVEEMIDTLRKQQATWAEVEEAAEEGKRATIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + EI+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIAGKTAGMEFEIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + +++ + V+ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVSKFGVAEGGVEALKAEVRKNMQRELKQAVKNRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E + Q+ + +Q + + + AKRRV
Sbjct: 292 DGLVKENEIDVPSALIDQEIGTLRQQAAQRFGGNPEAAQQL------PRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ +E++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADDEKVKALIEEMATAY-EDPAEVVSYYEQNEQMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ID I+ Q+ +++V+F++L + +
Sbjct: 405 EQAIDAIIAKAQVTEKEVSFNELMNQQPAA 434
>gi|254507780|ref|ZP_05119911.1| trigger factor [Vibrio parahaemolyticus 16]
gi|219549305|gb|EED26299.1| trigger factor [Vibrio parahaemolyticus 16]
Length = 434
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 90/450 (20%), Positives = 214/450 (47%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVPL + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E + DL ++++
Sbjct: 61 AVRQDVMGEVMQRHFIEAIVKEKINPAGAPTFAPVEN---------KEGADLVFNATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV++ +++ + + K + E +E G + T+D+ S
Sbjct: 112 YPEVELKGLENITVEKPTTEVNDADVEEMIETLRKQQAGWVEVEEAAEEGKRATIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + EI+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIAGKTAGMEFEIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + +++ + V+ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVSKFGVAEGGVDALKAEVRKNMERELKQAVKNRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E + Q+ N ++ + + + AKRRV
Sbjct: 292 DGLVKENEIDVPAALIDQEIGTLRQQAAQRFGG------NPEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ +E++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADDEKVKALIEEMATAY-EDPAEVVAYYEQNEQMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ID I+ Q+ +++V+F++L + +
Sbjct: 405 EQAIDAIIAKAQVTEKEVSFNELMNQQPAA 434
>gi|332141946|ref|YP_004427684.1| trigger factor [Alteromonas macleodii str. 'Deep ecotype']
gi|327551968|gb|AEA98686.1| trigger factor [Alteromonas macleodii str. 'Deep ecotype']
Length = 434
Score = 251 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 90/448 (20%), Positives = 222/448 (49%), Gaps = 16/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +PS+ + + R++ + I GFRPGKVP+S IK +G+
Sbjct: 1 MQVSVETTQGLERRLTITVPSDTVDSAVKSRLQQLAKTQRINGFRPGKVPVSVIKKRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E +++++ + + + + A P + + E DL+ S+++
Sbjct: 61 AVRQEVAGDVMQQNFYQAVIQEKIQPAGMPKFELTK---------DEDGQDLEFTASFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D+++ + + E+ ++++D M + K + ++ + +++ DKV +D+ S
Sbjct: 112 YPEVEVKGVSDIEIEKPVVEITDEDLDNMMETLQKQHATWKEVKRKAKKDDKVIIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ +G + + LVG K G++ IE FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAEDFALELGKDRMIPGFEKPLVGAKAGEEVTIEVTFPEDYHAENLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K+V V+ + A G E A++ + +++ + ++ +VK ++
Sbjct: 232 VFQATVKKVEGLDLPKVDEEFAKLFGVEEGGVDALKAEVRKNMQRELDQTLKAQVKEDVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + D+P++L++ E N + ++ + S ++ + + + AKRRV
Sbjct: 292 SKLVDANEIDIPQALIDQEVNALREQAKQRFSQQG----GGQNLPDLPAELFTDNAKRRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + ++N ++ E ++ + + ++++D++ + +++ E
Sbjct: 348 SIGLLLGEVIKENELKADEAKVNEMI-ETAASAYEDPQEVVDYYNNNQELMQQMQNVALE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ I+ +L+ ++ + FD++ + +
Sbjct: 407 EQAIEWVLEQAKVTEVTKAFDEVMNKQA 434
>gi|124266484|ref|YP_001020488.1| trigger factor [Methylibium petroleiphilum PM1]
gi|166229900|sp|A2SFB4|TIG_METPP RecName: Full=Trigger factor; Short=TF
gi|124259259|gb|ABM94253.1| putative peptidyl-prolyl cis/trans isomerase (trigger factor)
protein [Methylibium petroleiphilum PM1]
Length = 434
Score = 251 bits (639), Expect = 3e-64, Method: Composition-based stats.
Identities = 93/446 (20%), Positives = 208/446 (46%), Gaps = 17/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R + +I+ ++ + + R++ + GFRPGKVP+S + YG
Sbjct: 1 MAVTVETLEKLERRITLILSADTIKNEVEMRLKRLAKTVKADGFRPGKVPMSVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E + ++ R A P I+ EG + +L ++++
Sbjct: 61 SVQYEVMNDKVGEAFSKAANEAQLRVAGAPRISEKEGAPE---------GELAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
P ++I ++ + EV + ID+ + + K F + GD+VT+D+
Sbjct: 112 YPDVKIGDLSATEIDRVSTEVTDAAIDKTLDILRKQRRTFAQRAASEGAVDGDRVTIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D V + + QFI+G + + + G+KTG+ K FP+D+ K++AGK
Sbjct: 172 GKIDGVPFDGGKAEGFQFILGEGRMLEAFEKAVRGMKTGESKTFPLQFPDDYQGKEVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ ++ + V+ A LG + +R + +++ + + + K
Sbjct: 232 EADFLVTLTKIEAQHLPEVDEAFAQSLGIQDPTLEGLRADIRKNLEREVKNRLIARNKSA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+++ + D+P++LV+NE + +++ R ++ K + + +H A+R
Sbjct: 292 VMEALIKVADLDLPKALVQNETDRMIEGARADLKQRGIKDADKA---PIPAEIFHEQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + N ++ E++ + + + + +++ + LAE+ A +
Sbjct: 349 RVRLGLVVAELVRTNQLQAKGEQIGAHIEEMALSY-EKPEEVRRWYFGDRQRLAEVEALV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLF 442
E+ V + +L ++ D+++ FD+L
Sbjct: 408 VENNVTEFVLSKAKVSDKQLPFDELM 433
>gi|315499700|ref|YP_004088503.1| trigger factor [Asticcacaulis excentricus CB 48]
gi|315417712|gb|ADU14352.1| trigger factor [Asticcacaulis excentricus CB 48]
Length = 446
Score = 251 bits (639), Expect = 3e-64, Method: Composition-based stats.
Identities = 135/450 (30%), Positives = 250/450 (55%), Gaps = 7/450 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV+EK +EGL R +V + + L + +I+DI K IKGFRPGKVP +H++ LYGK
Sbjct: 1 MQVVEKLNEGLSRVYEVTVAKDILAAKLDAKIKDIAPKMQIKGFRPGKVPAAHVRKLYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++SE + E + E L + R A +P + +I+G DL +S +
Sbjct: 61 ELMSEVLQEQLNETSQATLEQHKVRPASQPELNP----IGDIDAVIKGEADLAYEISVEQ 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK---ETESEIGDKVTVDY 177
+P+ E L++ + + E E+E++ Q+ I K ++E K ++ GDK+ +D+
Sbjct: 117 MPEFEPVDPSTLELKRPVYEPTEEEVNEQLENILKQTKSYESKGGKAPKAADGDKLKIDF 176
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D + E S + + ++GS E L+G K G+++ + FP D+ +LAG
Sbjct: 177 VGKIDGEVFEGGSMEGAELVIGSGQFIPGFEEQLIGAKKGEERVLNVTFPADYGAANLAG 236
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K ++ E+ +P V +++ A LG E A++ L +++Q R K+KR +
Sbjct: 237 KAATFETTVHEISAPKDAVADDEWAKGLGLEGLDALKDLLKGQLQQQYAQAARFKMKRAL 296
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + K++F++P+ +++ E+ GI Q+V + ++ ++ ++E Y +A+RR
Sbjct: 297 LDILDEKHSFELPKKMLDAEFAGIWQQVEQDKAAGQLSEEDAAKSEDELKGEYMKIAERR 356
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL IG KNN++V+E+E+ A+ ++ FPG E+++ + +++ P A A++RAPI+
Sbjct: 357 VRLGLVLAEIGTKNNVQVSEQEVAQAIAREARNFPGQERQVFEFYRQNPAAAAQIRAPIY 416
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
E+KV+DHI ++ + ++ + L + +
Sbjct: 417 EEKVVDHIFAIAKVSEEPISKEDLLADEED 446
>gi|209694397|ref|YP_002262325.1| trigger factor [Aliivibrio salmonicida LFI1238]
gi|226738670|sp|B6EHK2|TIG_ALISL RecName: Full=Trigger factor; Short=TF
gi|208008348|emb|CAQ78502.1| trigger factor (TF) [Aliivibrio salmonicida LFI1238]
Length = 432
Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 92/448 (20%), Positives = 203/448 (45%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L + +P+ + D+ N + +I GFR GKVP+ + +YG
Sbjct: 1 MQVTVETKEGLERVLTITVPAANIEDAVNAELRNIAKNRRFDGFRKGKVPMKMVAKMYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E DL +++I
Sbjct: 61 AVRHDKMGEVMQRHFIEAIVKDKINPAGAPTFAPVE---------FAEGQDLVFTATFEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + D + V + EV ++++ + + K + + +E G + T+++ S
Sbjct: 112 YPEVTLQGLDKVVVEKPQVEVKDEDVAEMLETLRKQQATWSDADVAAEDGTRATINFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E N +G + + + G K GD+ I FPED+ ++L GK
Sbjct: 172 IDGELFEGGKADNFPLEMGQGRMIPGFEDGIKGKKAGDELTINVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ +V + +N++ + G + ++ + +++ V+ K+K Q ++
Sbjct: 232 EFAITVVKVEARELPEMNDEFVTKFGAQGGVEGLKTEVRKNMERELAQTVKNKIKEQAIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + DVP +L++ E + Q+ N DS E + + AKRRV+
Sbjct: 292 GLVEQNNIDVPSALIDQEVQVLRQQAVQRFGG------NADSAPELPRELFEEQAKRRVV 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++LG + + ++ +E++++ + + + +++ +++ + +R E+
Sbjct: 346 VGLLLGEVIKTEELKADDEKVKALINEMASAY-EDPTEVVAYYEGNEQMMNNMRNVALEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ID IL Q+ ++ V F++L +
Sbjct: 405 QAIDAILAKAQVSEKAVGFNELMNQQPA 432
>gi|149186490|ref|ZP_01864802.1| trigger factor [Erythrobacter sp. SD-21]
gi|148829717|gb|EDL48156.1| trigger factor [Erythrobacter sp. SD-21]
Length = 521
Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats.
Identities = 127/452 (28%), Positives = 244/452 (53%), Gaps = 12/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ E ++GL+R + IP+ + + +I+ I + + GFRPGKVP + ++ ++G+
Sbjct: 1 MQIKETANDGLQRAYAITIPAKEIDARIDSQIKKIAPQVKMPGFRPGKVPANLVRKMHGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++E+I+E V + + + + AM+P + + EG E D +L + ++
Sbjct: 61 QLHAEAVNEMIRESVDKTMEENKLKPAMQPKVELGEG--------YEAGKDAELTIELEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYT 178
LP+IE S DD+ + + V + E+ + ++A+NN +++ + D++ +D+
Sbjct: 113 LPEIETPSTDDIAIERLTVPVSDDEVMDAIGKLAENNKSYKEAAKTKKAADGDQLIIDFV 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + ++GS E LVG+KTGD K IE FPED+ LAGK
Sbjct: 173 GRVDGTEFEGGKADDAALVLGSGMFIPGFEEQLVGVKTGDTKTIEVTFPEDYQATHLAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
K + ++K+V ++++ A G + ++ L +++Q + L R ++KR +L
Sbjct: 233 KAEFDVTVKQVKVEGDTKIDDEFAKNFGLDGLDKLKELLRGQLEQETAGLTRTQMKRSLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + F VP+ +V+ E++ I +++ E + + + + E + Y +A+RRV
Sbjct: 293 DQLAAGHDFAVPQGMVDAEFDQIWTQLQQEAARSENP-EEMLKEMEAEKDDYRSIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELRAPIF 417
G++L IG+ NN++VT +EM + Q ++ P ++ + + Q+ P A A+LRAP++
Sbjct: 352 RLGLLLSEIGQANNVQVTSQEMSMLIQQAAQQYRPEDRERFMQYIQQEPMAAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
EDKV+D + +I DR+VT ++L
Sbjct: 412 EDKVVDFLFDKAEITDREVTREELEAAIEADE 443
>gi|332532272|ref|ZP_08408153.1| cell division trigger factor [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038370|gb|EGI74815.1| cell division trigger factor [Pseudoalteromonas haloplanktis
ANT/505]
Length = 434
Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats.
Identities = 87/447 (19%), Positives = 208/447 (46%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R + + +PS + +R++ + I GFR GKVP+S I +G
Sbjct: 1 MQVSVETTQGLERRITITVPSENVETEVKKRLQQLSKTQRIDGFRAGKVPVSVINKRFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E E+++ E + A P+ +E DL+ ++++
Sbjct: 61 AVRQEVAGEVMQRNYIEAIVSEKINPAGAPTFAPKS---------LEAGKDLEFSATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D + V + V ++++ + + K + A+ + + D+VTVD+ +
Sbjct: 112 YPEVEVQGLDKITVEKPAVTVTDEDLANMLETLRKQHAAWADVDAAAGENDRVTVDFVGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E ++ +G + + +VG K G++ + FP+D+ ++L GK
Sbjct: 172 IDGEVFEGGKAEDFPLELGQGRMIPGFEDNIVGKKAGEEVVADVTFPDDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + ++ + A + G A++ + + + + V+ VK Q +
Sbjct: 232 QFTITVKKVEAQELPELSEEFATKFGVTEGGVDALKEEVKKNMTRELDQAVKASVKDQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ +VP++LV+ E + + Q+ + ++ E + +H A RV
Sbjct: 292 KGLLANNEIEVPKALVDQEVDALRQQAAQRFGG------DAQNMPELPAELFHEQAVTRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
TG++LG + + N+I+V + ++++ + + +++++++ + ++R E
Sbjct: 346 KTGLLLGEVIKANDIKVDDAKVEALIATVASAY-EDPTEVVEYYKGNDQLMQQMRNVAME 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ ++ IL + D + FD + +
Sbjct: 405 EQAVEAILAKAVVTDVEKAFDDIMNPQ 431
>gi|315122685|ref|YP_004063174.1| trigger factor [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313496087|gb|ADR52686.1| trigger factor [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 459
Score = 250 bits (637), Expect = 4e-64, Method: Composition-based stats.
Identities = 314/457 (68%), Positives = 390/457 (85%), Gaps = 1/457 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+IEKFSEGL RELDV+IPSN+LT+SFN+R+EDIRS A+IKGFRPGKVP SHIKS+YGK
Sbjct: 1 MQIIEKFSEGLNRELDVVIPSNQLTESFNKRLEDIRSTAHIKGFRPGKVPFSHIKSIYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTV-DLKLRLSYD 119
SILSE ID++IK+ VPE+LSKRDERAAMRP ITINEG+ T+ + DLKL LSYD
Sbjct: 61 SILSEIIDDLIKKTVPEVLSKRDERAAMRPKITINEGDEKETTSRLMDGSIDLKLGLSYD 120
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
ILP++EI+ FDDLQ+T+D+CE+D+KEID+ M++IA+ N+AFEVKE E+ IGD++TVDYT+
Sbjct: 121 ILPKVEINIFDDLQITRDVCEIDDKEIDKHMSDIAEKNIAFEVKEKEAAIGDRITVDYTL 180
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
SVD+V+L+D SK+N+QFIVGS +LF ETT LV LK G+ KEIER FPEDHSIKDLAGKK
Sbjct: 181 SVDDVVLKDHSKENIQFIVGSEELFPETTNTLVDLKAGEHKEIERVFPEDHSIKDLAGKK 240
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
V+LNFSIKEV SPLP +VN+DLA+RLGFESE+ MR S +IK+ SE VRQK+KRQ++D
Sbjct: 241 VKLNFSIKEVSSPLPAIVNDDLAIRLGFESEAIMRDFLSNQIKKQSEVAVRQKLKRQVID 300
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
Y++ KY FD+P+SL++NEYNGILQ++R EM+ + QN DSI EEDLQ Y +LA+RRV
Sbjct: 301 YLNEKYIFDIPQSLLDNEYNGILQQIRSEMNPSGNDMQNNDSIKEEDLQDYRLLAERRVR 360
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
GIVLGTIGEKN+IEVTEEE++SALYQQL RFPG EKKMLD+FQ PNA+AELRAPIFE+
Sbjct: 361 AGIVLGTIGEKNSIEVTEEEIKSALYQQLSRFPGQEKKMLDYFQNSPNAIAELRAPIFEE 420
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDK 456
KVID+ILK+ Q+VD+KVT +QLF S ESS +++ +
Sbjct: 421 KVIDYILKNAQVVDKKVTIEQLFSYSVESSQDEVSHE 457
>gi|312882508|ref|ZP_07742249.1| trigger factor [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369908|gb|EFP97419.1| trigger factor [Vibrio caribbenthicus ATCC BAA-2122]
Length = 434
Score = 250 bits (637), Expect = 5e-64, Method: Composition-based stats.
Identities = 91/450 (20%), Positives = 217/450 (48%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVPL + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E + DL ++++
Sbjct: 61 AVRQDVMGEVMQRHFIEAIVKEKINPAGAPTFAPVEN---------KEGEDLVFNATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + +++ V + EV + +++ + + K + + +E G + T+D+ S
Sbjct: 112 YPEVALKGLENITVEKPATEVQDADVEEMIETLRKQQANWAEVDEVAEDGKRATIDFIGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G K G++ EI+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGISGKKAGEEFEIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++ +V + VN+D + G A++ + +++ + V+ ++K Q +
Sbjct: 232 KFSITVNKVEARELPEVNDDFIAKFGVSEGGVDALKAEVRKNMERELKQAVKNRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +VP SL++ E + Q+ N ++ ++ + + AKRRV
Sbjct: 292 DGLVKENDIEVPASLIDQEIGTLRQQAAQRFGG------NPEAAEQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ +++++S + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADDDKVKSLIQEMATAY-EDPSEVIAYYEQNEQMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ID I+ Q+ +++V+F++L + +
Sbjct: 405 EQAIDAIISKAQVSEKEVSFNELMNQQPAA 434
>gi|323498275|ref|ZP_08103277.1| trigger factor [Vibrio sinaloensis DSM 21326]
gi|323316703|gb|EGA69712.1| trigger factor [Vibrio sinaloensis DSM 21326]
Length = 434
Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats.
Identities = 88/450 (19%), Positives = 215/450 (47%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVPL + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E + DL ++++
Sbjct: 61 AVRQDVMGEVMQRHFIEAIVKEKINPAGAPTFAPVEN---------KEGEDLVFNATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + +++ + + K ++ E +E G + T+D+ S
Sbjct: 112 YPEVELKGLENIAVEKPTTEVQDADVEEMIETLRKQQASWVEVEEAAEEGKRATIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + +I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIAGKTAGMEFDIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + +++ + ++ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVSKFGVAEGGVDALKAEVRKNMERELKQAIKNRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E + Q+ N ++ ++ + + AKRRV
Sbjct: 292 DGLVKENDIDVPAALIDQEIGTLRQQAAQRFGG------NPEAAEQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ +E++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADDEKVKALIEEMATAY-EDPSEVVSYYEQNEQMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ID I+ Q+ +++V+F++L + +
Sbjct: 405 EQAIDAIIAKAQVSEKEVSFNELMNQQPAA 434
>gi|254294163|ref|YP_003060186.1| trigger factor [Hirschia baltica ATCC 49814]
gi|254042694|gb|ACT59489.1| trigger factor [Hirschia baltica ATCC 49814]
Length = 446
Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats.
Identities = 132/439 (30%), Positives = 251/439 (57%), Gaps = 6/439 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V E SEGL RE V++ + L + +I +R + N+KGFRPGKVP++HI++ YGK
Sbjct: 1 MNVTETKSEGLTREYTVVVSKDSLAEKLEAKIAQLRPQMNLKGFRPGKVPVAHIRNTYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SIL + + E + + L ++ R A +P+I + + +++G DL+ + ++
Sbjct: 61 SILGDIVQEEVTATSQKTLEDKEIRPAAQPTIELTCDQ----EQMMDGKADLEYSMKVEL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
+P+ E + D+++ + + EV + E+D + ++A++N +E + ++ GD V +D++
Sbjct: 117 MPEFEPADVTDIELERLVVEVTDAEVDEALGKLAESNKQYEARGKTAKAREGDAVVIDFS 176
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + + + + ++G + L+G KTG + FPED+ ++LAGK
Sbjct: 177 GKIDGELFDGGTAEGQTIVLGEGRFIPGFEDQLIGAKTGQDVTVTVTFPEDYPAENLAGK 236
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + EV +P ++ + A LG E + ++ L S+ I+Q RQ++KR +L
Sbjct: 237 EAVFETKVNEVRAPKEATIDEEFAKGLGIEDLATLKDLISKNIEQELAGGSRQRLKRVLL 296
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + ++ FD+P +VE E++ I ++ E + ++ ++E Y +++RRV
Sbjct: 297 DALDERHDFDLPPGMVEAEFDQIWKQFEQEKEADRLDEEDKAKSEDELKAEYRKISERRV 356
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IG N +E+ +EE+ AL Q+ R+PG E+++++ + K P A+A+LRAP+FE
Sbjct: 357 RLGLVLAEIGRINKVEIKQEEVSRALNQEASRYPGQEQQVIEFYTKTPAAMAQLRAPLFE 416
Query: 419 DKVIDHILKSVQIVDRKVT 437
+KV+D+I++ ++ D+ VT
Sbjct: 417 EKVVDYIIERAKVTDKTVT 435
>gi|293606141|ref|ZP_06688506.1| trigger factor [Achromobacter piechaudii ATCC 43553]
gi|292815596|gb|EFF74712.1| trigger factor [Achromobacter piechaudii ATCC 43553]
Length = 436
Score = 249 bits (636), Expect = 5e-64, Method: Composition-based stats.
Identities = 95/446 (21%), Positives = 202/446 (45%), Gaps = 15/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + GL+R +D+ + + +++ + A + GFRPGK PL+ ++ +G
Sbjct: 1 MQPVVETLSGLERRVDLAVSVADVEKEVQAQLKRVARTAKVPGFRPGKAPLAMLERSHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + I+ + + + R A P++ L ++++
Sbjct: 61 SIRYDVINSQVGRAFEQAIDGAKLRVAGAPNLEPKTEGV--------TDDTLAFTATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYTV 179
P++ + L VT+ V + E+ + + + K FE +E S+ GD+VT+D+
Sbjct: 113 YPEVVVPDLSALAVTRYETAVTDAEVQQTLEVLRKQRATFEAREGRASQDGDRVTLDFAG 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D V E ++ F++G + E E GLK G+ K + FP+D+ ++AGK
Sbjct: 173 TIDGVPFEGGKAEDFPFVLGQGRMLPEFEEAARGLKAGETKVFQLKFPDDYQGVEVAGKT 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KEV + +N++ A ++ I++ + + K +
Sbjct: 233 AEFTITVKEVAEGVLPELNSEFAKSLGQAEGDVEKLKADIRSNIEREVKVRSAGRTKSSV 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D + FDVP++LV+N+ G + R E+ + + + ++RR
Sbjct: 293 MDALVEAGKFDVPKALVDNDVQGRVAAAREELKQRGIPNAESV---PIPAEAFSTESERR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+++ + ++ ++ E++++ + + + +++ ++ AE+ A +
Sbjct: 350 VRLGLLVSELVKQAQLQAKPEQVRARIEEFAENY-EQPAQVVSYYLADRQRRAEIEAIVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFD 443
ED V+ H+L+ ++ D KV FDQL
Sbjct: 409 EDNVVAHVLEKAKVTDEKVPFDQLMG 434
>gi|228204884|gb|ACP74153.1| trigger factor [Psychromonas arctica]
Length = 435
Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats.
Identities = 86/449 (19%), Positives = 214/449 (47%), Gaps = 16/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + + + F+ R+ + + GFRPGKVP S I +G
Sbjct: 1 MQVSVESTQGLERVLTITVAAEAFDKEFDARLRHLSKTQRVDGFRPGKVPASVIAKRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E EI++ E + A P++ + D ++++
Sbjct: 61 AVEQEVGGEIMQRNFYEAIVAEKLNPAGAPAV---------APLARKKGEDFVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ +++ D L V +++ ++D + + K + ++ +S+ D+VTVD+ S
Sbjct: 112 YPEVALTALDSLAVDTVATTIEDADLDNMLVTLQKQHAEWKDVARDSKNDDQVTVDFEGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + Q ++GS + +VG K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEVFEGGKAEGFQIVLGSERMIPGFETGIVGKKAGEEFNIDVTFPEDYHAEELKGKVA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V + + + + G ES + A++ + +++ + +++ K +L
Sbjct: 232 QFKINLTKVEEQILPELTEEFVKKFGVESGNLEALKEDVKKNMQRELDQVLKNTAKDNVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ +VP++LV+ E N + ++ + +++ E + + A++RV
Sbjct: 292 TALVENNEIEVPKALVDGEVNVLRKQAMERYGKQ----MDPNNLPELPAELFTEQAEKRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++V ++++ ++L + + +++++++ + + E
Sbjct: 348 KVGLLLGEVIKVNELKVDQDKV-ASLIENAASAYENPAEVVEYYKNNKELMQNMENVALE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ +D I++ ++ + K +FD++ + +
Sbjct: 407 EQAVDFIIEKAKVTEVKKSFDEVMNIPAA 435
>gi|262276279|ref|ZP_06054088.1| cell division trigger factor [Grimontia hollisae CIP 101886]
gi|262220087|gb|EEY71403.1| cell division trigger factor [Grimontia hollisae CIP 101886]
Length = 433
Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats.
Identities = 96/446 (21%), Positives = 215/446 (48%), Gaps = 18/446 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL+R L + +P+ + D+ + +I GFR GKVPL + +YGK
Sbjct: 1 MQVTVETTEGLERHLTITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVSRMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ ++ + E+++ E + K A P+ T + E DL + S+++
Sbjct: 61 AVRNDVMGEVMQRHFIEAIIKEKINPAGAPTFTPVDT---------EEGKDLVFKASFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ D ++V + + EV +++++ + + K ++ + +E +VT+D+T S
Sbjct: 112 YPEIELKDLDKVEVVKPLTEVKDEDVEEMIETLRKQQASWSEVDAAAEATSRVTMDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + ++G + + +VG K G++ I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAEGFALVMGQGRMIPGFEDGIVGKKAGEEFTIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + +V + + + R G E ++ + +++ + V+ K+K Q++
Sbjct: 232 KFDIKLIKVEAQELPELTEEFVARFGVEDGSVEGLKAEVRKNMERELKQAVKNKIKEQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +L++ E N + Q+ N+ + E + + AKRRV
Sbjct: 292 DGLVEHNNIDVPSALIDQEVNVLRQQAVQRFGG------NMKNAPELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE +++ + + + +++ +++K + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADEERVKALIEEMASAY-EDPAEVVAYYEKDQRLMDNMRNLALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
++ I+ +L + ++ +F +L +
Sbjct: 405 EQAIEALLAKANVSEKAQSFSELMNP 430
>gi|320178282|gb|EFW53256.1| Cell division trigger factor [Shigella boydii ATCC 9905]
Length = 436
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 88/437 (20%), Positives = 201/437 (45%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T S
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDVDVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + R G E +R + +++ + +R +VK Q +
Sbjct: 232 KFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +L+++E + + ++ N E + + AKRRV
Sbjct: 292 DGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + N ++ EE ++ + + + K++++ + K + +R E
Sbjct: 346 VVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRK 435
++ ++ +L ++ +++
Sbjct: 405 EQAVEAVLAKAKVTEKE 421
>gi|83644977|ref|YP_433412.1| trigger factor [Hahella chejuensis KCTC 2396]
gi|119370902|sp|Q2SK37|TIG_HAHCH RecName: Full=Trigger factor; Short=TF
gi|83633020|gb|ABC28987.1| trigger factor [Hahella chejuensis KCTC 2396]
Length = 446
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 102/462 (22%), Positives = 224/462 (48%), Gaps = 18/462 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + ++R + + +P+ ++ +R++ + GFRPGKVP+S +K YG+
Sbjct: 1 MQVSLESTSSIERRMTIGVPATQVNSEVEKRLQKTARTVRMNGFRPGKVPMSVVKKRYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E I E++++ E L K D A P + IE DL+ +++I
Sbjct: 61 GVRQEVIGEMMRDAYVEALQKEDLNPAGYPKFEPKK---------IEDGEDLEFIATFEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I + V ++ E+ + ++D + ++ + + ++ E + GD++T+D+
Sbjct: 112 YPEVSIGDLSSISVEKEDFEIVDADVDSMIEKLRQQSSEWKDSEDAAAEGDRLTIDFKGM 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S +N Q ++GS + + LVGLK GD+K ++ FPED+ ++L GK
Sbjct: 172 IDGEAFEGGSAQNAQIVIGSQRMIPGFEDGLVGLKAGDEKTLDLTFPEDYHAENLKGKLA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V +N++ + G + E A + + +++ + F + KVK+Q++
Sbjct: 232 QFEVKVSKVERSELPEINDEFFAQYGVQEGGEEAFKVEIRKNMEREARFAIANKVKQQVV 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + F+VP +LV++E N + + + + + A +RV
Sbjct: 292 DQLLGLSEFEVPSALVDSEVNRMREDAVQRFGGGQM------KASQLPAELFKDQAVKRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
TG++ + + NN+E TEE++++ + + + ++++ + P A++++ + E
Sbjct: 346 KTGLIFAQVVKDNNLEATEEQIEAKIRELASSY-QEPEQVVSWYMSNPEQKAQMQSVVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKV 460
D V+D + +I + V+++ + + + + S
Sbjct: 405 DVVVDFVADKAKIETKSVSYEDAVKPRTAPAEQAEDGEQSAE 446
>gi|89054104|ref|YP_509555.1| trigger factor [Jannaschia sp. CCS1]
gi|119370903|sp|Q28RY2|TIG_JANSC RecName: Full=Trigger factor; Short=TF
gi|88863653|gb|ABD54530.1| trigger factor [Jannaschia sp. CCS1]
Length = 441
Score = 249 bits (635), Expect = 6e-64, Method: Composition-based stats.
Identities = 132/451 (29%), Positives = 244/451 (54%), Gaps = 10/451 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ E +EGLKRE + +P++ L N ++E+ R + +KGFR GKVP++ +K +G
Sbjct: 1 MQITETLAEGLKREYTITVPASDLEARVNTKLEEARPEVEMKGFRKGKVPMALLKKQFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E + E + L + +R A++P + + + + D+ + ++Y+
Sbjct: 61 KVMGEAMQESVDEAMQGHLDESGDRPALQPEVKMT-------NEDWKEGDDIVVSMAYEK 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+I + +++ + + + E+ + +A+N +F K+ ++ GD+V D+ +
Sbjct: 114 LPEIPDVDYKAIKLEKLVVTPGDDEVKEALDNLAENAESFATKKGKAADGDQVVFDFVGT 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E S ++ +GS E LVG+K D+K++E FPED+ + LAGK
Sbjct: 174 VDGEAFEGGSAEDFPLKLGSGQFIPGFEEQLVGVKAKDEKDVEVSFPEDYQAEHLAGKAA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+IKEV P+P V+++LA + G E A++G S+++ + R +KR +LD
Sbjct: 234 VFACTIKEVKKPVPAEVDDELAKKFGAEDLEALKGQISERLGTEYKGAARAVMKRSLLDQ 293
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + +F++P SLVE E I ++ E N + + D + E + + LA RRV
Sbjct: 294 LDDVVSFELPPSLVEAEAKQIAHQLWHE---ENPEVEGHDHPEIETTEEHTSLAARRVKL 350
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G++L +G+KN++ V++ EM A+ Q ++PG E+ + Q+ A ++RAP+FEDK
Sbjct: 351 GLLLAELGQKNDVTVSDAEMTQAIMTQARQYPGQERAFFEFIQQNQQAQQQVRAPLFEDK 410
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
V+D I + ++ +++V+ D L E
Sbjct: 411 VVDFIGEMAEVSEKEVSKDDLKAAVDALDEE 441
>gi|317405214|gb|EFV85553.1| trigger factor [Achromobacter xylosoxidans C54]
Length = 436
Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats.
Identities = 94/446 (21%), Positives = 201/446 (45%), Gaps = 15/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + GL+R +D+ + + +++ + A + GFRPGK PL+ ++ +G
Sbjct: 1 MQPVVETLSGLERRVDLAVSVADVEKEVQAQLKRVARTAKVPGFRPGKAPLAMLERSHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + I+ + + + R A P++ G L ++++
Sbjct: 61 GIRYDVINSQVGRAFEQAVDGAKLRVAGAPNLEPKTEGV--------GEDTLAFTATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYTV 179
P++ + L VT+ V + E+ + + + K FE +E S+ GD+VT+D+
Sbjct: 113 YPEVAVPDLSALAVTRYETAVTDAEVQQTLDVLRKQRATFEAREGRASQDGDRVTLDFAG 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D V + ++ F++G + E E GLK G+ K FP+D+ K++AGK
Sbjct: 173 TIDGVPFDGGKAEDFPFVLGQGRMLPEFEEAARGLKAGESKVFPLKFPDDYQGKEVAGKT 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KEV + +N + A ++ I++ + + + K +
Sbjct: 233 AEFTITVKEVAEGVLPELNAEFAKSLGQAEGDIEKLKADIRSNIEREVKVRSQGRTKASV 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D + FDVP++LV+N+ + R E+ + + + ++RR
Sbjct: 293 MDALVEAGKFDVPKALVDNDVQSRIAAAREELKQRGVPNAESV---PIPAEAFSTESERR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+++ + ++ ++ E++++ + + + +++ ++ AE+ A +
Sbjct: 350 VRLGLLVSELVKQAQLQAKPEQVRARIEEFAENY-EQPAQVVSYYLADRQRRAEIEAIVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFD 443
ED V+ H+L+ ++ D KV FDQL
Sbjct: 409 EDNVVAHVLEKAKVTDEKVPFDQLMG 434
>gi|119370938|sp|Q1GUW1|TIG_SPHAL RecName: Full=Trigger factor; Short=TF
Length = 536
Score = 249 bits (635), Expect = 7e-64, Method: Composition-based stats.
Identities = 135/459 (29%), Positives = 254/459 (55%), Gaps = 17/459 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ +E +EGLKRE V I + + +E ++ I + GFRPGKVP + I+ ++G
Sbjct: 1 MKTVETLNEGLKREYRVTITAKDIDARVDEEVKSIAPTVRMPGFRPGKVPPNLIRKMHGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ ++ +++ I V ++++K R A++P++T+ + E D +L ++ ++
Sbjct: 61 ALSADALNKAIDAGVRDLMAKEKLRPALQPAVTL--------ADGYEAGKDAELTVALEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
LP+IE S D L++ + D+K + ++ E A FE K ++ GD+V +D+
Sbjct: 113 LPEIETPSIDGLKLERLTVPADDKAVMAKIEEFAAQMKRFEEAPKTRKAATGDQVIIDFA 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + + +++ +GS L + LVG+K GD+K ++ FPED+ ++ L GK
Sbjct: 173 GSVDGTPFDGGTGEDMAVEIGSGQLIPGFEDQLVGVKAGDEKTLKVTFPEDYPVETLKGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++KEV P ++++ A LG ES ++ L +++Q L R +KR++L
Sbjct: 233 LAEFAVTVKEVKVPAATKIDDEFAKSLGLESLDKLKELMKDQVEQELNGLTRTHMKRKLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + F+VP ++VE E+N I Q++ E S + + E D + Y +A RRV
Sbjct: 293 DQLAAAHDFEVPPTMVEAEFNQIWQQLEHEASHEEDP-EAAKAELENDREEYRAIAVRRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELRAPIF 417
G++L IG+ + ++V+++EMQ + Q ++ P ++ +++ Q+ A A+LRAP++
Sbjct: 352 RLGLLLSEIGQAHGVQVSQQEMQRLIMQAAQQYRPEDRQRFVEYVQQDALAAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDK 456
EDKV+D + + +I DR+ T ++L E++ E D
Sbjct: 412 EDKVVDFLFEKAEITDRETTREEL-----EAAIEADDDS 445
>gi|326386908|ref|ZP_08208522.1| trigger factor [Novosphingobium nitrogenifigens DSM 19370]
gi|326208588|gb|EGD59391.1| trigger factor [Novosphingobium nitrogenifigens DSM 19370]
Length = 505
Score = 249 bits (635), Expect = 8e-64, Method: Composition-based stats.
Identities = 135/452 (29%), Positives = 244/452 (53%), Gaps = 12/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ++E +EGLKR V I + + ++ I + + GFRPGKVP + ++ L+G
Sbjct: 1 MQIVETSNEGLKRAYTVTITATDIAARIEGEVKKIAPQVRMPGFRPGKVPTNLVRKLHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E + I+ + ++++ R A +P++++ EG E D +L +S ++
Sbjct: 61 SLHQEALQTTIRAALDQLVADHALRPATQPAVSLGEG--------YEEGKDAELTISLEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP IE S + L++ + + V + E+D +A I N F ++ ++ GD++ +D+
Sbjct: 113 LPVIETPSTEGLKLEKLVVPVSDAEVDEAVARIGANQKNFADAGEDAVAKDGDQLIIDFV 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E S ++ +GSA E LVG+K G++K I FPED+ + L GK
Sbjct: 173 GKLDGEPFEGGSAEDAPLELGSARFIPGFEEQLVGVKAGEEKTITVTFPEDYPAEQLKGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V P V N+D A +LG E +RGL +++Q + L R ++KRQ+L
Sbjct: 233 AATFDITVKQVKVPGEFVANDDFAKQLGLEGIDQLRGLIRGQLEQETAGLTRTQMKRQLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + F VP+S+V+ E+ I Q++ E S + + I E + Y +A+RRV
Sbjct: 293 DVLAAGHDFPVPDSMVDAEFEQIWQQLTHEASHEENPEEALKEI-EAEKDDYRRIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK-MLDHFQKYPNALAELRAPIF 417
G++L IG+ N + VT +EM+ + Q ++ +++ +++ + P A A+LRAP++
Sbjct: 352 RLGLLLSEIGQANGVVVTAQEMEMLIRQAAQQYREQDRQRFVEYIRSEPLAAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
EDKV+D + ++ +R+VT D+L
Sbjct: 412 EDKVVDFLFDKAEVAEREVTRDELQAAIEADE 443
>gi|329894940|ref|ZP_08270739.1| Cell division trigger factor [gamma proteobacterium IMCC3088]
gi|328922669|gb|EGG30004.1| Cell division trigger factor [gamma proteobacterium IMCC3088]
Length = 442
Score = 249 bits (634), Expect = 8e-64, Method: Composition-based stats.
Identities = 100/453 (22%), Positives = 213/453 (47%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + GL+R L V +P+ R+ D N+R++ + GFRPGKVP I+ +G+
Sbjct: 1 MQVSLETTSGLERRLTVGVPAQRIEDEVNKRLQQASKNVRLDGFRPGKVPFKVIRQRFGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E I E++ + E + + R A +PSI + ++ DL+ ++++
Sbjct: 61 GVRREVIGEVMGQTYQEAIMQEKLRPAGQPSIEPKQ---------LDAGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E + + + + EV ++++D + K + + E + GD V +DY
Sbjct: 112 FPEVEARDLKETTIERHVAEVTDEDVDNIIEIFRKQQGSMQEVERAAAEGDTVIIDYLGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D + + + +GS + + +VGLK GD+K +E FPED+ DL G V
Sbjct: 172 KDGEPFDGGAANDSSLELGSGRMIPGFEDGIVGLKAGDEKTLELSFPEDYHNDDLKGAAV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V + ++ L + G E R + +K+ + V VK+Q++
Sbjct: 232 TFDITVKAVKEQVLAPMDESLFEQYGVTEGGEEKFREEIAGNMKRELKNAVTASVKKQVM 291
Query: 299 DYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D + Y VP++LV+ E + Q++ + +Q +D + + A+ R
Sbjct: 292 DAVLATYEDVAVPKALVDQEIKAMRQQMFQQF--GGAPAQGLDLESLLPAEMFVERAEPR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+VL T+ + NI+ + ++ + + + +++++++ L + +
Sbjct: 350 VKLGLVLATLVSEYNIKPDADRVRETIEEIASTY-EDPEEVVNYYYSNQEQLNAIENRVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
ED+V++ + + +++ D+ ++ + ++
Sbjct: 409 EDQVVEKLQEQLKVEDKACSYQEAISAGQAANA 441
>gi|311107154|ref|YP_003980007.1| trigger factor [Achromobacter xylosoxidans A8]
gi|310761843|gb|ADP17292.1| trigger factor [Achromobacter xylosoxidans A8]
Length = 436
Score = 249 bits (634), Expect = 9e-64, Method: Composition-based stats.
Identities = 94/446 (21%), Positives = 201/446 (45%), Gaps = 15/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + GL+R +D+ + + +++ + A + GFRPGK PL+ ++ +G
Sbjct: 1 MQPVVETLSGLERRVDLAVSVADVEKEVQAQLKRVARTAKVPGFRPGKAPLAMLERSHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + I+ + + + R A P++ L ++++
Sbjct: 61 GIRYDVINGQVGRAFEQAVDGAKLRVAGAPNLEPKTDGV--------ADDTLAFTATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYTV 179
P++ + L VT+ V + E+ + + + K FE +E S+ GD+VT+D+
Sbjct: 113 YPEVAVPDLSTLAVTRYETAVTDAEVQQTLDVLRKQRATFEAREGRASQDGDRVTLDFAG 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D V E ++ F++G + E E GLK G+ K FP+D+ K++AGK
Sbjct: 173 TIDGVPFEGGKAEDFPFVLGQGRMLPEFEEAARGLKAGESKVFPLKFPDDYQGKEVAGKT 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KEV + +N++ A ++ I++ + + K +
Sbjct: 233 AEFTITVKEVAEGVLPELNSEFAKSLGQAEGDVEKLKADIRSNIEREVKVRSAGRTKSSV 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D + FDVP++LV+N+ G + R E+ + + + ++RR
Sbjct: 293 MDALVEAGKFDVPKALVDNDVQGRVAAAREELKQRGIPNAESV---PIPAEAFATESERR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+++ + ++ ++ E++++ + + + +++ ++ AE+ A +
Sbjct: 350 VRLGLLVSELVKQAQLQAKPEQVRARIEEFAENY-EQPAQVVSYYLADRQRRAEIEAIVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFD 443
ED V+ H+L+ ++ + KV FDQL
Sbjct: 409 EDNVVAHVLEKAKVTEEKVPFDQLMG 434
>gi|121605849|ref|YP_983178.1| trigger factor [Polaromonas naphthalenivorans CJ2]
gi|166229913|sp|A1VRH9|TIG_POLNA RecName: Full=Trigger factor; Short=TF
gi|120594818|gb|ABM38257.1| trigger factor [Polaromonas naphthalenivorans CJ2]
Length = 436
Score = 249 bits (634), Expect = 9e-64, Method: Composition-based stats.
Identities = 97/449 (21%), Positives = 213/449 (47%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P N + R++ + + GFRPGKVP+S + Y
Sbjct: 1 MAVTVENLEKLERKMTLTLPLNTIQSEVATRLKKLARTVKMDGFRPGKVPMSVVSQRYAY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E ++ R A +P I+ E + +L +++
Sbjct: 61 SVHYEVMNDKVGEAFAVAANEAKLRVAGQPRISEKEDAPE---------GELAFDAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
P ++I+ + +V + EV + ID+ + + K F + ++ GD+VT+D+
Sbjct: 112 YPDVKIADLANAEVEKLSAEVSDAAIDKTLDILRKQRRTFALRAADEPAQDGDRVTIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D ++ QFIVG + E + + G+K+G+ K FP D+ KD+AGK
Sbjct: 172 GKMDGETFAGGKAEDFQFIVGDGQMLKEFEDAVRGMKSGESKTFPLNFPADYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++K++ + VN +LA LG + +R + +++ +F + + K
Sbjct: 232 QADFLVTVKKIEAAHLPEVNEELAKSLGIADATVEGLRSDIKKNLEREVKFRLLARNKNA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + D+P + V+ E +++ R ++ K + I E + + A++
Sbjct: 292 VMDALVTNAELDLPNASVQAELERLIENARADLKQRGIKDADKAPIPE---ELFRPQAEK 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + N ++ E+++S + + + ++++ + + +AE+ A +
Sbjct: 349 RVRLGLVVAELVRANELQAKPEQLKSHIEELAASY-EKPQEVVRWYLSDNSRMAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V D +L ++ ++ ++FD+L +
Sbjct: 408 IENNVTDFVLGKAKVSEKAISFDELMGQN 436
>gi|332186834|ref|ZP_08388576.1| trigger factor [Sphingomonas sp. S17]
gi|332013167|gb|EGI55230.1| trigger factor [Sphingomonas sp. S17]
Length = 553
Score = 249 bits (634), Expect = 9e-64, Method: Composition-based stats.
Identities = 127/452 (28%), Positives = 242/452 (53%), Gaps = 12/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ +E +EGLKR + I + + + ++ I + + GFRPGKVP + ++ ++G
Sbjct: 1 MQTVETLNEGLKRAYTLTITAQDIEGKVDAELKRIAPQMKMPGFRPGKVPANLVRKMHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L + ++ ++E V +++++ R AM+P + + EG E D KL ++ ++
Sbjct: 61 ALLQDALNTALQEGVQTLIAEQGLRPAMQPQVELAEG--------YEQGQDAKLTVTLEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV- 179
LPQ+ + D L++ + V ++ +D Q+ + A ++ ++ V
Sbjct: 113 LPQVPTPAIDALKLERLTVPVADEAVDEQLQKFADQQKRWDDAGDKAAEQGDQVTVDFVG 172
Query: 180 -SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D V E S +++ +G L + LVG+K G++K+I FPED+ K+LAG+
Sbjct: 173 KTLDGVAFEGGSGEDMAVEIGGGRLIPGFEDQLVGVKAGEEKQISVTFPEDYPAKELAGQ 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +IK V + V++++A LG ES +RGL +I+Q L R +KR++L
Sbjct: 233 PATFDLTIKSVKTAGEAKVDDEMAKNLGLESLEQLRGLLKGQIEQEHNGLTRTYMKRKLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D +++ + F+VP S+VE E++ I ++ E + + + E++ Y +A+RRV
Sbjct: 293 DQLADGHDFEVPPSMVEAEFSQIWAQLEHEATHEEDP-EAAKAEMEKERDDYRKIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELRAPIF 417
G++L IG+ N ++VT +EM + Q ++ P ++ + + Q+ P A A+LRAP++
Sbjct: 352 RLGLLLSEIGQANGVDVTAQEMNRLIAQAAQQYGPEDRQRFIQYIQQEPMAAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
EDKV+D + +I DR+ T ++L
Sbjct: 412 EDKVVDFLFDKAEITDRETTREELEAAIESED 443
>gi|269961046|ref|ZP_06175415.1| trigger factor [Vibrio harveyi 1DA3]
gi|269834265|gb|EEZ88355.1| trigger factor [Vibrio harveyi 1DA3]
Length = 434
Score = 249 bits (634), Expect = 9e-64, Method: Composition-based stats.
Identities = 90/450 (20%), Positives = 213/450 (47%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVPL + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVEN---------NEGADLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + + V + EV++ +++ + + K + E +E G +V++D+ S
Sbjct: 112 YPEVELKGLESITVEKPTTEVNDADVEEMIETLRKQQATWAEVEEAAEAGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + EI+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIEGKTKGMEFEIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + +++ + V+ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVSKFGVAEGGVEALKAEVRKNMERELKQAVKNRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E + Q+ N ++ + + + AKRRV
Sbjct: 292 DGLVEQNEIDVPAALIDQEIQVLRQQASQRFGG------NPEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ +E++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADDEKVKALIEEMATAY-EDPSEVIAYYEQNEQMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ID I+ Q+ +++V+F++L + +
Sbjct: 405 EQAIDAIIAKAQVTEKEVSFNELLNQQPAA 434
>gi|310815615|ref|YP_003963579.1| trigger factor [Ketogulonicigenium vulgare Y25]
gi|308754350|gb|ADO42279.1| trigger factor [Ketogulonicigenium vulgare Y25]
Length = 443
Score = 249 bits (634), Expect = 1e-63, Method: Composition-based stats.
Identities = 123/453 (27%), Positives = 225/453 (49%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L E++++ + +KGFR GKVP + +K +G
Sbjct: 1 MQVTETLNEGLKRGYAITVTAAELDAKVREKLDEAAPEIEMKGFRKGKVPFALLKKQFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + E + + + L+ +R AM+P + + + + D+++ LSY+
Sbjct: 61 RLLGEAMQEAVDGAINDHLAATGDRPAMQPEVKMT-------NEDWQEGQDVEVTLSYET 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP + +++T+ + D+ ID +A +A + FE + +++ GD+V +D+
Sbjct: 114 LPAVPEVDLSGVEITRLSVKADDAAIDEALANLADTSKQFEDRRKGSKAKDGDQVVIDFL 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + ++ ++GS E LVG+K + K++E FPE++ LAGK
Sbjct: 174 GKVDGEAFEGGAAEDYPLVLGSNSFIPGFEEGLVGVKVDEVKDVEVTFPENYGAAHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K V P +N++LA + G E ++ + ++ R KR +L
Sbjct: 234 AAVFTCTVKAVKEPKAAELNDELAKQFGAEDLEGLKKQIATSLEGEFAGASRAVAKRALL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +F++PE LVE E I ++ E + + N + + LA RRV
Sbjct: 294 DKLDTLVSFELPEVLVEAEAGQIAHQLYHE---EHPEDTNHTHGEIVTTDEHRKLAVRRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+KN I+VT+ E+ A+ Q ++ G E++ + Q+ A +++APIFE
Sbjct: 351 KLGLLLAELGQKNEIKVTDSELTQAILNQARQYRGQERQFFEFVQQNAAARQQIQAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+D I V++ ++ T + L E
Sbjct: 411 DKVVDFIFSQVKVEEKDATKEDLQAAVEALDVE 443
>gi|332992306|gb|AEF02361.1| trigger factor [Alteromonas sp. SN2]
Length = 434
Score = 249 bits (634), Expect = 1e-63, Method: Composition-based stats.
Identities = 86/448 (19%), Positives = 226/448 (50%), Gaps = 16/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P++ + + R++ + I GFRPGKVP+S IK +G+
Sbjct: 1 MQVSVETTQGLERRLTITVPADAIDSAVKSRLQQLAKTQRINGFRPGKVPVSVIKKRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E +++++ + + + + A P+ + + E DL+ S+++
Sbjct: 61 AVRQEIAGDVMQQNFYQAIVQEKIQPAGMPNFELTK---------DEDGQDLEFVASFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +D+++ + + E+ ++++D M + K + +++ + +++ DKV +D+ S
Sbjct: 112 YPEVEVKGINDIEIEKPVVEITDEDLDNMMVTLQKQHASWKEVKRKAKKDDKVVIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ + +G + + LVG K G++ +E FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAEDFELELGQDRMIPGFEKPLVGAKAGEEVTVEVAFPEDYHAENLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K+V V+ + A G + A++ + +++ + ++ +VK ++
Sbjct: 232 VFQVTVKKVEGQSLPKVDEEFATLFGVQEGGVDALKAEVRKNMQRELDQTLKTQVKEDVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + D+P++L++ E N + ++ + S ++ E + + AKRRV
Sbjct: 292 AKLVDANELDIPQALIDQEVNALREQAKQRFSQQG----GGQNLPELPAELFTDNAKRRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + ++N ++ E ++ + + +++++++ + +++ E
Sbjct: 348 SIGLLLGEVIKQNELKADEAKVNEMI-ETAASAYEDPQEVVEYYNNNQELMQQMQNVALE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L+ ++ + FD++ + +
Sbjct: 407 EQAVEWVLEQAKVTEVTKAFDEVMNKQA 434
>gi|260768948|ref|ZP_05877882.1| cell division trigger factor [Vibrio furnissii CIP 102972]
gi|260616978|gb|EEX42163.1| cell division trigger factor [Vibrio furnissii CIP 102972]
gi|315180644|gb|ADT87558.1| trigger factor [Vibrio furnissii NCTC 11218]
Length = 434
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 88/450 (19%), Positives = 216/450 (48%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVSAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E + DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVEA---------KEGADLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + E+ E ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLENITVEKPAAEITEADVAEMLETLRKQQATWKEVDEAAEEGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E +N +G+ + + + G G + EI+ FPED+ ++L GK
Sbjct: 172 IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIAGKTKGMEFEIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + + + + ++ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPEMNDEFVAKFGVADGGVDALKAEVRKNMDRELKQAIKARIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP +L++ E N + Q+ N+++ + + + AKRRV
Sbjct: 292 EGLVKENDIDVPSALIDQEINVLRQQAAQRFGG------NMEAASQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKAEELKADEEKVKALIEEMATAY-EDPTEVIAYYEQNEQMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ID I+ Q+ ++ ++F++L + +
Sbjct: 405 EQAIDAIIAKAQVTEKAISFNELMNPQVAA 434
>gi|134094959|ref|YP_001100034.1| trigger factor [Herminiimonas arsenicoxydans]
gi|166229893|sp|A4G5X2|TIG_HERAR RecName: Full=Trigger factor; Short=TF
gi|133738862|emb|CAL61909.1| Trigger factor (TF) [Herminiimonas arsenicoxydans]
Length = 448
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 102/460 (22%), Positives = 209/460 (45%), Gaps = 26/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + +R++ GFR GKVP+ + YG
Sbjct: 1 MATAVETLDKLERRITITVPVAEVQTEVEKRLKVRARTVKAPGFRAGKVPMKMVAQQYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I +E +++ + + E S+ R A P I L +++I
Sbjct: 61 QIENEVLNDKVGQAFGEATSENKLRVAGYPKIE--------AKNDDVAEGTLAFNATFEI 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+I++ +V + I EV + EID+ + + K V + VK +S
Sbjct: 113 YPEIKVGDLASAEVEKTIVEVSDAEIDKTIDILRKQRVHYHVKGEQSAHGDGGSDLTAKN 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
D+VT+D+ +++ V + + F++G + +E +GLK G+ K FP D
Sbjct: 173 SDRVTIDFVGTINGVEFQGGKAEGYAFVLGEGRMLAEFEAGTIGLKVGESKTFPLSFPAD 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ D+AGK ++K++ V+ + A LG E MR Q +++
Sbjct: 233 YHGADVAGKTAEFTITLKQIEWAHMPEVDAEFAKSLGIEDGDLEKMRADVKQNLEREVSN 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
V+ + K ++D + FDVP+ L++ E +++ R +M+ K ++ E
Sbjct: 293 RVKARTKDSVMDALIKISEFDVPKVLIDQETQRLMESTRQDMAQRGMKVSDLPFPPELFT 352
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A+RRV G++L + + N ++ E++++ + + + ++L ++ +
Sbjct: 353 E----QAERRVRLGLILAEVVKANELQAKPEQVKAQVEEFAQSY-EDPTQVLKYYFSDRS 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
LAE+ A + E+ V++++L ++ D+ V FD+L N+++
Sbjct: 408 RLAEVEALVLEENVVNYVLGKAKVADKSVAFDELMGNNAQ 447
>gi|156973711|ref|YP_001444618.1| trigger factor [Vibrio harveyi ATCC BAA-1116]
gi|166229953|sp|A7MV84|TIG_VIBHB RecName: Full=Trigger factor; Short=TF
gi|156525305|gb|ABU70391.1| hypothetical protein VIBHAR_01416 [Vibrio harveyi ATCC BAA-1116]
Length = 435
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 91/451 (20%), Positives = 214/451 (47%), Gaps = 18/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVPL + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVEN---------NEGADLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ D + V + EV++ +++ + + K + E +E G +V++D+ S
Sbjct: 112 YPEVELKGLDSITVEKPTTEVNDSDVEEMIETLRKQQATWAEVEEAAEAGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + EI+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIEGKTKGMEFEIDVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + +++ + V+ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVSKFGVAEGGVEALKAEVRKNMERELKQAVKNRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E + Q+ N ++ + + + AKRRV
Sbjct: 292 DGLVEQNEIDVPAALIDQEIQVLRQQAAQRFGG------NPEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ +E++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADDEKVKALIEEMATAY-EDPSEVIAYYEQNEQMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
++ ID I+ Q+ +++V+F++L + ++
Sbjct: 405 EQAIDAIIAKAQVSEKEVSFNELLNQQQPAA 435
>gi|99080874|ref|YP_613028.1| trigger factor [Ruegeria sp. TM1040]
gi|118574087|sp|Q1GHV0|TIG_SILST RecName: Full=Trigger factor; Short=TF
gi|99037154|gb|ABF63766.1| trigger factor [Ruegeria sp. TM1040]
Length = 443
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 131/453 (28%), Positives = 237/453 (52%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + IP+ L + N ++ + + + +KGFR GKVP+ +K +G
Sbjct: 1 MQVTETLNEGLKRGYAITIPATELEEKVNAKLAEAQPEIEMKGFRKGKVPMPLLKKQFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E + + + + +R A++P + + + + D+ + +SY+
Sbjct: 61 RLMGEVMQEAVDGAMNKHFEESGDRPALQPDVKMT-------NEDWKEGDDVNVEMSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I +++ + + + ++ + + +A + FE +E SE GD+V +D+
Sbjct: 114 LPAIPEVDVSGVELEKLVVKAEDAAVTEALENLASSAQEFEAREEGAASEDGDQVVIDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + S ++ +GS E LVG+K GD K++ FPE++ + LAGK
Sbjct: 174 GKVDGEAFDGGSAEDYPLTLGSNSFIPGFEEQLVGVKAGDAKDVTVTFPEEYGAEHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++KEV +P +N++LA + G E ++G S++++ RQ +KR L
Sbjct: 234 EAVFSCTVKEVKAPKAAEINDELAKKFGAEDLDQLKGQISERLEAEYAGAARQVMKRAAL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ +FD+P SLVE E I ++ E N Q D + E ++ LA+RRV
Sbjct: 294 DALAELVSFDLPPSLVEAEAKQIAHQLWHE---ENPDVQGHDHPEIEPTDEHNKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K +EVT++EM A+ QQ ++PG E++ + Q+ +LRAPIFE
Sbjct: 351 RLGLLLAEMGQKAEVEVTDQEMTQAIMQQARQYPGQERQFFEFIQQNAQMQQQLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKVID + ++ +++V+ + L E
Sbjct: 411 DKVIDLVFDQAKVSEKEVSKEDLQKAVEALEEE 443
>gi|84387734|ref|ZP_00990750.1| trigger factor [Vibrio splendidus 12B01]
gi|218710175|ref|YP_002417796.1| trigger factor [Vibrio splendidus LGP32]
gi|254789032|sp|B7VI01|TIG_VIBSL RecName: Full=Trigger factor; Short=TF
gi|84377417|gb|EAP94284.1| trigger factor [Vibrio splendidus 12B01]
gi|218323194|emb|CAV19371.1| Trigger factor [Vibrio splendidus LGP32]
Length = 432
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 213/448 (47%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E DL ++++
Sbjct: 61 AVRQDVMGEVMQRHFIEAIVKEKINPAGAPTFAPVEN---------NEGADLVFNATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV E +++ + + K + E ++ G + T+D+ S
Sbjct: 112 YPEVELKGLENITVEKPAVEVKEADVEEMIETLRKQQATWTEVEAAADAGSRATIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + +VG G + EIE FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTAGMEFEIEVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + + +V + +N + + E ++ + +++ + V+ ++K Q +D
Sbjct: 232 KFSIKLNKVEARELPELNEEFVSKFGAAEGVEGLKAEVRKNMERELKQAVKNRIKEQAID 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ N+ DVP +L++ E + Q+ N ++ D+ + + AKRRV+
Sbjct: 292 GLVNENNIDVPSALIDQEIGVLRQQAAQRFGG------NTEAADQLPRELFEEQAKRRVV 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++LG + + ++ +E++++ + + + +++ ++++ + +R E+
Sbjct: 346 VGLLLGEVIKTEELKADDEKVKAIIEEMATAY-EDPTEVIAYYEQNEQMMNNMRNVALEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ID I+ Q+ D++V+F++L +
Sbjct: 405 QAIDAIIAKAQVSDKEVSFNELMNQQPA 432
>gi|110680241|ref|YP_683248.1| trigger factor [Roseobacter denitrificans OCh 114]
gi|118574086|sp|Q164N1|TIG_ROSDO RecName: Full=Trigger factor; Short=TF
gi|109456357|gb|ABG32562.1| trigger factor (TF), putative [Roseobacter denitrificans OCh 114]
Length = 443
Score = 248 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 127/453 (28%), Positives = 241/453 (53%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 1 MQVTETLNEGLKRGYAIKVTAAELDAKVNEKLAEAQPEVEMKGFRKGKVPMALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E I + + + +R AM+P + + + + D+++ +SY+
Sbjct: 61 KVMGEAMQESIDGAMNDHFTSSGDRPAMQPEVKMT-------NENWKEGDDIEVSMSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I F +++ + + D+ ID + +A+ FE ++ +++ GD++ +D+
Sbjct: 114 LPDIPDVDFSAIELERMTVKADDAAIDEALGSLAETAQNFENRKKGSKAKDGDQIVMDFL 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + + ++ ++GS E LVG+K G++K + FPE++ ++LAGK
Sbjct: 174 GKVDGEAFDGGAAEDYPLVLGSNSFIPGFEEQLVGVKAGEEKAVTVTFPENYQAENLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++KEV P+P ++++LA + G E +A++G +++++ R +KR +L
Sbjct: 234 EAVFECTVKEVKKPVPAEIDDELAKKFGAEDLAALKGQIAERLEAEYAGAARAIMKRSLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD+P SLV E I ++ E N Q D + + + LA+RRV
Sbjct: 294 DALDDIVDFDLPPSLVSAEAGQIAHQLWHE---ENPDVQGHDHPEITPTEEHTKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG+K +EVT+ EM A+ Q ++PG E++ + Q+ ++RAPIFE
Sbjct: 351 RLGLLLADIGQKAKVEVTDAEMSQAIMNQARQYPGQERQFFEFVQQNQQMQQQMRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+DH+ ++ +++V+ D L E
Sbjct: 411 DKVVDHVFAGAKVTEKEVSKDDLQKAVEALEEE 443
>gi|33601236|ref|NP_888796.1| trigger factor [Bordetella bronchiseptica RB50]
gi|41018191|sp|Q7WK84|TIG_BORBR RecName: Full=Trigger factor; Short=TF
gi|33575671|emb|CAE32749.1| trigger factor [Bordetella bronchiseptica RB50]
Length = 436
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 94/446 (21%), Positives = 207/446 (46%), Gaps = 15/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + GL+R +D+ + + +++ + A + GFRPGK PL+ ++ +G
Sbjct: 1 MQPVVETLSGLERRVDLAVSVAEVEKEVQAQLKRVGRTAKVAGFRPGKAPLAMLERSHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + I+ ++ + + R A P++T L ++++
Sbjct: 61 GIRYDVINSLVGRAFEQAVDGAKLRVAGSPTLTPKTEGV--------ADDTLAFTATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYTV 179
P++ + L VT+ V + E+++ + + K FE +E S+ GD+V +D+
Sbjct: 113 YPEVTVPDLSALAVTRYDTPVTDAEVNQTLDVLRKQRAKFETREGRASQDGDRVVLDFAG 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D V E ++ F++G + E E +GLK G+ K FP+D+ K++AGK
Sbjct: 173 TIDGVPFEGGKAEDFPFVLGQGRMLPEFEEAALGLKAGESKVFPLKFPDDYQGKEVAGKT 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KEV + V+ + A ++ I++ + ++ + K +
Sbjct: 233 AEFTITVKEVAEGVLPEVDAEFAKSLGQAEGDVEKLKADIRTNIEREVKARLQGRTKGSV 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D + FDVP++LV+++ G + R E+ + + + + ++RR
Sbjct: 293 MDALVEAGKFDVPKALVDSDVEGRIAAAREELKQRGVPNADSV---PMPAEVFSTESERR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+++ + ++ ++ E++++ + + + +++ ++ AE+ A +
Sbjct: 350 VRLGLLVSELVKQAQLQAKPEQVRARIEEFAQNY-EQPAQVVSYYLADRQRRAEIEAIVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFD 443
ED V+ H+L++ ++ D KV FDQL
Sbjct: 409 EDNVVAHVLENAKVADEKVPFDQLMG 434
>gi|163759428|ref|ZP_02166513.1| trigger factor [Hoeflea phototrophica DFL-43]
gi|162283025|gb|EDQ33311.1| trigger factor [Hoeflea phototrophica DFL-43]
Length = 473
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 159/450 (35%), Positives = 282/450 (62%), Gaps = 1/450 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKREL VI+P+ + NE++ D + K IKGFRPGKVP+SHIK +YG+
Sbjct: 1 MQVTETLAEGLKRELKVIVPAKDMEAQLNEKLADAKGKMQIKGFRPGKVPISHIKKVYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++++ ++E+I+E ILS R E+AA +P I++ E E + +++ D + +++Y++
Sbjct: 61 SMMAQMVNEMIQEKPTSILSDRGEKAATQPEISMTEDEKE-AESILKCEADFEFKMAYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P+ E++ +V +++ EV ++E++ Q+ +A+N+ ++E K ++ GDKVT+DY
Sbjct: 120 IPEFEVADPSSFKVVREVVEVSDEEVEEQVLRVAENSRSYEPKTGKAADGDKVTIDYLGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + + ++ + ++GS E LVG+K GD+K I FP D+ LAGK+
Sbjct: 180 VDGEAFDGGADQDAELVIGSNRFIPGFEEQLVGVKVGDEKVITVSFPADYQAAHLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +K + +P + +N+++A LG +S +R + +I+ + RQKVKRQILD
Sbjct: 240 TFDIKVKAIAAPGALEINDEVAKSLGLDSAEKLREIVKSQIESQYGQMTRQKVKRQILDQ 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + F+ P L++ E+ I +++ E++ + + + +E + Y LA+RRV
Sbjct: 300 LDSAHKFESPSKLIDAEFENIWRQINQELADNGKTFDDEGTTEEAAREEYLKLAERRVRL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+VL IGE I+V++EE+Q +L++Q+ +FPG E+++ ++FQK P A+A LRAPIFE+K
Sbjct: 360 GLVLSKIGESAEIQVSDEELQRSLFEQVRKFPGQEQEIYEYFQKTPGAVASLRAPIFEEK 419
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
IDH++ + + D+ VT ++L + +
Sbjct: 420 TIDHLMTVIDVTDKTVTKEELMADDEAEAE 449
>gi|254466589|ref|ZP_05080000.1| trigger factor [Rhodobacterales bacterium Y4I]
gi|206687497|gb|EDZ47979.1| trigger factor [Rhodobacterales bacterium Y4I]
Length = 443
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 124/453 (27%), Positives = 243/453 (53%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L + NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 1 MQVTETLNEGLKRGYAITVTAAELDEKVNEKLVEAQPEIEMKGFRKGKVPMALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E I + + +R A++P + + + + D+ + +SY+
Sbjct: 61 RLMGEAMQESIDGAMNKHFEDSGDRPALQPEVKMT-------NEDWKEGDDVNVEMSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYT 178
LP+I F +++ + + + +++ ++ +A +A+ FE +E + D+V +D+
Sbjct: 114 LPEIPEVDFSGIELEKLVVKAEDEAVNEALANLAETAKEFEAREEGAAAEDGDQVVIDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E + + ++GS E LVG K G++K++ FPE++ + LAGK
Sbjct: 174 GKIDGEAFEGGAGDDYPLVLGSNSFIPGFEEQLVGTKAGEEKDVTVSFPEEYGAEHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++KEV +P ++++LA + G + A++G +++++ R +KR +L
Sbjct: 234 EAVFSCTVKEVKAPKAAEIDDELAKKFGSDDLDALKGQIAERLEAEYAGAARAVLKRALL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +FD+P SLV+ E I ++ E N + + + + E + + LA+RRV
Sbjct: 294 DKLDALVSFDLPPSLVDAEAKQIAHQLWHE---DNPEVHDHNHGEIEPTEEHVKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K +EVT+ EM A+ Q ++PG E++ + QK +LRAPIFE
Sbjct: 351 RLGLLLAELGQKAEVEVTDAEMTQAIMSQARQYPGQERQFFEFIQKNVQMQQQLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+DHI+ ++ +++V+ D+L E
Sbjct: 411 DKVVDHIVGQAKVEEKEVSKDELQKAVEALEEE 443
>gi|77165154|ref|YP_343679.1| trigger factor [Nitrosococcus oceani ATCC 19707]
gi|254433678|ref|ZP_05047186.1| trigger factor [Nitrosococcus oceani AFC27]
gi|119370913|sp|Q3JAJ7|TIG_NITOC RecName: Full=Trigger factor; Short=TF
gi|76883468|gb|ABA58149.1| Trigger factor [Nitrosococcus oceani ATCC 19707]
gi|207090011|gb|EDZ67282.1| trigger factor [Nitrosococcus oceani AFC27]
Length = 443
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 107/457 (23%), Positives = 221/457 (48%), Gaps = 16/457 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R L + +P + ER+ + + + GFRPGKVP ++ YG
Sbjct: 1 MQVTVEATGELERRLTITLPGSDFESKVQERLRSMVPRIKMDGFRPGKVPYKVVERRYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E DE +++ + + + R A P I + +E +++++
Sbjct: 61 AVRQEVSDEFVRDSFRDAIKQESLRPAGMPQIEPPQ---------LEAGESFAYTVTFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+IE + +++ Q EV +K+I+ + ++ + ++ +E E ++ D VT+ Y S
Sbjct: 112 LPEIESVKLEGIKIKQPRAEVTDKDIEGVLKKLQEQHIEWEPMERPAQEADGVTITYHGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ SK+N I+G E E L+G+ G + E FPE + ++LAGKK
Sbjct: 172 IEGKPFPGGSKENFFVILGKGTTLKEFEEHLIGVNKGQELTFEITFPEHYGNQELAGKKA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ V +P +N D A +LG + +A+R + ++ E VR +V+ QI+
Sbjct: 232 SFAVKVISVTAPRLPEINEDFAEKLGVKEGGVAALRQEIKASMTRNLEQAVRDRVREQIM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +P SLV+ E + +L++ + ++ Q + + ++ A+RRV
Sbjct: 292 DGLLVANPTTLPISLVKEETSILLEQAKNNLAKQGVNPQEISLDESPFVE----QARRRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++ TI EK I+ +++++ + + + ++ L+E+ + E
Sbjct: 348 ALRLIFSTILEKQEIKADQDKIKQRVTELAASY-EDPEEFSRWIFSDRERLSEIENAVME 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
++ID +L V+++D+ ++F+++ + S+ EK+ D
Sbjct: 407 TQIIDWVLDQVEVLDKSMSFEEVVNPQISSAKEKVQD 443
>gi|33596621|ref|NP_884264.1| trigger factor [Bordetella parapertussis 12822]
gi|41018189|sp|Q7W8X3|TIG_BORPA RecName: Full=Trigger factor; Short=TF
gi|33573322|emb|CAE37305.1| trigger factor [Bordetella parapertussis]
Length = 436
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 94/446 (21%), Positives = 207/446 (46%), Gaps = 15/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + GL+R +D+ + + +++ + A + GFRPGK PL+ ++ +G
Sbjct: 1 MQPVVETLSGLERRVDLAVSVAEVEKEVQAQLKRVGRTAKVAGFRPGKAPLAMLERSHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + I+ ++ + + R A P++T L ++++
Sbjct: 61 GIRYDVINSLVGRAFEQAVDGAKLRVAGSPTLTPKTEGV--------ADDTLAFTATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYTV 179
P++ + L VT+ V + E+++ + + K FE +E S+ GD+V +D+
Sbjct: 113 YPEVTVPDLSALAVTRYDTPVTDAEVNQTLDVLRKQRAKFETREGRASQDGDRVVLDFAG 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D V E ++ F++G + E E +GLK G+ K FP+D+ K++AGK
Sbjct: 173 TIDGVPFEGGKAEDFPFVLGQGRMLPEFEEAALGLKAGESKVFPLKFPDDYQGKEVAGKT 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KEV + V+ + A ++ I++ + ++ + K +
Sbjct: 233 AEFTVTVKEVAEGVLPEVDAEFAKSLGQAEGDVEKLKADIRTNIEREVKARLQGRTKGSV 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D + FDVP++LV+++ G + R E+ + + + + ++RR
Sbjct: 293 MDALVEAGKFDVPKALVDSDVEGRIAAAREELKQRGVPNADSV---PMPAEVFSTESERR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+++ + ++ ++ E++++ + + + +++ ++ AE+ A +
Sbjct: 350 VRLGLLVSELVKQAQLQAKPEQVRARIEEFAQNY-EQPAQVVSYYLADRQRRAEIEAIVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFD 443
ED V+ H+L++ ++ D KV FDQL
Sbjct: 409 EDNVVAHVLENAKVADEKVPFDQLMG 434
>gi|197335332|ref|YP_002155556.1| trigger factor [Vibrio fischeri MJ11]
gi|226738697|sp|B5FBZ7|TIG_VIBFM RecName: Full=Trigger factor; Short=TF
gi|197316822|gb|ACH66269.1| trigger factor [Vibrio fischeri MJ11]
Length = 432
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 88/448 (19%), Positives = 206/448 (45%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L + +P+ + D+ + + +I GFR GKVP+ + +YG+
Sbjct: 1 MQVTVETKEGLERVLTITVPAANIEDAVSAELRNIAKNRRFDGFRKGKVPMKMVAKMYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ ++ + E+++ E + K A P+ T E DL S+++
Sbjct: 61 AVRNDVMGEVMQRHFIEAIVKEKINPAGAPTFTPVE---------FAEGKDLVFSASFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + D + V + EV ++++ + + K + + +E G + T+++ S
Sbjct: 112 YPEVALQGLDKVVVEKPQVEVKDEDVAEMLETLRKQQSTWADADIAAEDGTRATINFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G + + + G K GD+ I+ FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGQGRMIPGFEDGIKGKKAGDELTIDVNFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + +V + +N++ + G E ++ + +++ V+ K+K Q ++
Sbjct: 232 QFAIKVVKVEARELPELNDEFVAKFGAEGGVEGLKAEVRKNMERELAQAVKNKIKEQAIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + DVP +L++ E + Q+ N D+ E + + AKRRV+
Sbjct: 292 GLVEQNNIDVPSALIDQEVQVLRQQAVQRFGG------NADTAPELPRELFEEQAKRRVV 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++LG + + ++ +E++++ + + + +++ +++ + +R E+
Sbjct: 346 VGLLLGEVIKSEELKADDEKVKALINEMASAY-EDPTEVVAYYEGNEQMMNNMRNVALEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ IL Q+ ++ F++L +
Sbjct: 405 QAVEAILAKAQVSEKAFGFNELMNQQPA 432
>gi|149675720|dbj|BAF64740.1| FKBP type peptidyl-prolyl cis-trans isomerase [Shewanella
livingstonensis]
Length = 488
Score = 248 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 92/441 (20%), Positives = 199/441 (45%), Gaps = 19/441 (4%)
Query: 8 SEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETI 67
+ L+R L + +P+ ++ + + +A + GFRPGKVP+ I YGK+I +
Sbjct: 62 LKALERRLTISVPAEQIEKLVKDNVLREAKRARLPGFRPGKVPIGEINKRYGKAIRQDIT 121
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
E+++ E + A P T + +++I P++ ++
Sbjct: 122 GEVMQRNFIEAIVAEKLNPAGAPVFTPGST----------EGDSFEFVATFEIYPEVVLT 171
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
D + V Q EV++ ++D + + K + F E + DKV +++ S+D E
Sbjct: 172 GLDSIAVEQPKAEVNDADVDVMIETLRKQHATFAPVERAAVADDKVKMNFIGSIDGEEFE 231
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ + +GS + +VG KTGD+ EIE FPED+ ++L GK + ++
Sbjct: 232 GGKADDFELQLGSNRMIPGFETGIVGHKTGDEFEIEVTFPEDYHAENLKGKAAKFVITLT 291
Query: 248 EVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
EV + VN++ A G A++ + + + E ++ VK Q++ +
Sbjct: 292 EVQAANLPKVNDEFASLFGIAEGGLDALKAEIRKNMTRELEQALKANVKEQVITGLLAAN 351
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLG 365
+P++LVE E N + Q+ +++ E + + A+RRV G++LG
Sbjct: 352 DIAIPKALVEGEVNVLRQQAMQRFGGQ------TENMPELPAELFTEQAERRVKIGLLLG 405
Query: 366 TIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHI 425
+ + N ++ ++ + + + + +++ ++ + +R E++ ++ +
Sbjct: 406 EVIKTNELKAEDDRVNTLIESMASAY-EDPSEVVSYYNSNKELMQNMRNVALEEQAVEAL 464
Query: 426 LKSVQIVDRKVTFDQLFDNSS 446
LKS ++ + V F++ + ++
Sbjct: 465 LKSSKVTVKDVAFEEFMNKAT 485
>gi|221198218|ref|ZP_03571264.1| trigger factor [Burkholderia multivorans CGD2M]
gi|221209200|ref|ZP_03582192.1| trigger factor [Burkholderia multivorans CGD2]
gi|221170938|gb|EEE03393.1| trigger factor [Burkholderia multivorans CGD2]
gi|221182150|gb|EEE14551.1| trigger factor [Burkholderia multivorans CGD2M]
Length = 448
Score = 248 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 102/461 (22%), Positives = 214/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKETVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + +SD ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFAPKQEQSD---------DAYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V F + E
Sbjct: 112 YPEVKIGDLSTAEVERSTTTIGDAEIDRTLDILRKQRVHFHARGEAGEHGDGGADTAAQN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + ++ F++G + E + +GLK G+ + + FP+D
Sbjct: 172 GDRVTVDFVGKIDDVAFPGGTAEDFPFVLGEGRMLPEFEQAALGLKAGESRTFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ + A LG E MR + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKVEWPHLPEIDGEFAKSLGIEDGDLTKMRNEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQAIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 448
>gi|163857104|ref|YP_001631402.1| trigger factor [Bordetella petrii DSM 12804]
gi|226738673|sp|A9IR57|TIG_BORPD RecName: Full=Trigger factor; Short=TF
gi|163260832|emb|CAP43134.1| trigger factor [Bordetella petrii]
Length = 436
Score = 248 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 92/446 (20%), Positives = 200/446 (44%), Gaps = 15/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + GL+R +D+ + + +++ + A + GFRPGK PL+ ++ +G
Sbjct: 1 MQPVVETLSGLERRVDLAVSVADVEKEVQAQLKRVARTAKVPGFRPGKAPLAMLERSHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + I+ + + + R A P++ L ++++
Sbjct: 61 GIRYDVINGQVGRAFEQAVDGAKLRVAGSPTLEPKTEGV--------ADDTLAFTATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYTV 179
P++ + L VT+ V + E+ + + + K FE +E ++ GD+VT+D+
Sbjct: 113 YPEVAVPDLSALSVTRYETAVTDAEVQQTLDVLRKQRANFEAREGRAAQDGDRVTLDFAG 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D V E ++ F++G + E GLK G+ K FP+D+ K++AGK
Sbjct: 173 TIDGVPFEGGKAESFPFVLGQGRMLPEFEAAAKGLKAGETKVFPLKFPDDYQGKEVAGKT 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KEV + VN + A ++ I++ ++ + + K +
Sbjct: 233 AEFTITVKEVAEGVLPEVNAEFAKSLGQAEGDVEKLKADIRTNIEREAKARTQGRTKASV 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D + FDVP++LV+++ +Q R E+ + + + ++RR
Sbjct: 293 MDALVEAGKFDVPKALVDSDVQSRVQAAREELKQRGVPNAESV---PIPAEAFATESERR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+++ + ++ ++ E++++ + + + +++ ++ AE+ A +
Sbjct: 350 VRLGLLVSELVKQAQLQAKPEQVRARIEEFAQNY-EQPAQVVSYYLADRQRRAEIEAIVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFD 443
ED V+ H+L ++ + KV FDQL
Sbjct: 409 EDNVVQHVLDKAKVTEEKVPFDQLMG 434
>gi|56478264|ref|YP_159853.1| trigger factor [Aromatoleum aromaticum EbN1]
gi|67461654|sp|Q5P162|TIG_AZOSE RecName: Full=Trigger factor; Short=TF
gi|56314307|emb|CAI08952.1| Trigger factor (TF) [Aromatoleum aromaticum EbN1]
Length = 434
Score = 248 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 100/448 (22%), Positives = 208/448 (46%), Gaps = 16/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ ++ L+R +D+ +P + + R++ + + GFRPGKVP+ + YG
Sbjct: 1 MQTTQETQGALERRIDMSVPMAEIDKEVDSRLKRMARTVKMPGFRPGKVPMKIVAQTYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SE I +++ + + +++ R A P I E + L+ +++
Sbjct: 61 QARSEAIGAAVEKAFGDKVREQNLRVAGYPRIEPREAAVEGA---------LEFSAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
PQ+ + +V + + V + E+D+ + + K FE + ++ GD+V +D+
Sbjct: 112 YPQVPLGDLSGQKVERPVLTVGDAEVDKTIEVLRKQRTTFEAVDRPAQDGDRVVIDFAGR 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D + E ++ F++G+ + + + GLK G+ K E FPED+ DLAG+KV
Sbjct: 172 KDGELFEGGKAQDFPFVIGAGSMLKDFESAVGGLKVGETKTFEMTFPEDYHAADLAGQKV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K V +P+ V+ DLA LG + +R +++ + ++ KVK Q++
Sbjct: 232 EFEITVKGVEAPILPAVDADLARALGVADGDVTKLRDEVRANLEREVKRRIQGKVKEQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +VP++LVE E + + + ++ ++++ A RRV
Sbjct: 292 EALLVANPIEVPKALVEAESRQLAENAKRDLEMRGMNTKDIPVEPTWFAD----QAVRRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + + E++++ + + + +++ + P L + A + E
Sbjct: 348 KLGLIMAELVNAKELYAKPEQVRAMIDEMAQSY-EDPAELVRWYYAQPERLGQAEAVVIE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
D V+ +L Q D+ VTFD+L N++
Sbjct: 407 DNVVAWVLSQTQTEDKTVTFDELMGNAA 434
>gi|260776383|ref|ZP_05885278.1| cell division trigger factor [Vibrio coralliilyticus ATCC BAA-450]
gi|260607606|gb|EEX33871.1| cell division trigger factor [Vibrio coralliilyticus ATCC BAA-450]
Length = 434
Score = 248 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 89/450 (19%), Positives = 216/450 (48%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVPL + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E + DL ++++
Sbjct: 61 AVRQDVMGEVMQRHFIEAIVKEKINPAGAPTFAPVES---------KEGEDLVFNATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + +++ + + K + ++ +E G + T+D+ S
Sbjct: 112 YPEVELKGLENITVEKPTTEVQDADVEEMIETLRKQQATWAEVDSAAEEGTRATIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + +I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGITGKTAGMEFDIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + +++ + V+ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPEINDEFVSKFGVAEGGVDALKAEVRKNMERELKQAVKNRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N+ DVP +L++ E + Q+ N ++ ++ + + AKRRV
Sbjct: 292 DGLVNENEIDVPAALIDQEIGTLRQQAAQRFGG------NPEAAEQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ +E++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADDEKVKALIEEMATAY-EDPSEVIAYYEQNTQMMDNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ID I+ Q+ +++V+F++L + +
Sbjct: 405 EQAIDAIIAKAQVSEKEVSFNELMNQQQPA 434
>gi|120554759|ref|YP_959110.1| trigger factor [Marinobacter aquaeolei VT8]
gi|166229899|sp|A1U1Q4|TIG_MARAV RecName: Full=Trigger factor; Short=TF
gi|120324608|gb|ABM18923.1| trigger factor [Marinobacter aquaeolei VT8]
Length = 434
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 104/445 (23%), Positives = 217/445 (48%), Gaps = 19/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + ++R + + +P+ + + +R+++ + GFRPGKVP+S +K +G
Sbjct: 1 MQVSVETTSNIERRMTIGVPAQEIDQAVQKRLQETARTVRLNGFRPGKVPMSVVKRRFGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI E + E +++ + L ++D A P + E DL+ ++++
Sbjct: 61 SIRQEVVGEAMRDNYIKALQEQDINPAGWPKLEPKTM---------EEGKDLEFVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+IE+ + V + + EV +K+ID + + + + + +S+ D VT+D+ S
Sbjct: 112 LPEIELGDLSKINVEKPVSEVADKDIDNMIDNLRRQQATMKEVKRKSKNKDIVTIDFKGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S + + +GS + + +VG K G++ EI+ FPED+ +DLAGK
Sbjct: 172 IDGEEFEGGSAEGHRLTLGSGQMIPGFEKGIVGGKAGEELEIDVTFPEDYHNEDLAGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +I +V P ++ + R G E E A R + +++ + V KVK ++
Sbjct: 232 KFAITIHKVEEPQLPELDQEFFKRFGIEAEDEVAFREEVKKNMERELKQAVSNKVKNDVV 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP +LV+ E + + Q + + + AKRRV
Sbjct: 292 DGLLETTELEVPAALVDQEIDRLRQDAVQRFGGQ-------VDFQQLPKEIFEEQAKRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
TG++ + +KN+++ E +++ + + + +++ HF P+ A++ + + E
Sbjct: 345 KTGLLFQEVVKKNDLKADEAKVEEKIQEIASTY-EQPDEVVAHFNSNPDQKAQVESSVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
D V+D +L + ++ ++K+ +++
Sbjct: 404 DAVVDFVLGAAKVKEKKMKYEEAVQ 428
>gi|329908482|ref|ZP_08274872.1| Cell division trigger factor [Oxalobacteraceae bacterium IMCC9480]
gi|327546709|gb|EGF31660.1| Cell division trigger factor [Oxalobacteraceae bacterium IMCC9480]
Length = 450
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 102/461 (22%), Positives = 209/461 (45%), Gaps = 24/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E L+R + + +P + +R++ A GFRPGKVP+ + + +G
Sbjct: 1 MATAVETLEKLERRITITVPLADVQAEVEKRLKVRAKSAKAPGFRPGKVPMKMVAAQFGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E +++ + + ++ R A P I D G I +++I
Sbjct: 61 QVETEVLNDKVGRAFNDAANENSLRVAGYPRIEPKAAGEDAVEGTI------VFEATFEI 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++ + +V + + EV E EID+ +A + K F VK +
Sbjct: 115 YPEVIVGDLSVTEVEKTVTEVTEAEIDKTIAILRKQRAHFHVKGEQDAHGDGGPDQTAQK 174
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
++VTVD+T +D V + F++G + E + GLK G+ K FP D
Sbjct: 175 DNRVTVDFTGMIDGVEFPGGKADDYAFVLGEGRMLPEFEAAITGLKVGESKSFPLAFPAD 234
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEF 287
+ KD+AGK ++K++ V+ + A+ LG E MR +++
Sbjct: 235 YHGKDVAGKTAEFTITLKKLEWAHMPEVDAEFAITLGVEDGDIGKMRADIKLNLEREVGG 294
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ K K ++D + DVP +LVE + +++ R +M +++ E
Sbjct: 295 RTKAKTKDSVMDALIKSAQLDVPNALVEQDVERLVEMTRKDMQQRGMDVKSMPFPPELFT 354
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
A+RRV G++L + + N+++ T +++++ + + ++++ ++ N
Sbjct: 355 A----QAERRVRLGLILAEVVKTNSLQATADQVKAQVEDFAKSY-EDPQQVMQYYFSDRN 409
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E+ V++++L ++ ++ V FD+L N++++
Sbjct: 410 RLAEVEALVLEENVVNYVLGKSKVTEKSVAFDELMGNNAQA 450
>gi|59711402|ref|YP_204178.1| trigger factor [Vibrio fischeri ES114]
gi|67461598|sp|Q5E6Q6|TIG_VIBF1 RecName: Full=Trigger factor; Short=TF
gi|59479503|gb|AAW85290.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Vibrio
fischeri ES114]
Length = 432
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 88/448 (19%), Positives = 206/448 (45%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L + +P+ + D+ + + +I GFR GKVP+ + +YG+
Sbjct: 1 MQVTVETKEGLERVLTITVPAANIEDAVSAELRNIAKNRRFDGFRKGKVPMKMVAKMYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ ++ + E+++ E + K A P+ T E DL S+++
Sbjct: 61 AVRNDVMGEVMQRHFIEAIVKEKINPAGAPTFTPVE---------FAEGKDLVFTASFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + D + V + EV ++++ + + K + + +E G + T+++ S
Sbjct: 112 YPEVALQGLDKVVVEKPQVEVKDEDVAEMLETLRKQQSTWADADIAAEDGTRATINFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G + + + G K G++ I+ FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGQGRMIPGFEDGIKGKKAGEELTIDVNFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + +V S +N++ + G E ++ + +++ V+ K+K Q ++
Sbjct: 232 QFAIKVVKVESRELPELNDEFVAKFGAEGGVEGLKAEVRKNMERELAQAVKNKIKEQAIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + DVP +L++ E + Q+ N D+ E + + AKRRV+
Sbjct: 292 GLVEQNNIDVPSALIDQEVQVLRQQAVQRFGG------NADTAPELPRELFEEQAKRRVV 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++LG + + ++ +E++++ + + + +++ +++ + +R E+
Sbjct: 346 VGLLLGEVIKSEELKADDEKVKALINEMASAY-EDPTEVVAYYEGNEQMMNNMRNVALEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ IL Q+ ++ F++L +
Sbjct: 405 QAVEAILAKAQVSEKAFGFNELMNQQPA 432
>gi|146277392|ref|YP_001167551.1| trigger factor [Rhodobacter sphaeroides ATCC 17025]
gi|166229925|sp|A4WS82|TIG_RHOS5 RecName: Full=Trigger factor; Short=TF
gi|145555633|gb|ABP70246.1| trigger factor [Rhodobacter sphaeroides ATCC 17025]
Length = 444
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 123/452 (27%), Positives = 227/452 (50%), Gaps = 11/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E EGLKR + + + L E++ + + +KGFR GKVPL+ ++ +G
Sbjct: 1 MQVTETLKEGLKRAYTITVTAAELDAKVQEKLVEAQPDIEMKGFRKGKVPLAMLRKQFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L + + + I + + L +R AM+P + + +G + D+ + + Y+
Sbjct: 61 RLLGDAMQDAIDGAMRDHLETSGDRPAMQPEVRMVDG------ETWQEGTDVVVEMKYEA 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP+I + + + + + DE +D + +A++ F+ + +++ GD++ +D+
Sbjct: 115 LPEIPEIETSKVTLERLVVKADEAAVDEALKNLAESAQNFDDRRKGSKAKDGDQIVIDFK 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + E S ++ ++GS E LVG K D+ ++ FP ++ K LAGK
Sbjct: 175 GSVDGELFEGGSAEDYPLVLGSGSFIPGFEEQLVGAKVEDEVTVKVTFPTEYGAKHLAGK 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V +P P ++++LA + G E +A++ +++++ + R +KR +L
Sbjct: 235 EAEFACTVKAVKAPKPAEIDDELAKKYGAEDLAALKAQIAERLEAEYKGASRAVLKRALL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +F++P LVE E + I ++ E + E + LA+RRV
Sbjct: 295 DQLDTMVSFELPSKLVEAEAHQIAHQLWHEEHPE---EHGHNHGTIEPTDEHKALAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG K + VT+ EM A+ Q ++PG E+ + QK P +LRAPIFE
Sbjct: 352 RLGLLLAEIGRKAEVTVTDAEMTQAVLAQARQYPGQERAYFEFVQKNPQIQQQLRAPIFE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D IL+ + +++V D L
Sbjct: 412 DKVVDLILEGATVTEKEVGKDDLQKAIEALDE 443
>gi|78066694|ref|YP_369463.1| trigger factor [Burkholderia sp. 383]
gi|119370884|sp|Q39FE7|TIG_BURS3 RecName: Full=Trigger factor; Short=TF
gi|77967439|gb|ABB08819.1| Trigger factor [Burkholderia sp. 383]
Length = 448
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 100/461 (21%), Positives = 215/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVP+ + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDTVQKEIDARIQKLAKTVRMPGFRPGKVPVKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + +++ ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFEPKQEQAEGA---------YAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V F + E
Sbjct: 112 YPEVKIGDLATAEVERSTTSIGDAEIDRTLDILRKQRVHFHARGEAGEHGDGGADTAAKN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + + ++ F++G + E +GLK G+ + + FPED
Sbjct: 172 GDRVTVDFVGKIDDVAFQGGTAEDFPFVLGEGRMLPEFETAALGLKVGESRTFDLAFPED 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K++ P ++ + A LG E MRG +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKIEWPHLPEIDGEFAKSLGIEDGDLTKMRGEIKDNLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFTEQAERRVKLGLVLAELVKSNGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 448
>gi|103486333|ref|YP_615894.1| trigger factor [Sphingopyxis alaskensis RB2256]
gi|98976410|gb|ABF52561.1| trigger factor [Sphingopyxis alaskensis RB2256]
Length = 544
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 135/459 (29%), Positives = 254/459 (55%), Gaps = 17/459 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ +E +EGLKRE V I + + +E ++ I + GFRPGKVP + I+ ++G
Sbjct: 9 MKTVETLNEGLKREYRVTITAKDIDARVDEEVKSIAPTVRMPGFRPGKVPPNLIRKMHGA 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ ++ +++ I V ++++K R A++P++T+ + E D +L ++ ++
Sbjct: 69 ALSADALNKAIDAGVRDLMAKEKLRPALQPAVTL--------ADGYEAGKDAELTVALEV 120
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
LP+IE S D L++ + D+K + ++ E A FE K ++ GD+V +D+
Sbjct: 121 LPEIETPSIDGLKLERLTVPADDKAVMAKIEEFAAQMKRFEEAPKTRKAATGDQVIIDFA 180
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + + +++ +GS L + LVG+K GD+K ++ FPED+ ++ L GK
Sbjct: 181 GSVDGTPFDGGTGEDMAVEIGSGQLIPGFEDQLVGVKAGDEKTLKVTFPEDYPVETLKGK 240
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++KEV P ++++ A LG ES ++ L +++Q L R +KR++L
Sbjct: 241 LAEFAVTVKEVKVPAATKIDDEFAKSLGLESLDKLKELMKDQVEQELNGLTRTHMKRKLL 300
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + F+VP ++VE E+N I Q++ E S + + E D + Y +A RRV
Sbjct: 301 DQLAAAHDFEVPPTMVEAEFNQIWQQLEHEASHEEDP-EAAKAELENDREEYRAIAVRRV 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELRAPIF 417
G++L IG+ + ++V+++EMQ + Q ++ P ++ +++ Q+ A A+LRAP++
Sbjct: 360 RLGLLLSEIGQAHGVQVSQQEMQRLIMQAAQQYRPEDRQRFVEYVQQDALAAAQLRAPLY 419
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDK 456
EDKV+D + + +I DR+ T ++L E++ E D
Sbjct: 420 EDKVVDFLFEKAEITDRETTREEL-----EAAIEADDDS 453
>gi|90579279|ref|ZP_01235089.1| trigger factor [Vibrio angustum S14]
gi|90440112|gb|EAS65293.1| trigger factor [Vibrio angustum S14]
Length = 432
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 88/448 (19%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL+R+L + +P+ + D+ ++ I GFRPGK P+ + ++G
Sbjct: 1 MQVTVETTEGLERQLTITVPAANIEDAVTAELKKIAKTRRFDGFRPGKAPIKMVAKMFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E++ E + K A P+ T E + DL + ++++
Sbjct: 61 SVRQDILGEVMHRHFIEAIVKEKINPAGAPTFTPVE---------VAEGKDLVFKATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I + D + V + + EV E ++D + + K + + ++ +VT+D+ +
Sbjct: 112 FPEIALQGLDKVVVEKPVVEVTEADVDTMLDTLRKQQATWTEVDAAADANSRVTIDFVGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + E +VG K G++ +E FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKAEGFALAMGQGRMIPGFEEGVVGKKAGEEFTVEVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +V + + + + G E ++ + +++ + V+ ++K Q+L
Sbjct: 232 VFAIKLHKVEAQELPELTEEFVAKFGVEDGSVDGLKAEVRKNMERELKQAVKGRIKDQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + VP +L++ E + Q+ + ++ E + + AKRRV
Sbjct: 292 NGLVEQNDITVPAALIDQEIEALRQQAAQRFGG------DAKNMPELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++G + + ++ EE +++ + + + +++ +++ + +R E
Sbjct: 346 VVGLLVGEVIKSEELKADEERVKAIIAEMASAY-EDPSEVVKYYETNEQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ID +L Q+ D+ V+F++L + ++
Sbjct: 405 EQAIDALLAKAQVSDKDVSFNELMNPAA 432
>gi|259418907|ref|ZP_05742824.1| trigger factor [Silicibacter sp. TrichCH4B]
gi|259345129|gb|EEW56983.1| trigger factor [Silicibacter sp. TrichCH4B]
Length = 444
Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 132/453 (29%), Positives = 239/453 (52%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + IP+ L + N ++ + + + +KGFR GKVP+ +K +G
Sbjct: 2 MQVTETLNEGLKRGYAITIPATELEEKVNAKLAEAQPEIEMKGFRKGKVPMPLLKKQFGP 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E + + + + +R A++P + + + + D+ + +SY+
Sbjct: 62 RLMGEVMQEAVDGAMNKHFEESGDRPALQPDVKMT-------NEDWKEGDDVNVEMSYEA 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I +++ + I + ++ + + +A + FE +E SE GD+V +D+
Sbjct: 115 LPAIPEVDVSGVELEKLIVKAEDAAVTEALENLASSAQEFEAREEGAVSEDGDQVVIDFV 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E S ++ +GS E LVG+K+G++K++ FPE++ + LAGK
Sbjct: 175 GKVDGEAFEGGSAEDYPLTLGSNSFIPGFEEQLVGVKSGEEKDVTVTFPEEYGAEHLAGK 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++KEV +P +N++LA + G E ++G S++++ RQ +KR L
Sbjct: 235 EAVFSCTVKEVKAPKAAEINDELAKKFGAEDLDQLKGQISERLEAEYAGAARQVMKRAAL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ +FD+P SLVE E I ++ E N Q D + E ++ LA+RRV
Sbjct: 295 DALAELVSFDLPPSLVEAEAKQIAHQLWHE---ENPDVQGHDHPEIEPTDEHNKLAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K +EVT++EM A+ QQ ++PG E++ + Q+ +LRAPIFE
Sbjct: 352 RLGLLLAEMGQKAEVEVTDQEMTQAIMQQARQYPGQERQFFEFIQQNAQMQQQLRAPIFE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKVID + ++ +++V+ + L E
Sbjct: 412 DKVIDLVFDQAKVSEKEVSKEDLQKAVEALEEE 444
>gi|304311289|ref|YP_003810887.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[gamma proteobacterium HdN1]
gi|301797022|emb|CBL45235.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[gamma proteobacterium HdN1]
Length = 448
Score = 247 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 88/446 (19%), Positives = 205/446 (45%), Gaps = 16/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + L+R + + +P+ + +F ++++D S+A I GFRPGKVP+ ++ Y +
Sbjct: 1 MQVSVESVSTLERRVTISVPAAEVDVAFEKKLKDTASRARIDGFRPGKVPMKEVRRRYAR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI E + ++I + ++K A P I + E D++ ++++
Sbjct: 61 SIREEILGDVINNSFYQAITKEKLNLAGNPHIEFTK---------DEPGQDVEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I+I + +++ V + + E+ + +ID + ++ + F E + GD++T+D++ S
Sbjct: 112 YPEIQIKNLENIVVEKPVSEIADADIDAMLEKLRQQRAIFVKTEEPAADGDQITIDFSGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E + + ++GS + + L+G G+ + I FPE + ++L GK
Sbjct: 172 IDGVAFEGGAAEGHALVLGSKSMIPGFEDALIGASAGEDRTINVTFPEAYHSEELKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V V+++ G A R + +++ + ++ KVK Q+
Sbjct: 232 QFAVKVHKVERKQLAEVDDEFIKHFGVTEGGVDAFRAEIRKNMERELKNAIKNKVKNQVF 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +VP++LV E + + +++ + E + A V
Sbjct: 292 EGLLKHNELEVPKALVSQETDRMRKQMLQQFGGQGANLDISMLPAELFTE----RATHSV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + + V E ++ + + F ++++D + +L A + E
Sbjct: 348 KLGLLLSEFMRTSELSVDAERVRKTIEELAEPF-EQPQEVIDWYNSNDQQRRQLEAAVLE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
D+ ++ +L++ Q+ ++ +++
Sbjct: 407 DQAVEKLLETAQVSEKVCSYEDAIKP 432
>gi|303253016|ref|ZP_07339170.1| trigger factor [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|307248549|ref|ZP_07530565.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|302648148|gb|EFL78350.1| trigger factor [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|306854944|gb|EFM87131.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
Length = 433
Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 78/448 (17%), Positives = 209/448 (46%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EGL+R + + + ++++ ++ E+++ A + GFR GKVP + I+ +G
Sbjct: 1 MSISIETLEGLQRRVTITVAADKIEAAYKEQLKGYAKNARVDGFRKGKVPHAIIEQRFGL 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + + ++ + + A RP+ T N + + ++++
Sbjct: 61 AARQDVLSDEMQRAFFDAVIAEKINLAGRPTFTPN---------NYQPGQEFSFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K + + ++ D+V +D+ S
Sbjct: 112 FPEVELKGLENIEVEKPVVEITEADLDKMIDVLRKQQATWAESQAAAQAEDRVVIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFSLAMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K+V + + + + + ++ +R + +++ + V +VK Q+++
Sbjct: 232 KFAITLKKVENIVLPELTEEFVKKFGAAKTVEELRAEIKKNMQRELKNAVTARVKNQVIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + +VP + V E + + + + + + + + AKRRV
Sbjct: 292 GLIAQNDIEVPAAAVAEEVDVLRHQAVQRFGGKPEMAAQL------PAELFEADAKRRVQ 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L T+ N ++V E+ ++ + + + +++ H+ K +R + E+
Sbjct: 346 VGLLLSTVIGTNELKVDEKRVEETIAEIASAY-EQPAEVVAHYAKNRQLTENIRNVVLEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +L ++ ++ +FD++ ++
Sbjct: 405 QAVEVVLAKAKVTEKAASFDEVMAQQAQ 432
>gi|330446594|ref|ZP_08310246.1| trigger factor [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490785|dbj|GAA04743.1| trigger factor [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 432
Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 208/448 (46%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +EGL+R+L + +P+ + D+ ++ I GFRPGK PL + ++G
Sbjct: 1 MQVTVETTEGLERQLTITVPAANIEDAVTAELKKIAKTRRFDGFRPGKAPLKMVAKMFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E++ E + K A P+ T E I DL + ++++
Sbjct: 61 SVRQDILGEVMHRHFIEAIVKEKINPAGAPTFTPVE---------IAEGKDLVFKATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I + D + V + + EV E ++D + + K + E ++ +VT+D+ +
Sbjct: 112 FPEIALQGLDKVVVEKPVVEVTEADVDTMLETLRKQQATWAEVEAAADANSRVTIDFVGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + + +VG K GD+ +E FPE++ ++L GK
Sbjct: 172 IDGEEFEGGKAEGFALAMGQGRMIPGFEDGIVGKKAGDEFTVEVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +V + + + + G E ++ + +++ + V+ ++K Q+L
Sbjct: 232 AFAIKLHKVEAQELPELTEEFVAKFGVEDGSVEGLKAEVRKNMERELKQAVKGRIKDQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + VP +L++ E + Q+ + ++ E + + AKRRV
Sbjct: 292 NGLVEQNDITVPAALIDQEIEALRQQAAQRFGG------DAKNMPELPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+++G + + ++ EE +++ + + + +++ +++ + +R E
Sbjct: 346 VVGLLVGEVIKSEELKADEERVKAIIAEMASAY-EDPSEVVKYYETNEQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ID +L Q+ D+ V+F++L + ++
Sbjct: 405 EQAIDALLAKAQVSDKAVSFNELMNPAA 432
>gi|33592841|ref|NP_880485.1| trigger factor [Bordetella pertussis Tohama I]
gi|41018187|sp|Q7VXI8|TIG_BORPE RecName: Full=Trigger factor; Short=TF
gi|33572489|emb|CAE42061.1| trigger factor [Bordetella pertussis Tohama I]
gi|332382254|gb|AEE67101.1| trigger factor [Bordetella pertussis CS]
Length = 436
Score = 247 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 93/446 (20%), Positives = 206/446 (46%), Gaps = 15/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + GL+R +D+ + + +++ + A + GFRPGK PL+ ++ +G
Sbjct: 1 MQPVVETLSGLERRVDLAVSVAEVEKEVQAQLKRVGRTAKVAGFRPGKAPLAMLERSHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + I+ ++ + + R A P++T L ++++
Sbjct: 61 GIRYDVINSLVGRAFEQAVDGAKLRVAGSPTLTPKTEGV--------AEDTLAFTATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYTV 179
P++ + L VT+ V + E+++ + + K FE + S+ GD+V +D+
Sbjct: 113 YPEVTVPDLSALAVTRYDTPVTDAEVNQTLDVLRKQRAKFEIREGRASQDGDRVVLDFAG 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D V E ++ F++G + E E +GLK G+ K FP+D+ K++AGK
Sbjct: 173 TIDGVPFEGGKAEDFPFVLGQGRMLPEFEEAALGLKAGESKVFPLKFPDDYQGKEVAGKT 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KEV + V+ + A ++ I++ + ++ + K +
Sbjct: 233 AEFTITVKEVAEGVLPEVDAEFAKSLGQAEGDVEKLKADIRTNIEREVKARLQGRTKGSV 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D + FDVP++LV+++ G + R E+ + + + + ++RR
Sbjct: 293 MDALVEAGKFDVPKALVDSDVEGRIAAAREELKQRGVPNADSV---PMPAEVFSTESERR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+++ + ++ ++ E++++ + + + +++ ++ AE+ A +
Sbjct: 350 VRLGLLVSELVKQAQLQAKPEQVRARIEEFAQNY-EQPAQVVSYYLADRQRRAEIEAIVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFD 443
ED V+ H+L++ ++ D KV FDQL
Sbjct: 409 EDNVVAHVLENAKVADEKVPFDQLMG 434
>gi|307261988|ref|ZP_07543644.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|306868319|gb|EFN00140.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
Length = 433
Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats.
Identities = 78/448 (17%), Positives = 210/448 (46%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EGL+R + + + ++++ ++ E+++ A + GFR GKVP + I+ +G
Sbjct: 1 MSISIETLEGLQRRVTITVAADKIEAAYKEQLKGYAKNARVDGFRKGKVPHAIIEQRFGL 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + + ++ + + A RP+ T N + + ++++
Sbjct: 61 AARQDVLSDEMQRAFFDAVIAEKINLAGRPTFTPN---------NYQPGQEFSFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K + + ++ D+V +D+ S
Sbjct: 112 FPEVELKGLENIEVEKPVVEITEADLDKMIDVLRKQQATWAESQAAAQAEDRVVIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E ++ +G + E +VG K G+Q +I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDLTLAMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K+V + + + + + ++ +R + +++ + V +VK Q+++
Sbjct: 232 KFAITLKKVENIVLPELTEEFVKKFGAAKTVEELRAEIKKNMQRELKNAVTARVKNQVIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + +VP + V E + + + + + + + + AKRRV
Sbjct: 292 GLIAQNDIEVPAAAVAEEVDVLRHQAVQRFGGKPEMAAQL------PAELFEADAKRRVQ 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L T+ N ++V E+ ++ + + + +++ H+ K +R + E+
Sbjct: 346 VGLLLSTVIGTNELKVDEKRVEETIAEIASAY-EQPAEVVAHYAKNRQLTENIRNVVLEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +L ++ ++ +FD++ ++
Sbjct: 405 QAVEVVLAKAKVTEKAASFDEVMAQQAQ 432
>gi|160898085|ref|YP_001563667.1| trigger factor [Delftia acidovorans SPH-1]
gi|238687211|sp|A9C1U7|TIG_DELAS RecName: Full=Trigger factor; Short=TF
gi|160363669|gb|ABX35282.1| trigger factor [Delftia acidovorans SPH-1]
Length = 436
Score = 246 bits (628), Expect = 4e-63, Method: Composition-based stats.
Identities = 101/449 (22%), Positives = 211/449 (46%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P N + R++ + + GFRPGKVP+S + YG
Sbjct: 1 MAVTVETLEKLERKITLSLPLNSIQSEVENRLKQVARTVKMDGFRPGKVPMSVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + E + +++ R A +P I+ EG + + + +++
Sbjct: 61 SVQYEVLNDKVGEAFAQAVNEAKLRVAGQPRISEKEGAPE---------GEAQFEAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
+P+++I +V + EVD+ ID+ + + K F + GD+VTVD+
Sbjct: 112 MPEVKIGDLTSAEVEKLTAEVDDAAIDKTVDILRKQRRTFAQRAQADVAVDGDRVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D ++ QF+VG + E + + G+K G+ K FP D+ KD+AGK
Sbjct: 172 GKIDGETFSGGKAEDFQFLVGEGQMLKEFEDAVRGMKAGESKTFPLAFPADYHGKDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K++ + V+ A LG + +R + +++ +F V+ + K+
Sbjct: 232 TADFLVTVKKIEAANLPEVDEAFAKALGVAEGTVEGLRADIKKNLEREVKFRVQGRNKQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + +K ++P++ V+ E +L+ R E+ K E + A+R
Sbjct: 292 VMDALVSKAELELPKASVQAEVARLLEGARAELQQRGIKDAEKA---EIPEDVFLPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + N + T +++++ + + + + + + LAE+ A +
Sbjct: 349 RVRLGLVVAELVRANELHATPDQIKAHVEELAASY-EKPEDVARWYFGDRQRLAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V + +L ++ D+ V+FD+L +
Sbjct: 408 IENNVTEFVLGKAKVSDKAVSFDELMGQA 436
>gi|71277800|ref|YP_270453.1| trigger factor [Colwellia psychrerythraea 34H]
gi|119370890|sp|Q47XL7|TIG_COLP3 RecName: Full=Trigger factor; Short=TF
gi|71143540|gb|AAZ24013.1| trigger factor [Colwellia psychrerythraea 34H]
Length = 435
Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats.
Identities = 95/449 (21%), Positives = 214/449 (47%), Gaps = 16/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ ++ R+ I I GFRPGKVP S ++ +GK
Sbjct: 1 MQVSVETTQGLERRLTISVPAEKVDVEVKNRLRQISKTQRINGFRPGKVPPSVVQKRFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E EI++ + + A RPS E L+ +++I
Sbjct: 61 SVRQEVAGEIMQRNFVDAIVAEKINPAGRPSFVAKSN---------EDGKALEFEATFEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +E+ + + + + +V + ++D + K + ++ + +++ GDK+T+D+T
Sbjct: 112 YPVVELKDLEKIAIERPEVDVTDADLDEMFVTLQKQHQTWKENKRKTKSGDKLTLDFTGR 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + +G+ + + + G+K GD+ I+ FPED+ ++L GK
Sbjct: 172 VDGEEFEGGKAEGFELELGAGRMIPGFEKEVTGMKAGDEATIKVTFPEDYHAENLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ I + P+ ++ + A G E A+R S+ + + V+ KVK Q++
Sbjct: 232 EFDIVIHKTEGPILPEIDEEFAKLFGIEEGGVEALRVEVSKNMARELTQAVKAKVKTQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + D+P +LV E + + Q+ + ++ + + + A+RRV
Sbjct: 292 DGLLAGHEVDLPSALVTQEVDVLRQQAMQRFQGQ----MDPKNLPQLPAEMFTEQAERRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++V E ++ + K++++++ + +++ E
Sbjct: 348 KIGLLLGEVIKVNELKVDETKVNELIAS-AASAYEDPKEVIEYYANNNELMQQMQNVALE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ ++ +++ ++ D+K +F+++ + ++
Sbjct: 407 EQAVELLVEKAKVSDKKASFNEIMNPEAK 435
>gi|161524521|ref|YP_001579533.1| trigger factor [Burkholderia multivorans ATCC 17616]
gi|189350723|ref|YP_001946351.1| trigger factor [Burkholderia multivorans ATCC 17616]
gi|221215055|ref|ZP_03588022.1| trigger factor [Burkholderia multivorans CGD1]
gi|238687052|sp|A9AJQ9|TIG_BURM1 RecName: Full=Trigger factor; Short=TF
gi|160341950|gb|ABX15036.1| trigger factor [Burkholderia multivorans ATCC 17616]
gi|189334745|dbj|BAG43815.1| trigger factor [Burkholderia multivorans ATCC 17616]
gi|221164991|gb|EED97470.1| trigger factor [Burkholderia multivorans CGD1]
Length = 448
Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats.
Identities = 103/461 (22%), Positives = 214/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKETVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + +SD ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFAPKQEQSD---------DAYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V F + E
Sbjct: 112 YPEVKIGDLSTAEVERSTTTIGDAEIDRTLDILRKQRVHFHARGEAGEHGDGGADTAAQN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + ++ F++G + E + +GLK G+ + E FP+D
Sbjct: 172 GDRVTVDFVGKIDDVAFPGGTAEDFPFVLGEGRMLPEFEQAALGLKAGESRTFELKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ + A LG E MR + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKVEWPHLPEIDAEFAKSLGIEDGDLAKMRNEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQAIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 448
>gi|254247968|ref|ZP_04941289.1| Trigger factor [Burkholderia cenocepacia PC184]
gi|124872744|gb|EAY64460.1| Trigger factor [Burkholderia cenocepacia PC184]
Length = 474
Score = 246 bits (627), Expect = 5e-63, Method: Composition-based stats.
Identities = 98/461 (21%), Positives = 216/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 27 MANVVENLGKLERRVTISLPKDTVQKEIDARIQKLAKTVRMPGFRPGKVPLKMVAQQYAG 86
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + + + R A +PS + +++ ++++
Sbjct: 87 QVEAEVLSDKIGQEFFTVSRAENLRVAGQPSFEPKQEQAE---------DAYAFDATFEV 137
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V + + E
Sbjct: 138 YPEVKIGDLATAEVERSTTSIGDAEIDRTLDILRKQRVHYHARGEAGEHGDGGEDTAAKN 197
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + + ++ F++G + E +GLK G+Q+ + FP+D
Sbjct: 198 GDRVTVDFVGKIDDVAFQGGTAEDFPFVLGEGRMLPEFETAALGLKVGEQRTFDLKFPDD 257
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K++ P ++ + A LG E MR + +++ ++
Sbjct: 258 YHGKDVAGKTAQFTVTMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKENLEREAKR 317
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 318 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 374
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 375 EMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 433
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 434 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 474
>gi|332528102|ref|ZP_08404133.1| trigger factor [Rubrivivax benzoatilyticus JA2]
gi|332112673|gb|EGJ12466.1| trigger factor [Rubrivivax benzoatilyticus JA2]
Length = 436
Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 94/449 (20%), Positives = 207/449 (46%), Gaps = 17/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R + + +P+ + R+ + GFRPGKVP+S + YG
Sbjct: 1 MAVNVETLEKLERRITLTLPATVINSEVEARLRKLARTVKADGFRPGKVPMSVVAQRYGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++ + + + ++ R A P IT E ++ ++ ++++
Sbjct: 61 SVQYEVVNDRVGQAFADATAEAQLRVAGAPRITQKEESAE---------GEIAFEATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
P++++ +++V + +V ++ IDR + + K F + GD+VT+D+
Sbjct: 112 YPEVKLGDLAEIEVERVAADVTDEAIDRTIEILRKQRRTFAQRPAAEGATEGDRVTIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + QFI+G + + + + G+K G+ K FP D+ +D+AGK
Sbjct: 172 GKIDGEPFAGGKAEGFQFIIGEGQMLEQFDKAVRGMKVGENKTFPLQFPADYHGQDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ + V+++ A LG + A+R + +++ +F VR + K
Sbjct: 232 EADFLVTMTKCEVQNLPTVDDEFAKSLGIAEGTIDALRADVKKNLEREVKFRVRSRNKAA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+D ++ ++P +LV NE ++ R ++ K I E + + A+R
Sbjct: 292 AMDALAKAAELELPNALVANELQRLVAGARADLKQRGVKDAENAPIPE---EIFRPQAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + + NN++ ++++ + + + +++ + +AE+ A +
Sbjct: 349 RVRLGLVVAELVKANNLQAQPNQLRAHIEELAQSY-EKPAEVVRWYLGDRQRMAEVEAVV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V + IL ++ D+ + FD+L +
Sbjct: 408 IENNVTEFILAKAKVTDKVLPFDELMSAA 436
>gi|33151846|ref|NP_873199.1| trigger factor [Haemophilus ducreyi 35000HP]
gi|41018185|sp|Q7VN98|TIG_HAEDU RecName: Full=Trigger factor; Short=TF
gi|33148067|gb|AAP95588.1| trigger factor [Haemophilus ducreyi 35000HP]
Length = 433
Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 81/448 (18%), Positives = 206/448 (45%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EGL+R + + + +N++ ++ E+++D A++ GFR GKVP S I+ +G
Sbjct: 1 MSISIETLEGLQRRVTLTVNANKIEAAYKEQLKDYAKNAHVDGFRKGKVPRSIIEQRFGL 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E ++ + + A RP+ T N + D ++++
Sbjct: 61 AARQEVLSEEMQRTFFDAVISEKINLAGRPTFTPNNYQL---------GQDFSFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ +ID+ + + K + + + D+V +D+
Sbjct: 112 FPEVELKGLENIEVEKPVVEITTADIDKMIEVLRKQQATWAESDAAATANDRVIIDFVGY 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +G + E +VG K G+Q +I+ FPE++ ++L GK
Sbjct: 172 IDGAEFEGGKATEFTLNMGQGSMIPGFEEGIVGHKAGEQFDIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++ +V + + + + + ++ +R + +++ + V ++K Q+++
Sbjct: 232 KFAITLNKVENMILPELTEEFVKKFGTAKTVEELRAEIEKNMQRELKNAVTARIKNQVIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + +VP + + E + ++ + + + + + AKRRV
Sbjct: 292 GLVTQNDIEVPVAAIAEEIEVLRRQAVQRFGGKPEMAAQL------PSELFEADAKRRVQ 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L T+ N I+V E+ +Q + + +++ H+ K +R + E+
Sbjct: 346 VGLLLSTVIASNEIKVDEQRVQQTIADIASAY-EQPAEVIAHYAKNQRLTDNIRNVVLEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +L+ ++ ++ +FD++ ++
Sbjct: 405 QAVEIVLEKAKVTEKTHSFDEIMAQQAQ 432
>gi|119383638|ref|YP_914694.1| trigger factor [Paracoccus denitrificans PD1222]
gi|119373405|gb|ABL68998.1| trigger factor [Paracoccus denitrificans PD1222]
Length = 459
Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 135/445 (30%), Positives = 245/445 (55%), Gaps = 11/445 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + +P+ L + ++++ + + +KGFR GKVP++ +K +G+
Sbjct: 16 MQVKETQNEGLKRGYEFTLPAADLAAQVDAKLKEAQPEVEMKGFRKGKVPMALLKKQFGQ 75
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I+ + + E I + + + L K +R A++P I + + + D+ + ++Y+
Sbjct: 76 RIMGDAMQEAIDKALRDHLEKSGDRPALQPKIEM------VNGETWKEGDDVVVTVAYEA 129
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I + +++ + + E E+++ + +AKN +FE ++ +++ GD++ +D+
Sbjct: 130 LPAIPEADLSGVELERLVVEASEEQVTEALENLAKNAQSFEDRKKGTKAKDGDQIVIDFK 189
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E S ++ ++GS E LVG K GD+ ++E FPED+ LAGK
Sbjct: 190 GMVDGEAFEGGSAEDYPLVLGSKSFIPGFEEQLVGAKAGDEVKVEVKFPEDYGHPALAGK 249
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K V +P ++++LA + G ES A++G ++++ + RQ +KR +L
Sbjct: 250 DAVFETTVKAVKAPKAAEIDDELAKKFGAESLDALKGQIRERLEAEYKGASRQVLKRTLL 309
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + FD+PESLVE E + I ++ E + + E + LA+RRV
Sbjct: 310 DRLDEMVKFDLPESLVEAEAHQIAHQLWHEEHPE---EHGHNHGEIEPTDEHKKLAERRV 366
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG+K I V+++EM A+ +Q +FPG E+ + Q+ P A +LRAPIFE
Sbjct: 367 RLGLLLAEIGQKAEITVSDQEMTQAVLRQARQFPGQERAFFEFIQQNPQAQQQLRAPIFE 426
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
DKV+DHI++ ++ ++ VT D+L
Sbjct: 427 DKVVDHIVEGAKVSEKPVTKDELEK 451
>gi|167586931|ref|ZP_02379319.1| trigger factor [Burkholderia ubonensis Bu]
Length = 448
Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 102/461 (22%), Positives = 216/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDTVRKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + +++ ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFAPKQEQAE---------DAYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V F + E
Sbjct: 112 YPEVKIGDLATAEVERSTTSIGDAEIDRTLDILRKQRVHFHARGEAGEHGDGGADTAAKN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D V + + ++ F++G + E +GLK G+ +E + FP+D
Sbjct: 172 GDRVTVDFVGKIDGVAFQGGTAEDFPFVLGEGRMLPEFETAALGLKAGETREFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K++ P ++ D A LG E MRG + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKIEWPHLPEIDADFAKSLGIEDGDLAKMRGEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQAIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 448
>gi|326795826|ref|YP_004313646.1| Trigger factor [Marinomonas mediterranea MMB-1]
gi|326546590|gb|ADZ91810.1| Trigger factor [Marinomonas mediterranea MMB-1]
Length = 444
Score = 246 bits (627), Expect = 6e-63, Method: Composition-based stats.
Identities = 95/446 (21%), Positives = 212/446 (47%), Gaps = 19/446 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + ++R L + +P+ R+ + + + + GFR GKVP+S +K YG+
Sbjct: 1 MQVSVETTSPIERVLTISVPAARIEEKVSAEVAKTAKTVRLDGFRKGKVPVSVVKKRYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +++I+++ E + + A PSI IE DL+ ++
Sbjct: 61 GIRLEAVEQIMRDAYIEAVQAESIQPAGMPSIEPK---------NIEEGADLEFTAKVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P IE++ L+ + EV + ++D + + K N + V E E++ GD+VT+D+
Sbjct: 112 YPTIELADASKLEAKRVNSEVTDADVDTMLETLRKQNAEWTVVEREAKDGDQVTMDFEGF 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + E + + ++GS + + G+K G+++ IE FPED+ ++L G+
Sbjct: 172 IGDEAFEGGKADDHKLVLGSNTMIPGFEAGVEGIKAGEERTIEVTFPEDYQAENLKGQAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESA---MRGLCSQKIKQHSEFLVRQKVKRQI 297
+ KEV + +N++ A + G E +R + + + ++ K+K +
Sbjct: 232 TFKVTAKEVAEQILPELNDEFAEKFGLGDEPTLDALRAEVRKNMDRELSQAIKAKLKNSL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D + DVP SLV+ E +G+ ++ + + + + + A +R
Sbjct: 292 FDSLLANNELDVPSSLVDQEVDGLREQAARQFGGQGFDASQL------PAELFQDEATKR 345
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
G+++ + ++N + V ++ +++ L + +++++ + LA++++ +
Sbjct: 346 AKLGLLISEVIKQNELSVDDDRVKAFLEDMAQAY-QEPQQVVEFYLNNKEQLAQVQSAVL 404
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFD 443
E++V+D +L+S Q+V+ + ++
Sbjct: 405 EEQVVDKLLESAQVVESTLGYEDAIK 430
>gi|311695077|gb|ADP97950.1| trigger factor [marine bacterium HP15]
Length = 434
Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats.
Identities = 97/445 (21%), Positives = 211/445 (47%), Gaps = 19/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + ++R + + +P+ + + +R+++ + GFRPGKVP+S +K +G
Sbjct: 1 MQVSVETTSNIERRMTIGVPAQEIDQAVQKRLQETARTVRLNGFRPGKVPMSVVKRRFGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E + E++++ + L ++D A P E DL+ +++
Sbjct: 61 SVRQEIVGEVMRDNYIKALQEQDINPAGWPKFEPKTM---------EEGKDLEFVAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+IE+ + V + E+ +K++D + + + + + +S+ D +T+D+
Sbjct: 112 LPEIELGDLSKISVEKLTSEITDKDVDNMIDNLRRQQATMKEVKRKSKNKDVLTIDFKGF 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + + +GS + + +VG K G+ EIE FPED+ +DLAGK
Sbjct: 172 IDGEEFEGGAAEGHRLTLGSGQMIPGFEKAIVGGKAGEDMEIEVTFPEDYHNEDLAGKPA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ I +V P ++ + + G E E+ R + +++ + V KVK ++
Sbjct: 232 KFEIKIHKVEEPQLPELDTEFFKKFGIDAEDEATFREEVKKNMERELKQAVSNKVKNDVV 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + D+P +LV+ E + + Q + + + A+RRV
Sbjct: 292 DGLLETTELDIPAALVDQEIDRLRQDAVQRFGGQ-------IDPQQLPKEIFQEQAERRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
TG++ + +KN+++ ++ + + + ++++ HF P +++ + + E
Sbjct: 345 KTGLLFQEVVKKNDLKADPAKVDEKIQEIASTY-EQPEEVVAHFNSNPEQKSQIESSVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
D V+DH+L+ Q+ ++KV +++
Sbjct: 404 DAVVDHVLEQAQVKEKKVKYEEAVQ 428
>gi|152995748|ref|YP_001340583.1| trigger factor [Marinomonas sp. MWYL1]
gi|189035943|sp|A6VW19|TIG_MARMS RecName: Full=Trigger factor; Short=TF
gi|150836672|gb|ABR70648.1| trigger factor [Marinomonas sp. MWYL1]
Length = 441
Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats.
Identities = 90/447 (20%), Positives = 220/447 (49%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + ++R L + +P+ R+ + N + I GFR GKVP+S +K YG+
Sbjct: 1 MQVSVETTSPIERVLTISVPAARVDEKVNSEVAKTAKTIRIDGFRKGKVPVSVVKKRYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + +++I+++ E + K + A PSI DL+ + ++
Sbjct: 61 GIRLDAVEQIMRDAYVEAIQKESIQPAGMPSIEPK---------NFAEGADLEFVVKIEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ ++ ++V + + +V E ++D + + K N + E ES GD+VT+D+
Sbjct: 112 YPEVTLADNSAIKVDRVVSDVTEADVDTMLETLRKQNAEWSAVERESADGDQVTIDFVGY 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + + + + + ++GS + ++G K G+++ I FPED+ ++L GK+
Sbjct: 172 LGDEAFDGGAAEGHKLVLGSNTMIPGFESGILGAKAGEERTISVTFPEDYQAENLKGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ EV + +N+ + G E + +A+R + +++ ++ K+K +
Sbjct: 232 TFKITVSEVAEQILPELNDAFVEKFGLEEATVAALRAEVRKNMERELNQAIKSKLKNALF 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ +S+ +VP +LV+ E + + ++ + + + + + AK+R
Sbjct: 292 EGLSSINEVEVPSALVDQEVDALRKQAAQQFGGQGFDASQL------PAELFQEEAKKRA 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + +K++++V ++ +++ L + ++++D + K LA++++ + E
Sbjct: 346 KLGLLISEVIKKDDLKVDDDRVRAFLEDMAQAY-QEPQQVIDFYLKNKEQLAQVQSAVLE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++V+D +L+S Q+ + + ++ +
Sbjct: 405 EQVVDKLLESAQVTEVTLGYEDAIKPN 431
>gi|91227734|ref|ZP_01261961.1| trigger factor [Vibrio alginolyticus 12G01]
gi|269965581|ref|ZP_06179695.1| trigger factor [Vibrio alginolyticus 40B]
gi|91188381|gb|EAS74676.1| trigger factor [Vibrio alginolyticus 12G01]
gi|269829806|gb|EEZ84041.1| trigger factor [Vibrio alginolyticus 40B]
Length = 435
Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats.
Identities = 89/451 (19%), Positives = 214/451 (47%), Gaps = 18/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVPL + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E + DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVEN---------KEGSDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + + V + + EV + +++ + + K + E +E G +V++D+ S
Sbjct: 112 YPEVELKGLESITVEKPLTEVKDADVEEMIDTLRKQQATWVEVEEAAEDGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + +I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIAGKTAGMEFDIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + +++ + V+ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVAKFGVVEGGVEALKAEVRKNMERELKQAVKNRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +VP +L+E E + Q+ N ++ + + + AKRRV
Sbjct: 292 DGLVEQNDINVPSALIEQEIQVLRQQAAQRFGG------NPEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ +E++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADDEKVKALIEEMATAY-EDPSEVIAYYEQNEEMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
++ ID I+ Q+ +++V F++L + ++
Sbjct: 405 EQAIDAIIAKAQVSEKEVGFNELLNQQQPAA 435
>gi|83720228|ref|YP_442641.1| trigger factor [Burkholderia thailandensis E264]
gi|167581576|ref|ZP_02374450.1| trigger factor [Burkholderia thailandensis TXDOH]
gi|167619692|ref|ZP_02388323.1| trigger factor [Burkholderia thailandensis Bt4]
gi|257138853|ref|ZP_05587115.1| trigger factor [Burkholderia thailandensis E264]
gi|119370885|sp|Q2SWQ8|TIG_BURTA RecName: Full=Trigger factor; Short=TF
gi|83654053|gb|ABC38116.1| trigger factor [Burkholderia thailandensis E264]
Length = 449
Score = 246 bits (626), Expect = 7e-63, Method: Composition-based stats.
Identities = 102/461 (22%), Positives = 217/461 (47%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDVVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + + ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRSENLRVAGQPSFAPKQDAA--------QEGAYAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P+++I +V + + + EIDR + + K V F + +T ++
Sbjct: 113 YPEVKIGDLATAEVERSTTTIGDAEIDRTLDILRKQRVHFHARGEGGEHGDGGADTSAQN 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D V + + ++ F++G + E +GLKTG+ +E + FP+D
Sbjct: 173 GDRVTVDFVGKIDGVAFQGGTAEDFVFVLGEGRMLPEFETAALGLKTGEAREFDLKFPDD 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ D A LG E MR + + + ++
Sbjct: 233 YHGKDVAGKTAQFTVTMKKVEWPHLPAIDADFAKSLGIEDGDLTKMREEIKENLGREAKR 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ + +
Sbjct: 293 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPV 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 EMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L ++++
Sbjct: 409 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASATAQA 449
>gi|107101232|ref|ZP_01365150.1| hypothetical protein PaerPA_01002265 [Pseudomonas aeruginosa PACS2]
Length = 422
Score = 246 bits (626), Expect = 7e-63, Method: Composition-based stats.
Identities = 96/438 (21%), Positives = 207/438 (47%), Gaps = 19/438 (4%)
Query: 15 LDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEI 74
+ V +P+ R+ N+R++ +A I GFRPGKVP+S I+ Y S E + ++I+E
Sbjct: 1 MTVGVPAERIETEVNKRLQQTARRAKIPGFRPGKVPMSVIRQRYEASARQEAMGDLIQET 60
Query: 75 VPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQV 134
E + ++ A PS+ E DL+ ++++ P+ +S +D++V
Sbjct: 61 FYEAVVEQKLNPAGSPSVEPKS---------FEKGKDLEYIATFEVFPEFTVSGLEDIKV 111
Query: 135 TQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNV 194
+ EV + ++D + + K N FEV E ++ D++ +D+ +D S K
Sbjct: 112 ERLQAEVSDADVDNMLDVLRKQNTRFEVVERAAQNDDQLNIDFVGKIDGEAFAGGSAKGT 171
Query: 195 QFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLP 254
++GS + + E LVG K G+++ + FPED+ DLA K ++ V P
Sbjct: 172 LLVLGSGRMIAGFEEGLVGAKAGEERVLNLTFPEDYQNLDLANKAAEFTVTVNSVAEPKL 231
Query: 255 VVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPES 312
+N + G + R + +++ ++ KVK Q+++ + +VP++
Sbjct: 232 PELNEEFFALFGVKETGLDGFRAEVQKNMERELRQAIKSKVKNQVMEGLLQANPIEVPKA 291
Query: 313 LVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNN 372
L+ NE N + + + D+ + + AKRRV+ G+++ + +++
Sbjct: 292 LIGNEVNRLRVQAVQQFGGN-------IKPDQLPAELFEEQAKRRVVLGLIVAEVVKQHE 344
Query: 373 IEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
++ E ++ + + + ++++ + K L E+R+ + E++V+D +L+ +
Sbjct: 345 LKADEGRVREMIEEMASAY-QEPEQVVAWYFKNEPQLNEVRSVVLEEQVVDTVLQKATVT 403
Query: 433 DRKVTFDQLFDNSSESSP 450
D++V++++ +
Sbjct: 404 DKQVSYEEAVKPAEAPQA 421
>gi|254448840|ref|ZP_05062296.1| trigger factor [gamma proteobacterium HTCC5015]
gi|198261530|gb|EDY85819.1| trigger factor [gamma proteobacterium HTCC5015]
Length = 436
Score = 246 bits (626), Expect = 7e-63, Method: Composition-based stats.
Identities = 98/451 (21%), Positives = 215/451 (47%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + SEGL+R+L V +P+ + + + + I A I GFRPGKVP+S +K Y
Sbjct: 1 MQVSLETSEGLERKLTVEVPAETVAQALENQYQQIARSAKIPGFRPGKVPMSVVKKRYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + +I+ + E L+K + A P+I ++ L +++
Sbjct: 61 EARQDVVSNLIQSTLSEALTKEEVNPAGYPAIE---------KADLDDDDKLTYVAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I+++ ++V + E+ E +ID + + + + E S+ GD+VT+D+
Sbjct: 112 YPEIQLADPSKMKVEKLNSEIGESDIDEMVETLRQQRAEWNDVERASKEGDQVTIDFVGR 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E ++ ++GS + + G+K GD+K I+ FPED++ +DL GK
Sbjct: 172 VDGEEFEGGKGNDMPLVLGSGSMIDGFESQIEGMKGGDEKTIKVTFPEDYNKEDLQGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++++V V+ + A G E +R +++ ++ + K+Q++
Sbjct: 232 EFDITVQKVAEQALPEVDEEFAKAFGVEDGSTEKLRENLQNHMQRELTQTLKTQTKKQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + P +LV+ E + ++ + ++E + + A+RRV
Sbjct: 292 DALLEQNELQCPSALVDQEIQRLKEQAFQQFGGQ-----APIKLEEFPNEPFQEEAERRV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++G + ++ I+ + ++++ L Q + ++++D++ + P LA + A + E
Sbjct: 347 KLGLLVGEVVKQQEIKASPDKVKETLEQLAASY-EDPQQVVDYYYENPQMLASVEAVVVE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
D+ +D ++ ++ + F ++ + + +
Sbjct: 406 DQAVDWLMSQAKVKEETKPFSEVMKINQQQT 436
>gi|134277103|ref|ZP_01763818.1| trigger factor [Burkholderia pseudomallei 305]
gi|134250753|gb|EBA50832.1| trigger factor [Burkholderia pseudomallei 305]
Length = 449
Score = 246 bits (626), Expect = 7e-63, Method: Composition-based stats.
Identities = 102/461 (22%), Positives = 215/461 (46%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDVVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS E + ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFAPKE--------DTQQESTYAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P+++I +V + + + EIDR + + K V F + +T ++
Sbjct: 113 YPEVKIGDLATAEVERSTTTIGDAEIDRTLDILRKQRVHFHARGEGGEHGDGGADTAAQN 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D V + + ++ F++G + E +GLK G+ +E FP+D
Sbjct: 173 GDRVTVDFVGKIDGVAFQGGTAEDFVFVLGEGRMLPEFETAALGLKAGESREFNLKFPDD 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ D A LG E MR + +++ ++
Sbjct: 233 YHGKDVAGKTAQFTVTLKKVEWPHLPEIDADFAKSLGVEDGDLTKMRAEIKENLEREAKR 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 293 RTQSIVKSQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 EMFADQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L ++++
Sbjct: 409 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASATAQA 449
>gi|254475656|ref|ZP_05089042.1| trigger factor [Ruegeria sp. R11]
gi|214029899|gb|EEB70734.1| trigger factor [Ruegeria sp. R11]
Length = 444
Score = 246 bits (626), Expect = 8e-63, Method: Composition-based stats.
Identities = 128/453 (28%), Positives = 244/453 (53%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L + NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 2 MQVTETLNEGLKRGYAITVTAAELDEKVNEKLVEAQPEIEMKGFRKGKVPMAMLKKQFGQ 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E I + + + +R AM+P + + + + D+ + +SY+
Sbjct: 62 RLIGEAMQETIDGAMNKHFEETGDRPAMQPDVKMT-------NEDWKEGDDVNVEMSYEA 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYT 178
LP+I +++ + + + D+ +D +A +A+ +FE +E + D+V +D+
Sbjct: 115 LPEIPEVDLSGVELEKLVVKADDAAVDEALANLAETATSFEAREEGAAAEDGDQVVIDFV 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + + ++ ++GS + LVG K G++K++ FPE++ + LAGK
Sbjct: 175 GKIDGEAFDGGAGEDYPLVLGSNSFIPGFEDQLVGTKAGEEKDVTVSFPEEYGAEHLAGK 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++KEV +P +N++LA + G E + ++ S++++ R +KR +L
Sbjct: 235 EAVFSCTVKEVKAPKAAEINDELAQKFGAEDLAGLKEQISERLEAEYAGAARAVMKRGLL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +FD+P SLVE E I ++ E N + Q D + E + ++ LA+RRV
Sbjct: 295 DKLDALVSFDLPPSLVEAEAKQIAHQLWHE---ENPEVQGHDHGEIEPTEEHNKLAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K +EVT+ EM A+ QQ ++PG E++ + Q+ +LRAPIFE
Sbjct: 352 RLGLLLAELGQKAEVEVTDAEMTQAIMQQARQYPGQERQFFEFIQQNAQMQQQLRAPIFE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+DHI + ++ +++V+ D L E
Sbjct: 412 DKVVDHIAEQAKVSEKEVSKDDLQKAVEALEDE 444
>gi|262394816|ref|YP_003286670.1| cell division trigger factor [Vibrio sp. Ex25]
gi|262338410|gb|ACY52205.1| cell division trigger factor [Vibrio sp. Ex25]
Length = 435
Score = 246 bits (626), Expect = 8e-63, Method: Composition-based stats.
Identities = 89/451 (19%), Positives = 215/451 (47%), Gaps = 18/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVPL + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E + DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVEN---------KEGSDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + + EV + +++ + + K + E +E G +V++D+ S
Sbjct: 112 YPEVELKGLENITVEKPLTEVKDADVEEMIDTLRKQQATWVEVEEAAEDGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + +I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIAGKTAGMEFDIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + +++ + V+ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVAKFGVVEGGVEALKAEVRKNMERELKQAVKNRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +VP +L+E E + Q+ N ++ + + + AKRRV
Sbjct: 292 DGLVEQNDINVPSALIEQEIQVLRQQAAQRFGG------NPEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ +E++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADDEKVKALIEEMATAY-EDPSEVIAYYEQNEEMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
++ ID I+ Q+ +++V F++L + ++
Sbjct: 405 EQAIDAIIAKAQVSEKEVGFNELLNQQQPAA 435
>gi|126739380|ref|ZP_01755073.1| trigger factor [Roseobacter sp. SK209-2-6]
gi|126719480|gb|EBA16189.1| trigger factor [Roseobacter sp. SK209-2-6]
Length = 443
Score = 246 bits (626), Expect = 8e-63, Method: Composition-based stats.
Identities = 128/453 (28%), Positives = 236/453 (52%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L D NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 1 MQVTETLNEGLKRGYAITVTAAELDDKVNEKLVEAQPEVEMKGFRKGKVPMALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E I + + +R A++P++ + + + D+ + +SY+
Sbjct: 61 RLMGEAMQEAIDGAMNKHFEDSGDRPALQPNVKMT-------NEDWKEGDDVNVEMSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I +++ + I + +++ + + +A+ F+ ++ +E GD+V +D+
Sbjct: 114 LPTIPEVDLSGVELEKLIVKAEDEAVTEALNNLAETAKDFDARDEGAAAEDGDQVVIDFL 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + + ++GS E LVG K G++K++ FPE++ + LAGK
Sbjct: 174 GKVDGEAFEGGAGDDYPLVLGSNSFIPGFEEQLVGTKAGEEKDVNVSFPEEYQAEHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++KEV +P +N++LA + G E ++G S++++ R +KR +L
Sbjct: 234 AAVFTCTVKEVKAPKAAEINDELATKFGAEDLEGLKGQISERLEAEYAGASRAVMKRALL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +FD+P SLVE E I ++ + N Q D + E ++ LA+RRV
Sbjct: 294 DKLDDLVSFDLPPSLVEEEAKQIAHQLWHD---DNPDVQGHDHPEIETTDEHNKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG+K +EVT+ EM A+ Q ++PG E++ + Q+ +LRAPIFE
Sbjct: 351 RLGLLLAEIGQKAEVEVTDAEMTQAIMAQARQYPGQERQFFEFIQQNAQMQQQLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKVID + ++ +++V+ D L E
Sbjct: 411 DKVIDSLFDQAKVEEKEVSKDDLQKAVEALEEE 443
>gi|53719038|ref|YP_108024.1| trigger factor [Burkholderia pseudomallei K96243]
gi|76809587|ref|YP_333876.1| trigger factor [Burkholderia pseudomallei 1710b]
gi|126439593|ref|YP_001059357.1| trigger factor [Burkholderia pseudomallei 668]
gi|167902256|ref|ZP_02489461.1| trigger factor [Burkholderia pseudomallei NCTC 13177]
gi|167910495|ref|ZP_02497586.1| trigger factor [Burkholderia pseudomallei 112]
gi|237812685|ref|YP_002897136.1| trigger factor [Burkholderia pseudomallei MSHR346]
gi|254179426|ref|ZP_04886025.1| trigger factor [Burkholderia pseudomallei 1655]
gi|254189185|ref|ZP_04895696.1| trigger factor [Burkholderia pseudomallei Pasteur 52237]
gi|254197415|ref|ZP_04903837.1| trigger factor [Burkholderia pseudomallei S13]
gi|254261612|ref|ZP_04952666.1| trigger factor [Burkholderia pseudomallei 1710a]
gi|67461709|sp|Q63V42|TIG_BURPS RecName: Full=Trigger factor; Short=TF
gi|119370883|sp|Q3JRC7|TIG_BURP1 RecName: Full=Trigger factor; Short=TF
gi|166229025|sp|A3NAI6|TIG_BURP6 RecName: Full=Trigger factor; Short=TF
gi|52209452|emb|CAH35403.1| trigger factor [Burkholderia pseudomallei K96243]
gi|76579040|gb|ABA48515.1| trigger factor [Burkholderia pseudomallei 1710b]
gi|126219086|gb|ABN82592.1| trigger factor [Burkholderia pseudomallei 668]
gi|157936864|gb|EDO92534.1| trigger factor [Burkholderia pseudomallei Pasteur 52237]
gi|169654156|gb|EDS86849.1| trigger factor [Burkholderia pseudomallei S13]
gi|184209966|gb|EDU07009.1| trigger factor [Burkholderia pseudomallei 1655]
gi|237503048|gb|ACQ95366.1| trigger factor [Burkholderia pseudomallei MSHR346]
gi|254220301|gb|EET09685.1| trigger factor [Burkholderia pseudomallei 1710a]
Length = 449
Score = 246 bits (626), Expect = 8e-63, Method: Composition-based stats.
Identities = 102/461 (22%), Positives = 216/461 (46%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDVVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS E + ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFAPKE--------DTQQESTYAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P+++I +V + + + EIDR + + K V F + +T ++
Sbjct: 113 YPEVKIGDLATAEVERSTTTIGDAEIDRTLDILRKQRVHFHARGEGGEHGDGGADTAAQN 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D V + + ++ F++G + E +GLK G+ +E + FP+D
Sbjct: 173 GDRVTVDFVGKIDGVAFQGGTAEDFVFVLGEGRMLPEFETAALGLKAGESREFDLKFPDD 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ D A LG E MR + +++ ++
Sbjct: 233 YHGKDVAGKTAQFTVTLKKVEWPHLPEIDADFAKSLGVEDGDLTKMRAEIKENLEREAKR 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 293 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 EMFADQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L ++++
Sbjct: 409 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASATAQA 449
>gi|257465135|ref|ZP_05629506.1| trigger factor [Actinobacillus minor 202]
gi|257450795|gb|EEV24838.1| trigger factor [Actinobacillus minor 202]
Length = 431
Score = 246 bits (626), Expect = 9e-63, Method: Composition-based stats.
Identities = 82/447 (18%), Positives = 205/447 (45%), Gaps = 17/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EGL+R + + + ++++ + E+++ A + GFR GKVP S I+ +G
Sbjct: 1 MSISIETLEGLQRRVTITVAADKIEAGYKEQLKGYAKNARVDGFRKGKVPHSIIEQRFGL 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + E ++ + + A RP+ T N + D ++++
Sbjct: 61 AARQDVLSEEMQRAFFDAVIAEKINLAGRPTFTPN---------NYQPGQDFSFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K F ++ D+VT+D+ S
Sbjct: 112 FPEVELKGLENIEVEKPVVEITEADLDKMVDVLRKQQATFAETAEAAKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGIVGHKAGEQFDINVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K+V + + + + + ++ +R + +++ + + +VK Q+++
Sbjct: 232 KFAITLKKVENTVLPELTEEFVKKFGSAKTVEELRAEIKKNMQRELKNALTSRVKNQVIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ +VP + V E + + Q+ + + + + + AKRRV
Sbjct: 292 GLLANNDIEVPAAAVAEEIDVLRQQAVQRFGGKPEMAAQL------PAELFEADAKRRVQ 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L ++ N ++V E +++ + + +++ H+ K +R + E+
Sbjct: 346 VGLLLSSVIASNELKVDEARVEAMIADIASAY-EQPAEVVAHYAKNRQLTENIRNVVLEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ +D +L ++ ++ ++FD++ +
Sbjct: 405 QAVDAVLAKAKVTEKAMSFDEVMAQQA 431
>gi|322513312|ref|ZP_08066433.1| trigger factor [Actinobacillus ureae ATCC 25976]
gi|322120911|gb|EFX92763.1| trigger factor [Actinobacillus ureae ATCC 25976]
Length = 433
Score = 246 bits (626), Expect = 9e-63, Method: Composition-based stats.
Identities = 79/448 (17%), Positives = 210/448 (46%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EGL+R + + + ++++ ++ E+++ A + GFR GKVP + I+ +G
Sbjct: 1 MSISIETLEGLQRRVTITVAADKIEAAYKEQLKGYAKNARVDGFRKGKVPHAIIEQRFGL 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + + ++ + + A RP+ T N + + ++++
Sbjct: 61 AARQDVLSDEMQRAFFDAVIAEKINLAGRPTFTPN---------NYQPGQEFSFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K + + ++ D+V +D+ S
Sbjct: 112 FPEVELKGLENIEVEKPVVEITEADLDKMIDVLRKQQATWAKSQEAAQAEDRVVIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFTLAMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K+V S + + + + ++ +R + +++ + V +VK Q+++
Sbjct: 232 KFAITLKKVESIVLPELTEEFVKKFGSAKTVEDLRAEIKKNMQRELKNAVTARVKNQVIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + +VP + V E + + ++ + + + + + AKRRV
Sbjct: 292 GLIAQNEIEVPAAAVAEEVDVLRRQAVQRFGGKPEMAAQL------PAELFEADAKRRVQ 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L T+ N ++V E+ ++ + + + +++ H+ K +R + E+
Sbjct: 346 VGLLLSTVIGTNELKVDEKRVEETIAEIASAY-EQPAEVVAHYAKNRQLTENIRNVVLEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +L ++ ++ +FD++ ++
Sbjct: 405 QAVEAVLAKAKVTEKATSFDEVMAQQAQ 432
>gi|258544429|ref|ZP_05704663.1| trigger factor [Cardiobacterium hominis ATCC 15826]
gi|258520318|gb|EEV89177.1| trigger factor [Cardiobacterium hominis ATCC 15826]
Length = 438
Score = 246 bits (626), Expect = 9e-63, Method: Composition-based stats.
Identities = 101/452 (22%), Positives = 201/452 (44%), Gaps = 17/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + EGL +L V +PS RL +R+++I + I GFRPGKVP + +K YG
Sbjct: 1 MQSSVEHLEGLAHKLTVEVPSARLDQEVAKRLKEITPRVRIDGFRPGKVPPAVVKQKYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + E+I+E E + + P I + G + +K +++
Sbjct: 61 SVRQDVLGEVIEETYREAIQQSGYEPVASPQIELVSGMA--------ANEPVKYTAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P++E+ D + +T EV ++++D + + + F + +E D+VTVD+
Sbjct: 113 MPEVEVKGLDQISITLPRSEVRDEDVDNMITTLRRQQGTFREADKAAEDTDRVTVDFVGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V + S +N+ FI+G + + + G K G++K + FP D+ DLAGK
Sbjct: 173 LDGVAFDGGSGENMNFIIGDGRMLPDFEAGIRGSKAGEEKTFDVAFPADYHSADLAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + VN G + + A R + + E R + ++
Sbjct: 233 QFTATVKKVEALELPEVNETFIKAFGIDSGDQEAFRKAIRDNMTRELENAQRNIRRNRMF 292
Query: 299 DYISNKY-TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D + K V E +V E + ++ E + E + + A+ R
Sbjct: 293 DALLEKNAEQTVAEGMVRMEIERMAHDMQLERQ-----IPDAQQRRELAARIFDEPARNR 347
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V +++ + + +EV + + + + + ++++D ++K L L A I
Sbjct: 348 VRLSLLVNKLLDDRKLEVDQARVDARIQSIAATY-EDPQEVVDWYKKDQETLRRLEAAIL 406
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
E+++ID + Q+ + TF ++ + +
Sbjct: 407 EEQLIDQLYTQAQVSEEDKTFQEVMALGQQRA 438
>gi|332283981|ref|YP_004415892.1| trigger factor [Pusillimonas sp. T7-7]
gi|330427934|gb|AEC19268.1| trigger factor [Pusillimonas sp. T7-7]
Length = 436
Score = 246 bits (626), Expect = 9e-63, Method: Composition-based stats.
Identities = 92/446 (20%), Positives = 208/446 (46%), Gaps = 15/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + GL+R +D+++ + +++ + A ++GFRPGK PLS I+ +G
Sbjct: 1 MQPEVEILSGLERRVDLVVSIADVEKEVQTQLKRVARTAKVQGFRPGKAPLSLIERSHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + I+ + + +++ + R A P++ + + ++++
Sbjct: 61 GIRYDVINSEVGRSLDKVIGETKLRVAGTPNLEPKTEGVE--------EGTMAFSATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYTV 179
P++++ LQV + +V + E+ R + + K +E +E ++ D+VT+D+T
Sbjct: 113 YPEVQVPDLATLQVKRSNVDVGDAEVQRTIDILRKQRANYEAREGRAAQDDDRVTLDFTG 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D V E S + F++G + E + G+K G+ K FPED+ K++AGK
Sbjct: 173 TIDGVAFEGGSAEKFPFVLGQGRMLPEFETAVRGMKAGESKTFPLNFPEDYGSKEVAGKT 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ EV + V+ + A + I++ + + + K +
Sbjct: 233 AEFAITVTEVAEGIMPEVDAEFAKSLGQPEGDVEKLLADVRNNIEREVKVRAQARSKASV 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D + +FDVP++LV+N+ G + R E+ + + ++ + ++RR
Sbjct: 293 MDALVEACSFDVPKALVQNDAQGRVTAAREELKQRGVPNADSV---PIPVEAFTAESERR 349
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+++ + + +++ E++++ + + + +++ ++ AE+ A +
Sbjct: 350 VRLGLLVSELVQAADLQAKPEQVRARIEEFAQNY-EQPAQVVAYYLSDRQRRAEIEAIVL 408
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFD 443
ED V++H+L Q+ D V F++L
Sbjct: 409 EDNVVEHVLSKAQVTDEDVAFEELMG 434
>gi|257455803|ref|ZP_05621029.1| trigger factor [Enhydrobacter aerosaccus SK60]
gi|257446817|gb|EEV21834.1| trigger factor [Enhydrobacter aerosaccus SK60]
Length = 454
Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats.
Identities = 100/449 (22%), Positives = 213/449 (47%), Gaps = 13/449 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+V L+ +L V +P + + +RI + A I GFR GKVP+SHI++ YG
Sbjct: 15 EVTTNKKSNLETQLTVKVPVSTIQGRVEKRINQVAKTAKIDGFRKGKVPVSHIRAQYGAG 74
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I E I+++I++ V + + + + RA P+I + E+D L + + ++
Sbjct: 75 IQQEVINDVIRDTVFDAIRQENIRAVGMPNIDDVKLENDF----------LVYQATVEVF 124
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++E+ D++V + + V + ++D + + K + K+ ++ GD+V D+ S+
Sbjct: 125 PEVEVQGLSDIEVERQVANVGDADVDTMIENLQKQRQTYVAKDDAADEGDQVKFDFEGSI 184
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D E S ++ ++GS + + + G+K G++K I+ FPED+ ++L GK+ +
Sbjct: 185 DGEKFEGGSAQDFSLVLGSGRMIPGFEDGIKGMKAGEEKTIDVTFPEDYQAENLQGKQAQ 244
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++K V +N++ G ++ + +++ + R +VK +
Sbjct: 245 FKINVKSVEQSQLPELNDEFLEAFGVTEGGLDKLKADVRKNMEREVKSAARNQVKEAAFN 304
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ K DVP S++E E + + + + D + + A R
Sbjct: 305 ALLEKNEIDVPASMLEQEIDRQRSMMLNRFAQQFGADPKTFNKDMLPNELFEEQALRAAR 364
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
GI++ ++ E N +EV +E + + + + + +++D++ A + A + ED
Sbjct: 365 LGIIVSSLIESNKLEVDQERVTTYINEMAENY-EDPNEVIDYYTNNAQERANIEAVVLED 423
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSES 448
+V+DHIL ++ D +V++ L + ++
Sbjct: 424 QVVDHILSQGKVTDTEVSYQDLLASQQQA 452
>gi|32034865|ref|ZP_00134971.1| COG0544: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger
factor) [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|126208971|ref|YP_001054196.1| trigger factor [Actinobacillus pleuropneumoniae L20]
gi|166229009|sp|A3N2F5|TIG_ACTP2 RecName: Full=Trigger factor; Short=TF
gi|126097763|gb|ABN74591.1| trigger factor [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
Length = 433
Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats.
Identities = 78/448 (17%), Positives = 210/448 (46%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EGL+R + + + ++++ ++ E+++ A + GFR GKVP + I+ +G
Sbjct: 1 MSISIETLEGLQRRVTITVAADKIEAAYKEQLKGYAKNARVDGFRKGKVPHAIIEQRFGL 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + + ++ + + A RP+ T N + + ++++
Sbjct: 61 AARQDVLSDEMQRAFFDAVIAEKINLAGRPTFTPN---------NYQPGQEFSFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K + + ++ D+V +D+ S
Sbjct: 112 FPEVELKGLENIEVEKPVVEITEADLDKMIDVLRKQQATWAESQAAAQAEDRVVIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFTLAMGQDRMIPGFEEGIVGHKAGEQFDIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K+V + + + + + ++ +R + +++ + V +VK Q+++
Sbjct: 232 KFAITLKKVENIVLPELTEEFVKKFGSAKTVEDLRAEIKKNMQRELKNAVTARVKNQVIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + +VP + V E + + ++ + + + + + AKRRV
Sbjct: 292 GLIAQNEIEVPAAAVAEEVDVLRRQAVQRFGGKPEMAAQL------PAELFEADAKRRVQ 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L T+ N ++V E+ ++ + + + +++ H+ K +R + E+
Sbjct: 346 VGLLLSTVIGTNELKVDEKRVEETIAEIASAY-EQPAEVVAHYAKNRQLTENIRNVVLEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +L ++ ++ +FD++ ++
Sbjct: 405 QAVEVVLAKAKVTEKATSFDEVMAQQAQ 432
>gi|159044733|ref|YP_001533527.1| trigger factor [Dinoroseobacter shibae DFL 12]
gi|189035936|sp|A8LQQ9|TIG_DINSH RecName: Full=Trigger factor; Short=TF
gi|157912493|gb|ABV93926.1| trigger factor [Dinoroseobacter shibae DFL 12]
Length = 442
Score = 245 bits (625), Expect = 9e-63, Method: Composition-based stats.
Identities = 127/451 (28%), Positives = 239/451 (52%), Gaps = 10/451 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V E +EGLKR + + + L NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 1 MNVTETLNEGLKRGYSITVTAAELDAKVNEKLSEAQPEIEMKGFRKGKVPMALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + E I + + +R A++P I + + + D+++ +SY+
Sbjct: 61 KLLGEAMQETIDGAMAKHFEDSGDRPALQPEIKMT-------NEDWKEGDDIEVAMSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP++ + F + + + + + DE+ ++ + +A+N +FE KE +E GD+V +D+
Sbjct: 114 LPEVPDTDFSTVTLEKLVVKADEEAVNEALQNLAENAKSFETKEGAAEDGDQVVIDFLGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + ++ ++GS E L+G G++K ++ FPE + + LAGK
Sbjct: 174 VDGEAFEGGAAEDYPLVLGSNSFIPGFEEQLIGTSAGEEKNVDVSFPEQYQAEHLAGKAA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
IKEV +P +++++A + G E ++G S++++ R +KR++LD
Sbjct: 234 VFECKIKEVKAPKAAEIDDEMAKQFGAEDLETLKGQISERLEAEYAGAARAVMKRKLLDE 293
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ F++P SLV E I ++ E N + + D + E + ++ LA+RRV
Sbjct: 294 LDTLVKFELPPSLVATEAGQIAHQLWHE---ENPEVEGHDHPEIEPTEEHNKLAERRVRL 350
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G++L +G+KN I+VT+ EM A+ Q ++PG E++ + Q+ +LRAPIFEDK
Sbjct: 351 GLLLAELGQKNEIQVTDAEMTQAIMAQARQYPGQERQFFEFIQQNQQMQQQLRAPIFEDK 410
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
V+D+I + + +++++ D L E
Sbjct: 411 VVDYIFELATVTEKEISKDDLQKAVEALDDE 441
>gi|219871614|ref|YP_002475989.1| trigger factor [Haemophilus parasuis SH0165]
gi|254789004|sp|B8F6T9|TIG_HAEPS RecName: Full=Trigger factor; Short=TF
gi|219691818|gb|ACL33041.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Haemophilus parasuis SH0165]
Length = 431
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 84/443 (18%), Positives = 209/443 (47%), Gaps = 17/443 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EGL+R + V + ++++ + E+++ A + GFR GKVP S I+ YG
Sbjct: 1 MSISIETLEGLQRRVTVTVAADKIEAGYKEQLKGYAKNARVDGFRKGKVPHSIIEQRYGL 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + E ++ +++ A RP+ T N + D ++++
Sbjct: 61 AARQDVLSEEMQRAFFDVVIAEKINLAGRPTFTPN---------NYQPGQDFSFVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K F ++ D+VT+D+ S
Sbjct: 112 FPEVELKGLENIEVEKPVVEITEADLDKMVDVLRKQQATFAETTEAAKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGIVGHKAGEQFDIDVIFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K+V + + + + + ++ +R + +++ + + +VK Q+++
Sbjct: 232 KFAITLKKVENIVLPELTEEFVKKFGSAKTVEELRVEIKKNMQRELKNALTTRVKNQVIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ +VP S V E + + Q+ + + + + + + AKRRV
Sbjct: 292 GLLANNDIEVPSSAVAEEVDVLRQQAVQRFGGKPEMAAQL------PAELFEVEAKRRVQ 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L ++ N ++V E+ ++ + + + ++++++ K P +R + E+
Sbjct: 346 VGLLLSSVITSNELKVDEDRVKETISELASAY-EQPAEVVEYYAKNPRLTDNIRNVVLEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLF 442
+ ++ +L ++ ++ +FD++
Sbjct: 405 QAVEAVLAKAKVTEKASSFDEVM 427
>gi|240948834|ref|ZP_04753190.1| trigger factor [Actinobacillus minor NM305]
gi|240296649|gb|EER47260.1| trigger factor [Actinobacillus minor NM305]
Length = 431
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 82/447 (18%), Positives = 205/447 (45%), Gaps = 17/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EGL+R + + + ++++ + E+++ A + GFR GKVP S I+ +G
Sbjct: 1 MSISIETLEGLQRRVTITVAADKIEAGYKEQLKGYAKNARVDGFRKGKVPHSIIEQRFGL 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + E ++ + + A RP+ T N + D ++++
Sbjct: 61 AARQDVLSEEMQRAFFDAVIAEKINLAGRPTFTPN---------NYQPGQDFSFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K F ++ D+VT+D+ S
Sbjct: 112 FPEVELKGLENIEVEKPVVEITEADLDKMVDVLRKQQATFAETAEAAKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGIVGHKAGEQFDINVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K+V + + + + + ++ +R + +++ + + +VK Q+++
Sbjct: 232 KFAITLKKVENIVLPELTEEFVKKFGSAKTVEELRAEIKKNMQRELKNALTSRVKNQVIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ +VP + V E + + Q+ + + + + + AKRRV
Sbjct: 292 GLLANNDIEVPAAAVAEEVDVLRQQAVQRFGGKPEMAAQL------PAELFEADAKRRVQ 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L ++ N ++V E +++ + + +++ H+ K +R + E+
Sbjct: 346 VGLLLSSVIASNELKVDEARVEAMIADIASAY-EQPAEVVAHYAKNRQLTENIRNVVLEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ +D +L ++ ++ ++FD++ +
Sbjct: 405 QAVDAVLAKAKVTEKAMSFDEVMAQQA 431
>gi|82703458|ref|YP_413024.1| trigger factor [Nitrosospira multiformis ATCC 25196]
gi|119370912|sp|Q2Y6I9|TIG_NITMU RecName: Full=Trigger factor; Short=TF
gi|82411523|gb|ABB75632.1| trigger factor [Nitrosospira multiformis ATCC 25196]
Length = 435
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 99/446 (22%), Positives = 199/446 (44%), Gaps = 16/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + L+R L+V +P ++ R++ + A GFRPGKVPL + YG
Sbjct: 1 MQTNVENLGALERRLNVSVPQEKIETEVESRLKRLARTAKFHGFRPGKVPLKIVAQQYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E +++++K+ E + + + R A P ESD T ++ ++++
Sbjct: 61 QVRQEVMEDVLKKNFSEAVRENNLRVAGYPRFEPKLAESD--------TAQVEFSATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P I + + + + EV ++D+ + + K V FE + ++ GD++ +DY
Sbjct: 113 YPDITLGDLGGAHIERPVVEVTPADVDKTLEVLRKQRVEFEPVDRPAQAGDRINIDYRGL 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D +N ++G L + E L+G+ G K E FP D+ K++AGK
Sbjct: 173 IDGAEFAGGKAENFSLVLGEGRLLKDFEEPLLGMSPGQSKTFEVAFPSDYHGKEVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ V S VN D A LG MR +++ + V ++K Q++
Sbjct: 233 VFEVKLSGVESSKLPEVNADFATSLGIAEGDVEKMRSEIRANLEREAAKRVNARLKEQVM 292
Query: 299 DYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + + D P++LVE E + +++ R + +S ++N + + A+ R
Sbjct: 293 QVLIDTTSNIDPPKALVEMELDRLMEDARNDFASRGLDTKNFSLPHDMLQE----RAQHR 348
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G++LG + + +N+ E++++ + + + +++ P L E +
Sbjct: 349 VKLGLILGELVKMHNLHPKPEQVRAVVEDLAQAY-ENPAEVVSWHYAAPERLREAESAAL 407
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFD 443
ED V+ +L+ + + + D+L
Sbjct: 408 EDNVVTWVLEKAVVTGKPMPLDELMG 433
>gi|167719121|ref|ZP_02402357.1| trigger factor [Burkholderia pseudomallei DM98]
Length = 449
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 102/461 (22%), Positives = 215/461 (46%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDVVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS E + ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFAPKE--------DTQQESAYAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P+++I +V + + + EIDR + + K V F + +T ++
Sbjct: 113 YPEVKIGDLATAEVERSTTTIGDAEIDRTLDILRKQRVHFHARGEGGEHGDGGADTAAQN 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D V + + ++ F++G + E +GLK G+ +E FP+D
Sbjct: 173 GDRVTVDFVGKIDGVAFQGGTAEDFVFVLGEGRMLPEFETAALGLKAGESREFNLKFPDD 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ D A LG E MR + +++ ++
Sbjct: 233 YHGKDVAGKTAQFTVTLKKVEWPHLPEIDADFAKSLGVEDGDLTKMRAEIKENLEREAKR 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 293 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 EMFADQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L ++++
Sbjct: 409 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASATAQA 449
>gi|92114169|ref|YP_574097.1| trigger factor [Chromohalobacter salexigens DSM 3043]
gi|119370889|sp|Q1QVW0|TIG_CHRSD RecName: Full=Trigger factor; Short=TF
gi|91797259|gb|ABE59398.1| trigger factor [Chromohalobacter salexigens DSM 3043]
Length = 448
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 88/440 (20%), Positives = 216/440 (49%), Gaps = 17/440 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + ++R + V +P+ + + R+++ + GFR GK+PL+ ++ +G+
Sbjct: 1 MQVSVESTSQIERRVTVQVPAAEVDQAVATRLQETAKNVRLNGFRRGKIPLTVVRQRFGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + E++++ + +++ A P + + E DL+ + ++
Sbjct: 61 EVRNEVVGEMMRQHYVQAITQESLNPAGSPQVEPT---------VDEDGKDLEFVATLEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++S ++ ++ + EV E ++D+ + + + +E + + GD+VT+D+
Sbjct: 112 YPEFELNSIENTEIERPQAEVTEADVDQMIETLRTQHAEWEAVDRAAANGDQVTIDFEGY 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + E + + + +GS E LVG K GD+ EI+ FPED+ LAG++
Sbjct: 172 LGDEPFEGGAAEGHELELGSNSFIPGFEEQLVGAKAGDELEIKVTFPEDYQAAHLAGQEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +V V+++ R G E +A R + ++ V +VK+Q L
Sbjct: 232 TFKVKVHKVAGKQLPEVDDEFIKRFGVEEGGVAAFRADVQKNMEHELSQAVTNRVKQQAL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP+SL++ E G+ ++ + + + + + AK+RV
Sbjct: 292 EALQQANDIPVPQSLIQQETQGLKRQAAQQFGLGEDFD-----VSQLPDELFADQAKKRV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + + N ++ +++E+++ + + ++ +++++++ K ++++ + E
Sbjct: 347 QVGLLLAEVVKVNELDASDDEIKARVEELAQQY-QQPEQVIEYYLKNDEMKNQIKSSVLE 405
Query: 419 DKVIDHILKSVQIVDRKVTF 438
DK +D +L+ Q+ D ++++
Sbjct: 406 DKAVDKLLEQAQVKDVEMSY 425
>gi|53723668|ref|YP_103113.1| trigger factor [Burkholderia mallei ATCC 23344]
gi|121598496|ref|YP_993275.1| trigger factor [Burkholderia mallei SAVP1]
gi|124385625|ref|YP_001029281.1| trigger factor [Burkholderia mallei NCTC 10229]
gi|126451033|ref|YP_001080785.1| trigger factor [Burkholderia mallei NCTC 10247]
gi|126454578|ref|YP_001066628.1| trigger factor [Burkholderia pseudomallei 1106a]
gi|166998702|ref|ZP_02264556.1| trigger factor [Burkholderia mallei PRL-20]
gi|167738115|ref|ZP_02410889.1| trigger factor [Burkholderia pseudomallei 14]
gi|167815307|ref|ZP_02446987.1| trigger factor [Burkholderia pseudomallei 91]
gi|167823709|ref|ZP_02455180.1| trigger factor [Burkholderia pseudomallei 9]
gi|167845260|ref|ZP_02470768.1| trigger factor [Burkholderia pseudomallei B7210]
gi|167893804|ref|ZP_02481206.1| trigger factor [Burkholderia pseudomallei 7894]
gi|167918524|ref|ZP_02505615.1| trigger factor [Burkholderia pseudomallei BCC215]
gi|226197280|ref|ZP_03792857.1| trigger factor [Burkholderia pseudomallei Pakistan 9]
gi|238562205|ref|ZP_00440782.2| trigger factor [Burkholderia mallei GB8 horse 4]
gi|242315263|ref|ZP_04814279.1| trigger factor [Burkholderia pseudomallei 1106b]
gi|254178713|ref|ZP_04885368.1| trigger factor [Burkholderia mallei ATCC 10399]
gi|254200064|ref|ZP_04906430.1| trigger factor [Burkholderia mallei FMH]
gi|254206399|ref|ZP_04912751.1| trigger factor [Burkholderia mallei JHU]
gi|254297311|ref|ZP_04964764.1| trigger factor [Burkholderia pseudomallei 406e]
gi|254358191|ref|ZP_04974464.1| trigger factor [Burkholderia mallei 2002721280]
gi|67461701|sp|Q62JK6|TIG_BURMA RecName: Full=Trigger factor; Short=TF
gi|166229021|sp|A3MKJ9|TIG_BURM7 RecName: Full=Trigger factor; Short=TF
gi|166229022|sp|A2SBG2|TIG_BURM9 RecName: Full=Trigger factor; Short=TF
gi|166229023|sp|A1V4X2|TIG_BURMS RecName: Full=Trigger factor; Short=TF
gi|166229024|sp|A3NWA7|TIG_BURP0 RecName: Full=Trigger factor; Short=TF
gi|52427091|gb|AAU47684.1| trigger factor [Burkholderia mallei ATCC 23344]
gi|121227306|gb|ABM49824.1| trigger factor [Burkholderia mallei SAVP1]
gi|124293645|gb|ABN02914.1| trigger factor [Burkholderia mallei NCTC 10229]
gi|126228220|gb|ABN91760.1| trigger factor [Burkholderia pseudomallei 1106a]
gi|126243903|gb|ABO06996.1| trigger factor [Burkholderia mallei NCTC 10247]
gi|147749660|gb|EDK56734.1| trigger factor [Burkholderia mallei FMH]
gi|147753842|gb|EDK60907.1| trigger factor [Burkholderia mallei JHU]
gi|148027318|gb|EDK85339.1| trigger factor [Burkholderia mallei 2002721280]
gi|157807777|gb|EDO84947.1| trigger factor [Burkholderia pseudomallei 406e]
gi|160699752|gb|EDP89722.1| trigger factor [Burkholderia mallei ATCC 10399]
gi|225930659|gb|EEH26669.1| trigger factor [Burkholderia pseudomallei Pakistan 9]
gi|238523067|gb|EEP86508.1| trigger factor [Burkholderia mallei GB8 horse 4]
gi|242138502|gb|EES24904.1| trigger factor [Burkholderia pseudomallei 1106b]
gi|243065057|gb|EES47243.1| trigger factor [Burkholderia mallei PRL-20]
Length = 449
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 102/461 (22%), Positives = 216/461 (46%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDVVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS E + ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFAPKE--------DTQQESAYAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P+++I +V + + + EIDR + + K V F + +T ++
Sbjct: 113 YPEVKIGDLATAEVERSTTTIGDAEIDRTLDILRKQRVHFHARGEGGEHGDGGADTAAQN 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D V + + ++ F++G + E +GLK G+ +E + FP+D
Sbjct: 173 GDRVTVDFVGKIDGVAFQGGTAEDFVFVLGEGRMLPEFETAALGLKAGESREFDLKFPDD 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ D A LG E MR + +++ ++
Sbjct: 233 YHGKDVAGKTAQFTVTLKKVEWPHLPEIDADFAKSLGVEDGDLTKMRAEIKENLEREAKR 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 293 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 EMFADQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L ++++
Sbjct: 409 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASATAQA 449
>gi|84687212|ref|ZP_01015093.1| trigger factor protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664800|gb|EAQ11283.1| trigger factor protein [Rhodobacterales bacterium HTCC2654]
Length = 448
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 128/453 (28%), Positives = 246/453 (54%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V E +EGLKR +++P++ L NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 6 MSVTETLNEGLKRGYKIVVPASDLDAKVNEKLAEAQPEVEMKGFRKGKVPMALLKKNFGQ 65
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E + + + R AM+P + + + + D+++ ++Y+
Sbjct: 66 RLMGEAMQEAVDGAMNAHFEETGHRPAMQPEVKMT-------NEDWKEGDDVEVEMTYEA 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I D+++ + + + + E++ + +A+N FE ++ +++ GD+V +D+
Sbjct: 119 LPDIPDVDLSDIKLERLVVKASDDEVNDALKNLAENAQNFEDRKKGSKAKDGDQVVLDFV 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + S ++ ++GS E LVG+K G++K++ FPE++ ++LAGK
Sbjct: 179 GKIDGEAFDGGSAEDFPLVLGSGQFIPGFEEQLVGVKAGEEKDVTVSFPEEYGAENLAGK 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +IKEV P +++DLA + G E+ A++ +++++ RQ +KR +L
Sbjct: 239 EAVFSCTIKEVKEPKAAEIDDDLAQKYGAENLEALKTQVTERLEAEYAGAARQVMKRSLL 298
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + K +FD+P SLVE E I ++ E N D + E LA+RRV
Sbjct: 299 DALDGKVSFDLPPSLVEAEAKQIAHQLWHE---ENPDVHGHDHPEIEVSDDAQKLAERRV 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IG+K ++VT+ E A+ Q ++PG E++ D Q+ P +++AP+FE
Sbjct: 356 RLGLVLADIGQKAEVQVTDAEFTQAVMNQARQYPGQERQFFDFVQQNPQMRQQIQAPLFE 415
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+DHI + ++ +++V+ ++L E E
Sbjct: 416 DKVVDHIAEKAEVTEKEVSKEELEKAVEELDNE 448
>gi|171320789|ref|ZP_02909796.1| trigger factor [Burkholderia ambifaria MEX-5]
gi|171093959|gb|EDT39073.1| trigger factor [Burkholderia ambifaria MEX-5]
Length = 448
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 99/461 (21%), Positives = 215/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDTVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + +++ ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRSENLRVAGQPSFEPKQEQAE---------DAYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V F + E
Sbjct: 112 YPEVKIGDLATAEVERSTTSIGDAEIDRTLDILRKQRVHFHARGEAGEHGDGGADTAAKN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + + ++ F++G + E +GLK G+ + + FP+D
Sbjct: 172 GDRVTVDFVGKIDDVAFQGGTAEDFPFVLGEGRMLPEFETAALGLKVGEARTFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K++ P ++ + A LG E MR + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFAEQAERRVKLGLVLAELVKSNGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 448
>gi|28897690|ref|NP_797295.1| trigger factor [Vibrio parahaemolyticus RIMD 2210633]
gi|153839644|ref|ZP_01992311.1| trigger factor [Vibrio parahaemolyticus AQ3810]
gi|260364540|ref|ZP_05777149.1| trigger factor [Vibrio parahaemolyticus K5030]
gi|260879436|ref|ZP_05891791.1| trigger factor [Vibrio parahaemolyticus AN-5034]
gi|260898327|ref|ZP_05906823.1| trigger factor [Vibrio parahaemolyticus Peru-466]
gi|260902812|ref|ZP_05911207.1| trigger factor [Vibrio parahaemolyticus AQ4037]
gi|32363208|sp|Q87R81|TIG_VIBPA RecName: Full=Trigger factor; Short=TF
gi|28805903|dbj|BAC59179.1| trigger factor [Vibrio parahaemolyticus RIMD 2210633]
gi|149746834|gb|EDM57822.1| trigger factor [Vibrio parahaemolyticus AQ3810]
gi|308087998|gb|EFO37693.1| trigger factor [Vibrio parahaemolyticus Peru-466]
gi|308093201|gb|EFO42896.1| trigger factor [Vibrio parahaemolyticus AN-5034]
gi|308108639|gb|EFO46179.1| trigger factor [Vibrio parahaemolyticus AQ4037]
gi|308115383|gb|EFO52923.1| trigger factor [Vibrio parahaemolyticus K5030]
gi|328473327|gb|EGF44175.1| trigger factor [Vibrio parahaemolyticus 10329]
Length = 434
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 90/450 (20%), Positives = 215/450 (47%), Gaps = 18/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVPL + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPLKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E + DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVEN---------KEGADLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + + EV E +++ + + K + E +E G +V++D+ S
Sbjct: 112 YPEVELKGLENITVEKPLTEVKEADVEEMIETLRKQQATWVEVEEAAEAGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + +I+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIAGKTAGMEFDIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + +++ + V+ ++K Q +
Sbjct: 232 KFAIKVNKVEARELPELNDEFVAKFGVAEGGVDALKAEVRKNMERELKQAVKTRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP +L+E E + + Q+ N ++ + + + AKRRV
Sbjct: 292 EGLVKENEIDVPAALIEQEIHVLRQQAAQRFGG------NPEAAAQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + ++ +E++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKSEELKADDEKVKALIEEMATAY-EDPSEVIAYYEQNEQMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ ID I+ Q+ +++V F++L + +
Sbjct: 405 EQAIDAIIAKAQVTEKEVGFNELLNQQPAA 434
>gi|170702049|ref|ZP_02892965.1| trigger factor [Burkholderia ambifaria IOP40-10]
gi|170133035|gb|EDT01447.1| trigger factor [Burkholderia ambifaria IOP40-10]
Length = 448
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 99/461 (21%), Positives = 214/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDTVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + + + ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFEPKQEQVE---------DAYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V F + E
Sbjct: 112 YPEVKIGDLATAEVERSTTSIGDAEIDRTLDILRKQRVHFHARGEAGEHGDGGADTAAKN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + + ++ F++G + E +GLK G+ + + FP+D
Sbjct: 172 GDRVTVDFVGKIDDVAFQGGTAEDFPFVLGEGRMLPEFETAALGLKVGEARTFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K++ P ++ + A LG E MR + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKIEWPHLPEIDGEFAKSLGIEDGDLTKMRAEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFAEQAERRVKLGLVLAELVKSNGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 448
>gi|217421784|ref|ZP_03453288.1| trigger factor [Burkholderia pseudomallei 576]
gi|217395526|gb|EEC35544.1| trigger factor [Burkholderia pseudomallei 576]
Length = 449
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 102/461 (22%), Positives = 216/461 (46%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDAVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS E + ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFAPKE--------DTQQESAYAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P+++I +V + + + EIDR + + K V F + +T ++
Sbjct: 113 YPEVKIGDLATAEVERSTTTIGDAEIDRTLDILRKQRVHFHARGEGGEHGDGGADTAAQN 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D V + + ++ F++G + E +GLK G+ +E + FP+D
Sbjct: 173 GDRVTVDFVGKIDGVAFQGGTAEDFVFVLGEGRMLPEFETAALGLKAGESREFDLKFPDD 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ D A LG E MR + +++ ++
Sbjct: 233 YHGKDVAGKTAQFTVTLKKVEWPHLPEIDADFAKSLGVEDGDLTKMRAEIKENLEREAKR 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 293 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 EMFADQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L ++++
Sbjct: 409 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASATAQA 449
>gi|206560360|ref|YP_002231124.1| trigger factor [Burkholderia cenocepacia J2315]
gi|238693099|sp|B4EBM4|TIG_BURCJ RecName: Full=Trigger factor; Short=TF
gi|198036401|emb|CAR52297.1| trigger factor [Burkholderia cenocepacia J2315]
Length = 448
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 100/461 (21%), Positives = 216/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDTVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYSG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + +++ ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFEPKQEQAE---------DAYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V F + E
Sbjct: 112 YPEVKIGDLATAEVERSTTTIGDAEIDRTLDILRKQRVHFHARGEAGEHGDGGADTAAKN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + + ++ F++G + E +GLK G+Q+ + FP+D
Sbjct: 172 GDRVTVDFVGKIDDVAFQGGTAEDFPFVLGEGRMLPEFETAALGLKVGEQRTFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K++ P ++ + A LG E MR + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 448
>gi|27363513|ref|NP_759041.1| trigger factor [Vibrio vulnificus CMCP6]
gi|320156970|ref|YP_004189349.1| cell division trigger factor [Vibrio vulnificus MO6-24/O]
gi|32363210|sp|Q8DG25|TIG_VIBVU RecName: Full=Trigger factor; Short=TF
gi|27359629|gb|AAO08568.1| trigger factor [Vibrio vulnificus CMCP6]
gi|319932282|gb|ADV87146.1| cell division trigger factor [Vibrio vulnificus MO6-24/O]
Length = 432
Score = 245 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 218/448 (48%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E + DL ++++
Sbjct: 61 AVRQDILGEVMQRHFIEAIIKEKINPAGAPTFAPVEN---------KEGSDLVFNATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + +++ + + K + E +E G +V++D+ S
Sbjct: 112 YPEVELKGLENITVEKPAVEVKDADVEEMIETLRKQQATWTEVEEAAEAGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + EI+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIEGKTKGMEFEIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + +++ + V+ ++K Q +
Sbjct: 232 KFAIKVNKVEARQLPELNDEFVAKFGVAEGGIDALKAEVRKNMERELKQAVKNRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E N + Q+ NV++ + + + AKRRV
Sbjct: 292 DGLVKENEIDVPAALIDQEINVLRQQAAQRFGG------NVEAAMQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + + ++V EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKAHELKVDEEKVKAIITEMATAY-EDPTEVVTYYEQNEQLMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ID I+ Q+ +++V+F++L + +
Sbjct: 405 EQAIDAIIAKAQVSEKEVSFNELMNQPA 432
>gi|261492865|ref|ZP_05989412.1| trigger factor [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494788|ref|ZP_05991266.1| trigger factor [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309499|gb|EEY10724.1| trigger factor [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311547|gb|EEY12703.1| trigger factor [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 432
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 86/448 (19%), Positives = 209/448 (46%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EGLKR + + +P++++ ++ E+++ A + GFR GKVP S I+ +G
Sbjct: 1 MSFSIETLEGLKRRVTINVPADKIEAAYKEQLKGYAKNARVDGFRKGKVPHSIIEQRFGI 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + + ++ E + A RP+ T N + D +++
Sbjct: 61 AARQDVLSDEMQRAFFEAVIAEKINLAGRPTFTPN---------NYQPGQDFSFTAEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ + ++D+ + + K + + ++ +VT+D+ S
Sbjct: 112 FPEVELKGLENIEVEKPVVEIADADLDKMVDVLRKQQATWSESQEAAKAESRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + +VG K G+Q +I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLFMGQGRMIPGFEDGIVGRKAGEQFDIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K+V + + + + +S +R + +++ + V +VK Q+++
Sbjct: 232 KFAITLKKVEEMVLPELTEEFVKKFGNAKSVEELRAEIKKNMQRELKNAVTSRVKTQVIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + +VP + VE E N + Q+ + + + + + AKRRV
Sbjct: 292 GLIAQNDVEVPAAAVEEEINVLRQQAVQRFGGKPEMAAQL------PAELFEAEAKRRVQ 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L +I N ++V E+ ++ + + +++ H+ K +R + E+
Sbjct: 346 VGLLLSSIIGSNELKVDEKRVEEMIADIASAY-EQPAEVVAHYAKNRQLTENIRNVVLEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ +D +L ++ ++ ++FD++ ++
Sbjct: 405 QAVDAVLAKAKVTEKTMSFDEVMSQQAQ 432
>gi|221639579|ref|YP_002525841.1| trigger factor [Rhodobacter sphaeroides KD131]
gi|254789017|sp|B9KJP3|TIG_RHOSK RecName: Full=Trigger factor; Short=TF
gi|221160360|gb|ACM01340.1| Trigger factor [Rhodobacter sphaeroides KD131]
Length = 444
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 127/452 (28%), Positives = 228/452 (50%), Gaps = 11/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E EGLKR + + + L E++ + + +KGFR GKVPL+ +K +G
Sbjct: 1 MQVTETQKEGLKRAYTITVTAAELDAKVQEKLVEAQPDIEMKGFRKGKVPLAMLKKQFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L + + + I + + L +R AM+P + + +G + D+ + + Y+
Sbjct: 61 RLLGDAMQDAIDGAMRDHLETSGDRPAMQPEVRMVDG------ETWKEGTDVVVEMKYEA 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP+I + + + + + DE I+ + +A++ FE + +++ GD+V +D+
Sbjct: 115 LPEIPEIETSKVSLERLVVKADEAAIEEALKNLAESAQNFEDRRKGSKAKDGDQVVIDFK 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + E S ++ ++GS E LVG K D+ ++ FP ++ K LAGK
Sbjct: 175 GSVDGELFEGGSAEDYPLVLGSGSFIPGFEEQLVGTKVDDEVTVKVTFPAEYGAKHLAGK 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V +P ++++LA + G E +A++G S++++ + R +KR +L
Sbjct: 235 EAEFACTVKAVKAPKAAELDDELAKKYGAEDLAALKGQISERLEAEYKGASRAVLKRALL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +F++P LVE E + I ++ E + + E + LA+RRV
Sbjct: 295 DQLDQMVSFELPSKLVEAEAHQIAHQLWHEEHPE---EHGHNHGNIEPTDEHKALAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG K + VT+ EM A+ Q ++PG E+ + QK P +LRAPIFE
Sbjct: 352 RLGLLLAEIGRKAEVTVTDAEMTQAVLAQARQYPGQERAYFEFVQKNPQIQQQLRAPIFE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D IL+ + +++V D L
Sbjct: 412 DKVVDLILEGATVTEKEVGKDDLQKAIEALDE 443
>gi|167854905|ref|ZP_02477681.1| trigger factor [Haemophilus parasuis 29755]
gi|167853972|gb|EDS25210.1| trigger factor [Haemophilus parasuis 29755]
Length = 431
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 84/443 (18%), Positives = 208/443 (46%), Gaps = 17/443 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EGL+R + V + ++++ + E+++ A + GFR GKVP S I+ YG
Sbjct: 1 MSISIETLEGLQRRVTVTVAADKIEAGYKEQLKGYAKNARVDGFRKGKVPHSIIEQRYGL 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + E ++ +++ A RP+ T N + D ++++
Sbjct: 61 AARQDVLSEEMQRAFFDVVIAEKINLAGRPTFTPN---------NYQPGQDFSFVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K F ++ D+VT+D+ S
Sbjct: 112 FPEVELKGLENIEVEKPVVEITEADLDKMVDVLRKQQATFAETTEAAKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKASDFVLAMGQGRMIPGFEEGIVGHKAGEQFDIDVIFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K+V + + + + + ++ +R + +++ + + +VK Q+++
Sbjct: 232 KFAIALKKVENIVLPELTEEFVKKFGSAKTVEELRVEIKKNMQRELKNALTTRVKNQVIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ +VP S V E + + Q+ + + + + + + AKRRV
Sbjct: 292 GLLANNDIEVPSSAVAEEVDVLRQQAVQRFGGKPEMAAQL------PAELFEVEAKRRVQ 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L ++ N ++V E ++ + + + ++++++ K P +R + E+
Sbjct: 346 VGLLLSSVITSNELKVDEARVKETISELASAY-EQPAEVVEYYAKNPRLTDNIRNVVLEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLF 442
+ ++ +L ++ ++ +FD++
Sbjct: 405 QAVEAVLAKAKVTEKASSFDEVM 427
>gi|172060889|ref|YP_001808541.1| trigger factor [Burkholderia ambifaria MC40-6]
gi|238689159|sp|B1YRZ6|TIG_BURA4 RecName: Full=Trigger factor; Short=TF
gi|171993406|gb|ACB64325.1| trigger factor [Burkholderia ambifaria MC40-6]
Length = 448
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 100/461 (21%), Positives = 216/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDTVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYSG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + +++ ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFEPKQEQAE---------DAYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V + + E
Sbjct: 112 YPEVKIGDLATAEVERSTTSIGDAEIDRTLDILRKQRVHYHARGEAGEHGDGGADTAAKN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + + ++ F++G + E +GLK G+Q+ + FP+D
Sbjct: 172 GDRVTVDFVGKIDDVAFQGGTAEDFPFVLGEGRMLPEFETAALGLKVGEQRTFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K++ P ++ + A LG E MR + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L SS++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASSQA 448
>gi|167562413|ref|ZP_02355329.1| trigger factor [Burkholderia oklahomensis EO147]
gi|167569596|ref|ZP_02362470.1| trigger factor [Burkholderia oklahomensis C6786]
Length = 448
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 102/461 (22%), Positives = 221/461 (47%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDVVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + ++ ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFEPKQDVAEGA---------YAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P+++I + +V + + + EIDR + + K V F + +T ++
Sbjct: 112 YPEVKIGDLEAAEVERSTTTIGDAEIDRTLDILRKQRVHFHARGEGGEHGDGGADTAAQN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + + ++ F++G + E +GLK G+ +E + FP+D
Sbjct: 172 GDRVTVDFVGKIDDVAFQGGTAEDFVFVLGEGRMLPEFETAALGLKAGESREFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ D A LG E MRG + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTVKKVEWPHLPAIDADFAKSLGIEDGDLTKMRGEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ + +
Sbjct: 292 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPV 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFADQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L ++++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFETLASATAQA 448
>gi|163731322|ref|ZP_02138769.1| trigger factor [Roseobacter litoralis Och 149]
gi|161394776|gb|EDQ19098.1| trigger factor [Roseobacter litoralis Och 149]
Length = 443
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 126/453 (27%), Positives = 240/453 (52%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 1 MQVTETLNEGLKRGYAIKVTAAELDAKVNEKLAEAQPEVEMKGFRKGKVPMALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E I + + + +R AM+P + + + + D+++ +SY+
Sbjct: 61 KVMGEAMQESIDGAMSDHFTACGDRPAMQPEVKMT-------NEDWKEGDDIEVSMSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I F +++ + + D+ ID + +A+ FE ++ +++ GD++ +D+
Sbjct: 114 LPDIPDVDFSTIELEKMTVKADDAAIDEALGNLAETAQNFESRKKGSKAKDGDQIVMDFL 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD+V + + ++ ++GS E LVG K GD+ + FPE++ ++LAGK
Sbjct: 174 GKVDDVAFDGGAAEDYPLVLGSNSFIPGFEEQLVGAKAGDETSVTVTFPENYQAENLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++KEV P+ ++++LA + G E +A++G +++++ R +KR +L
Sbjct: 234 EAVFECTVKEVKKPVAAEIDDELAKKFGAEDLAALKGQIAERLEAEYAGAARAIMKRSLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD+P SLV E I ++ E N + D + + LA+RRV
Sbjct: 294 DALDDIVDFDLPPSLVSAEAGQIAHQLWHE---ENPDVEGHDHPEITPTDEHTKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG+K +EVT+ EM A+ Q ++PG E++ + Q+ ++RAPIFE
Sbjct: 351 RLGLLLADIGQKAEVEVTDAEMSQAIMNQARQYPGQERQFFEFVQQNQQMQQQMRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+DH+ + ++ +++V+ D L E
Sbjct: 411 DKVVDHVFEGAKVAEKEVSKDDLQKAVEALEEE 443
>gi|37679287|ref|NP_933896.1| trigger factor [Vibrio vulnificus YJ016]
gi|41018163|sp|Q7MMG8|TIG_VIBVY RecName: Full=Trigger factor; Short=TF
gi|37198030|dbj|BAC93867.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Vibrio vulnificus
YJ016]
Length = 432
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 218/448 (48%), Gaps = 18/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E + DL ++++
Sbjct: 61 AVRQDILGEVMQRHFIEAIIKEKINPAGAPTFAPVEN---------KEGSDLVFNATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + +++ + + K + E +E G +V++D+ S
Sbjct: 112 YPEVELKGLENITVEKPAVEVKDADVEEMIETLRKQQATWTEVEEAAEAGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + + G G + EI+ FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIEGKTKGMEFEIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ + G A++ + +++ + V+ ++K Q +
Sbjct: 232 KFAIKVNKVEARQLPELNDEFVAKFGVAEGGIDALKAEVRKNMERELKQAVKNRIKEQAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + DVP +L++ E N + Q+ NV++ + + + AKRRV
Sbjct: 292 DGLVKENEIDVPAALIDQEINVLRQQAAQRFGG------NVEAAMQLPRELFEEQAKRRV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G++LG + + + ++V EE++++ + + + +++ ++++ + +R E
Sbjct: 346 VVGLLLGEVIKAHELKVDEEKVKAIITEMATAY-EDPTEVVTYYEQNEQMMNNMRNVALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ID I+ Q+ +++V+F++L + +
Sbjct: 405 EQAIDAIIAKAQVSEKEVSFNELMNQPA 432
>gi|115351963|ref|YP_773802.1| trigger factor [Burkholderia ambifaria AMMD]
gi|122322951|sp|Q0BEF5|TIG_BURCM RecName: Full=Trigger factor; Short=TF
gi|115281951|gb|ABI87468.1| trigger factor [Burkholderia ambifaria AMMD]
Length = 448
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 100/461 (21%), Positives = 216/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDTVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYSG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + +++ ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFEPKQEQAE---------DAYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V + + E
Sbjct: 112 YPEVKIGDLATAEVERSTTSIGDAEIDRTLDILRKQRVHYHARGEAGEHGDGGADTAAKD 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + + ++ F++G + E +GLK G+Q+ + FP+D
Sbjct: 172 GDRVTVDFVGKIDDVAFQGGTAEDFPFVLGEGRMLPEFETAALGLKVGEQRTFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K++ P ++ + A LG E MR + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L SS++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASSQA 448
>gi|294340354|emb|CAZ88735.1| putative Trigger factor (TF) [Thiomonas sp. 3As]
Length = 444
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 93/455 (20%), Positives = 193/455 (42%), Gaps = 25/455 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ + L+R + V +P + + N R++++ + GFRPGKVP+S + Y S+
Sbjct: 2 TVETLDKLQRRVTVTVPKAAVQNEINSRLKNLSRTLRLPGFRPGKVPMSMVTQRYAPSVE 61
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E + + I +I + R A P + + + +++ P
Sbjct: 62 MEVLQDKIGNAFYDIATSARLRVAGAPEFSPKTEGVEADV--------VAFDAVFEVYPD 113
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD-----------K 172
++I + + EVDE ID+ + + K F + + G +
Sbjct: 114 VQIPDLSTQAIERVTAEVDEAAIDKTIEVLRKQRTQFVTRGEAAPNGQTSEGLEVQDGDR 173
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
VTVD+ +D E + F+ G + E GL+ G K E FPED+
Sbjct: 174 VTVDFEGRIDGTAFEGGKAEGFTFVQGEGRMLPEFEAATKGLQAGQSKIFELHFPEDYQG 233
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVR 290
+ +AGK + + +V PL V+ D A LG E +R + + + +
Sbjct: 234 RAVAGKTAQFTLKVTQVEWPLLPEVDADFARALGVEDGDVQHLRDDIRSNLSREVKSRLT 293
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
Q+ K ++D + D+P +LV+NE N ++ R +++ K + + + +
Sbjct: 294 QRNKLAVMDLLQKAVAVDLPSALVQNEVNELMASARQDLAERGMKDADKAPL---PPELF 350
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A+RRV G+++ + ++++++ E++++ + + + + ++ + +A
Sbjct: 351 KEQAERRVRLGLIVSELVKQHDLQAKPEQVRAYVEELAASY-EQPQDLVRWYYADQERMA 409
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
+ A + E+ V D + Q D+ + FD+L +
Sbjct: 410 QAEAIVMENNVTDFVFAQAQTTDKSLGFDELMGQN 444
>gi|167836264|ref|ZP_02463147.1| trigger factor [Burkholderia thailandensis MSMB43]
Length = 449
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 101/461 (21%), Positives = 219/461 (47%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDVVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVTQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + ++ ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFAPKQDAAE--------EGAYAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P+++I +V + + + EIDR + + K V F + +T ++
Sbjct: 113 YPEVKIGDLAAAEVERSTTTIGDAEIDRTLDILRKQRVHFHARGEGGEHGDGGADTAAQN 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D V + + ++ F++G + E +GLK G+ +E + FP+D
Sbjct: 173 GDRVTVDFVGKIDGVAFQGGTAEDFVFVLGEGRMLPEFETAALGLKAGEPREFDLKFPDD 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ D + LG E MRG + +++ ++
Sbjct: 233 YHGKDVAGKTAQFTVTMKKVEWPHLPAIDADFSKSLGIEDGDLTKMRGEIKENLEREAKR 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ + +
Sbjct: 293 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPV 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 EMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L ++++
Sbjct: 409 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASATAQA 449
>gi|332305573|ref|YP_004433424.1| trigger factor [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172902|gb|AEE22156.1| trigger factor [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 436
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 89/448 (19%), Positives = 215/448 (47%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ + R++ + I GFRPGKVP+S IK YG+
Sbjct: 1 MQVSVETTQGLERRLTITVPAESIDSQVKSRLQQLAKTQRINGFRPGKVPVSVIKKRYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E E ++ E + + A P+ + DL+ ++++
Sbjct: 61 AVRQEIAGEAMQRNFYEAIVQEKITPAGMPNFEMKTDV---------DGQDLEFVAAFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + E+ + +++ M + K + ++ + + + D+VTVD+ +
Sbjct: 112 YPEVEVKDVEKIEVEKPVVEITDADLETMMETLRKQHATWKEVKRKCKKDDRVTVDFVGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N + +G + + +VG KTG++ + FPED+ + L GK+
Sbjct: 172 IDGEEFEGGKAENFELEMGKDRMIPGFEKPIVGAKTGEEVVADVTFPEDYHAEALKGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V+ + A G E A+ + +++ E ++ VK Q++
Sbjct: 232 QFKITVNKVEGLSLPKVDEEFAKLFGVEDGDVEALNTEVRKNMQRELEQTLKANVKEQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++P++LV+ E N + ++ + S NVD++ E + A++RV
Sbjct: 292 EGLLANNELELPKALVDQEINALREQAKQRFSQQQ--GGNVDNLPELPADLFQENARKRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + ++V ++ + L + ++++++++ + +++ E
Sbjct: 350 SIGLLLGEVIKTEELKVDSAKVDA-LIETAASAYEDPQEVIEYYKTNDELMQQMQNVALE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L + + FD++ + +
Sbjct: 409 EQAVEVLLSKANVKEVTKAFDEIMNKQA 436
>gi|186475775|ref|YP_001857245.1| trigger factor [Burkholderia phymatum STM815]
gi|238691289|sp|B2JGL4|TIG_BURP8 RecName: Full=Trigger factor; Short=TF
gi|184192234|gb|ACC70199.1| trigger factor [Burkholderia phymatum STM815]
Length = 448
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 95/461 (20%), Positives = 211/461 (45%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDAVQKEVDSRIRQLAKNVRMPGFRPGKVPLKMVTQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + + + +I + R A +PS + D ++++
Sbjct: 61 QVEAEVLSDKVGKQFFDISRAENLRVAGQPSFAPKADAVE---------GDYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++++ ++ + + + EIDR + + K V + + E
Sbjct: 112 YPEVKLGDVATAEIERTKTTISDAEIDRTLDILRKQRVHYHARGEAGEHGDGGADTAAKD 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D + + + F++G + E + +GLK G+ KE + FPED
Sbjct: 172 GDRVTVDFVGKIDGEAFQGGTADDFAFVLGEGRMLPEFEKAALGLKVGESKEFDLAFPED 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ K++AGK + ++K++ P ++ + A LG E MR +++ ++
Sbjct: 232 YHGKEVAGKTAQFAITMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRNEIRDNLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R ++ +
Sbjct: 292 RTQAVVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLVQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N ++ E++++ + + + K+++ +
Sbjct: 349 EMFAEQAERRVKLGLVLAELVKANELQAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F++L ++++
Sbjct: 408 RLAEMEAYVVESNVVDFVLSKAKVTDKEVSFEELASATAQA 448
>gi|262280901|ref|ZP_06058684.1| trigger factor septum formation molecular chaperone [Acinetobacter
calcoaceticus RUH2202]
gi|262257801|gb|EEY76536.1| trigger factor septum formation molecular chaperone [Acinetobacter
calcoaceticus RUH2202]
Length = 444
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 97/449 (21%), Positives = 213/449 (47%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ I GFRPGKVP + ++ YG
Sbjct: 1 MQVTTEAVSGVARRLNVSVPTSRINEQFEARLKRTAKTVKINGFRPGKVPENVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +++II++ V E + + A P+I E + D L + ++
Sbjct: 61 GIYQEVVNDIIRDSVFEAIQQEKINAVGMPNIDKVEHKEDA----------LVFEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + +FD L+V + E+ + ++D + + K + V + ++ +VT D+ +
Sbjct: 111 YPEVTVQAFDGLEVERKTAEIKDADVDAMIENLQKQRQTWAVTKGMAKKDMQVTFDFEGT 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S ++ + ++GS + + ++G+K G++K I+ FPED+ ++LAGK
Sbjct: 171 IDGEKFEGGSAEDFKLVLGSGRMIPGFEDGIIGMKAGEEKVIDVTFPEDYQAENLAGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K+V ++ + G E ++ + +++ +R +VK+
Sbjct: 231 QFKITVKQVEKSKLPEIDAEFLKIFGVTEEEGVEKLKADVRKNMEREVRNGLRNQVKQAA 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + +VP ++V E + Q++ + + + + A+R
Sbjct: 291 FDALVAANEVEVPTAMVAQEIDRQRQQMVQQFTQQFGGAGAQSFDKSMLPDELFKEQAER 350
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + +EV + + + + + +++++F+ A++ A +
Sbjct: 351 SVKLGVLVSKVLADAKLEVDQTRVDAYIDDMASSY-EDPTEVIEYFKNDAQQRAQIEAVV 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+DHIL + ++ D+ V++D L
Sbjct: 410 LEDQVVDHILAAAKVTDKPVSYDDLLKEQ 438
>gi|170733283|ref|YP_001765230.1| trigger factor [Burkholderia cenocepacia MC0-3]
gi|238688544|sp|B1JTV1|TIG_BURCC RecName: Full=Trigger factor; Short=TF
gi|169816525|gb|ACA91108.1| trigger factor [Burkholderia cenocepacia MC0-3]
Length = 448
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 99/461 (21%), Positives = 216/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + I GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDTVQKEIDARIQKLAKTVRIPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + + + R A +PS + +++ ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTVSRAENLRVAGQPSFEPKQEQAE---------DAYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V + + E
Sbjct: 112 YPEVKIGDLATAEVERSTTSIGDAEIDRTLDILRKQRVHYHARGEAGEHGDGGEDTAAKN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + + ++ F++G + E +GLK G+Q+ + FP+D
Sbjct: 172 GDRVTVDFVGKIDDVAFQGGTAEDFPFVLGEGRMLPEFETAALGLKVGEQRTFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K++ P ++ + A LG E MR + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 448
>gi|126735970|ref|ZP_01751714.1| trigger factor (TF), putative [Roseobacter sp. CCS2]
gi|126714527|gb|EBA11394.1| trigger factor (TF), putative [Roseobacter sp. CCS2]
Length = 443
Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats.
Identities = 126/453 (27%), Positives = 246/453 (54%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V E +EGLKR + + + L E++++ + +KGFR GKVP++ ++ +G+
Sbjct: 1 MKVTETLNEGLKRGYAITVTAAELDAKVEEKLKEAQPTVEMKGFRKGKVPMALLRKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E++ E I + L + +R A +P + + + + D+++ ++Y+
Sbjct: 61 RLMGESMQEAIDGALSSHLEETGDRPAAQPEMKMT-------NEDWKEGDDVQVDVTYEK 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV--AFEVKETESEIGDKVTVDYT 178
LP+IE F +++ + + + D+ + + +A++ ++ K+T+++ GD+V +D+
Sbjct: 114 LPEIEDVDFSKIKLERMVVKADKDSVKEALDNLAESPQAVDYQPKKTQAKDGDQVILDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + ++ ++GS + L+ +K GD+K++E FPED+ + LAGK
Sbjct: 174 GKVDGEPFEGGAAEDYPLVLGSNSFIPGFEDGLLKVKAGDEKDVEVTFPEDYQAEALAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
K + +IKEV +P ++++LA + G E A++ +++++ R KR +L
Sbjct: 234 KAVFSCTIKEVKAPKAPKMDDELAKKFGAEDLDALKAQITERLEAEYTGASRAVAKRGLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + K FD+P SLVE E N I ++ E N + D + + + + LA+RRV
Sbjct: 294 DTLDKKVKFDLPASLVEAESNQIAHQLWHE---ENPDVEGHDHPEIKPTKEHTKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG+K ++VT++EM A+ Q ++PG E++ + Q+ +L+AP+FE
Sbjct: 351 KLGLLLADIGQKAEVKVTDQEMTQAIMNQARQYPGQERQFFEFVQQNAQFRQQLQAPMFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+DHI + + D++V+ D L + E
Sbjct: 411 DKVVDHIFEQAVVKDKEVSKDDLQKAVEKLEEE 443
>gi|296136118|ref|YP_003643360.1| trigger factor [Thiomonas intermedia K12]
gi|295796240|gb|ADG31030.1| trigger factor [Thiomonas intermedia K12]
Length = 444
Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats.
Identities = 93/455 (20%), Positives = 193/455 (42%), Gaps = 25/455 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ + L+R + V +P + + N R++++ + GFRPGKVP+S + Y S+
Sbjct: 2 TVETLDKLQRRVTVTVPKAAVQNEINSRLKNLSRTLRLPGFRPGKVPMSMVTQRYAPSVE 61
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E + + I +I + R A P + + + +++ P
Sbjct: 62 MEVLQDKIGNAFYDIATSARLRVAGAPEFSPKTEGIEADV--------MAFDAVFEVYPD 113
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD-----------K 172
++I + + EVDE ID+ + + K F + + G +
Sbjct: 114 VQIPDLSTQAIERVTAEVDEAAIDKTIEVLRKQRTQFVTRGEAAPNGQTSEGLEVQDGDR 173
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
VTVD+ +D E + F+ G + E GL+ G K E FPED+
Sbjct: 174 VTVDFEGRIDGTAFEGGKAEGFTFVQGEGRMLPEFEAATKGLQAGQSKIFELHFPEDYQG 233
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVR 290
+ +AGK + + +V PL V+ D A LG E +R + + + +
Sbjct: 234 RAVAGKTAQFTLKVTQVEWPLLPEVDADFARALGVEDGDVQRLRDDIRSNLSREVKSRLT 293
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
Q+ K ++D + D+P +LV+NE N ++ R +++ K + + + +
Sbjct: 294 QRNKLAVMDLLQKAVAVDLPSALVQNEVNELMASARQDLAERGMKDADKAPL---PPELF 350
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A+RRV G+++ + ++++++ E++++ + + + + ++ + +A
Sbjct: 351 KEQAERRVRLGLIVSELVKQHDLQAKPEQVRAYVEELAASY-EQPQDLVRWYYADQERMA 409
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
+ A + E+ V D + Q D+ + FD+L +
Sbjct: 410 QAEAIVMENNVTDFVFAQAQTTDKSLGFDELMGQN 444
>gi|299771641|ref|YP_003733667.1| trigger factor [Acinetobacter sp. DR1]
gi|298701729|gb|ADI92294.1| trigger factor [Acinetobacter sp. DR1]
Length = 444
Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats.
Identities = 98/449 (21%), Positives = 212/449 (47%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ I GFRPGKVP + ++ YG
Sbjct: 1 MQVTTEAVSGVARRLNVSVPTSRINEQFEARLKRTAKTVKINGFRPGKVPENVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +++II++ V E + + A P+I E + D L + ++
Sbjct: 61 GIYQEVVNDIIRDSVFEAIQQEKINAVGMPNIDKVEHKEDA----------LVFEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + +FD L+V + E+ + ++D + + K + V + ++ +VT D+ +
Sbjct: 111 YPEVAVQAFDGLEVERKTAEIKDADVDAMIENLQKQRQTWAVTKGMAKKDMQVTFDFEGT 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S ++ + ++GS + + +VG+K G++K I+ FPED+ ++LAGK
Sbjct: 171 IDGEKFEGGSAEDFKLVLGSGRMIPGFEDGIVGMKAGEEKVIDVTFPEDYQAENLAGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K+V ++ + G E ++ + +++ +R +VK+
Sbjct: 231 QFKITVKQVEKSKLPEIDAEFLKIFGVTEEEGVEKLKADVRKNMEREVRNGLRNQVKQAA 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + +VP ++V E + Q++ + + + + A+R
Sbjct: 291 FDALVAANEVEVPTAMVAQEIDRQRQQMVQQFTQQFGGAGAQSFDKSMLPDELFKEQAER 350
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + +EV + + + + + +++++F+ A++ A +
Sbjct: 351 SVKLGVLVSKVLADAKLEVDQARVDAYIDDMASSY-EDPTEVIEYFKNDAQQRAQIEAVV 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+DHIL ++ D+ V++D L
Sbjct: 410 LEDQVVDHILAGAKVTDKAVSYDDLLKEQ 438
>gi|300311896|ref|YP_003775988.1| peptidyl-prolyl cis/trans isomerase [Herbaspirillum seropedicae
SmR1]
gi|124483354|emb|CAM32550.1| Peptidyl-prolyl cis/trans isomerase (trigger factor) protein
[Herbaspirillum seropedicae]
gi|300074681|gb|ADJ64080.1| peptidyl-prolyl cis/trans isomerase (trigger factor) protein
[Herbaspirillum seropedicae SmR1]
Length = 449
Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats.
Identities = 96/461 (20%), Positives = 209/461 (45%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L+R + + P + +R++ A GFRPGKVP+ + + +G
Sbjct: 1 MATAVETLSKLERRMTLSFPLADVQAEVEKRLKVRARTAKAPGFRPGKVPMKMVAAQFGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E +++ + + + + R A P I G L ++++
Sbjct: 61 QVETEVLNDKVGRAFNDAAVENNLRVAGFPRIEPKT-------SEEAGEGKLAFDATFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P++ + +V + V + EID+ + + K V + VK + ++
Sbjct: 114 YPEVTLGDLSGAEVEKTTASVSDAEIDKTIDILRKQRVHYHVKGEQGAHGDGGADQSAQN 173
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D V + + F++G + E +GLK G+ K FPED
Sbjct: 174 GDRVTVDFVGKIDGVEFQGGKAEAFPFVLGEGRMLPEFEAATIGLKVGESKTFPLAFPED 233
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK ++K++ V+ A LG E MR + +++
Sbjct: 234 YHGKDVAGKTAEFTITVKKIEWAHMPEVDAVFAQSLGIEDGDLTKMREDIKKNLEREVTA 293
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ K K +++ + +VP++L++ + + + R +M+ + + +
Sbjct: 294 RTKAKTKDSVMNALIKASELEVPKALIDQDVERLAEMARQDMAQRGMDPKGM----QLPK 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G++L + ++N +E TEE++++ + + +++L ++
Sbjct: 350 ELFTAQAERRVRLGLILAEVVKQNKLEATEEQVKAQIEDFAQSY-EDPQQVLKYYFSDRR 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E+ V++++L ++ ++ V+FD+L N +++
Sbjct: 409 RLAEVEALVLEENVVNYVLGKAKVSEKPVSFDELMGNQAQA 449
>gi|55670527|pdb|1W26|A Chain A, Trigger Factor In Complex With The Ribosome Forms A
Molecular Cradle For Nascent Proteins
gi|55670528|pdb|1W26|B Chain B, Trigger Factor In Complex With The Ribosome Forms A
Molecular Cradle For Nascent Proteins
gi|190613446|pdb|2VRH|A Chain A, Structure Of The E. Coli Trigger Factor Bound To A
Translating Ribosome
Length = 432
Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats.
Identities = 89/447 (19%), Positives = 200/447 (44%), Gaps = 18/447 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
QV + ++GL R + + I ++ + + + ++ K I GFR GKVP + + YG S
Sbjct: 2 QVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPXNIVAQRYGAS 61
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + + ++ + + K A P+ G + D + +++
Sbjct: 62 VRQDVLGDLXSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEVY 112
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++E+ + ++V + I EV + ++D + + K ++ K+ E D+VT+D+T SV
Sbjct: 113 PEVELQGLEAIEVEKPIVEVTDADVDGXLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSV 172
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D E + G + + G K G++ I+ FPE++ ++L GK +
Sbjct: 173 DGEEFEGGKASDFVLAXGQGRXIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAK 232
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++K+V + + R G E +R + ++ + +R +VK Q ++
Sbjct: 233 FAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNXERELKSAIRNRVKSQAIE 292
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ DVP +L+++E + + ++ N E + + AKRRV+
Sbjct: 293 GLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRVV 346
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++LG + N ++ EE ++ + + + K++++ + K R E+
Sbjct: 347 VGLLLGEVIRTNELKADEERVKGLIEEXASAY-EDPKEVIEFYSKNKELXDNXRNVALEE 405
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ ++ +L ++ +++ TF++L + +
Sbjct: 406 QAVEAVLAKAKVTEKETTFNELXNQQA 432
>gi|187923895|ref|YP_001895537.1| trigger factor [Burkholderia phytofirmans PsJN]
gi|238689606|sp|B2T3Z9|TIG_BURPP RecName: Full=Trigger factor; Short=TF
gi|187715089|gb|ACD16313.1| trigger factor [Burkholderia phytofirmans PsJN]
Length = 448
Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats.
Identities = 98/461 (21%), Positives = 209/461 (45%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDAVQKEVDSRIRQLAKNVRMPGFRPGKVPLKMVTQQYSG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + + + +I + R A +PS ++ D ++++
Sbjct: 61 QVEAEVLSDKVGKEFFDISRSENLRVAGQPSFAPKSDATE---------GDYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++++ ++ + + E EIDR + + K V F + E
Sbjct: 112 YPEVKLGDVATAEIERTTTTISEAEIDRTLDILRKQRVHFHARGEAGEHGDGGGDTAAKE 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ ++ + + S + F++G + E + GLK G+ KE + FPED
Sbjct: 172 GDRVTVDFVGKIEGEVFQGGSADDFAFVLGEGRMLPEFEKAATGLKVGESKEFDLAFPED 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K++ P ++ + A LG E MR +++ ++
Sbjct: 232 YHGKDVAGKTAQFTITMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKDNLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP +L+E + ++ R ++ +
Sbjct: 292 RTQAIVKNQVMDALLKISELDVPNALIEQDQERLVAMARQDLEQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A+RRV G+VL + + N ++ E++++ + + + K+++ +
Sbjct: 349 AMFKEQAERRVKLGLVLAELVKANELQAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F++L ++++
Sbjct: 408 RLAEMEAYVVEANVVDFVLSKAKVTDKEVSFEELASATAQA 448
>gi|77463713|ref|YP_353217.1| trigger factor [Rhodobacter sphaeroides 2.4.1]
gi|126462542|ref|YP_001043656.1| trigger factor [Rhodobacter sphaeroides ATCC 17029]
gi|332558564|ref|ZP_08412886.1| trigger factor [Rhodobacter sphaeroides WS8N]
gi|119370929|sp|Q3J1L8|TIG_RHOS4 RecName: Full=Trigger factor; Short=TF
gi|166229924|sp|A3PKL8|TIG_RHOS1 RecName: Full=Trigger factor; Short=TF
gi|77388131|gb|ABA79316.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Rhodobacter sphaeroides 2.4.1]
gi|126104206|gb|ABN76884.1| trigger factor [Rhodobacter sphaeroides ATCC 17029]
gi|332276276|gb|EGJ21591.1| trigger factor [Rhodobacter sphaeroides WS8N]
Length = 444
Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats.
Identities = 126/452 (27%), Positives = 227/452 (50%), Gaps = 11/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E EGLKR + + + L E++ + + +KGFR GKVPL+ +K +G
Sbjct: 1 MQVTETQKEGLKRAYTITVTAAELDAKVQEKLVEAQPDIEMKGFRKGKVPLAMLKKQFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L + + + I + + L +R AM+P + + +G + D+ + + Y+
Sbjct: 61 RLLGDAMQDAIDGAMRDHLETSGDRPAMQPEVRMVDG------ETWKEGTDVVVEMKYEA 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP+I + + + + + DE I+ + +A++ FE + +++ GD+V +D+
Sbjct: 115 LPEIPEIETSKVSLERLVVKADEAAIEEALKNLAESAQNFEDRRKGSKAKDGDQVVIDFK 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + E S ++ ++GS E LVG K D+ ++ FP ++ K LAGK
Sbjct: 175 GSVDGELFEGGSAEDYPLVLGSGSFIPGFEEQLVGTKVDDEVTVKVSFPAEYGAKHLAGK 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V +P ++++LA + G E +A++ S++++ + R +KR +L
Sbjct: 235 EAEFACTVKAVKAPKAAELDDELAKKYGAEDLAALKSQISERLEAEYKGASRAVLKRALL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +F++P LVE E + I ++ E + + E + LA+RRV
Sbjct: 295 DQLDQMVSFELPSKLVEAEAHQIAHQLWHEEHPE---EHGHNHGNIEPTDEHKALAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG K + VT+ EM A+ Q ++PG E+ + QK P +LRAPIFE
Sbjct: 352 RLGLLLAEIGRKAEVTVTDAEMTQAVLAQARQYPGQERAYFEFVQKNPQIQQQLRAPIFE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+D IL+ + +++V D L
Sbjct: 412 DKVVDLILEGATVTEKEVGKDDLQKAIEALDE 443
>gi|163742686|ref|ZP_02150071.1| trigger factor [Phaeobacter gallaeciensis 2.10]
gi|161383941|gb|EDQ08325.1| trigger factor [Phaeobacter gallaeciensis 2.10]
Length = 447
Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats.
Identities = 134/453 (29%), Positives = 243/453 (53%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 5 MQVTETLNEGLKRGYAITVTAAELDAKVNEKLVEAQPEVEMKGFRKGKVPMALLKKQFGQ 64
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E I + + + +R AM+P + + + + D+ + +SY+
Sbjct: 65 RLIGEAMQETIDGAMNKHFEESGDRPAMQPDVKMT-------NEDWKEGDDVNVEMSYEA 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP+I +++ + + + D+ +D +A +A+ FE +E +E GD+V +D+
Sbjct: 118 LPEIPEVDLSGVELEKLVVKADDAAVDEALANLAETAQDFEAREDGAAAEDGDQVVIDFV 177
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + + + +GS E LVG K G++K++ FPE++ + LAGK
Sbjct: 178 GKVDGEAFDGGAGDDYPLTLGSNSFIPGFEEQLVGTKAGEEKDVTVTFPEEYQAEHLAGK 237
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++KEV +P +N++LA + G E + ++G S++++ R +KR +L
Sbjct: 238 EAVFSCTVKEVKAPKAAEINDELAQKFGAEDLAGLKGQISERLEAEYAGAARAVMKRGLL 297
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +FD+P SLVE E I ++ E N + Q D + E ++ LA+RRV
Sbjct: 298 DKLDDLVSFDLPPSLVEAEAKQIAHQLWHE---ENPEVQGHDHDEIEATDEHNKLAERRV 354
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K +EVT+ EM A+ QQ ++PG E++ + Q+ +LRAPIFE
Sbjct: 355 RLGLLLAELGQKAEVEVTDAEMTQAIMQQARQYPGQERQFFEFIQQNAQMQQQLRAPIFE 414
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKVIDHI + ++ +++V+ D L E
Sbjct: 415 DKVIDHIAEQAKVDEKEVSKDDLQAAVEALEDE 447
>gi|169797268|ref|YP_001715061.1| trigger factor [Acinetobacter baumannii AYE]
gi|184156806|ref|YP_001845145.1| trigger factor [Acinetobacter baumannii ACICU]
gi|213155938|ref|YP_002317983.1| trigger factor [Acinetobacter baumannii AB0057]
gi|215484709|ref|YP_002326944.1| trigger factor [Acinetobacter baumannii AB307-0294]
gi|239500791|ref|ZP_04660101.1| trigger factor [Acinetobacter baumannii AB900]
gi|260556150|ref|ZP_05828369.1| trigger factor [Acinetobacter baumannii ATCC 19606]
gi|301346763|ref|ZP_07227504.1| trigger factor [Acinetobacter baumannii AB056]
gi|301512251|ref|ZP_07237488.1| trigger factor [Acinetobacter baumannii AB058]
gi|301594240|ref|ZP_07239248.1| trigger factor [Acinetobacter baumannii AB059]
gi|332851225|ref|ZP_08433298.1| trigger factor [Acinetobacter baumannii 6013150]
gi|332866079|ref|ZP_08436807.1| trigger factor [Acinetobacter baumannii 6013113]
gi|332873219|ref|ZP_08441176.1| trigger factor [Acinetobacter baumannii 6014059]
gi|226703989|sp|B7H094|TIG_ACIB3 RecName: Full=Trigger factor; Short=TF
gi|226703990|sp|B7I4X8|TIG_ACIB5 RecName: Full=Trigger factor; Short=TF
gi|238685490|sp|A3M1Y6|TIG_ACIBT RecName: Full=Trigger factor; Short=TF
gi|238688023|sp|B0V4R6|TIG_ACIBY RecName: Full=Trigger factor; Short=TF
gi|238691032|sp|B2I3C0|TIG_ACIBC RecName: Full=Trigger factor; Short=TF
gi|169150195|emb|CAM88089.1| trigger factor, molecular chaperone involved in septum formation
[Acinetobacter baumannii AYE]
gi|183208400|gb|ACC55798.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Acinetobacter baumannii ACICU]
gi|193076288|gb|ABO10930.2| trigger factor septum formation molecular chaperone [Acinetobacter
baumannii ATCC 17978]
gi|213055098|gb|ACJ40000.1| trigger factor [Acinetobacter baumannii AB0057]
gi|213987351|gb|ACJ57650.1| trigger factor [Acinetobacter baumannii AB307-0294]
gi|260410205|gb|EEX03504.1| trigger factor [Acinetobacter baumannii ATCC 19606]
gi|322506698|gb|ADX02152.1| Trigger factor [Acinetobacter baumannii 1656-2]
gi|323516572|gb|ADX90953.1| trigger factor [Acinetobacter baumannii TCDC-AB0715]
gi|332730105|gb|EGJ61432.1| trigger factor [Acinetobacter baumannii 6013150]
gi|332734825|gb|EGJ65918.1| trigger factor [Acinetobacter baumannii 6013113]
gi|332738731|gb|EGJ69601.1| trigger factor [Acinetobacter baumannii 6014059]
Length = 444
Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats.
Identities = 101/449 (22%), Positives = 216/449 (48%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ I GFRPGKVP + ++ YG
Sbjct: 1 MQVTTEAVSGVARRLNVSVPTSRINEQFEARLKRTAKTVKINGFRPGKVPANVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI E +++II++ V E + + A P+I E + D L + ++
Sbjct: 61 SIYQEVVNDIIRDSVFEAIQQEKINAVGMPNIEKVEHKEDA----------LVFEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +FD L+V + E+ + ++D + + K + V + ++ +VT D+ S
Sbjct: 111 YPEVEVKAFDGLEVERKTAEIKDADVDTMIENLQKQRQTWAVTKGMAKKDMQVTFDFEGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S ++ + ++GS + + ++G+K G++K I+ FPED+ ++LAGK
Sbjct: 171 IDGEKFEGGSAEDFKLVLGSGRMIPGFEDGIIGMKAGEEKVIDVTFPEDYQAENLAGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K+V P ++ + G E ++ + +++ +R +VK+
Sbjct: 231 QFKITVKQVEKPKLPEIDAEFLKIFGVSEEEGIEKLKADVRKNMEREVRNGLRNQVKQAA 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + +VP ++V E + Q++ + + + + A+R
Sbjct: 291 FDALVAANEIEVPAAMVAQEIDRQRQQMVQQFTQQFGGAGAQSFDKSMLPDELFKEQAER 350
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + +EV + + + + + +++++F+ A++ A +
Sbjct: 351 SVKLGVLVSKVLADAKLEVDQARVDAYIDDMASSY-EDPTEVIEYFKNDAQQRAQIEAVV 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+DHIL S ++ D+ V+++ L
Sbjct: 410 LEDQVVDHILASAKVTDKAVSYEDLLKEQ 438
>gi|165976936|ref|YP_001652529.1| trigger factor [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|190150836|ref|YP_001969361.1| trigger factor [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|303251674|ref|ZP_07337847.1| trigger factor [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307246423|ref|ZP_07528497.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|307253156|ref|ZP_07535035.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307257576|ref|ZP_07539337.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|307264186|ref|ZP_07545778.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|226738669|sp|B0BRA0|TIG_ACTPJ RecName: Full=Trigger factor; Short=TF
gi|238692350|sp|B3GYI8|TIG_ACTP7 RecName: Full=Trigger factor; Short=TF
gi|165877037|gb|ABY70085.1| trigger factor [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|189915967|gb|ACE62219.1| trigger factor [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|302649516|gb|EFL79699.1| trigger factor [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306852674|gb|EFM84905.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|306859369|gb|EFM91403.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306863924|gb|EFM95846.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306870477|gb|EFN02229.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 433
Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats.
Identities = 78/448 (17%), Positives = 212/448 (47%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EGL+R + + + ++++ ++ E+++ A + GFR GKVP + I+ +G
Sbjct: 1 MSISIETLEGLQRRVTITVAADKIEAAYKEQLKGYAKNARVDGFRKGKVPHAIIEQRFGL 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + + ++ + + A RP+ T N + + + ++++
Sbjct: 61 AARQDVLSDEMQRAFFDAVIAEKINLAGRPTFTPN---------NYQPSQEFSFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K + + ++ D+V +D+ S
Sbjct: 112 FPEVELKGLENIEVEKPVVEITEADLDKMIDVLRKQQATWAESQAAAQAEDRVVIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + E +VG K G+Q +I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFTLAMGQSRMIPGFEEGIVGHKAGEQFDIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K+V + + + + + ++ +R + +++ + V +VK Q+++
Sbjct: 232 KFAITLKKVENIVLPELTEEFVKKFGSAKTVEDLRAEIKKNMQRELKNAVTARVKNQVIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + +VP + V E + + ++ + + + + + AKRRV
Sbjct: 292 GLIAQNEIEVPAAAVAEEVDVLRRQAVQRFGGKPEMAAQL------PAELFEADAKRRVQ 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L T+ N ++V E+ ++ + + + +++ H+ K +R + E+
Sbjct: 346 VGLLLSTVIGTNELKVDEKRVEETIAEIASAY-EQPAEVVAHYAKNRQLTENIRNVVLEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +L ++ ++ +FD++ ++
Sbjct: 405 QAVEVVLAKAKVTEKATSFDEVMAQQAQ 432
>gi|169634427|ref|YP_001708163.1| trigger factor [Acinetobacter baumannii SDF]
gi|238688112|sp|B0VKU6|TIG_ACIBS RecName: Full=Trigger factor; Short=TF
gi|169153219|emb|CAP02315.1| trigger factor, molecular chaperone involved in septum formation
[Acinetobacter baumannii]
Length = 444
Score = 244 bits (621), Expect = 3e-62, Method: Composition-based stats.
Identities = 101/449 (22%), Positives = 216/449 (48%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ I GFRPGKVP + ++ YG
Sbjct: 1 MQVTTEAVSGVARRLNVSVPTSRINEQFEARLKRTAKTVKINGFRPGKVPANVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI E +++II++ V E + + A P+I E + D L + ++
Sbjct: 61 SIYQEVVNDIIRDSVFEAIQQEKINAVGTPNIEKVEHKEDA----------LVFEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +FD L+V + E+ + ++D + + K + V + ++ +VT D+ S
Sbjct: 111 YPEVEVKAFDGLEVERKTAEIKDADVDTMIENLQKQRQTWAVTKGMAKKDMQVTFDFEGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S ++ + ++GS + + ++G+K G++K I+ FPED+ ++LAGK
Sbjct: 171 IDGEKFEGGSAEDFKLVLGSGRMIPGFEDGIIGMKAGEEKVIDVTFPEDYQAENLAGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K+V P ++ + G E ++ + +++ +R +VK+
Sbjct: 231 QFKITVKQVEKPKLPEIDAEFLKIFGVSEEEGIEKLKADVRKNMEREVRNGLRNQVKQAA 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + +VP ++V E + Q++ + + + + A+R
Sbjct: 291 FDALVAANEIEVPAAMVAQEIDRQRQQMVQQFTQQFGGAGAQSFDKSMLPDELFKEQAER 350
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + +EV + + + + + +++++F+ A++ A +
Sbjct: 351 SVKLGVLVSKVLADAKLEVDQARVDAYIDDMASSY-EDPTEVIEYFKNDAQQRAQIEAVV 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+DHIL S ++ D+ V+++ L
Sbjct: 410 LEDQVVDHILASAKVTDKAVSYEDLLKEQ 438
>gi|163736687|ref|ZP_02144106.1| trigger factor [Phaeobacter gallaeciensis BS107]
gi|161390557|gb|EDQ14907.1| trigger factor [Phaeobacter gallaeciensis BS107]
Length = 443
Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats.
Identities = 134/453 (29%), Positives = 243/453 (53%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 1 MQVTETLNEGLKRGYAITVTAAELDAKVNEKLVEAQPEVEMKGFRKGKVPMALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E I + + + +R AM+P + + + + D+ + +SY+
Sbjct: 61 RLIGEAMQETIDGAMNKHFEESGDRPAMQPDVKMT-------NEDWKEGDDVNVEMSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP+I +++ + + + D+ +D +A +A+ FE +E +E GD+V +D+
Sbjct: 114 LPEIPEVDLSGVELEKLVVKADDAAVDEALANLAETAQDFEAREDGAAAEDGDQVVIDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + + + +GS E LVG K G++K++ FPE++ + LAGK
Sbjct: 174 GKVDGEAFDGGAGDDYPLTLGSNSFIPGFEEQLVGTKAGEEKDVTVTFPEEYQAEHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++KEV +P +N++LA + G E + ++G S++++ R +KR +L
Sbjct: 234 EAVFSCTVKEVKAPKAAEINDELAQKFGAEDLAGLKGQISERLEAEYAGAARAVMKRGLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +FD+P SLVE E I ++ E N + Q D + E ++ LA+RRV
Sbjct: 294 DKLDDLVSFDLPPSLVEAEAKQIAHQLWHE---ENPEVQGHDHDEIEATDEHNKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K +EVT+ EM A+ QQ ++PG E++ + Q+ +LRAPIFE
Sbjct: 351 RLGLLLAELGQKAEVEVTDAEMTQAIMQQARQYPGQERQFFEFIQQNAQMQQQLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKVIDHI + ++ +++V+ D L E
Sbjct: 411 DKVIDHIAEQAKVDEKEVSKDDLQAAVEALEDE 443
>gi|107028897|ref|YP_625992.1| trigger factor [Burkholderia cenocepacia AU 1054]
gi|116689945|ref|YP_835568.1| trigger factor [Burkholderia cenocepacia HI2424]
gi|118574063|sp|Q1BH86|TIG_BURCA RecName: Full=Trigger factor; Short=TF
gi|166229020|sp|A0K848|TIG_BURCH RecName: Full=Trigger factor; Short=TF
gi|105898061|gb|ABF81019.1| trigger factor [Burkholderia cenocepacia AU 1054]
gi|116648034|gb|ABK08675.1| trigger factor [Burkholderia cenocepacia HI2424]
Length = 448
Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats.
Identities = 97/461 (21%), Positives = 216/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDTVQKEIDARIQKLAKTVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + + + R A +PS + +++ ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTVSRAENLRVAGQPSFEPKQEQAE---------DAYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V + + E
Sbjct: 112 YPEVKIGDLATAEVERSTTSIGDAEIDRTLDILRKQRVHYHARGEAGEHGDGGADTAAKN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +++V + + ++ F++G + E +GLK G+Q+ + FP+D
Sbjct: 172 GDRVTVDFVGKIEDVAFQGGTAEDFPFVLGEGRMLPEFETAALGLKVGEQRTFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K++ P ++ + A LG E MR + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 448
>gi|260549099|ref|ZP_05823320.1| trigger factor septum formation molecular chaperone [Acinetobacter
sp. RUH2624]
gi|260407827|gb|EEX01299.1| trigger factor septum formation molecular chaperone [Acinetobacter
sp. RUH2624]
Length = 444
Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats.
Identities = 100/449 (22%), Positives = 216/449 (48%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ I GFRPGKVP + ++ YG
Sbjct: 1 MQVTTEAVSGVARRLNVSVPTSRINEQFEARLKRTAKTVKINGFRPGKVPANVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI E +++II++ V E + + A P+I E + D L + ++
Sbjct: 61 SIYQEVVNDIIRDSVFEAIQQEKINAVGMPNIEKVEHKEDA----------LVFEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +FD L+V + E+ + ++D + + K + V + ++ +VT D+ S
Sbjct: 111 YPEVEVKAFDGLEVERKTAEIKDADVDTMIENLQKQRQTWAVTKGMAKKDMQVTFDFEGS 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S ++ + ++GS + + ++G+K G++K I+ FPED+ ++LAGK
Sbjct: 171 IDGEKFEGGSAEDFKLVLGSGRMIPGFEDGIIGMKAGEEKVIDVTFPEDYQAENLAGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K+V P ++ + G E ++ + +++ +R +VK+
Sbjct: 231 QFKITVKQVEKPKLPEIDAEFLKIFGVTEEEGIEKLKADVRKNMEREVRNGLRNQVKQAA 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + +VP ++V E + Q++ + + + + A+R
Sbjct: 291 FDALVAANEVEVPAAMVAQEIDRQRQQMVQQFTQQFGGAGAQSFDKSMLPDELFKEQAER 350
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + +EV + + + + + +++++F+ A++ A +
Sbjct: 351 SVKLGVLVSKVLADAKLEVDQSRVDAYIDDMASSY-EDPTEVIEYFKNDAQQRAQIEAVV 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+DHIL + ++ D+ V+++ L
Sbjct: 410 LEDQVVDHILAAAKVTDKAVSYEDLLKEQ 438
>gi|110834070|ref|YP_692929.1| trigger factor protein [Alcanivorax borkumensis SK2]
gi|118574058|sp|Q0VQ91|TIG_ALCBS RecName: Full=Trigger factor; Short=TF
gi|110647181|emb|CAL16657.1| trigger factor protein [Alcanivorax borkumensis SK2]
Length = 437
Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats.
Identities = 96/451 (21%), Positives = 220/451 (48%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + GL+R + V +P+ ++ + ++++ + + GFRPGKVP+ +K +G
Sbjct: 1 MQVSVETTSGLERRVTVGVPAEKVDVAVEGKLQEAQKTIRLDGFRPGKVPMREVKRRFGG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ +E + ++++E E + + + A P E DL+ ++++
Sbjct: 61 AVRNEVLADVMREAFIEAVEQEKLQPAGMPGFEATTN---------EAGKDLEFVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
PQ+E+++FD ++V + EV + ++D + + + F + SEIGD+V +D+
Sbjct: 112 YPQVELAAFDSIEVEKPQSEVTDADVDTMIETLRQQRAEFADVDRASEIGDRVNIDFKGL 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + + +GS + + +VG+K G++K+I+ FPED+ +DL G+ V
Sbjct: 172 KDGEAFEGGTAEGQNLELGSGQMIPGFEDGIVGMKAGEEKDIDVTFPEDYQSEDLKGQAV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V V+ + G + E+ + + +++ + + KVK Q +
Sbjct: 232 VFHIKVNKVEGKALPEVDAEFMKGFGVDDGDETKFKAEVRKNMERELKNAITSKVKEQAM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N + FD+P +LV E + Q++ + Q ++ + A+R V
Sbjct: 292 DGLVNLHEFDLPGALVTQEIQRMRQQMMQQFGGGQQFDPSIL-----PDDLFKEQAERSV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+V+ I +KN I+ +++++ + + ++ ++++ P L ++ I E
Sbjct: 347 RLGLVVRAILDKNEIKADADKVKARVEEISEQY-EKPEEVVSWVYSNPQQLQQIEGAILE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
++V+D +L+S ++ ++ + + ++
Sbjct: 406 EQVVDLVLESAKVEEKTMPYQDAVKPREQAD 436
>gi|307255407|ref|ZP_07537215.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307259858|ref|ZP_07541573.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|306861636|gb|EFM93622.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306866069|gb|EFM97942.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
Length = 433
Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats.
Identities = 78/448 (17%), Positives = 212/448 (47%), Gaps = 17/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EGL+R + + + ++++ ++ E+++ A + GFR GKVP + I+ +G
Sbjct: 1 MSISIETLEGLQRRVTITVAADKIEAAYKEQLKGYAKNARVDGFRKGKVPHAIIEQRFGL 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + + ++ + + A RP+ T N + + + ++++
Sbjct: 61 AARQDVLSDEMQRAFFDAVIAEKINLAGRPTFTPN---------NYQPSQEFSFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++++V + + E+ E ++D+ + + K + + ++ D+V +D+ S
Sbjct: 112 FPEVELKGLENIEVEKPVVEITEADLDKMIDVLRKQQATWAESQAAAQAEDRVVIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + + E +VG K G+Q +I+ FPE++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFTLAMGQSRMIPGFEEGIVGHKAGEQFDIDVTFPEEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K+V + + + + + ++ +R + +++ + V +VK Q+++
Sbjct: 232 KFAITLKKVENIVLPELTEEFVKKFGSAKTVEDLRVEIKKNMQRELKNAVTARVKNQVIN 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + +VP + V E + + ++ + + + + + AKRRV
Sbjct: 292 GLIAQNEIEVPAAAVAEEVDVLRRQAVQRFGGKPEMAAQL------PAELFEADAKRRVQ 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L T+ N ++V E+ ++ + + + +++ H+ K +R + E+
Sbjct: 346 VGLLLSTVIGTNELKVDEKRVEETIAEIASAY-EQPAEVVAHYAKNRQLTENIRNVVLEE 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +L ++ ++ +FD++ ++
Sbjct: 405 QAVEVVLAKAKVTEKATSFDEVMAQQAQ 432
>gi|307544935|ref|YP_003897414.1| trigger factor [Halomonas elongata DSM 2581]
gi|307216959|emb|CBV42229.1| trigger factor [Halomonas elongata DSM 2581]
Length = 451
Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats.
Identities = 93/444 (20%), Positives = 218/444 (49%), Gaps = 17/444 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++R + V +P+ + ++ R++D + GFR GKVP+S I+ YG
Sbjct: 1 MQVSVDTTSQIERRVKVQVPAAEIDEAVAARLKDAAKTVRMDGFRKGKVPMSVIRQRYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + E+++E ++ + A P I + + E DL+ + ++
Sbjct: 61 EVRNEVVGEVMRERYVRAITDENLNPAGYPQIE---------ADVNEAGKDLEFTATLEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+SS + +V + + EV + ++ + + K N +E E +E GD++T+D+
Sbjct: 112 YPEVELSSIEGTEVERPVVEVSDDDVAEMIETLRKQNANWEEVERAAEDGDQLTIDFQGY 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + E S + + ++GS E L+G K GD KE++ FPED+ + LAG++
Sbjct: 172 LGDEPFEGGSAEGHELVIGSGSFIPGFEEQLIGAKAGDDKELKVTFPEDYQAEQLAGQEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ V + V+ + + G + R S+ + + +E V +VK+Q+L
Sbjct: 232 TFKVKVHTVKTQALPEVDAEFVKQFGVDDGDLDKFREEISKNMAREAEQAVDNRVKQQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP++L++ E +G+ ++ + + + + + AK RV
Sbjct: 292 EALKKANDIPVPQALIQQETDGLKRQAAQQFGLGEDFD-----VSQLPDELFAEQAKSRV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + + N ++ +++E+++ + + ++ +++++++ ++++ I E
Sbjct: 347 QIGLLLAEVIKVNELDASDDEIKAKVEELAQQY-QEPEQVVEYYMGNDQMKDQVKSAILE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLF 442
+K +D +L+ + D ++++ +
Sbjct: 406 EKAVDVLLEQASVKDVEMSYQEAL 429
>gi|254460630|ref|ZP_05074046.1| trigger factor [Rhodobacterales bacterium HTCC2083]
gi|206677219|gb|EDZ41706.1| trigger factor [Rhodobacteraceae bacterium HTCC2083]
Length = 444
Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats.
Identities = 132/453 (29%), Positives = 242/453 (53%), Gaps = 11/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + I + L NE++E+ R + +KGFR GKVP+ +K +G+
Sbjct: 1 MQVTETLNEGLKRGYSITIAAAELETKVNEKLEEARPEVEMKGFRKGKVPMPLLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
IL E + E + + E K +R A++P +T+ +G + D+ + +SY+
Sbjct: 61 RILGEAMQEAVDGAMSEHFEKSGDRPALQPEVTMVDG------ETWKEGDDVNVTMSYEA 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP+I +++ + + + D+ +D +A +A+ F ++ +++ GD+VT+D+
Sbjct: 115 LPEIPEVDLSKIELERLVAKADDASVDEALANLAETAQDFNDRKKGSKAKDGDQVTMDFL 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + ++ ++GS E LVG+K + K++ FP+ + + LAGK
Sbjct: 175 GKVDGEAFEGGAGEDFPLVLGSNQFIPGFEEQLVGVKAEEVKDVTVTFPDPYQAEHLAGK 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +IK V P+ VN++LA + G E +A++ +++++ R +KR +L
Sbjct: 235 EAIFTCTIKAVKEPVAAEVNDELATKFGAEDLAALKVQIAERLEAEYTGAARAVMKRGLL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +FD+P SLV E + I ++ E N + + D E + LA+RRV
Sbjct: 295 DKLDDVVSFDLPPSLVTAESDQIAHQLWHE---ENPEVEGHDHPTIEATDEHKSLAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K ++VT+ EM A+ Q ++PG E++ + Q+ ++RAPIFE
Sbjct: 352 RLGLLLAELGQKAEVQVTDAEMTQAMMNQARQYPGQEREFFEFVQQNQQMQQQMRAPIFE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+D+I++ Q+ D++++ D L E
Sbjct: 412 DKVVDYIVELAQVTDKEISKDDLQKAVEALEEE 444
>gi|261855006|ref|YP_003262289.1| trigger factor [Halothiobacillus neapolitanus c2]
gi|261835475|gb|ACX95242.1| trigger factor [Halothiobacillus neapolitanus c2]
Length = 432
Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats.
Identities = 83/449 (18%), Positives = 208/449 (46%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + SEGL R L + +P++ + + RI+D+ + + GFRPGK PL ++ Y
Sbjct: 1 MQVELQSSEGLIRRLAIEVPASEIDVEVDRRIKDMSRRVRLDGFRPGKAPLPVVRQRYEG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + +++ ++++ R A P I + + +LK + ++
Sbjct: 61 QVREEVVGDVMGRNYQAAIAEQQLRPAGNPVIESVDA---------QPGTNLKFVAAIEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ EI +++ EV + ++ ++ + + + ++ + ++ GD+VTV++
Sbjct: 112 YPEFEIGDLSVIEIETTTAEVTDADVADMLSTLREQHADWQNVDRAAKDGDRVTVNFAGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD-QKEIERFFPEDHSIKDLAGKK 239
VD + S + +Q ++G + ++ + L G+ G+ ++ + FPED+ +++L GK
Sbjct: 172 VDGEAFQGGSGEGMQVVLGEKRMLADFEKGLAGIAVGEPERVFDVAFPEDYPVENLQGKT 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + V + +N++ A R G + + + + +++ + +++ K +L
Sbjct: 232 AQFTVTATAVEEKVLPELNDEFAARFGSATVAELESDVRKNMERELKQALKRHTKDVVLT 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+++ TFDVP++LV+ E + + + ++D A +RV
Sbjct: 292 AVTDSLTFDVPKALVDEEAVVMRDGFVRQ----QMPHADASALDAGLFSE---QAAKRVK 344
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G+V+ I + +++V + + + + +++ ++ ++ R + E
Sbjct: 345 MGLVIMEIVKSADLQVDDALVDEFINDIAAAY-DEPDQVVATYKGDREMMSNARTVVLEQ 403
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSES 448
+ +DH+L ++ + F + + + ++
Sbjct: 404 QAVDHVLSKAKVTQKSQDFKSVMNPAPQA 432
>gi|149376713|ref|ZP_01894471.1| trigger factor [Marinobacter algicola DG893]
gi|149358952|gb|EDM47418.1| trigger factor [Marinobacter algicola DG893]
Length = 434
Score = 243 bits (619), Expect = 5e-62, Method: Composition-based stats.
Identities = 94/450 (20%), Positives = 211/450 (46%), Gaps = 19/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + ++R + + +P+ + + +R+++ + GFRPGKVP+ +K +G
Sbjct: 1 MQVSVETTSNIERRMTIGVPAQEIDQAVQKRLQETARTVKMNGFRPGKVPMRVVKRRFGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E + E++++ + L ++D A P E DL+ +++
Sbjct: 61 SVRQEIVGEVMRDNYIKALQEQDINPAGWPKFEPKTM---------EEGKDLEFVAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP++E+ F + V + E+ +K++D + + + + + +S+ D V +D+ +
Sbjct: 112 LPEVELGDFSKISVEKPKAEIADKDVDTMIDNLRRQQATMKSVKRKSKNKDVVLIDFKGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +N + +GS + + +VG K G++ EIE FPED+ +DLAGK
Sbjct: 172 VDGEEFEGGAAENHKLTLGSGQMIPGFEKGIVGGKAGEELEIEVTFPEDYQNEDLAGKPA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + I +V P ++ + + G E E R + +++ + V KVK ++
Sbjct: 232 KFDIKIHDVQEPQLPELDAEFFKKFGIDAEDEGTFREEVQKNMERELKQAVSNKVKNDVV 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +VP +LV+ E + + Q + + + A+RRV
Sbjct: 292 EGLLESTELEVPTALVDQEIDRLRQDAVQRFGGQ-------VDFQQLPKEIFEEQARRRV 344
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
TG++ + ++N+++ ++ + + + ++++ HF P ++ + + E
Sbjct: 345 KTGLLFQEVVKQNDLKADPAKVDEKIQEIASTY-EQPEEVVAHFNSSPEQKQQIESSVLE 403
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
D V+D IL ++ ++K+ +++ +
Sbjct: 404 DAVVDLILDQAKVKEKKLKYEEAIQAGQQQ 433
>gi|325518990|gb|EGC98513.1| trigger factor [Burkholderia sp. TJI49]
Length = 448
Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats.
Identities = 101/461 (21%), Positives = 219/461 (47%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKETVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + +++ ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFAPKQEQAE---------DAYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P+++I +V + + + EIDR + + K V + + +T ++
Sbjct: 112 YPEVKIGDLATAEVERSTTTIGDAEIDRTLDILRKQRVHYHARGEGGEHGDGGADTSAQN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + + ++ F++G + E + +GLK G+ + + FPED
Sbjct: 172 GDRVTVDFVGKIDDVAFQGGTAEDFPFVLGEGRMLPEFEKAALGLKAGESRTFDLAFPED 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ + A LG E MR + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKVEWPHLPEIDAEFAKSLGIEDGDLAKMRSEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + NN+E E++++ + + + K+++ +
Sbjct: 349 EMFTEQAERRVKLGLVLAELVKANNLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 448
>gi|237747780|ref|ZP_04578260.1| peptidyl-prolyl cis/trans isomerase [Oxalobacter formigenes OXCC13]
gi|229379142|gb|EEO29233.1| peptidyl-prolyl cis/trans isomerase [Oxalobacter formigenes OXCC13]
Length = 447
Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats.
Identities = 100/458 (21%), Positives = 214/458 (46%), Gaps = 25/458 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E L+R L V IP +T +R++ A GFR GKVP+ + S+YG
Sbjct: 1 MANAVETLEKLERRLTVSIPVADITTEVEKRLKVRARTAKASGFRQGKVPMDMVASMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++ ++E I + + + + R A P G ++ ++++
Sbjct: 61 GIQNDVLNEKISSAFSKAVEENNLRVAGYPKFEEKT-------GDDVSKDEIAFTATFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +++ + + V + E+D+ + + K F VK + E
Sbjct: 114 YPEVKIGDLAKVELEKAVATVTDAEVDKTLDILRKRQAHFHVKGEDGEHGKGGDDVSAQD 173
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VT+D+T +D V E ++ F++G + E + G+K G+ K FPED
Sbjct: 174 GDRVTIDFTGRIDGVEFEGGKAEDFPFVLGEKQMLPEFENAIRGMKVGETKVFPLAFPED 233
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEF 287
+ KD+AGK ++K++ +++ A LG + + +R +++ +
Sbjct: 234 YHGKDVAGKTAEFTVTVKKIEWSHLPELDDAFAQALGIKEGGVAKLREDIRTNLEREVKN 293
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ K +++D + + FD+P++LV+ E + +++ R ++S N +++ E
Sbjct: 294 RLISINKNRVMDALIDVSEFDIPQALVKQETDQLIEMTRHDLSVRNPAQKDIALPPELFA 353
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
A++RV G++LG + + N + V+ ++++ + + + + ++D++ P
Sbjct: 354 A----QAEKRVRLGMLLGELIKDNILAVSADKLKERATEIAASY-ENPQMVIDYYLNDPG 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
EL A I E+ +D++ ++ D+ V F++L +
Sbjct: 409 RRRELEAMIMEENAVDYVFGKAKVTDKAVPFEELMNQP 446
>gi|325124451|gb|ADY83974.1| trigger factor [Acinetobacter calcoaceticus PHEA-2]
Length = 444
Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats.
Identities = 100/449 (22%), Positives = 214/449 (47%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ I GFRPGKVP + ++ YG
Sbjct: 1 MQVTTEAVSGVARRLNVSVPTSRINEQFEARLKRTAKTVKINGFRPGKVPENVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI E +++II++ V E + + A P+I E + D L + ++
Sbjct: 61 SIYQEVVNDIIRDSVFEAIQQEKINAVGMPNIEKVEHKEDA----------LVFEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +FD L+V + E+ + ++D + + K + V + ++ +VT D+ +
Sbjct: 111 YPEVEVKAFDGLEVERKSAEIKDADVDAMIENLQKQRQTWAVTKGMAKKDMQVTFDFEGT 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S +N + ++GS + + ++G+K G++K I+ FPED+ ++LAGK
Sbjct: 171 IDGEKFEGGSAENFKLVLGSGRMIPGFEDGIIGMKAGEEKVIDVTFPEDYQAENLAGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K+V ++ + G E ++ + +++ +R +VK+
Sbjct: 231 QFKITVKQVEKSKLPEIDAEFLKIFGVTEEEGVEKLKADVRKNMEREVRNGLRNQVKQAA 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + +VP ++V E + Q++ + + + + A+R
Sbjct: 291 FDALVAANEVEVPTAMVAQEIDRQRQQMVQQFTQQFGGAGAQSFDKSMLPDELFKEQAER 350
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + +EV + + + + + +++++F+ A++ A +
Sbjct: 351 SVKLGVLVSKVLADAKLEVDQARVDAYIDDMASSY-EDPTEVIEYFKNDAQQRAQIEAVV 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+DHIL ++ D+ V++D L
Sbjct: 410 LEDQVVDHILAGAKVTDKAVSYDDLLKEQ 438
>gi|312796431|ref|YP_004029353.1| Trigger factor, ppiase [Burkholderia rhizoxinica HKI 454]
gi|312168206|emb|CBW75209.1| Trigger factor, ppiase (EC 5.2.1.8) [Burkholderia rhizoxinica HKI
454]
Length = 451
Score = 242 bits (618), Expect = 7e-62, Method: Composition-based stats.
Identities = 93/463 (20%), Positives = 205/463 (44%), Gaps = 25/463 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + RI + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKEVVQKEIDARIRKLAKNVRMPGFRPGKVPLKMVTQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + ++ + R A +PS + + ++++
Sbjct: 61 QVEAEVLSDKIGKAFFDVSRAENLRVAGQPSFAAKQEPA--------QGDAYAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++++ ++ + + + EIDR + + K V F + E
Sbjct: 113 YPEVKLGDISSAEIERTTTTISDAEIDRTLEILRKQRVHFHPRGEAGEHGTGGDDVSAQS 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D S ++ F++G + E + +GLK G+ +E + FP+D
Sbjct: 173 GDRVTVDFVGKIDGEAFAGGSAQDFAFVLGEGRMLPEFEQAALGLKAGESREFDLKFPDD 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ K++AGK R + K+V P ++ + A LG MR +++ ++
Sbjct: 233 YQGKEVAGKTARFTITAKKVEWPHQPEIDTEFAKSLGIADGDLAKMRAEIKDNLEREAKR 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ +K Q++D + D P +L+E + +++ R +++
Sbjct: 293 RTQAILKNQVMDALLKLAELDAPTALIEQDQQRLVEMARQDLAQRGVPDAAKA---PIPA 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G++L + +++ +E E++++ + + + K+++ +
Sbjct: 350 EMFKEQAERRVKLGLILAELVKEHKLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
LAE+ A + E V+D +L ++ D++V F++L + S +
Sbjct: 409 RLAEMEAYVVESNVVDFVLGKAKVTDKEVGFEELANASQAAQA 451
>gi|171704550|sp|A1B0F4|TIG_PARDP RecName: Full=Trigger factor; Short=TF
Length = 444
Score = 242 bits (618), Expect = 8e-62, Method: Composition-based stats.
Identities = 135/445 (30%), Positives = 245/445 (55%), Gaps = 11/445 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + +P+ L + ++++ + + +KGFR GKVP++ +K +G+
Sbjct: 1 MQVKETQNEGLKRGYEFTLPAADLAAQVDAKLKEAQPEVEMKGFRKGKVPMALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I+ + + E I + + + L K +R A++P I + + + D+ + ++Y+
Sbjct: 61 RIMGDAMQEAIDKALRDHLEKSGDRPALQPKIEM------VNGETWKEGDDVVVTVAYEA 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I + +++ + + E E+++ + +AKN +FE ++ +++ GD++ +D+
Sbjct: 115 LPAIPEADLSGVELERLVVEASEEQVTEALENLAKNAQSFEDRKKGTKAKDGDQIVIDFK 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E S ++ ++GS E LVG K GD+ ++E FPED+ LAGK
Sbjct: 175 GMVDGEAFEGGSAEDYPLVLGSKSFIPGFEEQLVGAKAGDEVKVEVKFPEDYGHPALAGK 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K V +P ++++LA + G ES A++G ++++ + RQ +KR +L
Sbjct: 235 DAVFETTVKAVKAPKAAEIDDELAKKFGAESLDALKGQIRERLEAEYKGASRQVLKRTLL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + FD+PESLVE E + I ++ E + + E + LA+RRV
Sbjct: 295 DRLDEMVKFDLPESLVEAEAHQIAHQLWHEEHPE---EHGHNHGEIEPTDEHKKLAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG+K I V+++EM A+ +Q +FPG E+ + Q+ P A +LRAPIFE
Sbjct: 352 RLGLLLAEIGQKAEITVSDQEMTQAVLRQARQFPGQERAFFEFIQQNPQAQQQLRAPIFE 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
DKV+DHI++ ++ ++ VT D+L
Sbjct: 412 DKVVDHIVEGAKVSEKPVTKDELEK 436
>gi|254428761|ref|ZP_05042468.1| trigger factor [Alcanivorax sp. DG881]
gi|196194930|gb|EDX89889.1| trigger factor [Alcanivorax sp. DG881]
Length = 437
Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats.
Identities = 92/451 (20%), Positives = 218/451 (48%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + GL+R + V +P+ ++ + ++++ + + GFRPGKVP+ +K +G
Sbjct: 1 MQVSVETTSGLERRVTVGVPAEKVDVAVEGKLQEAQKTIRLDGFRPGKVPMREVKRRFGG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ +E + ++++E E + + + A P E DL+ ++++
Sbjct: 61 AVRNEVLADVMREAFIEAVEQEKLQPAGMPGFEAKTN---------EAGKDLEFVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+++FD ++V + +V + ++D + + + F + +E GD+V +D+
Sbjct: 112 YPEVELAAFDTIEVEKPQSDVTDADVDTMIETLRQQRAEFADVDRAAETGDRVNIDFKGL 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + + +GS + + +VG+K GD+K+I+ FPED+ +DL G+ V
Sbjct: 172 KDGEAFEGGTAEGQNLELGSGQMIPGFEDGIVGMKAGDEKDIDVTFPEDYQSEDLKGQSV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +V V+ + G + E+ + + +++ + + KVK Q +
Sbjct: 232 VFQIKVNKVEGKALPEVDAEFMKGFGVDDGDETKFKAEVRKNMERELKNAITSKVKEQAM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + N + FD+P +LV E + Q++ + Q ++ + A+R V
Sbjct: 292 DGLVNLHEFDLPAALVTQEIQRMRQQMMQQFGGGQQFDPSIL-----PDDLFKEQAERSV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+V+ I +KN I+ +++++ + + ++ ++++ P L ++ + E
Sbjct: 347 RLGLVVRAILDKNEIKADADKVKARVEEIAEQY-EKPEEVVSWVYSNPQQLQQIEGAVLE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
++V+D +L+S ++ ++ + + ++
Sbjct: 406 EQVVDLVLESAKVEEKTMPYQDAVKPREQAE 436
>gi|293610271|ref|ZP_06692572.1| trigger factor [Acinetobacter sp. SH024]
gi|292827503|gb|EFF85867.1| trigger factor [Acinetobacter sp. SH024]
Length = 444
Score = 242 bits (617), Expect = 8e-62, Method: Composition-based stats.
Identities = 99/449 (22%), Positives = 214/449 (47%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ I GFRPGKVP + ++ YG
Sbjct: 1 MQVTTEAVSGVARRLNVSVPTSRINEQFEARLKRTAKTVKINGFRPGKVPENVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI E +++II++ V E + + A P+I E + D L + ++
Sbjct: 61 SIYQEVVNDIIRDSVFEAIQQEKINAVGMPNIEKVEHKEDA----------LVFEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +FD L+V + E+ + ++D + + K + V + ++ +VT D+ +
Sbjct: 111 YPEVEVKAFDGLEVERKSAEIKDADVDAMIENLQKQRQTWAVTKGMAKKDMQVTFDFEGT 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S ++ + ++GS + + ++G+K G++K I+ FPED+ ++LAGK
Sbjct: 171 IDGEKFEGGSAEDFKLVLGSGRMIPGFEDGIIGMKAGEEKVIDVTFPEDYQAENLAGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K+V ++ + G E ++ + +++ +R +VK+
Sbjct: 231 QFKITVKQVEKSKLPEIDAEFLKIFGVTEEEGVEKLKADVRKNMEREVRNGLRNQVKQAA 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + +VP ++V E + Q++ + + + + A+R
Sbjct: 291 FDALVAANEVEVPTAMVAQEIDRQRQQMVQQFTQQFGGAGAQSFDKSMLPDELFKEQAER 350
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + +EV + + + + + +++++F+ A++ A +
Sbjct: 351 SVKLGVLVSKVLADAKLEVDQARVDAYIDDMASSY-EDPTEVIEYFKNDAQQRAQIEAVV 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+DHIL ++ D+ V++D L
Sbjct: 410 LEDQVVDHILAGAKVTDKAVSYDDLLKEQ 438
>gi|114762815|ref|ZP_01442247.1| trigger factor [Pelagibaca bermudensis HTCC2601]
gi|114544425|gb|EAU47432.1| trigger factor [Roseovarius sp. HTCC2601]
Length = 443
Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats.
Identities = 128/453 (28%), Positives = 239/453 (52%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR ++I+ + L N ++ + + + +KGFR GKVP+ +K +G+
Sbjct: 1 MQVTETLNEGLKRAYELILTAEELDAKVNAKLAEAQPEIEMKGFRKGKVPMPLLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E++ E I E + + +R A++P + + + + D+ + +SY+
Sbjct: 61 RLMGESMQEAIDEAMSKHFEDSGDRPALQPEVKMT-------NEDWKEGEDVNVAMSYEK 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP++ +++ + + + D+ +D +A +A+ F + E++ GD+V +D+
Sbjct: 114 LPEVPEVDLSGVEIEKLVVKADDAAVDEALASLAETAQDFNDRAEGAEAQDGDQVVIDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + ++ ++GS E L G+K GD+K +E FPE++ ++LAGK
Sbjct: 174 GKVDGEAFEGGAAEDYPLVLGSGSFIPGFEEQLTGVKAGDEKAVEVNFPEEYGAENLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V P+ ++++LA + G E ++G ++++ RQ +KR +L
Sbjct: 234 AAVFDVTVKAVKEPVAAEIDDELAKKFGAEDLEGLKGQIRERLEAEYAGAARQVMKRGLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + TFD+P SLVE E I ++ E + + E + ++ LA+RRV
Sbjct: 294 DKLDTLVTFDLPPSLVEAEAKQIAHQLYHEEHPEDHGHD---HGEIEPTEEHNSLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K +EVT+ EM A+ Q ++PG E+ D ++ +LRAPIFE
Sbjct: 351 RLGLLLAEMGQKAEVEVTDAEMTQAIMNQARQYPGQERAFFDFVRQNAQMQQQLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKVIDHI + ++ +++VT ++L E
Sbjct: 411 DKVIDHIAEQAKVSEKEVTKEELQTAVEALDEE 443
>gi|262373456|ref|ZP_06066734.1| trigger factor [Acinetobacter junii SH205]
gi|262311209|gb|EEY92295.1| trigger factor [Acinetobacter junii SH205]
Length = 443
Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats.
Identities = 98/449 (21%), Positives = 216/449 (48%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ I GFRPGKVPL+ ++ YG
Sbjct: 1 MQVTTEAVSGVARRLNVSVPTSRVNEQFEARLKRTAKTVKINGFRPGKVPLNVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI E ++++I++ V E + + A P+I E + D L + ++
Sbjct: 61 SIYQEVVNDLIRDTVFEAIQQEKINAVGMPNIEKVENKDDA----------LVYEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ SF DL++ + E+++ ++D + + K ++ + ++ +VT D+ +
Sbjct: 111 YPEVEVKSFADLEIDRKSSEINDADVDVMIENLQKQRASWTETKGMAKKDMQVTFDFEGT 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + ++ + ++GS + + +VG+K G++K I+ FPED+ ++LAGK
Sbjct: 171 VDGEKFEGGAAEDFKLVLGSGRMIPGFEDGIVGMKKGEEKVIDVTFPEDYQAENLAGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K V ++ + G E ++ + +++ +R +VK+
Sbjct: 231 QFKITVKLVEKQKLPEIDAEFLKIFGLTEEEGLDKLKADVRKNMEREVRNGLRNQVKQAA 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + +VP S+V E + Q++ + + + + + A++
Sbjct: 291 FDALVAANEIEVPASMVAQEIDRQRQQMIQQFTQQFGAQGAGAFDSSMLPDELFKEQAEK 350
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + +EV + + + + + +++++F+ A++ A +
Sbjct: 351 SVKLGVLVSKVLADAKLEVDQARVDAYINDMASSY-EDPTEVVEYFKNDKQQRAQIEAVV 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+DHIL + ++ D V+++ L
Sbjct: 410 LEDQVVDHILAAAKVNDVAVSYEDLLKEQ 438
>gi|225025230|ref|ZP_03714422.1| hypothetical protein EIKCOROL_02127 [Eikenella corrodens ATCC
23834]
gi|224941988|gb|EEG23197.1| hypothetical protein EIKCOROL_02127 [Eikenella corrodens ATCC
23834]
Length = 434
Score = 242 bits (617), Expect = 1e-61, Method: Composition-based stats.
Identities = 103/447 (23%), Positives = 219/447 (48%), Gaps = 15/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EGL+R L + +P + + +R++ + +A + GFRPGK PL I+S+YG
Sbjct: 1 MSVTIEKLEGLERSLQLELPWADIEAAVQKRLQATQKRARVDGFRPGKAPLRMIESMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +++ ++ EI+ D R A + E + D K+ +++
Sbjct: 61 GIRDEVLNDSLRHKFGEIVDSEDIRLAGLLAFDAVEAQDD--------EKVFKVNARFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I + S D ++ + +CEV E E+++ + + + F E E++ GD+V +D+ +
Sbjct: 113 FPEITVGSLADQEIEKVVCEVGEAEVEKTIDILRRQRTRFNRVEREAKDGDRVIIDFAGT 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E S +N FI+G + E + G+K G+ K++ FP D+ K++AGK
Sbjct: 173 IDGIPFEGGSAQNYPFILGQGQMLPEFESGIQGMKEGETKDVSVSFPADYHGKEVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ V + V+ A LG + MR + I++ + + K ++
Sbjct: 233 VFAITLRNVAEAVLPEVDEQFAKALGIQDGDVAKMREEVKKNIEREVNRRIEAQTKDNVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++P++LV E ++ R + + K ++VD D + A+RRV
Sbjct: 293 KALLDVTPIELPKTLVREETARMVANARQNLVNQGMKPEDVDLADSLFTE----QAERRV 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + K+N++ T++++++ + + ++++D + + L + E
Sbjct: 349 ALGLILAELVGKHNLQPTDDQVKAVVQTFSESY-EDPQEVMDWYFADRSRLEGPISMAVE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
V+D++L ++ ++K++FD++
Sbjct: 408 ANVVDYVLGQAKVNEKKLSFDEVMGQQ 434
>gi|109899442|ref|YP_662697.1| trigger factor [Pseudoalteromonas atlantica T6c]
gi|122971702|sp|Q15R45|TIG_PSEA6 RecName: Full=Trigger factor; Short=TF
gi|109701723|gb|ABG41643.1| trigger factor [Pseudoalteromonas atlantica T6c]
Length = 436
Score = 242 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 215/448 (47%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + +P+ + R++ + I GFRPGKVP+S IK YG+
Sbjct: 1 MQVSVETTQGLERRLTITVPAESIDSQVKSRLQQLAKTQRINGFRPGKVPVSVIKKRYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E E ++ E + + A P+ + DL+ ++++
Sbjct: 61 AVRQEIAGEAMQRNFYEAIVQEKITPAGMPNFEMKTDV---------DGQDLEFVAAFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + ++V + + E+ + +++ M + K + ++ + +S+ D+VTVD+ +
Sbjct: 112 YPEVEVKDVEKIEVEKPVVEITDADLETMMETLRKQHATWKEVKRKSKKDDRVTVDFVGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N + +G + + +VG K G++ + FPED+ + L GK+
Sbjct: 172 IDGEEFEGGKAENFELEMGKDRMIPGFEKPIVGAKAGEEVVADVTFPEDYHAEALKGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V+ + A G E A+ + +++ E ++ VK Q++
Sbjct: 232 QFKITVNKVEGLSLPKVDEEFAKLFGVEDGDVEALNAEVRKNMQRELEQTLKANVKEQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + D+P++LV+ E N + ++ + S NVD++ E + A++RV
Sbjct: 292 EGLLANNEIDLPKALVDQEINALREQAKQRFSQQQ--GGNVDNLPELPADLFQENARKRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG I + ++V ++ + L + ++++++++ + +++ E
Sbjct: 350 SIGLLLGEIIKTEELKVDSAKVDA-LIETAASAYEDPQEVIEYYKTNDELMQQMQNVALE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
++ ++ +L + + FD++ + +
Sbjct: 409 EQAVEVLLSKANVKEVNKAFDEIMNKQA 436
>gi|326577943|gb|EGE27807.1| trigger factor [Moraxella catarrhalis O35E]
Length = 444
Score = 241 bits (615), Expect = 1e-61, Method: Composition-based stats.
Identities = 100/450 (22%), Positives = 208/450 (46%), Gaps = 13/450 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
Q+ + +L V +P + RI + A I GFR GKVP+SHI+S YG
Sbjct: 5 QISVNVVSDKETQLTVKVPVGNIQSKVESRIRSVAKTAKIDGFRKGKVPVSHIRSQYGAG 64
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I E I+++I++ V E + R P+I + E D L + + +
Sbjct: 65 IQQEVINDVIRDTVFEAIGNAKIRVVGVPNIDDVKLEDDF----------LVYQATVETF 114
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++E+ +++V + + ++++D + + K FE KE E E GD+ T D+ +
Sbjct: 115 PEVEVQGLGEIEVERHTATISDEDVDTMVENLQKQRQTFETKEGELEEGDQATFDFEGLI 174
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D E S +N ++GS + + + G+K G++K I FPED+ + LAGK+ +
Sbjct: 175 DGEKFEGGSAENHTLVIGSGRMIPGFEDGMKGMKAGEEKTITVTFPEDYQAEHLAGKEAQ 234
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++KEV + +N++ G ++ + +++ + R +VK+ D
Sbjct: 235 FIITLKEVKASALPELNDEFFELFGVTEGGLDQLKADVRKNMEREVKHAARNQVKQAAFD 294
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ K FDVP+++++ E + Q + S + + + A R V
Sbjct: 295 ALLEKNEFDVPKAMLDQEIDRQRQLMLNRFSQQFGADPKTFDSNMLPNELFEDQALRAVR 354
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G+++ I E + V ++ + + + + + ++++++ A++ + + ED
Sbjct: 355 LGVLVSQIIESQKLTVDQDRVTAFIAEAAENY-EDPAEVIEYYTNDKAQRAQVESVVLED 413
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
+V+D++L ++ D+ V + +L + + +
Sbjct: 414 QVVDYLLGHAKVSDKTVNYQELLAAAQQQA 443
>gi|134295959|ref|YP_001119694.1| trigger factor [Burkholderia vietnamiensis G4]
gi|166229026|sp|A4JF06|TIG_BURVG RecName: Full=Trigger factor; Short=TF
gi|134139116|gb|ABO54859.1| trigger factor [Burkholderia vietnamiensis G4]
Length = 448
Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats.
Identities = 97/461 (21%), Positives = 215/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDTVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + I + R A +PS + +++ ++++
Sbjct: 61 QVEAEVLSDKIGQEFFTISRAENLRVAGQPSFEPKQEQAE---------DAYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P+++I +V + + + EIDR + + K V + + E
Sbjct: 112 YPEVKIGDLATAEVERSTTSIGDAEIDRTLDILRKQRVHYHARGEAGEHGDGGADTAAKN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + + ++ F++G + E +GLK G+ + + FP+D
Sbjct: 172 GDRVTVDFVGKIDDVAFQGGTAEDFPFVLGEGRMLPEFETAALGLKVGEARTFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K++ P ++ + A LG E MR + +++ ++
Sbjct: 232 YHGKDVAGKTAQFTVTMKKIEWPHMPEIDAEFAKSLGIEDGDLTKMRAEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP++L+E + +++ R +++ +
Sbjct: 292 RTQSIVKNQVMDALLKISELDVPKALIEQDQQRLVEMARQDLAQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFAEQAERRVKLGLVLAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V++ +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVEFVLGKAKVTDKEVSFEALASASAQA 448
>gi|296157826|ref|ZP_06840660.1| trigger factor [Burkholderia sp. Ch1-1]
gi|295892072|gb|EFG71856.1| trigger factor [Burkholderia sp. Ch1-1]
Length = 448
Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats.
Identities = 96/461 (20%), Positives = 208/461 (45%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDAVQKEVDSRIRQLAKNVRMPGFRPGKVPLKMVTQQYSG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + + + +I + R A +PS + D ++++
Sbjct: 61 QVEAEVLSDKVGKEFFDISRAENLRVAGQPSFAPKTDAVE---------GDYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++++ ++ + + E EIDR + + K V F + E
Sbjct: 112 YPEVKLGDVATAEIERTTTTISEAEIDRTLDILRKQRVHFHARGEAGEHGDGGGDTAAKE 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ ++ + + S + F++G + E + GLK G+ KE + FPED
Sbjct: 172 GDRVTVDFVGKIEGDVFQGGSADDFAFVLGEGRMLPEFEKAATGLKVGESKEFDLAFPED 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ K++AGK + ++K++ P ++ + A LG E MR +++ ++
Sbjct: 232 YHGKEVAGKTAQFTITMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKDNLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP +L+E + ++ R ++ +
Sbjct: 292 RTQAIVKNQVMDALLKISELDVPNALIEQDQERLVAMARQDLEQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A+RRV G+VL + + N ++ E++++ + + + K+++ +
Sbjct: 349 AMFKEQAERRVKLGLVLAELVKANELQAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V++ +L ++ D++V+F++L ++++
Sbjct: 408 RLAEMEAYVVEANVVEFVLSKAKVTDKEVSFEELASATAQA 448
>gi|126725412|ref|ZP_01741254.1| trigger factor [Rhodobacterales bacterium HTCC2150]
gi|126704616|gb|EBA03707.1| trigger factor [Rhodobacterales bacterium HTCC2150]
Length = 445
Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 118/443 (26%), Positives = 235/443 (53%), Gaps = 12/443 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR ++IP++ L +E++ + + + +KGFR GKVP++ +K +G
Sbjct: 1 MQVTETLNEGLKRAYTIVIPASDLEAKVSEKLIEAQPEVEMKGFRKGKVPMALLKKQFGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E++ E + + + + ER A +P + + +G + D+ L +SY+
Sbjct: 61 RLMGESMQETVDGAMAKHFEESGERPAFQPKMEMKDG------ENWKPGDDVSLDMSYEA 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---EIGDKVTVDY 177
LP I + F +++ + + + D++ ++ + +A +E ++ D+V +D+
Sbjct: 115 LPTIPDADFSSVKLEKLVVKADDEGVEEALKNLAGTATNYETNTKKTAKAANDDQVVIDF 174
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD+V + + ++ ++GS E LVG K G + FP ++ ++LAG
Sbjct: 175 LGKVDDVPFDGGAGEDYPLVLGSNSFIPGFEEQLVGAKAGTDVVVNVTFPAEYGAENLAG 234
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K +KE+ +P+ +N++LA + G E + ++G +++++ R +KR++
Sbjct: 235 KDAVFECKVKEIKNPVAAEINDELAKQFGAEDLAGLKGQITERLEAEYAGAARAVMKRKL 294
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + Y+F++P +LVE+E I ++ E N + + D + E + LA RR
Sbjct: 295 LDQLDGLYSFELPPTLVESEAKQIAHQLWHE---ENPEVEGHDHPEVEATDEHTELANRR 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G++L +G+KN I V++ EM A+ Q ++PG E++ + Q+ +L+AP+F
Sbjct: 352 VRLGLLLAELGQKNEITVSDSEMTQAIMNQARQYPGQERQFFEFAQQNAEFRQQLQAPLF 411
Query: 418 EDKVIDHILKSVQIVDRKVTFDQ 440
EDKV+D++ + I +++ T
Sbjct: 412 EDKVVDYVFELSTITNKEATKAD 434
>gi|296112316|ref|YP_003626254.1| trigger factor TF [Moraxella catarrhalis RH4]
gi|295920010|gb|ADG60361.1| trigger factor TF [Moraxella catarrhalis RH4]
gi|326561826|gb|EGE12161.1| trigger factor [Moraxella catarrhalis 7169]
gi|326563258|gb|EGE13525.1| trigger factor [Moraxella catarrhalis 46P47B1]
gi|326563372|gb|EGE13637.1| trigger factor [Moraxella catarrhalis 12P80B1]
gi|326565910|gb|EGE16071.1| trigger factor [Moraxella catarrhalis 103P14B1]
gi|326568953|gb|EGE19022.1| trigger factor [Moraxella catarrhalis BC1]
gi|326569252|gb|EGE19313.1| trigger factor [Moraxella catarrhalis BC7]
gi|326571927|gb|EGE21932.1| trigger factor [Moraxella catarrhalis BC8]
gi|326575440|gb|EGE25365.1| trigger factor [Moraxella catarrhalis 101P30B1]
gi|326576472|gb|EGE26380.1| trigger factor [Moraxella catarrhalis CO72]
Length = 444
Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 100/450 (22%), Positives = 208/450 (46%), Gaps = 13/450 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
Q+ + +L V +P + RI + A I GFR GKVP+SHI+S YG
Sbjct: 5 QISVNVVSDKETQLTVKVPVGNIQSKVESRIRSVAKTAKIDGFRKGKVPVSHIRSQYGAG 64
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I E I+++I++ V E + R P+I + E D L + + +
Sbjct: 65 IQQEVINDVIRDTVFEAIGNEKIRVVGVPNIDDVKLEDDF----------LVYQATVETF 114
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++E+ +++V + + ++++D + + K FE KE E E GD+ T D+ +
Sbjct: 115 PEVEVQGLGEIEVERHTATISDEDVDTMVENLQKQRQTFETKEGELEEGDQATFDFEGLI 174
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D E S +N ++GS + + + G+K G++K I FPED+ + LAGK+ +
Sbjct: 175 DGEKFEGGSAENHTLVIGSGRMIPGFEDGMKGMKAGEEKTITVTFPEDYQAEHLAGKEAQ 234
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++KEV + +N++ G ++ + +++ + R +VK+ D
Sbjct: 235 FIITLKEVKASALPELNDEFFELFGVTEGGLDQLKADVRKNMEREVKHAARNQVKQAAFD 294
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ K FDVP+++++ E + Q + S + + + A R V
Sbjct: 295 ALLEKNEFDVPKAMLDQEIDRQRQLMLNRFSQQFGADPKTFDSNMLPNELFEDQALRAVR 354
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G+++ I E + V ++ + + + + + ++++++ A++ + + ED
Sbjct: 355 LGVLVSQIIESQKLTVDQDRVTAFIAEAAENY-EDPAEVIEYYTNDKAQRAQVESVVLED 413
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
+V+D++L ++ D+ V + +L + + +
Sbjct: 414 QVVDYLLGHAKVSDKTVNYQELLAAAQQQA 443
>gi|226953942|ref|ZP_03824406.1| trigger factor, molecular chaperone involved in septum formation
[Acinetobacter sp. ATCC 27244]
gi|294651553|ref|ZP_06728862.1| peptidylprolyl isomerase [Acinetobacter haemolyticus ATCC 19194]
gi|226835296|gb|EEH67679.1| trigger factor, molecular chaperone involved in septum formation
[Acinetobacter sp. ATCC 27244]
gi|292822576|gb|EFF81470.1| peptidylprolyl isomerase [Acinetobacter haemolyticus ATCC 19194]
Length = 443
Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 97/449 (21%), Positives = 217/449 (48%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ I GFRPGKVPL+ ++ YG
Sbjct: 1 MQVTTEAVSGVARRLNVSVPTSRVNEQFEARLKRTAKTVKINGFRPGKVPLNVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI E ++++I++ V E + + A P+I E + D L + ++
Sbjct: 61 SIYQEVVNDVIRDTVFEAIQQEKINAVGMPNIEKVENKDDA----------LVYEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +F DL+V + E+++K++D + + K ++ + ++ +VT D+ +
Sbjct: 111 YPEVEVKAFADLEVERKSSEINDKDVDVMIENLQKQRASWTETKGMAKKDMQVTFDFEGT 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + ++ + ++GS + + ++G+K G++K I+ FPED+ ++LAGK
Sbjct: 171 VDGEKFEGGAAEDFKLVLGSGRMIPGFEDGIIGMKKGEEKVIDVTFPEDYQAENLAGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K V ++ + G E ++ + +++ +R +VK+
Sbjct: 231 QFKITVKLVEKQKLPEIDAEFLKIFGLTEEEGLDKLKADVRKNMEREVRNGLRNQVKQAA 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + +VP S+V E + Q++ + + + + + A++
Sbjct: 291 FDALVAANEIEVPASMVAQEIDRQRQQMIQQFTQQFGAQGAGAFDSSMLPDELFKEQAEK 350
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + +EV + + + + + +++++F+ A++ A +
Sbjct: 351 SVKLGVLVSKVLADAKLEVDQARVDAYIDDMASSY-EDPTEVVEYFKNDKQQRAQIEAVV 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+DHIL + ++ D ++++ L
Sbjct: 410 LEDQVVDHILAAAKVTDVAISYEDLLKEQ 438
>gi|85707084|ref|ZP_01038172.1| trigger factor [Roseovarius sp. 217]
gi|85668370|gb|EAQ23243.1| trigger factor [Roseovarius sp. 217]
Length = 443
Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 125/453 (27%), Positives = 238/453 (52%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L + N ++++ + +KGFR GKVPL +K +G+
Sbjct: 1 MQVTETLNEGLKRGYKMTLSAKDLDEKVNAKLKEAQPDIELKGFRKGKVPLPLLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + E + + + + ER A P + + + + D+++ LSY+
Sbjct: 61 RVLGEAMQESVDDAMKAHFEAKGERPAFEPDVKM-------ANQEWKEGDDVEIELSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I L++ + + + D+ +D + +A+ F+ ++ +++ GD+V +D+
Sbjct: 114 LPAIPEVDLKSLKLERLVAKADDAAVDEALKNLAETAQDFKDRKKGTKAKDGDQVVIDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + S ++ ++GS E LVG+K ++K + FPE + LAGK
Sbjct: 174 GKVDGEPFDGGSAEDYPLVLGSGSFIPGFEEQLVGVKVEEEKAVTVTFPEAYQAAHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +IK V P+ +N++LA + G E +A++ ++++ R +KR +L
Sbjct: 234 EAVFDCTIKAVREPVAAEINDELAQKYGAEDLAALKTQIGERLEMEYSGAARAILKRHVL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + K +F++P S+VE E I ++ E N D + + ++ LA+RRV
Sbjct: 294 DQLDEKVSFELPPSMVETEAKQIAHQLWHE---ENPDVHGHDHPEIDVTDEHNKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K ++V++ EM A+ Q ++PGHE++ + QK P +LRAPIFE
Sbjct: 351 RLGLLLADLGQKAEVQVSDAEMTQAVMNQARQYPGHEREFFEFVQKNPQMRQQLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKVID++++ + D++++ ++L + E
Sbjct: 411 DKVIDYVVELADVTDKELSKEELEKAIEAMNDE 443
>gi|30248061|ref|NP_840131.1| trigger factor [Nitrosomonas europaea ATCC 19718]
gi|41018197|sp|Q82Y58|TIG_NITEU RecName: Full=Trigger factor; Short=TF
gi|30179946|emb|CAD83941.1| FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
[Nitrosomonas europaea ATCC 19718]
Length = 439
Score = 241 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 98/445 (22%), Positives = 208/445 (46%), Gaps = 15/445 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + S L+R +++ + ++ R++ + K ++GFRPGKVPL + YG
Sbjct: 1 MQTQGEASNPLERNIELSVSREKVEAEVGVRLKRLAPKVKVQGFRPGKVPLKIVAQQYGH 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E++++ + +++ + R A P + G + R +++I
Sbjct: 61 QVEHEVLGELLQQQFNDAVNQENYRVAGIPGFE-------SRNSDANGATSYEFRATFEI 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P IE+ + V + + ++ + EI + + + K +E + ++ GD+VT+DY
Sbjct: 114 YPDIELGDLSSITVNKPVLQIGDAEIQKTLDILRKQRATYEPTDRPAQTGDRVTIDYRGV 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + I+G+ L + ++G+ G +K + FP D+ KD+AGKKV
Sbjct: 174 LDGEGFPGGQADDYSVILGNGHLLEDFESSILGMTAGQEKTFDMTFPADYPGKDVAGKKV 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +P V+ + A LG MR +++ +R K+K Q++
Sbjct: 234 SFTIRLNKLEAPKLPEVDGEFAKSLGVAEGDIDKMRSEIKANLQREISQRIRTKLKEQVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ +K VP+ L+ E + + ++++ ++ + S D + A+RRV
Sbjct: 294 QSLLDKVLIQVPKVLIRQEADRLAEEMQNSRAARGFRKDQSLSGDVFLEK-----AERRV 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + + + + V E+++S + + + + ++++ P L E+ I E
Sbjct: 349 RLGLILSKLIDTHELSVKPEQVRSFIEEYAQGY-ENPEQVIKWHYASPERLKEIEPLILE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
D + +L +I+D+ VTFD+L
Sbjct: 408 DNAVSWLLDKAKIIDQSVTFDELMG 432
>gi|91783519|ref|YP_558725.1| trigger factor [Burkholderia xenovorans LB400]
gi|118574064|sp|Q13Z16|TIG_BURXL RecName: Full=Trigger factor; Short=TF
gi|91687473|gb|ABE30673.1| Trigger factor [Burkholderia xenovorans LB400]
Length = 448
Score = 241 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 96/461 (20%), Positives = 209/461 (45%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDAVQKEVDSRIRQLAKNVRMPGFRPGKVPLKMVTQQYSG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + + + +I + R A +PS ++ D ++++
Sbjct: 61 QVEAEVLSDKVGKEFFDISRAENLRVAGQPSFAPKTDATE---------GDYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++++ ++ + + E EIDR + + K V F + E
Sbjct: 112 YPEVKLGDVATAEIERTTTTISEAEIDRTLDILRKQRVHFHARGEAGEHGDGGGDTAAKE 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ ++ + + S + F++G + E + GLK G+ KE + FPED
Sbjct: 172 GDRVTVDFVGKIEGEVFQGGSADDFAFVLGEGRMLPEFEKAATGLKVGESKEFDLAFPED 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ K++AGK + ++K++ P ++ + A LG E MR +++ ++
Sbjct: 232 YHGKEVAGKTAQFTITMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKDNLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP +L+E + ++ R ++ +
Sbjct: 292 RTQAIVKNQVMDALLKISELDVPNALIEQDQERLVAMARQDLEQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A+RRV G+VL + + N ++ E++++ + + + K+++ +
Sbjct: 349 AMFKEQAERRVKLGLVLAELVKANELQAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V++ +L ++ D++V+F++L ++++
Sbjct: 408 RLAEMEAYVVEANVVEFVLSKAKVTDKEVSFEELASATAQA 448
>gi|86139983|ref|ZP_01058548.1| trigger factor [Roseobacter sp. MED193]
gi|85823401|gb|EAQ43611.1| trigger factor [Roseobacter sp. MED193]
Length = 447
Score = 241 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 129/453 (28%), Positives = 238/453 (52%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 5 MQVTETLNEGLKRGYAITVTAAELDAKVNEKLTEAQPEIEMKGFRKGKVPMALLKKQFGQ 64
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E I + E K +R AM+P + + + + D+ + +SY+
Sbjct: 65 RMIGEAMQEAIDGAMNEHFEKSGDRPAMQPDVKMT-------NEDWKEGDDVAVDMSYEA 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYT 178
LP+I + + + + + +++ + + +A+N FE +E + D+V +D+
Sbjct: 118 LPEIPEVDLSGVTLEKLVVKAEDEAVTEALENLAQNAQEFEAREEAAASEDGDQVVIDFL 177
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + + ++GS E LVG+KTGD+K++ FPE++ + LAGK
Sbjct: 178 GKVDGEAFEGGAADDYPLVLGSNSFIPGFEEQLVGVKTGDEKDVSVTFPEEYQAEHLAGK 237
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +IKEV +P +N+++A + G E ++G ++++ R +KR L
Sbjct: 238 EAVFSCTIKEVKAPKAAEINDEMAKKFGAEDLEGLKGQIRERLESEYSGAARAVMKRATL 297
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +FD+P SLVE E I ++ E + + + D + E + + LA+RRV
Sbjct: 298 DKLDELVSFDLPPSLVEAEAKQIAHQLWHE---DHPEVEGHDHGEIETTEEHTSLAERRV 354
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K +EVT+ EM A+ Q ++PG E++ + Q+ +LRAP+FE
Sbjct: 355 RLGLLLAELGQKAEVEVTDAEMTQAIMAQARQYPGQERQFFEFIQQNAQMQQQLRAPLFE 414
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKVIDH+ +S + +++V+ + L E
Sbjct: 415 DKVIDHLFESATVEEKEVSKEDLQKAVEALEEE 447
>gi|296284620|ref|ZP_06862618.1| trigger factor [Citromicrobium bathyomarinum JL354]
Length = 530
Score = 241 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 128/440 (29%), Positives = 240/440 (54%), Gaps = 12/440 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ E +EGLKR + IP++ + D ++ I + + GFRPGKVP + ++ ++G+
Sbjct: 1 MQITETANEGLKRAYLITIPASEIDDRIKAEVKRIAPQVRMPGFRPGKVPANLVRKMHGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ ++ +++ I+ V E++ + R AM+P++ + +G + D ++ +S +I
Sbjct: 61 QLHAQVVNDTIQSSVDELMKDKGLRPAMQPTVALKDG--------YDQGKDAEIDVSLEI 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYT 178
LP+I+ D +++ + + VD+ ID + IA N ++ + D+V +D+
Sbjct: 113 LPEIDTPDVDGIKLERLVVPVDQSAIDETLQRIADQNKTYKDAAKTKKAADGDQVIIDFV 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V E ++ ++GS + L G+KTGD+K ++ FPE++ LAGK
Sbjct: 173 GSIDGVEFEGGKAEDAPLVIGSGTFIPGFEDQLKGVKTGDEKTVKVTFPEEYQADHLAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K V +P +++D A LG ES +R L +++Q + L R ++KRQ+L
Sbjct: 233 DAEFAVTVKAVKTPEDSEIDDDFAKNLGLESADKLRELVKAQMEQETAGLTRTQMKRQLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + F VPE +V+ E+ I Q++ E S S+ E + Y +A+RRV
Sbjct: 293 DALAAGHDFAVPEGMVDAEFEQIWQQLMQEASREE-DSEAAVKEIESERDDYRRIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELRAPIF 417
G++L IG+ N ++++ +EM + Q ++ P ++ + Q P A A+LRAP++
Sbjct: 352 RLGLLLSEIGQANGVQISSQEMSMLMQQAAQQYRPEDRERFMQFIQNEPMAAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVT 437
EDKV+D + + +I +R+VT
Sbjct: 412 EDKVVDFLFEKAEIEEREVT 431
>gi|300114127|ref|YP_003760702.1| trigger factor [Nitrosococcus watsonii C-113]
gi|299540064|gb|ADJ28381.1| trigger factor [Nitrosococcus watsonii C-113]
Length = 443
Score = 241 bits (613), Expect = 3e-61, Method: Composition-based stats.
Identities = 99/457 (21%), Positives = 213/457 (46%), Gaps = 16/457 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R L + +P + ER+ + + + GFRPGKVP ++ YG
Sbjct: 1 MQVTVEATGELERRLTITLPEGNFENRVQERLRSMVPRIKMDGFRPGKVPYKVVERRYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E DE +++ + + ++ R A P + + +E +++++
Sbjct: 61 AVRQEVSDEFVRDSFRDAIKEKSLRPASMPRVEPPQ---------LEAGKPFAYTVTFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE D +++ Q E+ +K+I + ++ + ++ +E E ++ D VT++Y S
Sbjct: 112 LPDIESVKLDGIKIKQPRAEITDKDIQEVLEKLREQHIEWEPVERPAQEADGVTINYHGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ SK++ I+G E E L+G TG + + FPED+ ++LAGK+
Sbjct: 172 IEEKSFPGGSKEDFFVILGKGTTLKEFEEHLIGAHTGQELTFDITFPEDYGNQELAGKQA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ V +P +N D A +LG + +R + ++ E R +V+ QI+
Sbjct: 232 SFTVKVISVTAPRLPEINEDFAEKLGIKEGGVETLRQEIKVSMTRNLEQATRDRVREQIM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +P SLV+ E + ++ + + Q + + ++ A++RV
Sbjct: 292 DSLLAANPITLPISLVKEEMKILHEQAKNNLIKQGINPQAISLGESPFVE----QARKRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++ TI EK I+ +++++ + + + ++ L+E+ + E
Sbjct: 348 ALRLIFSTILEKQEIKAGQDKVKQRVTELAASY-EDPEEFSRWIFGDQERLSEIERDVME 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
+++D +L V++ D ++F+++ + + EK+ D
Sbjct: 407 TQIVDWVLGQVEVSDEAMSFEEVVNPQISLAKEKIQD 443
>gi|149203942|ref|ZP_01880910.1| trigger factor [Roseovarius sp. TM1035]
gi|149142384|gb|EDM30429.1| trigger factor [Roseovarius sp. TM1035]
Length = 443
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 130/453 (28%), Positives = 242/453 (53%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR +I+ + L + N ++++ + IKGFR GKVPL +K +G+
Sbjct: 1 MQVTETLNEGLKRGYKMILSAKDLDEKVNAKLKEAQPDIEIKGFRKGKVPLPLLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + E + + + + ER A P + + + + D+++ LSY+
Sbjct: 61 RVLGEAMQESVDDAMKAHFEAKGERPAFEPDVKM-------ANQDWKEGDDVEIVLSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I L++ + + + D+ +D + +A+N F+ ++ +S+ GD+V +D+
Sbjct: 114 LPAIPDVDLKSLKLERLVAKADDAAVDEALKNLAENAQDFKDRKKGSKSKDGDQVVIDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + S ++ ++GS E LVG+K + K + FPE + LAGK
Sbjct: 174 GKVDGEAFDGGSAEDYPLVIGSGSFIPGFEEQLVGVKVEEVKAVTVTFPEAYQAAHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K V P+ +N++LA + G E +A++ S++++ R +KR +L
Sbjct: 234 EAVFDCTVKAVKEPVAAEINDELAQKYGAEDLAALKTQISERLEMEYAGAARAILKRHVL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + K +FD+P S+V+ E I ++ E N Q D + + + + LA+RRV
Sbjct: 294 DQLDEKVSFDLPPSMVDAEAKQIAHQLWHE---ENPDVQGHDHPEIDVTEEHIKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K ++V++ EM A+ Q ++PGHE++ + QK P +LRAPIFE
Sbjct: 351 RLGLLLAELGQKAEVQVSDAEMTQAVMNQARQYPGHEREFFEFVQKNPQMRQQLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKVID++++ ++ D++++ ++L + E
Sbjct: 411 DKVIDYVVELAEVTDKELSKEELEKAIEAMNDE 443
>gi|304321922|ref|YP_003855565.1| trigger factor [Parvularcula bermudensis HTCC2503]
gi|303300824|gb|ADM10423.1| trigger factor [Parvularcula bermudensis HTCC2503]
Length = 450
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 136/457 (29%), Positives = 248/457 (54%), Gaps = 9/457 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V EK +EGL RE V+IP L+ + ++E+++ + ++KGFRPGK PLS +K +YGK
Sbjct: 1 MNVTEKSAEGLSREFHVVIPQTHLSTRLDAKLEEVKGQVHLKGFRPGKAPLSFLKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++SE I E + + R AM P +G I +IEG DL+ + ++
Sbjct: 61 GMMSELIQEEMAAAQEKAFGDAKIRPAMPPHPHFEDG---IIEKVIEGDADLEYDIHVEV 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP E + D L + + EV + E+D ++ +IA+ N + ++ +E GD++ +D+
Sbjct: 118 LPDFEPIAIDGLSFQKKVTEVPDDEVDEELKKIAEQNTQYAARDEGAAAENGDQLEIDFV 177
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + + + V ++GS E L+G+ G++K I FPE++ LAGK
Sbjct: 178 GKIDGEPFDGGAGEYVPIVLGSQSFIPGFEEQLLGVTAGEEKTITVTFPEEYGAPHLAGK 237
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++ V +P V++ LA LG E ++ ++++ E R +KR IL
Sbjct: 238 EATFDITVHAVKAPKEATVDDQLAQSLGMEDLDQLKARVREQVEGRFETQSRLHLKRDIL 297
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + ++ FD+P +VE E+N I ++ + + ++ + +++ Y +A+RRV
Sbjct: 298 DLLDEQHEFDLPPGMVEAEFNQIWS----QVENVERDEEDKEKSEDDLKADYRKIAERRV 353
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+VL IG++ N+ V ++++Q + Q + +++++ Q+ P ALA++RAP+FE
Sbjct: 354 RLGLVLAEIGKEANVTVPDQDLQRQIQMQAMQAGVPVQQVIEFLQQNPAALAQIRAPLFE 413
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
DKVIDHI++ +I + V+ ++L + E P D
Sbjct: 414 DKVIDHIIEKAEISETTVSREELMKDPGEDEPAPAAD 450
>gi|298369364|ref|ZP_06980682.1| trigger factor [Neisseria sp. oral taxon 014 str. F0314]
gi|298283367|gb|EFI24854.1| trigger factor [Neisseria sp. oral taxon 014 str. F0314]
Length = 436
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 98/448 (21%), Positives = 206/448 (45%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ V + + ++R++ + + I GFRPGK PL + S+YG
Sbjct: 1 MSVTVETLENLERKVIVSLAWADINAETDKRLKQTQRRVKIDGFRPGKAPLKMVASMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +E I+E+++ +I + + A P E + D S LK+ +++
Sbjct: 61 SVQNEVINELVQRAFYDIAVSENLKVAGFPRFEGVEEQDDKDS--------LKIAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I ++ + EV + E+++ + + K F + ++ D+V +D+
Sbjct: 113 FPEVSIGDLSASEIEKVTSEVGDAEVEKTVEILRKQRTRFNHVDRAAQNSDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S KN F++GS + E + G+K G+ K++E FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGSSKNYAFVLGSGQMLPEFEAGIAGMKAGESKDVEVNFPEDYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ + A LG MR + + + E +++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDAEFAKALGIADGDVAKMREEVKKNVAREVERRTQEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + VP +LV +E + ++++ + + + A RRV
Sbjct: 293 DALLKAVELQVPNALVNDEATRLAEEMKQNFVNQGMANAG---QVNLPADMFKEQAHRRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + E+N +E TEE++++ + + ++++D + N L + E
Sbjct: 350 ALGLILAKLVEENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYADANRLQGPTSLAVE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V++ +L ++ ++ ++FD++ +
Sbjct: 409 SNVVNFVLGKAKVTEKTLSFDEVMGAQA 436
>gi|295676516|ref|YP_003605040.1| trigger factor [Burkholderia sp. CCGE1002]
gi|295436359|gb|ADG15529.1| trigger factor [Burkholderia sp. CCGE1002]
Length = 448
Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 96/461 (20%), Positives = 209/461 (45%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDAVQKEVDSRIRQLAKNVRMPGFRPGKVPLKMVTQQYSG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + + + +I + R A +PS ++ ++++
Sbjct: 61 QVEAEVLSDKVGKEFFDISRAENLRVAGQPSFAPKTDAAE---------GSYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++++ ++ + + E EIDR + + K V F + E
Sbjct: 112 YPEVKLGDVATAEIERTTTSISEAEIDRTLDILRKQRVHFHARGEAGEHGDGGADTAAKD 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D + S ++ F++G + E + +GLK G+ KE + FP+D
Sbjct: 172 GDRVTVDFVGKIDGEAFQGGSAEDFGFVLGEGRMLPEFEKAALGLKVGEAKEFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ K++AGK + +IK++ P V+ + A LG + MR +++ ++
Sbjct: 232 YHGKEVAGKTAQFTITIKKIEWPHLPEVDGEFAKSLGIQDGDLTKMRAEIKDNLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP +L+E + ++ R ++ +
Sbjct: 292 RTQAIVKNQVMDALLKISELDVPNALIEQDQERLVAMARQDLEQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A+RRV G+VL + + N ++ E++++ + + + K+++ +
Sbjct: 349 AMFKEQAERRVKLGLVLAELVKANELQAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V++ +L ++ D++V+F++L ++++
Sbjct: 408 RLAEMEAYVVEANVVEFVLSKAKVTDKEVSFEELASATAQA 448
>gi|85373049|ref|YP_457111.1| trigger factor [Erythrobacter litoralis HTCC2594]
gi|122545326|sp|Q2NDC7|TIG_ERYLH RecName: Full=Trigger factor; Short=TF
gi|84786132|gb|ABC62314.1| peptidyl-prolyl cis-trans isomerase trigger factor [Erythrobacter
litoralis HTCC2594]
Length = 533
Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 126/444 (28%), Positives = 247/444 (55%), Gaps = 12/444 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ E +EGLKR + + + + + ++ + + + GFRPGKVP + ++ ++G+
Sbjct: 1 MQTKETTNEGLKRAYKLTLTAKEIDAKIDAEVKKVAPQVRMPGFRPGKVPANLVRKMHGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ ++ I++ I++ V ++ +++ R AM+P I +NE E D + +S +I
Sbjct: 61 QMHAQVINDSIRDSVDALIKEKELRPAMQPKIDLNE--------DYEQGKDAVVSVSLEI 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP++E S DDL++ + V ++++ + IA N +++ K ++ GD++ +D+T
Sbjct: 113 LPKVEAPSIDDLKLERLTVPVSDEQVMETIERIAGQNKSYKDAAKTRKAADGDQLIIDFT 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E ++ ++GS E L G+KTGD+K I FP+D+ ++LAGK
Sbjct: 173 GSVDGVEFEGGKAEDAPLVLGSGTFIPGFEEQLKGVKTGDEKTITVTFPKDYQAENLAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + +K+V ++++ A LG E+ ++ L +++Q + L R +KR +L
Sbjct: 233 EAQFDVKVKQVKVETDTTIDDEFAANLGLENLDKLKELIRGQLEQETNGLTRTAMKRSLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + F VPE +V+ E+ I +++ E + + + I E + Y +A+RRV
Sbjct: 293 DQLAAGHDFPVPEGMVDAEFEQIWNQLQQEAAQEEDPDKALKEI-EAEKDDYRAIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK-MLDHFQKYPNALAELRAPIF 417
G++L IG+ N +E++++EM Q ++ +++ + Q+ P A A+LRAP++
Sbjct: 352 RLGLLLSEIGQANGVEISQQEMSMLTMQAAQQYREEDRERFMQFIQQDPMAAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVTFDQL 441
EDKV+D + ++ DR+VT ++L
Sbjct: 412 EDKVVDFLFDKAEVTDREVTREEL 435
>gi|209521459|ref|ZP_03270167.1| trigger factor [Burkholderia sp. H160]
gi|209498115|gb|EDZ98262.1| trigger factor [Burkholderia sp. H160]
Length = 448
Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 95/461 (20%), Positives = 211/461 (45%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDAVQKEVDSRIRQLAKNVRMPGFRPGKVPLKMVTQQYSG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + + + +I + R A +PS ++ ++++
Sbjct: 61 QVEAEVLSDKVGKEFFDISRTENLRVAGQPSFAPKADAAE---------GSYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P++++ ++ + + E EIDR + + K V F + +T ++
Sbjct: 112 YPEVKLGDVAAAEIERTTTTISEAEIDRTLDILRKQRVHFHARGESGEHGDGGADTAAKE 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ + + S ++ F++G + E + +GLK G+ KE + FP+D
Sbjct: 172 GDRVTVDFVGKLGGEAFQGGSAEDFGFVLGEGRMLPEFEKAALGLKAGEAKEFDLKFPDD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ K++AGK + ++K++ P V+ + A LG + MR +++ ++
Sbjct: 232 YHGKEVAGKTAQFTITMKKIEWPHLPEVDGEFAKSLGIQDGDLTKMRAEIKDNLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP +L+E + ++ R ++ +
Sbjct: 292 RTQAIVKNQVMDALLKISELDVPNALIEQDQERLVAMARQDLEQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A+RRV G+VL + + N ++ E++++ + + + K+++ +
Sbjct: 349 AMFKEQAERRVKLGLVLAELVKANELQAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F++L ++++
Sbjct: 408 RLAEMEAYVVEANVVDFVLSKAKVTDKEVSFEELASATAQA 448
>gi|149926127|ref|ZP_01914389.1| trigger factor [Limnobacter sp. MED105]
gi|149824945|gb|EDM84157.1| trigger factor [Limnobacter sp. MED105]
Length = 434
Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 97/446 (21%), Positives = 218/446 (48%), Gaps = 15/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L++ + + + ++ +R++ + A + GFRPGKVP+ + YG
Sbjct: 1 MTETTTTASSLEKTISLKLSVEKINAEVEKRLKKVARTARMPGFRPGKVPMKMVVQNYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ SE +++ I E + K+D R A +P I + +D + +++
Sbjct: 61 QVHSEVLNDEIGRTFSEEVQKQDLRVAGQPRIEAAKDAAD---------DSFEFNAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+++ F L++ + + EV + E+D+ + + K +F + S DKVT+D+
Sbjct: 112 FPEVKFGDFATLEIEKTVVEVSDSEVDKTIEILRKQRASFAEVDRGSADEDKVTLDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D+V + + ++ F++G + E GLK G++K + FP D+ KD+AGK
Sbjct: 172 IDDVPFDGGTAEDFSFVIGKGQMLPEFEAAAKGLKKGEEKTFDLAFPADYHGKDVAGKTA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +IK+V P +N + A +G +R + + + + K ++
Sbjct: 232 QFTITIKKVEGPQLPELNEEFAKAMGIADGSLDKLRDDVRVNLSREVSNRTKAQTKEAVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + FDVP++L+++E + + R ++ + ++ + E + A+RRV
Sbjct: 292 NALLKVTEFDVPKALIQSETTELASRARQDLKARGMQNVEEIQLPE---DIFAAQAERRV 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + ++N+++ E++++ + +Q + + +++ + + LA++ A I E
Sbjct: 349 RLGLIVSDLVKENSLQAKPEQVRAFIEEQAQSY-ENPAEVMQWYFQDRARLADVEAVILE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
D V++ L ++V++K++FD+L N
Sbjct: 408 DNVVEFALSKSKVVEKKLSFDELMGN 433
>gi|119945200|ref|YP_942880.1| trigger factor [Psychromonas ingrahamii 37]
gi|166229923|sp|A1SUW6|TIG_PSYIN RecName: Full=Trigger factor; Short=TF
gi|119863804|gb|ABM03281.1| trigger factor [Psychromonas ingrahamii 37]
Length = 435
Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats.
Identities = 90/446 (20%), Positives = 203/446 (45%), Gaps = 16/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R+L V I + +N R+ + + GFRPGKVP S + +G
Sbjct: 1 MQVSVESTQGLERKLTVTIAAEAFDKEYNSRVHHLAKTQRVDGFRPGKVPTSVVTKRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E E+++ E + A RP+ E D ++++
Sbjct: 61 GIFQEVAGELMQRNFSEAVMAEKLNLAARPNFE---------PQAREKGQDFTFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ +S + L + +D EV + ++D+ + + K + + E E+ D+VT+D+ S
Sbjct: 112 YPEVTLSPLEALSIEKDSAEVTDADLDKMIETLRKQHAEWNAVEREAANDDQVTLDFEGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + ++GS + +VG G + I+ FPED+ + L GK V
Sbjct: 172 IDGEVFEGGKAEGFDIVLGSGKMIPGFEAGIVGHAAGSEFTIDVNFPEDYHAEQLKGKAV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + + + + G E+ ++ Q + + ++ K ++L
Sbjct: 232 QFAIKLTKVEEQILPEITPEFVQKFGVENGELETLKHDIKQNMVRELSQALKNSAKDKVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++P++LVE+ + +R + K + +++ E + + A++RV
Sbjct: 292 NALVENNEIEIPKALVED----EIVVLRKQAMERYAKEMDPENLPELPAELFKEQAEKRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G +LG + N + V +E++ +AL + + +++ +++ + + E
Sbjct: 348 KVGFLLGEVINVNELTVDQEKV-AALIESAASAYDNPAEVIAYYKNNKEMMQNMENVALE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
++ +D I++ ++ + +FD++ +
Sbjct: 407 EQAVDFIIEKAKVTEVNKSFDEVMNK 432
>gi|170692394|ref|ZP_02883557.1| trigger factor [Burkholderia graminis C4D1M]
gi|170142824|gb|EDT10989.1| trigger factor [Burkholderia graminis C4D1M]
Length = 448
Score = 240 bits (611), Expect = 5e-61, Method: Composition-based stats.
Identities = 95/461 (20%), Positives = 210/461 (45%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDAVQKEVDSRIRQLAKNVRMPGFRPGKVPLKMVTQQYSG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + + + +I + R A +PS ++ D ++++
Sbjct: 61 QVEAEVLSDKVGKEFFDISRAENLRVAGQPSFAPKVDATE---------GDYAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++++ ++ + + E EIDR + + K V F + E
Sbjct: 112 YPEVKLGDVATAEIERTTTTITEAEIDRTLEILRKQRVHFHARGEAGEHGDGGADTAAKE 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+V+VD+ +D + + S ++ F++G + E + GLK G+ KE + FP D
Sbjct: 172 GDRVSVDFVGKIDGEVFQGGSAEDFAFVLGEGRMLPEFEKAATGLKVGESKEFDLAFPAD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ K++AGK + ++K++ P ++ + A LG E MR +++ ++
Sbjct: 232 YHGKEVAGKTAQFTITMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKDNLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP +L+E + ++ R ++ +
Sbjct: 292 RTQAIVKNQVMDALLKISELDVPNALIEQDQERLVAMARQDLEQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A+RRV G+VL + + N+++ E++++ + + + K+++ +
Sbjct: 349 AMFKEQAERRVKLGLVLAELVKANDLQAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V++ +L ++ D++V+F++L ++++
Sbjct: 408 RLAEMEAYVVEANVVEFVLSKAKVTDKEVSFEELASATAQA 448
>gi|50083771|ref|YP_045281.1| trigger factor [Acinetobacter sp. ADP1]
gi|67461755|sp|Q6FEP9|TIG_ACIAD RecName: Full=Trigger factor; Short=TF
gi|49529747|emb|CAG67459.1| trigger factor, molecular chaperone involved in septum formation
[Acinetobacter sp. ADP1]
Length = 444
Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats.
Identities = 102/449 (22%), Positives = 219/449 (48%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ A I GFRPGKVPLS ++S +G
Sbjct: 1 MQVTTEAVSGVARRLNVSVPTSRINEQFEARLKRTAKTAKINGFRPGKVPLSRVRSDFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +++II++ V E + + A P+I E + D L + ++
Sbjct: 61 GIYQEVVNDIIRDTVFEAIQQEKINAVGMPNIEKVEHKDDA----------LVYEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +FD L+V + E+++K++D + + K + V + ++ +VT D+
Sbjct: 111 YPEVEVKAFDTLEVERKAAEINDKDVDAMIENLQKQRQTWAVTKGMAKKDMQVTFDFEGE 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E S ++ + ++GS + + ++G+K G++K I+ FPED+ +LAGK
Sbjct: 171 VDGEKFEGGSAEDFKLVLGSGRMIPGFEDGIIGMKAGEEKVIDVTFPEDYQAANLAGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K+V P ++ + G + ++ + +++ +R +VK+
Sbjct: 231 KFKITVKQVEKPKLPEIDAEFLKIFGISEEDGVEKLKADVRKNMEREVRNGLRNQVKQAA 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + DVP ++V E + +++ + + + + A++
Sbjct: 291 FDALVAANEIDVPSAMVAQEIDRQREQMIQQFTQQFGGAGAQSFDKSMLPDELFKEQAEK 350
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + +EV + + + + + + +++D+F+ A++ A +
Sbjct: 351 SVKLGVLVSKVLADAKLEVDQARVDTYIDEMASSY-EDPTEVVDYFKNDKQQRAQIEAVV 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+DHIL + ++ + +V++D L
Sbjct: 410 LEDQVVDHILAAAKVTETEVSYDDLLKEQ 438
>gi|307729637|ref|YP_003906861.1| trigger factor [Burkholderia sp. CCGE1003]
gi|307584172|gb|ADN57570.1| trigger factor [Burkholderia sp. CCGE1003]
Length = 448
Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats.
Identities = 95/461 (20%), Positives = 208/461 (45%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDAVQKEVDSRIRQLAKNVRMPGFRPGKVPLKMVTQQYSG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + + + +I + R A +PS ++ ++++
Sbjct: 61 QVEAEVLSDKVGKEFFDISRAENLRVAGQPSFAPKADAAEGA---------YAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++++ ++ + + E EIDR + + K V + + E
Sbjct: 112 YPEVKLGDVATAEIERTTTTISEAEIDRTLEILRKQRVHYHARGEAGEHGDGGADTAAKE 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+V+VD+ +D + S ++ F++G + E + GLK G+ KE + FP D
Sbjct: 172 GDRVSVDFVGKIDGEAFQGGSAEDFAFVLGEGRMLPEFEKAATGLKVGESKEFDLAFPAD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ K++AGK + ++K++ P ++ D A LG E MR +++ ++
Sbjct: 232 YHGKEVAGKTAQFTITMKKIEWPHLPEIDADFAKSLGIEDGDLTKMRAEIKDNLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP +L+E + ++ R ++ +
Sbjct: 292 RTQSIVKNQVMDALLKISELDVPNALIEQDQERLVAMARQDLEQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A+RRV G+VL + + NN++ E++++ + + + K+++ +
Sbjct: 349 AMFKEQAERRVKLGLVLAELVKANNLQAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V++ +L ++ D++V+F++L ++++
Sbjct: 408 RLAEMEAYVVEANVVEFVLSKAKVTDKEVSFEELASATAQA 448
>gi|237745590|ref|ZP_04576070.1| peptidyl-prolyl cis/trans isomerase [Oxalobacter formigenes HOxBLS]
gi|229376941|gb|EEO27032.1| peptidyl-prolyl cis/trans isomerase [Oxalobacter formigenes HOxBLS]
Length = 447
Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats.
Identities = 99/458 (21%), Positives = 207/458 (45%), Gaps = 25/458 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E L+R L + IP +T +R++ A GFRPGKVP++ + YG
Sbjct: 1 MANAVENLEKLERRLTITIPVTDITTEVEKRLKVRARTAKAPGFRPGKVPMNMVAQQYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I +E I+E + + + + + R A P G G +L +++
Sbjct: 61 QIQNEVINEKVGNAFSQAVQENNLRIAGAPRFEEKT-------GDDAGQDELAFYAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-----------VKETESEI 169
P+++I + + + + V + E+D+ + + K F +E
Sbjct: 114 YPEVKIGDLGTVDLEKAVATVTDAEVDKTLDILRKRQAHFHVKGEDSEHGKGSDNVAAED 173
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VT+D+T +D V E ++ F++G + E + + G+K + K FPE+
Sbjct: 174 GDRVTIDFTGRIDGVEFEGGKAESFPFVLGEKQMLPEFEDAIRGMKVDETKVFPLTFPEN 233
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEF 287
+ KD+AGK S+K++ ++ A LG + +R +++ +
Sbjct: 234 YHGKDVAGKTAEFTVSVKKIEWAHLPEIDETFAKALGIKDGSVEKLREDIRNNLEREVKN 293
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ K +++D + FDVP++LV+ E + + R +++ N ++V E
Sbjct: 294 RLIAINKNRVMDALIKVSEFDVPQALVKQEIGELTELTRRDLAVRNPAHKDVALPPELFT 353
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
A++RV G++LG + + N + V++++++ + + + + ++D++ P
Sbjct: 354 A----QAEKRVRLGMLLGELMKDNVLAVSDDKLKERAAEIASSY-ENPQMVIDYYLNEPG 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
EL A + E+ +D++ ++V++ V F++L
Sbjct: 409 RRKELEAMVMEENAMDYVFSKAKVVEKAVPFEELMAQQ 446
>gi|114330233|ref|YP_746455.1| trigger factor [Nitrosomonas eutropha C91]
gi|122314708|sp|Q0AJI1|TIG_NITEC RecName: Full=Trigger factor; Short=TF
gi|114307247|gb|ABI58490.1| trigger factor [Nitrosomonas eutropha C91]
Length = 438
Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats.
Identities = 106/452 (23%), Positives = 223/452 (49%), Gaps = 16/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ E+ S L+R +++ + ++ +R++ + K I+GFRPGKVP+ + YG
Sbjct: 1 MQTQEEASNPLERNIELSVSREKVEAEVGQRLKRLAPKIKIQGFRPGKVPMKIVAQQYGH 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E + E++++ E +++ + R A P+ +D + + R +++I
Sbjct: 61 QIEHEVLGELLQQQFSESINRENYRIAGVPNFESRNPGTD--------NSNYEFRATFEI 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P IE+ + + + + + ++ + EI + + + K +E + ++ GD+V ++Y S
Sbjct: 113 YPNIELGDLNSITINKPVLQIGDVEIQKTLEVLRKQRTNYESVDRPAQTGDRVNINYQGS 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D N I+G+ L + ++G+ TG +K + FPED+S K++AGKKV
Sbjct: 173 LDGKNFAGGQADNYSVILGNGHLLEDFEASILGMSTGQEKTFDMTFPEDYSGKEVAGKKV 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +V +P V+ + A LG E M+ +++ + +R K+K Q++
Sbjct: 233 TFTITLNKVEAPKLPDVDGEFAKSLGIEDGNVEKMQSEIKANLQRETTQRIRVKLKEQVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ +K + D+P+ LV+ E + ++++V+ ++ + D A+RRV
Sbjct: 293 QSLLDKISVDIPKILVQQEIDRLIEEVQDTRTARGFPKASNLQRDTFLE-----RAERRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + E + + V E+++S + + + + ++++ P + E+ + E
Sbjct: 348 RLGLILSRLIETHGLGVKPEQIKSFIEEHAQSY-ENPEQVIKWHFASPERIKEIEPLVLE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
D + IL IVD+ VTFD+L S ++
Sbjct: 407 DNAVSWILDRANIVDQNVTFDELMGYSHAANT 438
>gi|330817272|ref|YP_004360977.1| Trigger factor [Burkholderia gladioli BSR3]
gi|327369665|gb|AEA61021.1| Trigger factor [Burkholderia gladioli BSR3]
Length = 448
Score = 239 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 102/461 (22%), Positives = 216/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKEVVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + E+ + R A +PS + ++++
Sbjct: 61 QVEAEVLSDKIGQEFFEVSRTENLRVAGQPSFAPKAEAAADAYAFDA---------TFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
P+++I +V + + + EIDR + + K V F + +T ++
Sbjct: 112 YPEVKIGDLATAEVERSTTSIGDAEIDRTLDILRKQRVHFHARGEGGEHGDGGADTAAQN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + ++ F++G + E +GLK G+ +E + FPED
Sbjct: 172 GDRVTVDFVGKIDDVAFPGGTAEDFPFVLGEGRMLPEFETAALGLKVGEAREFDLTFPED 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ + A LG E + MR + +++ ++
Sbjct: 232 YHGKDVAGKTAKFTVTMKKVEWPHLPEIDGEFAKTLGIEDGDTAKMRNEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP +LVE + +++ R +++ + +
Sbjct: 292 RTQSLVKNQVMDAVLKISELDVPNALVEQDQQRLVEMARQDLAQRGVPNAANA---PIPV 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+V+ + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFKEQAERRVKLGLVIAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 448
>gi|34498014|ref|NP_902229.1| trigger factor [Chromobacterium violaceum ATCC 12472]
gi|41018170|sp|Q7NUY8|TIG_CHRVO RecName: Full=Trigger factor; Short=TF
gi|34103869|gb|AAQ60229.1| trigger factor [Chromobacterium violaceum ATCC 12472]
Length = 435
Score = 239 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 102/448 (22%), Positives = 211/448 (47%), Gaps = 15/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + L+R +++ +P + ER++ + A I+GFRPGK PL ++ YG
Sbjct: 1 MQVQLETLSNLERRMNIALPMAAIETQVAERLKRVARGAKIQGFRPGKAPLKIVEMNYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E +++ + ++++ R A P D K +++I
Sbjct: 61 QVREEVMGEQVQQGFYKAVTEQSLRVAGYPRFEPVAAGDD--------KESFKFAATFEI 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++ + V + EI++ + + K + E E+ GD+V +D+ +
Sbjct: 113 YPEVKVGELAGKEIEKPNTVVGDAEIEKTIDILRKQRTRYNRVEREAAEGDRVIIDFKGA 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E S +N F++G + +E +VG K GD K +E FPED+ KD+AGK
Sbjct: 173 IDGVAFEGGSSENFPFVLGQGQMLAEFEAGIVGAKEGDIKTVEVNFPEDYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+K V VN + A LG MRG + +++ + ++ ++K ++
Sbjct: 233 VFEILVKNVAEATLPEVNEEFAKALGISDGDVEKMRGEIRKNVEREVKRRLQARIKENVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++P++LV E ++++ R +M +++ E A+RRV
Sbjct: 293 QALIDATELELPKALVSLEIGRLVEQARRDMQQRGMNVKDMPFPPELFAA----QAERRV 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L I E N +E E++++ + + + + +L + + + L + + E
Sbjct: 349 KLGLILSEIVEANKLEAKPEQVRAMITEFADSY-EQPEDVLAWYYESADRLEGPTSMVLE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
D V++ +L +V + ++FD+L + +
Sbjct: 408 DNVVEFVLSQANVVAKDLSFDELMGSQA 435
>gi|254511171|ref|ZP_05123238.1| trigger factor [Rhodobacteraceae bacterium KLH11]
gi|221534882|gb|EEE37870.1| trigger factor [Rhodobacteraceae bacterium KLH11]
Length = 443
Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats.
Identities = 128/453 (28%), Positives = 240/453 (52%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR ++ + + L D NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 1 MQVTETLNEGLKRGYNITVTAAELDDKVNEKLVEAQPEVEMKGFRKGKVPMALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + E I + + ER A++P + + + + D+++ +SY+
Sbjct: 61 RLLGEAMQESIDGAMNKHFEDSGERPALQPEVKMT-------NEDWKEGDDVEVAMSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LPQI +++ + + + D+ ++ + +A+ F+ + +++ GD++ D+
Sbjct: 114 LPQIPEVDLKSVELEKLVVKADDAAVEEALNNLAETAQNFKGRRKGSKAKDGDQIVFDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E S ++ ++GS E LVG+K ++K++ FP ++ + LAGK
Sbjct: 174 GKVDGEEFEGGSAEDYPLVLGSNSFIPGFEEQLVGVKAEEEKDVNVTFPAEYGAEHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+IKEV P+ V+++LA + G E +A++ +++++ R +KR +L
Sbjct: 234 DAVFTCTIKEVKEPVAAEVDDELAKKFGAEDLAALKTQIAERLEAEYAGASRAVMKRGLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + K +FD+P SLVE E I ++ E N + + E ++ LA+RRV
Sbjct: 294 DILDEKVSFDLPPSLVEAEAKQIAHQLFHE---ENPDVEGENHEPVEPTDEHNKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K +EV++ EM A+ Q ++PG E++ + Q+ +LRAPIFE
Sbjct: 351 RLGLLLAELGQKAEVEVSDAEMTQAIMNQARQYPGQERQFFEFVQQNAQMQQQLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+D+I++ Q+ D++V+ D L E
Sbjct: 411 DKVVDYIVELAQVADKEVSKDDLQKAVEALEEE 443
>gi|300691403|ref|YP_003752398.1| peptidyl-prolyl cis/trans isomerase (trigger factor), molecular
chaperone involved in cell division [Ralstonia
solanacearum PSI07]
gi|299078463|emb|CBJ51115.1| peptidyl-prolyl cis/trans isomerase (trigger factor), molecular
chaperone involved in cell division [Ralstonia
solanacearum PSI07]
Length = 449
Score = 238 bits (607), Expect = 1e-60, Method: Composition-based stats.
Identities = 91/453 (20%), Positives = 197/453 (43%), Gaps = 24/453 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ + +P + R+ + + GFRPGKVP+ ++ YG+
Sbjct: 1 MSTVIENLGKLDRKVTLAVPKAEVEQEKQSRLARLSKTVKMSGFRPGKVPMKMVEKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + +I +++ + A +P + ++++
Sbjct: 61 QVEMEVRFDKAARQFFDITNEQGVKVAGQPRFELKTEGV--------ADDQFAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---------- 170
P++ I ++T+ E+ + EID+ + + K V + + E G
Sbjct: 113 YPEVNIGDLAGAELTRTKTEITDAEIDKTIDILRKQRVHYHPRGEAGEHGDGGAAIAQNV 172
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
D+VTVD+ ++D V + F++G + E + +GLK G+ K FP D+
Sbjct: 173 DRVTVDFVGTIDGVEFAGGKAEGFSFVLGEGRMLPEFEQATLGLKQGESKTFPLAFPADY 232
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFL 288
KD+AGK ++K+V +N A LG MR + +++ +
Sbjct: 233 HGKDVAGKTAEFTVTLKQVEWAHLPEINEAFAQSLGIADGSLDKMRADIRENLEREVKRR 292
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
+K Q++D + DVP+SL+E + +++ R ++ + + +
Sbjct: 293 THALLKDQVMDALLKVAELDVPKSLIEQDQERLVEMARRDLEARGMPN---VKNMPIPAE 349
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 MFTQQAERRVKLGLVLAEVVKANGLEAKPEQIKAEIEEFAKSY-EDPKEVIRWYYGDQQR 408
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQL 441
LAE+ A + E+ V++ + ++ D+ ++F++L
Sbjct: 409 LAEMEAYVLENNVVNFVCDKAKVTDKAMSFEEL 441
>gi|238026972|ref|YP_002911203.1| trigger factor [Burkholderia glumae BGR1]
gi|237876166|gb|ACR28499.1| Trigger factor [Burkholderia glumae BGR1]
Length = 448
Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 100/461 (21%), Positives = 214/461 (46%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + RI+ + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKEVVQKEIDARIQKLAKNVRMPGFRPGKVPLKMVAQQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + I + E+ + R A +PS + + ++++
Sbjct: 61 QVEAEVLSDKIGQEFFEVSRAENLRVAGQPSFAPKQDAAADAYAFDA---------TFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-----------VKETESEI 169
P+++I +V + + + EIDR + + K V + E ++
Sbjct: 112 YPEVKIGDLATAEVERSTTTIGDAEIDRTLDILRKQRVHYHVRGEGGEHGDGGAEQAAQQ 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D+V + + ++ F++G + E + +GLK G+ +E + FPED
Sbjct: 172 GDRVTVDFVGKIDDVAFQGGTAEDFPFVLGEGRMLPEFEQAALGLKVGESREFDLTFPED 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ KD+AGK + ++K+V P ++ + A LG E MR + +++ ++
Sbjct: 232 YHGKDVAGKTAKFTVTMKKVEWPHLPEIDAEFAKTLGIEDGDLAKMRAEIKENLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP +LV + +++ R ++ + +
Sbjct: 292 RTQSLVKNQVMDAVLKISELDVPNALVAQDQERLVEMARQDLVQRGVPNAATA---PIPV 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G+V+ + + N +E E++++ + + + K+++ +
Sbjct: 349 EMFKEQAERRVKLGLVIAELVKANGLEAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V+D +L ++ D++V+F+ L S+++
Sbjct: 408 RLAEMEAFVVESNVVDFVLGKAKVTDKEVSFEALASASAQA 448
>gi|323526048|ref|YP_004228201.1| trigger factor [Burkholderia sp. CCGE1001]
gi|323383050|gb|ADX55141.1| trigger factor [Burkholderia sp. CCGE1001]
Length = 448
Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 94/461 (20%), Positives = 207/461 (44%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P + + + RI + + GFRPGKVPL + Y
Sbjct: 1 MANVVENLGKLERRVTISLPKDAVQKEVDSRIRQLAKNVRMPGFRPGKVPLKMVTQQYSG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + + + + +I + R A +PS ++ ++++
Sbjct: 61 QVEAEVLSDKVGKEFFDISRTENLRVAGQPSFAPKTDAAEGA---------YAFDATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++++ ++ + + E EIDR + + K V + + E
Sbjct: 112 YPEVKLGDVATAEIERTTTTISEAEIDRTLEILRKQRVHYHARGEAGEHGDGGADTAAKE 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D + S ++ F++G + E + GLK G+ KE + FP D
Sbjct: 172 GDRVTVDFVGKIDGEAFQGGSAEDFVFVLGEGRMLPEFEKAAAGLKVGESKEFDLAFPAD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEF 287
+ K++AG + ++K++ P ++ + A LG E MR +++ ++
Sbjct: 232 YHGKEVAGNTAQFTITMKKIEWPHLPEIDAEFAKSLGIEDGDLTKMRAEIKDNLEREAKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ VK Q++D + DVP +L+E + ++ R ++ +
Sbjct: 292 RTQAIVKNQVMDALLKISELDVPNALIEQDQERLVAMARQDLEQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A+RRV G+VL + + NN++ E++++ + + + K+++ +
Sbjct: 349 AMFKEQAERRVKLGLVLAELVKANNLQAKPEQIRAEVDEFAKSY-EDPKEVVRWYYSNQQ 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E V++ +L ++ D++V+F++L ++++
Sbjct: 408 RLAEMEAYVVEANVVEFVLSKAKVTDKEVSFEELASATAQA 448
>gi|291614264|ref|YP_003524421.1| trigger factor [Sideroxydans lithotrophicus ES-1]
gi|291584376|gb|ADE12034.1| trigger factor [Sideroxydans lithotrophicus ES-1]
Length = 434
Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 92/444 (20%), Positives = 205/444 (46%), Gaps = 14/444 (3%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ GL+R L+ IP +L R++ I A + GFRPGKVP ++ YG S+
Sbjct: 3 NVETLSGLQRRLNASIPQQQLRGEMEARLKRIGRTAKVHGFRPGKVPYKVLEQQYGPSVQ 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E + E ++ E + A P I + + ++ ++++ P+
Sbjct: 63 QEVLGESLQRSFAEAAVTNKLQVAGYPQFEIKTADLNA--------PQIEYSATFEVYPE 114
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
+ + D+ V + + + +++ + + K F+ + + D+V +DY ++
Sbjct: 115 VTLGDISDVSVNRVAFTLSDADVEETIKTLRKQRAVFKKTDRAARNDDQVRIDYYGKLNG 174
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
V+ E K+V ++G + + + +VG+K G+ K + FP D+ K++AGK+V
Sbjct: 175 VVFEGGEAKDVPLVLGVGRMLPDFEKAIVGMKAGETKSFDMTFPADYHGKEVAGKQVTFT 234
Query: 244 FSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++ V V+ + A LG E ++ I + ++ V+ + K +D +
Sbjct: 235 ITVHAVEEAELPEVDAEFARSLGLEDGDVDKLKAEIRDNIGREAQRRVKVRNKDSAMDAL 294
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+VP+SL+E+E ++Q+ +M S K + + + A +RV G
Sbjct: 295 LKISELEVPKSLLESEAQNLMQQTLQDMESRGMK---IPKGMQLPADMFVERATKRVKLG 351
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++L + +K++++ E++++ + + + H ++++ + P L E+ + ED V
Sbjct: 352 LILAELVKKHDLQAKPEQVKALVQEYAQSY-EHPEEVVRWYNSDPARLREVENLVLEDNV 410
Query: 422 IDHILKSVQIVDRKVTFDQLFDNS 445
+ ++ ++ D+ VT ++L ++
Sbjct: 411 VAWVMAGAKVGDQAVTLNELMGSN 434
>gi|302878844|ref|YP_003847408.1| trigger factor [Gallionella capsiferriformans ES-2]
gi|302581633|gb|ADL55644.1| trigger factor [Gallionella capsiferriformans ES-2]
Length = 432
Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats.
Identities = 88/443 (19%), Positives = 194/443 (43%), Gaps = 15/443 (3%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ L+R L+ IP L R++ I A I GFRPGK+P ++ YG
Sbjct: 3 SVETVSALERRLNATIPQQALRTQVANRLKHIGRTAKIAGFRPGKIPAKVLEQHYGMEAR 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E + +++ ++ R A P T+ +++ ++++ P+
Sbjct: 63 QEALGHALQQSFATAVAAEALRVAGDPEFTVKT--------SDWNAEEIEYSATFEVYPE 114
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
+ + V + E+ + ++D +A + K FE + + DKV +D+ ++D
Sbjct: 115 VVLGDVAAESVERATYELSQADVDNTIATLRKQRATFESVDRAAASDDKVVIDFVGTLDG 174
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
V+ + K +GS + E + G+K G+ K + FPE++ KD+AGK+V
Sbjct: 175 VVFQGGEAKEYPVELGSGRMLPEFEAAIAGMKVGETKSFDMTFPENYHGKDVAGKQVTFA 234
Query: 244 FSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++ V + VN + A+ +G + + + + ++ + K +D +
Sbjct: 235 ITLNSVEGRVLPEVNAEFAMSVGIVDGDVAKLADEIRSNLDREVTRRLKGRNKDAAMDVL 294
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
F++P +LV+ E ++++ +M + + E + A++RV G
Sbjct: 295 VKVAQFELPIALVQWESQRLMEQTVQDMEKRGMAMKGMQLPAELFKE----RAEKRVKLG 350
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++L + EK +++ E++++ + F H ++++ + P E+ + E+ V
Sbjct: 351 LILADLVEKFDLKAQPEKVRTLVEDYAQSF-EHPEEVVRWYYADPARFQEIENLVLEENV 409
Query: 422 IDHILKSVQIVDRKVTFDQLFDN 444
++ +L ++ D+ + F +L N
Sbjct: 410 VEWVLSRAKVADKAIAFAELMGN 432
>gi|198283158|ref|YP_002219479.1| trigger factor [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665513|ref|YP_002425387.1| trigger factor [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247679|gb|ACH83272.1| trigger factor [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517726|gb|ACK78312.1| trigger factor [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 434
Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats.
Identities = 99/452 (21%), Positives = 201/452 (44%), Gaps = 30/452 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ + L+R + V IP++ + ++R+ + A + GFRPGK P++ I+ YG
Sbjct: 8 MQISTPEAAPLERHIHVTIPASEVESGVSQRLRNKARSARLPGFRPGKAPMTLIERHYGS 67
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
L ET D +I E + + R RP + + +G DL ++
Sbjct: 68 DALMETFDHLINERYSQAVRDESLRPVGRPEVQVEKGGR---------GEDLVFTAVVEV 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + D V + EV + ++D + + + + E ++ D+VTVD+ +
Sbjct: 119 YPEFDPQ-VPDATVIRKTAEVTDADVDATIDIMRQQRRFYVSAERPAQDEDRVTVDFQGT 177
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V + N ++GS L + + L+G+ G+ + + FP ++ + +LAG+
Sbjct: 178 IDGVPMAGGDVTNYSVVLGSGRLLPDIEQGLLGMSAGEDRTVAVQFPAEYHVAELAGQAA 237
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++EV +P V+ A+ LG E +R + +++ ++ + R +VK QIL
Sbjct: 238 QFHLQVREVAAPQLPEVDAAFALALGIEDGDVAVLRQEVRENLEREAQRISRGQVKAQIL 297
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + D+P ++ E + + LA+RRV
Sbjct: 298 DLVVASNHPDLPRQMIGQELERLQKDANAAAGG-----------------DLDALARRRV 340
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ G+VL I + + + E+ + ++ ++ + ++ P + + A + E
Sbjct: 341 VLGLVLSEIVRREKLRASPAEVTQVIRDMSEQY-EDPEQFISWYRSNPEQMEQAEALVLE 399
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
DKV+ +L+ V++ D V+F+QL +
Sbjct: 400 DKVVAWLLERVKVSDEAVSFNQLIGRAPTGET 431
>gi|83943156|ref|ZP_00955616.1| trigger factor [Sulfitobacter sp. EE-36]
gi|83954291|ref|ZP_00963011.1| trigger factor [Sulfitobacter sp. NAS-14.1]
gi|83841328|gb|EAP80498.1| trigger factor [Sulfitobacter sp. NAS-14.1]
gi|83846164|gb|EAP84041.1| trigger factor [Sulfitobacter sp. EE-36]
Length = 443
Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats.
Identities = 129/453 (28%), Positives = 238/453 (52%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 1 MQVNETLNEGLKRGYAITVTAAELEAKVNEKLAEAQPEVEMKGFRKGKVPMALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + E I + E K +R AM+P + + + + D+++ ++Y+
Sbjct: 61 KVMGEAMQESIDGAMQEHFEKSGDRPAMQPDVKM-------ANEDWKEGDDVEVTMTYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I + + + + + D+ ++ +A +A+ FE +E ++E GD++T D+
Sbjct: 114 LPDIPEVDLSSITLEKMVVKADDAAVEEALANLAETAQDFEAREEGAKAEDGDQITFDFL 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + ++ ++GS E LVG+ GD+K++ FPED+ LAGK
Sbjct: 174 GKVDGEAFEGGAAEDYPLVLGSNSFIPGFEEQLVGVVAGDEKDVTVSFPEDYQAPHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +KEV P+ V+++LA + G E +A++ +++++ R +KR +L
Sbjct: 234 EAVFECKVKEVKKPVAAKVDDELAKKFGAEDLAALKSQIAERLEAEYAGASRAVMKRGLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +FD+P SLVE E I ++ E N Q D + E + LA+RRV
Sbjct: 294 DELDKLVSFDLPPSLVEAEAGQIAHQLWHE---DNPDVQGHDHPEIETTDEHKKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K ++VT+ EM A+ Q ++PG E++ + Q+ ++RAP+FE
Sbjct: 351 RLGLLLAELGQKAEVQVTDAEMTQAIMNQARQYPGQERQFFEFVQQNQQMQQQMRAPLFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+DH+ + + +++V+ + L E E
Sbjct: 411 DKVVDHVFEQATLNEKEVSKEDLQKAVEELEDE 443
>gi|119898363|ref|YP_933576.1| trigger factor [Azoarcus sp. BH72]
gi|171704431|sp|A1K784|TIG_AZOSB RecName: Full=Trigger factor; Short=TF
gi|119670776|emb|CAL94689.1| trigger factor [Azoarcus sp. BH72]
Length = 437
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 99/451 (21%), Positives = 206/451 (45%), Gaps = 19/451 (4%)
Query: 1 MQVIEK---FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSL 57
MQ ++ L+R +D+ + + + R++ + + GFRPGKVPL ++
Sbjct: 1 MQTTQEIQTSQNPLERRIDMSLAVADIDKAVEARLKQMARSVKMPGFRPGKVPLKIVEQT 60
Query: 58 YGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
YG SE I ++ E + +++ R A P I E S+ L+
Sbjct: 61 YGPQARSEAIGAAVERAFGEKVREQNLRVAGYPRIEPKEAGSEGA---------LEFSAV 111
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+++ P++ + + Q V + E+D+ + + K FE ++ GD+VT+D+
Sbjct: 112 FEVYPEVVVGDLSAQSIEQPTLVVGDAEVDKTIDVLRKQRTTFEAAARPTQDGDRVTIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
D + E + F++G+ + + +VGL G+ K + FPED+ K LAG
Sbjct: 172 AGRKDGELFEGGQATDFPFVIGAGSMLKDFETAVVGLGVGETKTFDMTFPEDYHAKHLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ V+ ++K V +P V++D A LG +R +++ + ++ KVK
Sbjct: 232 QPVQFEVTLKSVEAPKLPEVDSDFAKALGVADGNVDKLREEVKGNLEREVKRRIQAKVKE 291
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
Q +D + +VP++LVE+E + + + ++++ ++++ A
Sbjct: 292 QAMDALLAVTPIEVPKALVESEATQLAENAKRDLAARGMNTKDIPVQPAWFGD----QAM 347
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
RRV G+++ + + N + E+++ + + + +++ + P+ LA+ A
Sbjct: 348 RRVKLGLIMAEVVKGNELHAKPEQIRGLVEEMAQSY-EDPSELVRWYYAQPDRLAQAEAV 406
Query: 416 IFEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ ED V+ +L Q ++ + FD L N++
Sbjct: 407 VIEDNVVAWVLSKAQTSEKSIAFDDLMGNAA 437
>gi|148359407|ref|YP_001250614.1| trigger factor TF [Legionella pneumophila str. Corby]
gi|166229897|sp|A5ID18|TIG_LEGPC RecName: Full=Trigger factor; Short=TF
gi|148281180|gb|ABQ55268.1| trigger factor TF (FKBP-type peptidyl prolyl cis-trans isomerase)
[Legionella pneumophila str. Corby]
Length = 459
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 96/457 (21%), Positives = 209/457 (45%), Gaps = 14/457 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R++ V +P+ ++ + + R+ ++ K I GFRPGKVP + +KS +
Sbjct: 1 MQVSVETLEGLERKVTVSVPTEKVEEEVSSRLRNLARKVKIDGFRPGKVPFNVVKSRFSD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E E+++ + E L K + A P + E IE D K +++
Sbjct: 61 SVREEVAREMVQSTLYEALQKNELVPAGYPHVEPLE---------IEPGKDFKYTAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P EI + V EV +K++D + ++ + N + + GDKV +D+
Sbjct: 112 MPVFEIVELNQAPVELIQSEVTDKDVDNMIEKLREQNKEWHEVTHAVKKGDKVVIDFQGF 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D+ + S + + ++GS + + +VG K +I+ FPED+ KDLAGK+
Sbjct: 172 LDDKPFQGGSAEGYELVIGSGSMIPGFEDGIVGGKIDKPFDIKVSFPEDYGHKDLAGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+IK++ ++ A + + +++ + + + E V + ++
Sbjct: 232 TFKITIKKIMEGKLPALDEAFAEKFNIKEGGIESLKKDIRENMARELERRVNMMNREKLF 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + ++P +L++ E + + + + ++ + I + + + AKRRV
Sbjct: 292 DSLMSVNHVELPIALIDKEIEHLKHDMYHRLF--GHEHKDDEKIPDFPRELFEEQAKRRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ +K+ I +++ + + + + ++ +Q +AE+ A + E
Sbjct: 350 HLGLLFAEYVKKHEIVADNDKVNAMIDKFASAY-ESPDELRAWYQSSKEHMAEVEALVME 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
D V D I + ++ + + +D + + + + L
Sbjct: 409 DMVADKIAEDAKLKYKNMDYDSVMNPKKGTEKKGELA 445
>gi|207724192|ref|YP_002254590.1| peptidyl-prolyl cis/trans isomerase (trigger factor) (tf) protein
[Ralstonia solanacearum MolK2]
gi|206589402|emb|CAQ36364.1| peptidyl-prolyl cis/trans isomerase (trigger factor) (tf) protein
[Ralstonia solanacearum MolK2]
Length = 449
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 91/460 (19%), Positives = 199/460 (43%), Gaps = 24/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ + +P + R+ + + GFRPGKVP+ ++ YG+
Sbjct: 1 MSTVIENLGKLDRKVTLAVPKAEVEQEKQSRLARLSKTVKMSGFRPGKVPMKMVEKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + +I +++ + A +P + + ++++
Sbjct: 61 QVEMEVRFDKAARQFFDITNEQGVKVAGQPRFELKTEGV--------SDDQVAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------G 170
P++ + ++T+ E+ + EID+ + + K V + + E G
Sbjct: 113 YPEVALGDLAGAELTRTKTEITDAEIDKTIDILRKQRVHYHPRGEAGEHGDGGEAVAQNG 172
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
D+VTVD+ ++D V + F++G + E + +GLK G+ K FP D+
Sbjct: 173 DRVTVDFVGTIDGVEFAGGKAEGFGFVLGEGRMLPEFEQATLGLKQGESKVFPLAFPADY 232
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFL 288
KD+AGK ++K+V +N A LG MR + +++ +
Sbjct: 233 HGKDVAGKTAEFTVTLKQVEWAHLPEINEAFAQSLGIADGSLDKMRADIRENLEREVKRR 292
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
+K Q++D + DVP+SLVE + +++ R ++ + + +
Sbjct: 293 THALLKDQVMDALLKVAELDVPKSLVEQDQERLVEMARRDLEARGMPN---VKNMPIPAE 349
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 MFAQQAERRVKLGLVLAEVVKANGLEAKPEQVKAEIEEFAKSY-EDPKEVIRWYYGDQQR 408
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E+ V++ + ++ D+ ++F++L +
Sbjct: 409 LAEMEAYVLENNVVNFVCDKAKVTDKAMSFEELTAAPAAQ 448
>gi|300703971|ref|YP_003745573.1| peptidyl-prolyl cis/trans isomerase (trigger factor), molecular
chaperone involved in cell division [Ralstonia
solanacearum CFBP2957]
gi|299071634|emb|CBJ42958.1| peptidyl-prolyl cis/trans isomerase (trigger factor), molecular
chaperone involved in cell division [Ralstonia
solanacearum CFBP2957]
Length = 449
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 91/453 (20%), Positives = 198/453 (43%), Gaps = 24/453 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ + +P + R+ + + GFRPGKVP+ ++ YG+
Sbjct: 1 MSTVIENLGKLDRKVTLAVPKAEVEQEKQSRLARLSKTVKMSGFRPGKVPMKMVEKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + +I +++ + A +P + + ++++
Sbjct: 61 QVEMEVRFDKAARQFFDITNEQGVKVAGQPRFELKTEGV--------SDDQVAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------G 170
P++ + ++T+ E+ + EID+ + + K V + + E G
Sbjct: 113 YPEVALGDLAGAELTRTKTEITDAEIDKTIDILRKQRVHYHPRGEAGEHGDGGEAVAQNG 172
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
D+VTVD+ ++D V + F++G + E + +GLK G+ K FP D+
Sbjct: 173 DRVTVDFVGTIDGVEFAGGKAEGFGFVLGEGRMLPEFEQATLGLKQGESKVFPLAFPADY 232
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFL 288
KD+AGK ++K+V +N A LG MR + +++ +
Sbjct: 233 HGKDVAGKTAEFTVTLKQVEWAHLPEINAAFAQSLGIADGSLDKMRADIRENLEREVKRR 292
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
+K Q++D + DVP+SLVE + +++ R ++ + + +
Sbjct: 293 THALLKDQVMDALLKVAELDVPKSLVEQDQERLVEMARRDLEARGMPN---VKNMPIPAE 349
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 MFTQQAERRVKLGLVLAEVVKANGLEAKPEQVKAEIEEFAKSY-EDPKEVIRWYYGDQQR 408
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQL 441
LAE+ A + E+ V++ + ++ D+ ++F++L
Sbjct: 409 LAEMEAYVLENNVVNFVCDKAKVTDKAMSFEEL 441
>gi|237653231|ref|YP_002889545.1| trigger factor [Thauera sp. MZ1T]
gi|237624478|gb|ACR01168.1| trigger factor [Thauera sp. MZ1T]
Length = 435
Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 93/449 (20%), Positives = 210/449 (46%), Gaps = 16/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + L+R +D+ + + + R++ + + GFRPGKVP+ + +G
Sbjct: 1 MEQNQVTPSALERRIDISVSLADIEKEVDARLKRMARTVKMPGFRPGKVPMKIVAQTHGG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + +++ E + + R A PSI +G ++ L+ +++
Sbjct: 61 QARGEAVGAAVEKAFGEKVRADNLRVAGYPSIEPKDGAAE---------GTLEFTAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P + + F ++ + + EV + E+D+ + + K +F+ E + GD+V +D+T
Sbjct: 112 YPDVVLGEFAGRKIERPVLEVGDAEVDKTIEVLRKQRTSFKAVERAAAQGDRVVIDFTGR 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + + ++ F+VG+ + + + +VGL G+ K + FPED+ +LAGK+V
Sbjct: 172 MGGEVFDGGQAQDFPFVVGAGSMLKDFEDAVVGLAAGEGKTFDMTFPEDYHAANLAGKQV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V P+ V+ D A LG +R +++ + ++ ++K Q++
Sbjct: 232 QFEITVKAVEEPVLPEVDTDFAKSLGVADGDVAKLREEVKGNLEREVKRRIQSRLKEQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +VP++LV+ E N + R ++ K++++ A+RRV
Sbjct: 292 DALIEVAPIEVPKALVQAESNQLADNARRDLEMRGLKTKDIPVDPSWFKD----QAERRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + + + + E++++ + + + +++ + P LA+ A + E
Sbjct: 348 KLGLIMAELVKTSELHAKPEQIRALVEEMAQSY-EDPSELVRWYYAQPERLAQAEAVVIE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
D V++ + D+ V FD+L N++
Sbjct: 407 DNVVEWVCAKADTSDKDVAFDELMGNNAA 435
>gi|207743048|ref|YP_002259440.1| peptidyl-prolyl cis/trans isomerase (trigger factor) (tf) protein
[Ralstonia solanacearum IPO1609]
gi|206594445|emb|CAQ61372.1| peptidyl-prolyl cis/trans isomerase (trigger factor) (tf) protein
[Ralstonia solanacearum IPO1609]
Length = 449
Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 90/460 (19%), Positives = 199/460 (43%), Gaps = 24/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ + +P + R+ + + GFRPGKVP+ ++ YG+
Sbjct: 1 MSTVIENLGKLDRKVTLAVPKAEVEQEKQSRLARLSKTVKMSGFRPGKVPMKMVEKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + +I +++ + A +P + + ++++
Sbjct: 61 QVEMEVRFDKAARQFFDITNEQGVKVAGQPRFELKTEGV--------SDDQVAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------G 170
P++ + ++T+ E+ + EID+ + + K V + + E G
Sbjct: 113 YPEVALGDLAGAELTRTKTEITDAEIDKTIDILRKQRVHYHPRGEAGEHGDGGEAVAQNG 172
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
D+VTVD+ ++D V + F++G + E + +GLK G+ K FP D+
Sbjct: 173 DRVTVDFVGTIDGVEFAGGKAEGFGFVLGEGRMLPEFEQATLGLKQGESKVFPLAFPADY 232
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFL 288
KD+AGK ++K+V +N A LG MR + +++ +
Sbjct: 233 HGKDVAGKTAEFTVTLKQVEWAHLPEINEAFAQSLGIADGSLDKMRADIRENLEREVKRR 292
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
+K Q++D + DVP+SL+E + +++ R ++ + + +
Sbjct: 293 THALLKDQVMDALLKVAELDVPKSLIEQDQERLVEMARRDLEARGMPN---VKNMPIPAE 349
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 MFAQQAERRVKLGLVLAEVVKANGLEAKPEQVKAEIEEFAKSY-EDPKEVIRWYYGDQQR 408
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E+ V++ + ++ D+ ++F++L +
Sbjct: 409 LAEMEAYVLENNVVNFVCDKAKVTDKAMSFEELTAAPAAQ 448
>gi|254486150|ref|ZP_05099355.1| trigger factor [Roseobacter sp. GAI101]
gi|214043019|gb|EEB83657.1| trigger factor [Roseobacter sp. GAI101]
Length = 444
Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 122/454 (26%), Positives = 235/454 (51%), Gaps = 12/454 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR + + + L NE++ + + + +KGFR GKVP++ +K +G
Sbjct: 1 MQVNETLNEGLKRGYAITVTAAELEAKVNEKLAEAQPEVEMKGFRKGKVPMAMLKKQFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I+ E + E I + E K +R AM+P + + ++ + D+++ ++Y+
Sbjct: 61 KIMGEAMQESIDGAMQEHFEKSGDRPAMQPDVKM-------SNEDWKEGDDVEVTMTYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP+I + + + + + D+ +D +A +A+ F+ ++ +S+ GD++ D+
Sbjct: 114 LPEIPEVDLSSITLEKMVVKADDAAVDEALANLAETAQDFKARKAGVKSKDGDQIVFDFL 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + ++ ++GS + LVG+ ++K++ FPED+ LAGK
Sbjct: 174 GKVDGEAFEGGAAEDYPLVLGSNSFIPGFEDQLVGVVADEEKDVTVSFPEDYQAPHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ IKEV P+ ++++LA + G E A++ +++++ R +KR +L
Sbjct: 234 EAVFECKIKEVKKPVAAKIDDELAKKFGAEDLEALKKQIAERLEAEYAGASRAVMKRGLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +FD+P SLVE E I ++ E N Q D + E + LA+RRV
Sbjct: 294 DALDKLVSFDLPPSLVEAEAGQIAHQLWHE---ENPDVQGHDHPEIETTDEHKALAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K + V++ EM A+ Q ++PG E++ + Q+ ++RAP+FE
Sbjct: 351 RLGLLLAELGQKAEVSVSDAEMTQAIMNQARQYPGQERQFFEFVQQNQQMQQQMRAPLFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
DKV+D++ + + +++V+ + L E+
Sbjct: 411 DKVVDYVFEQATLNEKEVSKEDLQKAVEALEDEE 444
>gi|71907349|ref|YP_284936.1| trigger factor [Dechloromonas aromatica RCB]
gi|119370892|sp|Q47FB5|TIG_DECAR RecName: Full=Trigger factor; Short=TF
gi|71846970|gb|AAZ46466.1| Trigger factor [Dechloromonas aromatica RCB]
Length = 434
Score = 237 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 94/446 (21%), Positives = 201/446 (45%), Gaps = 16/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + L+R +D+ I + +R++ + + GFRPGKVP + +K YG
Sbjct: 1 MEATTAQANELERRVDLSIAIADVEKEMEQRLKRMGKNMKVPGFRPGKVPFNIVKQQYGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + E + + E ++++ R A P I E L+ +++
Sbjct: 61 QARHEVLSEELDRVFGETVTEKKMRVAGYPRIEPKTT---------ESNSHLEFSAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +V + + EV E+D+ + + K V++ + + D+V +D+T
Sbjct: 112 YPEFTPGDLSGSEVERPVLEVSAAEVDKTLDILRKQRVSYADADRAAAKEDRVVIDFTGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D V + F++G + + + G K G+ K + FP D+ KDLAG+ V
Sbjct: 172 KDGVPFPGGQANDYPFVLGQGMMLPDFENAVEGAKAGETKTFDLTFPADYHAKDLAGQTV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K+V +P+ ++ + A +G + MR +K+ + + K+K Q++
Sbjct: 232 QFDITVKQVQAPVLPELDAEFATSMGIADGDVTKMRAEIEANLKREVKRRIEGKLKDQVM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV+ E ++Q R +M K +++ E AKRRV
Sbjct: 292 EALLKANPITVPVALVDMEIQRLMQAARQDMEQRGMKVKDMPIQPEWFAD----QAKRRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + + ++ + E++++ + + + H ++++ + P L E+ E
Sbjct: 348 TLGLILAEVVKTEKLQASPEQVRTMVEETAQSY-EHPEEVIRWYYAQPQRLQEVEGVAIE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDN 444
+ V++ +L ++ ++ FD+L
Sbjct: 407 NNVVEWVLSKAKVTEKAAVFDELMGQ 432
>gi|58580655|ref|YP_199671.1| trigger factor [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58425249|gb|AAW74286.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 493
Score = 236 bits (602), Expect = 4e-60, Method: Composition-based stats.
Identities = 89/445 (20%), Positives = 196/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 64 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 123
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 124 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGETDFDFVATFEV 170
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + EV + +ID+ + + + E ++ GD V ++
Sbjct: 171 VPDFGDIDVTTLSVVRATAEVTDADIDQMIENLRLQRRIWNPVERGAQAGDLVALETWSQ 230
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + ++GS +F + + L GL G++K + FP + + LAGK V
Sbjct: 231 AGDERLPADGVETGSSVLGSGVMFDQIEKGLEGLTKGEEKTLSVDFPAEWRVPQLAGKTV 290
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ V+ + G + R +++ + + +++R++
Sbjct: 291 QVHVKAVEVSEPVLPAVDKEFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 350
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + ++ + + + + + Q + A +R
Sbjct: 351 EQLIAAYAHVEMPPRLVENEARSMLAQQVEQVRRSGR---DPGQVPADAHQGFMDAAAKR 407
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + L + +++++ ++ P + L++ +
Sbjct: 408 VLVGLLVGEVARRNELRLESRRVSDTLRLIASTY-EEPEQVIEMYRNDPQLMNGLQSRVM 466
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + Q ++ ++F
Sbjct: 467 EEQVIDWIAERAQHTEQSLSFQDAI 491
>gi|149913885|ref|ZP_01902417.1| trigger factor [Roseobacter sp. AzwK-3b]
gi|149812169|gb|EDM72000.1| trigger factor [Roseobacter sp. AzwK-3b]
Length = 443
Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats.
Identities = 135/453 (29%), Positives = 241/453 (53%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR +I+ + L D E++++ + +KGFR GKVPL+ +K +G+
Sbjct: 1 MQVTETQNEGLKRAYKMILTAQELEDKVTEKLKEAQPDVALKGFRKGKVPLALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + E + + ++ ER A P++ + + + D+++ +SY+
Sbjct: 61 RVLGEAMQEAVDGAMSAHFEEKGERPAAEPAVKMV-------NEDWKEGDDVEIEMSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP+I ++V + + + D+ +D + +A++ F+ ++ +S+ GD+V +D+
Sbjct: 114 LPEIPEVDLSAIKVERLVAKADDAAVDEALKNLAESAQDFKDRKKGSKSKDGDQVVIDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E S ++ +GS + LVG+K G++K++ FP+++ LAGK
Sbjct: 174 GKVDGEAFEGGSAEDYPLALGSNSFIPGFEDQLVGVKVGEEKDVTVKFPDEYQAAHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
IKE+ P+ +N+DLA + G ES A++ ++++ R +KR +L
Sbjct: 234 DAVFECKIKEIKEPVAAEINDDLAQKYGAESLDALKDQIKERLEAEYAGAARAVMKRHLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + FD+P S+VE E N I ++ E N + Q D + E + + LA+RRV
Sbjct: 294 DEMDKLVDFDLPPSMVEAEANQIAHQLWHE---ENPEVQGHDHPEIEPTEEHTKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K +EVT+ EM A+ QQ ++PG E++ + Q P +LRAPIFE
Sbjct: 351 RLGLLLAHLGQKAEVEVTDAEMTQAVMQQARQYPGQERQFFEFVQNNPQMRQQLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKVID++ + Q+ +++ T D+L E
Sbjct: 411 DKVIDYVAELAQVTEKESTKDELEKAVEAMDEE 443
>gi|307250782|ref|ZP_07532712.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306857181|gb|EFM89307.1| Trigger factor [Actinobacillus pleuropneumoniae serovar 4 str. M62]
Length = 429
Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats.
Identities = 77/444 (17%), Positives = 210/444 (47%), Gaps = 17/444 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
+ EGL+R + + + ++++ ++ E+++ A + GFR GKVP + I+ +G +
Sbjct: 1 METLEGLQRRVTITVAADKIEAAYKEQLKGYAKNARVDGFRKGKVPHAIIEQRFGLAARQ 60
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
+ + + ++ + + A RP+ T N + + + ++++ P++
Sbjct: 61 DVLSDEMQRAFFDAVIAEKINLAGRPTFTPN---------NYQPSQEFSFTATFEVFPEV 111
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNV 184
E+ ++++V + + E+ E ++D+ + + K + + ++ D+V +D+ SVD
Sbjct: 112 ELKGLENIEVEKPVVEITEADLDKMIDVLRKQQATWAESQAAAQAEDRVVIDFVGSVDGE 171
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
E + +G + + E +VG K G+Q +I+ FPE++ ++L GK +
Sbjct: 172 EFEGGKATDFTLAMGQSRMIPGFEEGIVGHKAGEQFDIDVTFPEEYHAENLKGKAAKFAI 231
Query: 245 SIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
++K+V + + + + + ++ +R + +++ + V +VK Q+++ +
Sbjct: 232 TLKKVENIVLPELTEEFVKKFGSAKTVEDLRAEIKKNMQRELKNAVTARVKNQVINGLIA 291
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
+ +VP + V E + + ++ + + + + + AKRRV G++
Sbjct: 292 QNEIEVPAAAVAEEVDVLRRQAVQRFGGKPEMAAQL------PAELFEADAKRRVQVGLL 345
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
L T+ N ++V E+ ++ + + + +++ H+ K +R + E++ ++
Sbjct: 346 LSTVIGTNELKVDEKRVEETIAEIASAY-EQPAEVVAHYAKNRQLTENIRNVVLEEQAVE 404
Query: 424 HILKSVQIVDRKVTFDQLFDNSSE 447
+L ++ ++ +FD++ ++
Sbjct: 405 VVLAKAKVTEKATSFDEVMAQQAQ 428
>gi|319638310|ref|ZP_07993073.1| trigger factor [Neisseria mucosa C102]
gi|317400583|gb|EFV81241.1| trigger factor [Neisseria mucosa C102]
Length = 436
Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats.
Identities = 98/448 (21%), Positives = 209/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P +++ ++++ + +A I GFRPGK P I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSKINAETEKKLKQTQRRAKIDGFRPGKAPFKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D S K+ +++
Sbjct: 61 SAQNDVINELVQREFYDVAVAQELKVAGYPRFEAVEEQDDQES--------FKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F + E++ GD+V +D+
Sbjct: 113 FPEVTIGDLSAQEVEKVTATVGDAEVDQTVEILRKQRTRFNHVDREAQNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKSA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V VN D A LG E MR + + + E + ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVNTDFAKALGIEDGDVAKMREEVKKNVGREVERRIGEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKATDLQVPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + E+N +E TE+++++ + + ++++D + P+ L + E
Sbjct: 350 ALGLILAKLVEENKLEPTEDQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQGPTSLAVE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLSKAKVTEKALSFDEVMGAQA 436
>gi|257093848|ref|YP_003167489.1| trigger factor [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257046372|gb|ACV35560.1| trigger factor [Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 446
Score = 236 bits (600), Expect = 7e-60, Method: Composition-based stats.
Identities = 100/441 (22%), Positives = 200/441 (45%), Gaps = 16/441 (3%)
Query: 8 SEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETI 67
+ L+R LD+ + L ++R++ + + GFRPGKVP ++ +G+ E +
Sbjct: 20 TNALERRLDLSVDLAELDKEVDQRLKRLGKNMKMAGFRPGKVPAGIVRQQHGEQARHEAL 79
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
+ + + E ++ + R A P I S T ++ +++ P+I ++
Sbjct: 80 GDALGRLFSEAITAQQLRVAGGPRIE---------SRNTGSTTHIEFSAVFEVYPEIALN 130
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ + + + EV EID + + K V +E + + D+VT+D+
Sbjct: 131 DLTGVTIERPLLEVGPAEIDGTIEILRKQRVRYEPVDRAAATADRVTIDFLGKKAGEPFP 190
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ +F++G + S+ ++G G+ K E FP ++ KDLAG+ V + ++K
Sbjct: 191 GGQGTDYRFVLGEGKMLSDFENAVIGTSAGESKSFEMTFPAEYFAKDLAGQSVTFDITVK 250
Query: 248 EVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
EV +P+ + D A LG E MR +K+ + ++ KV Q++D +
Sbjct: 251 EVGAPILPEADADFAKGLGVEDGDIVKMRAEIEANLKREVKRRLQAKVTGQVMDSLLQAN 310
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLG 365
DVP +LV+ E ++Q R +M K +++ E A+RRV G+++
Sbjct: 311 PIDVPSALVDREVERLMQVARQDMEQRGMKVKDLPMQPEWFAD----QARRRVSLGLIMA 366
Query: 366 TIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHI 425
+ + +E +++++ + + H ++++ + P LAE E V+D +
Sbjct: 367 EVVRVHGLEAKPQQVRAMVVD-AAQSYEHPEEVVRWYYAQPERLAEFEGAAVEANVVDWV 425
Query: 426 LKSVQIVDRKVTFDQLFDNSS 446
L VQ V++ V F +L +
Sbjct: 426 LTQVQGVEKPVAFGELMGQNP 446
>gi|254454657|ref|ZP_05068094.1| trigger factor [Octadecabacter antarcticus 238]
gi|198269063|gb|EDY93333.1| trigger factor [Octadecabacter antarcticus 238]
Length = 443
Score = 236 bits (600), Expect = 8e-60, Method: Composition-based stats.
Identities = 119/453 (26%), Positives = 228/453 (50%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V E ++GLKR ++ I + L E++++ + + +KGFR GKVP++ +K +G
Sbjct: 1 MTVKETLNDGLKRGYEIKITAAELDAKVLEKLKEAQPEVEMKGFRKGKVPMAMMKKQFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + E + + L +R AM+P + + + + D+ + +SY+
Sbjct: 61 KVLGEAMQESVDGAMNTHLETSGDRPAMQPEMKM-------ANDEWKEGDDVVVNVSYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP + F +++ + + + D++ + + +A+ F+ ++T +++ GD+V D+
Sbjct: 114 LPVVPEVDFSKIKLEKLVVKADDESVQEALTSLAETAKNFDDRKTGSKAKDGDQVIFDFL 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + + +GS E L+G+K G+ K +E FP D++ + LAGK
Sbjct: 174 GKVDGEPFEGGAAEGHALELGSGQFIPGFEEGLIGVKAGEDKNVEVTFPADYNAEHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I V P +++++A + G E + ++G + K+++ R KR +L
Sbjct: 234 VAVFECKILNVKEPKTSEIDDEMAKQFGAEDLAGLKGQITSKLEEEYAGAARAVTKRALL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +F++P SLVE E I ++ E N + + D + E + + LA RRV
Sbjct: 294 DELDKMVSFELPPSLVEAEAGQIAHQLWHE---DNPEVEGHDHPEIETTEEHTKLADRRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG+K I V++ E A+ Q ++ ++ + QK P ++RAP+FE
Sbjct: 351 KLGLLLAEIGQKAEIHVSDAEFTQAVMNQARQYGDQARQFFEFVQKNPQMQQQIRAPLFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+DHI+++ + +++V+ D L E
Sbjct: 411 DKVVDHIVEAAAMKEKEVSKDDLQKAVEALEEE 443
>gi|111018383|ref|YP_701355.1| trigger factor [Rhodococcus jostii RHA1]
gi|118574085|sp|Q0SGY9|TIG_RHOSR RecName: Full=Trigger factor; Short=TF
gi|110817913|gb|ABG93197.1| FKBP-type bacterial trigger factor [Rhodococcus jostii RHA1]
Length = 464
Score = 236 bits (600), Expect = 8e-60, Method: Composition-based stats.
Identities = 87/478 (18%), Positives = 204/478 (42%), Gaps = 23/478 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F++ + + + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFEELKPDFDKAYKALAQQIRLPGFRPGKAPAKLLEARVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + +++ + E ++ +A +P I I + IE L+ D
Sbjct: 61 GAVLEQVVNDALPSRYSEAVTSASVKAIGQPEIEITK---------IEDGELLEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + + +L VT D E+ ++ ++ Q+ + + E E GD +++D +
Sbjct: 112 VRPEITLPDYSELSVTVDPIEITDEAVEEQLLSLRQRFGTLTGVERAVEDGDFISIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + VGS L E +VG+K G+ KE D AGK+
Sbjct: 172 TVDGEAVPEATASGLSHEVGSGQLIEGLDEAVVGVKAGESKEFTSTLVAG----DHAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ V +++ A F++ ++ +++ + + +++ ++L
Sbjct: 228 AVVTVTVGTVKERELPAEDDEFAQLASEFDTLDELKADLRERVARVRKVEQAGQIRDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHMLA 354
+ + +PE++V+ E + L + N+ + + EE + A
Sbjct: 288 ETLLETVEVPLPEAVVKAEVDAALHDAVHGLDHDEEALNKLLEEQGTSREEFDKDAKESA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+R V T ++L I + +++ V ++E+ + Q R+ ++ + Q+ L + A
Sbjct: 348 ERSVKTQLLLDAIADASDVTVGQDELTERILFQAQRYGMAPEQFIQQIQQ-AGQLGAVFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+ K + +++ + D V +LF N + E + ++ +SE+
Sbjct: 407 DVRRGKALAGVVEQATVTDTSGAAVDTAELFGNGEAETEEAASTDEAASDSTESEDQK 464
>gi|261364458|ref|ZP_05977341.1| trigger factor [Neisseria mucosa ATCC 25996]
gi|288567378|gb|EFC88938.1| trigger factor [Neisseria mucosa ATCC 25996]
Length = 436
Score = 236 bits (600), Expect = 8e-60, Method: Composition-based stats.
Identities = 98/448 (21%), Positives = 210/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D LK+ +++
Sbjct: 61 SAQNDAINEMVQRRFYDVAVAQELKVAGYPRFEGVEEQDD--------KESLKIAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E++ GD+V +D+
Sbjct: 113 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAQNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPED+ +D+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGQDVAGKSA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P V+ D A LG MR + + + E V ++ K ++
Sbjct: 233 VFTITLNNVSEPTLPEVDADFAKALGIADGDVAKMREEVKKNVGREVERRVNEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + + L + A+RRV
Sbjct: 293 NALLKAVELKAPVALVNEEAARLANEMKQDFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQGPTSLAVE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVTEKALSFDEVMGAQA 436
>gi|241663135|ref|YP_002981495.1| trigger factor [Ralstonia pickettii 12D]
gi|309781947|ref|ZP_07676678.1| trigger factor [Ralstonia sp. 5_7_47FAA]
gi|240865162|gb|ACS62823.1| trigger factor [Ralstonia pickettii 12D]
gi|308919291|gb|EFP64957.1| trigger factor [Ralstonia sp. 5_7_47FAA]
Length = 447
Score = 236 bits (600), Expect = 8e-60, Method: Composition-based stats.
Identities = 93/456 (20%), Positives = 202/456 (44%), Gaps = 24/456 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ L R++ + +P + R+ + + GFRPGKVP+ ++ YG+ +
Sbjct: 3 TIENLGKLDRKVTLAVPKAEVEQEKQSRLARLSKTVKMSGFRPGKVPMKMVEKQYGQQVE 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E + +I +++ + A +P + + ++++ P+
Sbjct: 63 FEVRYDKAARQFFDITNEQGVKVAGQPRFELKTEGV--------ADDQVAFDATFEVYPE 114
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------GDKV 173
+++ ++T+ E+ + EID+ + + K V + + E GD+V
Sbjct: 115 VKLGDLAGAELTRTKTEITDAEIDKTLDILRKQRVHYHPRGEAGEHGDGGAAVAQDGDRV 174
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
TVD+ ++D V + F++G + E + +GLK G+ K+ FPED+ K
Sbjct: 175 TVDFVGTIDGVEFAGGKAEGFSFVLGEGRMLPEFEQATLGLKQGESKKFPLAFPEDYHGK 234
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQ 291
D+AGK ++K+V VN A LG + MR + +++ +
Sbjct: 235 DVAGKTAEFTVTLKQVEWAHLPEVNEAFAQSLGIADGNLDKMRADIRENLEREVKRRTHA 294
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+K Q+++ + DVP+SLVE + +++ R ++ S + + +
Sbjct: 295 LLKDQVMEALLKVAELDVPKSLVEQDQERLVEMARRDLESRGMPNA---KNMPIPAEMFT 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+RRV G+VL + + N +E E++++ + + + K+++ + LAE
Sbjct: 352 QQAERRVKLGLVLAEVVKANGLEAKPEQIKAEIEEFAKSY-EDPKEVIRWYYGDQQRLAE 410
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ A + E+ V++ + ++ D+ V+F++L ++
Sbjct: 411 MEAYVLENNVVNFVCDKAKVTDKVVSFEELTATPAQ 446
>gi|307610565|emb|CBX00153.1| peptidyl-prolyl cis-trans isomerase [Legionella pneumophila 130b]
Length = 443
Score = 236 bits (600), Expect = 9e-60, Method: Composition-based stats.
Identities = 94/453 (20%), Positives = 208/453 (45%), Gaps = 14/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R++ V +P+ ++ + + R+ ++ K I GFRPGKVP + +KS +
Sbjct: 1 MQVSVETLEGLERKVTVSVPTEKVEEEVSSRLRNLARKVKIDGFRPGKVPFNVVKSRFSD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E E+++ + E L K + A P + E IE D K +++
Sbjct: 61 SVREEVAREMVQSTLYEALQKNELVPAGYPHVEPLE---------IEPGKDFKYTAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P EI + V EV +K++D + ++ + N + + GDKV +D+
Sbjct: 112 MPVFEIVELNQAPVELIRSEVTDKDVDNMIEKLREQNKEWHEVTHAVKKGDKVVIDFQGF 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D+ + S + + ++GS + + ++G K +I+ FPED+ KDLAGK+
Sbjct: 172 LDDKPFQGGSAEGYELVIGSGSMIPGFEDGIIGGKIDKPFDIKVSFPEDYGHKDLAGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+IK++ ++ A + + +++ + + + E V + ++
Sbjct: 232 TFKITIKKIMEGKLPALDEAFAEKFNIKEGGIESLKKDIRENMARELERRVNMMNREKLF 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + ++P +L++ E + + + + ++ + I + + + AKRRV
Sbjct: 292 DSLMSVNHVELPIALIDKEIEHLKHDMYHRLF--GHEHKDDEKIPDFPRELFEEQAKRRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ +K+ I +++ + + + + ++ +Q +AE+ A + E
Sbjct: 350 HLGLLFAEYVKKHEIVADNDKVNAMIDKFASAY-ESPDELRAWYQSSKEHMAEVEALVME 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
D V D I + ++ + + +D + + + +
Sbjct: 409 DMVADKIAEDAKLKYKNMDYDSVMNPKKGTEKK 441
>gi|52842087|ref|YP_095886.1| trigger factor [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|54297779|ref|YP_124148.1| trigger factor [Legionella pneumophila str. Paris]
gi|67461681|sp|Q5X450|TIG_LEGPA RecName: Full=Trigger factor; Short=TF
gi|67461692|sp|Q5ZUD8|TIG_LEGPH RecName: Full=Trigger factor; Short=TF
gi|52629198|gb|AAU27939.1| trigger factor TF (FKBP-type peptidyl prolyl cis-trans isomerase)
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|53751564|emb|CAH12982.1| peptidyl-prolyl cis-trans isomerase (trigger factor) [Legionella
pneumophila str. Paris]
Length = 443
Score = 236 bits (600), Expect = 9e-60, Method: Composition-based stats.
Identities = 95/453 (20%), Positives = 208/453 (45%), Gaps = 14/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R++ V +P+ ++ + + R+ ++ K I GFRPGKVP + +KS +
Sbjct: 1 MQVSVETLEGLERKVTVSVPTEKVEEEVSSRLRNLARKVKIDGFRPGKVPFNVVKSRFSD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E E+++ + E L K + A P + E IE D K +++
Sbjct: 61 SVREEVAREMVQSTLYEALQKNELVPAGYPHVEPLE---------IEPGKDFKYTAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P EI + V EV +K++D + ++ + N + + GDKV +D+
Sbjct: 112 MPVFEIVELNQAPVELIRSEVTDKDVDNMIEKLREQNKEWHEVTHAVKKGDKVVIDFQGF 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D+ + S + + ++GS + + +VG K +I+ FPED+ KDLAGK+
Sbjct: 172 LDDKPFQGGSAEGYELVIGSGSMIPGFEDGIVGGKIDKPFDIKVSFPEDYGHKDLAGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+IK++ ++ A + + +++ + + + E V + ++
Sbjct: 232 TFKITIKKIMEGKLPALDEAFAEKFNIKEGGIESLKKDIRENMARELERRVNMMNREKLF 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + ++P +L++ E + + + + ++ + I + + + AKRRV
Sbjct: 292 DSLMSVNHVELPIALIDKEIEHLKHDMYHRLF--GHEHKDDEKIPDFPRELFEEQAKRRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ +K+ I +++ + + + + ++ +Q +AE+ A + E
Sbjct: 350 HLGLLFAEYVKKHEIVADNDKVNAMIDKFASAY-ESPDELRAWYQSSKEHMAEVEALVME 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
D V D I + ++ + + +D + + + +
Sbjct: 409 DMVADKIAEDAKLKYKNMDYDSVMNPKKGTEKK 441
>gi|254440589|ref|ZP_05054083.1| trigger factor [Octadecabacter antarcticus 307]
gi|198256035|gb|EDY80349.1| trigger factor [Octadecabacter antarcticus 307]
Length = 456
Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats.
Identities = 118/453 (26%), Positives = 228/453 (50%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V E ++GLKR ++ I + L E++++ + + +KGFR GKVP++ +K +G
Sbjct: 14 MTVKETLNDGLKRGYEIKITAAELDAKVLEKLKEAQPEVEMKGFRKGKVPMAMMKKQFGP 73
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + E + + L +R AM+P + + + + D+ + +SY+
Sbjct: 74 KVLGEAMQESVDGAMNTHLETSGDRPAMQPEMKM-------ANDEWKEGDDVVVNVSYEA 126
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP + F ++++ + + + D+ + + +A+ F+ ++ +++ GD+V D+
Sbjct: 127 LPVVPEVDFTNIKLEKLVVKADDASVQEALTSLAETAKNFDDRKKGAKAKDGDQVIFDFL 186
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + + +GS E L+G+K G++K +E FP D++ + LAGK
Sbjct: 187 GKVDGEPFEGGAAEGHALELGSGQFIPGFEEGLIGVKAGEEKNVEVTFPADYNAEHLAGK 246
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I V P +++++A + G E + ++G + K+++ R KR +L
Sbjct: 247 VAVFECKILNVKEPKTSEIDDEMAKQFGAEDLAGLKGQITSKLEEEYSGAARAVTKRALL 306
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +F++P SLVE E I ++ E N + + D + E + LA RRV
Sbjct: 307 DELDKMVSFELPPSLVEAEAGQIAHQLWHE---DNPEVEGHDHPEVETTDEHTKLADRRV 363
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG+K I+V++ E A+ Q ++ ++ + QK P ++RAP+FE
Sbjct: 364 KLGLLLAEIGQKAEIQVSDAEFTQAVMNQARQYGDQARQFFEFVQKNPQMQQQIRAPLFE 423
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+DHI+++ + +++V D+L E
Sbjct: 424 DKVVDHIVEAASMKEKEVNKDELQKAVEALEEE 456
>gi|226360503|ref|YP_002778281.1| trigger factor [Rhodococcus opacus B4]
gi|254789016|sp|C1AVQ6|TIG_RHOOB RecName: Full=Trigger factor; Short=TF
gi|226238988|dbj|BAH49336.1| trigger factor [Rhodococcus opacus B4]
Length = 464
Score = 235 bits (599), Expect = 1e-59, Method: Composition-based stats.
Identities = 86/478 (17%), Positives = 202/478 (42%), Gaps = 23/478 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F++ + + + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFEELKPDFDKAYKALAQQIRLPGFRPGKAPAKLLEARVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + +++ + E ++ +A +P I I + IE L+ D
Sbjct: 61 GAVLEQVVNDALPSRYSEAVTSASVKAIGQPEIEITK---------IEDGELLEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + + +L VT D E+ ++ ++ Q+ + + E E GD +++D +
Sbjct: 112 VRPEITLPDYSELSVTVDPIEITDEAVEEQLLSLRQRFGTLTGVERAVEDGDFISIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + VGS L E +VG+K G+ KE D AGK+
Sbjct: 172 TVDGEAVPEATASGLSHEVGSGQLIEGLDEAVVGVKAGESKEFTSTLVAG----DHAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ V +++ A F++ ++ +++ + + +++ ++L
Sbjct: 228 AVVTVTVGTVKERELPAEDDEFAQLASEFDTLDELKADLRERVGRVRKVEQAGQIRDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHMLA 354
+ + +PE++V+ E + L + N+ + + EE + A
Sbjct: 288 ETLLETVEVPLPEAVVKAEVDAALHDAVHGLDHDEDALNKLLEEQGTSREEFDKDAKDSA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+R V T ++L I + +++ V ++E+ + Q R+ ++ + Q+ L + A
Sbjct: 348 ERSVKTQLLLDAIADASDVTVGQDELTERILFQAQRYGMAPEQFIQQIQQ-AGQLGAVFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+ K + +++ + D V +LF N + E ++ + E+
Sbjct: 407 DVRRGKALAGVVEQATVTDTSGASVDTAELFGNGEADTEEAASTDEVASDSAEGEDQK 464
>gi|296107453|ref|YP_003619153.1| trigger factor [Legionella pneumophila 2300/99 Alcoy]
gi|295649354|gb|ADG25201.1| trigger factor [Legionella pneumophila 2300/99 Alcoy]
Length = 443
Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 95/453 (20%), Positives = 208/453 (45%), Gaps = 14/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R++ V +P+ ++ + + R+ ++ K I GFRPGKVP + +KS +
Sbjct: 1 MQVSVETLEGLERKVTVSVPTEKVEEEVSSRLRNLARKVKIDGFRPGKVPFNVVKSRFSD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E E+++ + E L K + A P + E IE D K +++
Sbjct: 61 SVREEVAREMVQSTLYEALQKNELVPAGYPHVEPLE---------IEPGKDFKYTAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P EI + V EV +K++D + ++ + N + + GDKV +D+
Sbjct: 112 MPVFEIVELNQAPVELIQSEVTDKDVDNMIEKLREQNKEWHEVTHAVKKGDKVVIDFQGF 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D+ + S + + ++GS + + +VG K +I+ FPED+ KDLAGK+
Sbjct: 172 LDDKPFQGGSAEGYELVIGSGSMIPGFEDGIVGGKIDKPFDIKVSFPEDYGHKDLAGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+IK++ ++ A + + +++ + + + E V + ++
Sbjct: 232 TFKITIKKIMEGKLPALDEAFAEKFNIKEGGIESLKKDIRENMARELERRVNMMNREKLF 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + ++P +L++ E + + + + ++ + I + + + AKRRV
Sbjct: 292 DSLMSVNHVELPIALIDKEIEHLKHDMYHRLF--GHEHKDDEKIPDFPRELFEEQAKRRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ +K+ I +++ + + + + ++ +Q +AE+ A + E
Sbjct: 350 HLGLLFAEYVKKHEIVADNDKVNAMIDKFASAY-ESPDELRAWYQSSKEHMAEVEALVME 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
D V D I + ++ + + +D + + + +
Sbjct: 409 DMVADKIAEDAKLKYKNMDYDSVMNPKKGTEKK 441
>gi|187928951|ref|YP_001899438.1| trigger factor [Ralstonia pickettii 12J]
gi|187725841|gb|ACD27006.1| trigger factor [Ralstonia pickettii 12J]
Length = 447
Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 93/456 (20%), Positives = 202/456 (44%), Gaps = 24/456 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ L R++ + +P + R+ + + GFRPGKVP+ ++ YG+ +
Sbjct: 3 TIENLGKLDRKVTLAVPKAEVEQEKQSRLARLSKTVKMSGFRPGKVPMKMVEKQYGQQVE 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E + +I +++ + A +P + + ++++ P+
Sbjct: 63 FEVRYDKAARQFFDITNEQGVKVAGQPRFELKTEGV--------ADDQVAFDATFEVYPE 114
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------GDKV 173
+++ ++T+ E+ + EID+ + + K V + + E GD+V
Sbjct: 115 VKLGDLASAELTRTKTEITDAEIDKTLDILRKQRVHYHPRGEAGEHGDGGAAVAQDGDRV 174
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
TVD+ ++D V + F++G + E + +GLK G+ K+ FPED+ K
Sbjct: 175 TVDFVGTIDGVEFAGGKAEGFSFVLGEGRMLPEFEQATLGLKQGESKKFPLAFPEDYHGK 234
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQ 291
D+AGK ++K+V VN A LG + MR + +++ +
Sbjct: 235 DVAGKTAEFTVTLKQVEWAHLPEVNEAFAQSLGIADGNLDKMRADIRENLEREVKRRTHA 294
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+K Q+++ + DVP+SLVE + +++ R ++ S + + +
Sbjct: 295 LLKDQVMEALLKVAELDVPKSLVEQDQERLVEMARRDLESRGMPNA---KNMPIPAEMFT 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+RRV G+VL + + N +E E++++ + + + K+++ + LAE
Sbjct: 352 QQAERRVKLGLVLAEVVKANGLEAKPEQIKAEIEEFAKSY-EDPKEVIRWYYGDQQRLAE 410
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ A + E+ V++ + ++ D+ V+F++L ++
Sbjct: 411 MEAYVLENNVVNFVCDKAKVTDKAVSFEELTATPAQ 446
>gi|261380956|ref|ZP_05985529.1| trigger factor [Neisseria subflava NJ9703]
gi|284796215|gb|EFC51562.1| trigger factor [Neisseria subflava NJ9703]
Length = 436
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 209/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P +++ ++++ + +A + GFRPGK P I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSKINAETEKKLKQTQRRAKVDGFRPGKAPFKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ E+ ++ + A P E + D S K+ +++
Sbjct: 61 SAQNDVINELVQREFYEVAVAQELKVAGYPRFEGVEEQDDQES--------FKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F + E++ GD+V +D+
Sbjct: 113 FPEVTIGDLSAQEVEKVTATVGDAEVDQTVEILRKQRTRFNHVDREAQNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKSA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG E MR + + + E + ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDADFAKALGIEDGDVAKMREEVKKNVGREVERRIGEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAADLQVPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + E+N +E TE+++++ + + ++++D + P+ L + E
Sbjct: 350 ALGLILAKLVEENKLEPTEDQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQGPTSLAVE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLSKAKVTEKALSFDEVMGAQA 436
>gi|54294749|ref|YP_127164.1| trigger factor [Legionella pneumophila str. Lens]
gi|67461677|sp|Q5WVI9|TIG_LEGPL RecName: Full=Trigger factor; Short=TF
gi|53754581|emb|CAH16065.1| peptidyl-prolyl cis-trans isomerase (trigger factor) [Legionella
pneumophila str. Lens]
Length = 443
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 93/453 (20%), Positives = 208/453 (45%), Gaps = 14/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R++ V +P+ ++ + + R+ ++ K I GFRPGKVP + +KS +
Sbjct: 1 MQVSVETLEGLERKVTVSVPTEKVEEEVSSRLRNLARKVKIDGFRPGKVPFNVVKSRFSD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E E+++ + E L K + A P + E IE D K +++
Sbjct: 61 SVREEVAREMVQSTLYEALQKNELVPAGYPHVEPLE---------IEPGKDFKYTAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P E+ + V EV +K++D + ++ + N + + GDKV +D+
Sbjct: 112 MPVFEVVELNQAPVELIQSEVSDKDVDNMIEKLREQNKEWHEVTHAVKKGDKVVIDFQGF 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D+ + S + + ++GS + + ++G K +I+ FPED+ KDLAGK+
Sbjct: 172 LDDKPFQGGSAEGYELVIGSGSMIPGFEDGIIGGKIDKPLDIKVSFPEDYGHKDLAGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+IK++ ++ A + + +++ + + + E V + ++
Sbjct: 232 TFKITIKKIMEGKLPALDEAFAEKFNIKEGGIESLKKDIRENMARELERRVNMMNREKLF 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + ++P +L++ E + + + + ++ + I + + + AKRRV
Sbjct: 292 DSLMSVNHVELPIALIDKEIEHLKHDMYHRLF--GHEHKDDEKIPDFPRELFEEQAKRRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ +K+ I +++ + + + + ++ +Q +AE+ A + E
Sbjct: 350 HLGLLFAEYVKKHEIVADNDKVNAMIDKFASAY-ESPDELRAWYQSSKEHMAEVEALVME 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
D V D I + ++ + + +D + + + +
Sbjct: 409 DMVADKIAEDAKLKYKNMDYDSVMNPKKGTEKK 441
>gi|241758725|ref|ZP_04756838.1| trigger factor [Neisseria flavescens SK114]
gi|241320933|gb|EER57146.1| trigger factor [Neisseria flavescens SK114]
Length = 436
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 209/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P +++ ++++ + +A + GFRPGK P I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSKINAETEKKLKQTQRRAKVDGFRPGKAPFKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ E+ ++ + A P E + D S K+ +++
Sbjct: 61 SAQNDVINELVQREFYEVAVAQELKVAGYPRFEGIEEQDDQES--------FKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F + E++ GD+V +D+
Sbjct: 113 FPEVTIGDLSAQEVEKVTATVGDAEVDQTVEILRKQRTRFNHVDREAQNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKSA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG E MR + + + E + ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDADFAKALGIEDGDVAKMREEVKKNVGREVERRIGEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAADLQVPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + E+N +E TE+++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVEENKLEPTEDQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQGPTSLAVE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLSKAKVTEKALSFDEVMGAQA 436
>gi|255263209|ref|ZP_05342551.1| trigger factor [Thalassiobium sp. R2A62]
gi|255105544|gb|EET48218.1| trigger factor [Thalassiobium sp. R2A62]
Length = 444
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 125/454 (27%), Positives = 238/454 (52%), Gaps = 12/454 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR +++ + L + N + + + + +KGFR GKVP++ +K YG+
Sbjct: 1 MQVTETLNEGLKRGYSIVVTAAELEEKVNAELAEAQPEIEMKGFRKGKVPMALLKKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + + I E + + ++ AM+P + + + + D+ + +SY++
Sbjct: 61 RMLGEAMQKAIDEAMAKHFEDSGDKPAMQPDVKMT-------NEDWKEGDDVNVDMSYEM 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP I F +++ + + D+ + + +A++ FE ++ +++ GD+V +D+
Sbjct: 114 LPPIPEVDFTKMKLERMSVKADDASVAEALENLAESAQNFEDRKKGSKAKDGDQVVIDFL 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + ++ ++GS + LVG+K GD+K++E FP ++ + LAGK
Sbjct: 174 GKVDGEAFEGGAAEDYPLVLGSNSFIPGFEDDLVGVKEGDEKDVEVSFPAEYQAEHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
IK V +P +N++LA + G E A++G +++++ + R KR +L
Sbjct: 234 AAVFECKIKAVKAPAKAELNDELAKQFGAEDLDALKGQIAERLEAEYKGAARAVAKRGLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +F++P SLVE E I ++ E N + + D + ++ LA+RRV
Sbjct: 294 DALDKEVSFELPPSLVEAEAGQIAHQLWHE---DNPEVEGHDHPEITPTDEHNELAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG+K +EVT+ EM A+ Q ++PG E++ + Q+ ++RAPIFE
Sbjct: 351 KLGLLLAEIGQKAEVEVTDAEMTQAIMNQARQYPGQERQFFEFVQQNQQMQQQMRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
DKV+D I +++++V+ D L +
Sbjct: 411 DKVVDMIFDQADLIEKEVSKDDLQKAVEALEADD 444
>gi|74317696|ref|YP_315436.1| trigger factor [Thiobacillus denitrificans ATCC 25259]
gi|119371026|sp|Q3SI97|TIG_THIDA RecName: Full=Trigger factor; Short=TF
gi|74057191|gb|AAZ97631.1| trigger factor [Thiobacillus denitrificans ATCC 25259]
Length = 432
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 103/447 (23%), Positives = 200/447 (44%), Gaps = 17/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + EGL R LD+ +P ++L R++ + + GFRPGK PLS + +G
Sbjct: 1 MQGNLEVLEGLARRLDISVPVDQLETEVQSRLKRLARSVKMHGFRPGKAPLSAVARQHGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E +K E + R A P ++ S+++
Sbjct: 61 GVRQEVLGETLKTRFGEAVQTHQLRIAGYPRFEPK--------ADASAAAEMTFSASFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+++I + D + + + E+ + ++ + + + K F + GD V DY +
Sbjct: 113 YPEVKIDALDSATLNRPVVELGDADVAKTLEVLQKQRRTFATAARAAAEGDLVKFDYQGT 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E ++ ++G L + + LVGLK GD K + FP +++ ++LA K
Sbjct: 173 VDGAPFEGGRGEDFAAVIGEGRLLKDFEQALVGLKAGDSKGFDLTFPAEYAARELADKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+KEV +P+ V+ + A LG E ++ +++ + V+ K+K Q +
Sbjct: 233 HFEVQVKEVQAPVLPPVDAEFAEALGVEDGDVEKLKAEVKSNLEREVKRRVQAKLKEQAM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + K T D+P SLVE E + + + +M S +S + + A+RRV
Sbjct: 293 ELLLQKSTLDLPRSLVEMEMDRLRRMTEADMQSRGVQSMKLS------ADMFTGQAERRV 346
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L I + N + E+++S + Q + +++ + + P + E+ + E
Sbjct: 347 RLGLILAEIVQANKLAAQPEQIRSLIQDQAQSY-EEPDQVVQWYYQSPERMQEIESLALE 405
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
+ V+ + +VD +FD+L +
Sbjct: 406 ENVVAWVADQATVVDVATSFDELMGRA 432
>gi|88810606|ref|ZP_01125863.1| trigger factor [Nitrococcus mobilis Nb-231]
gi|88792236|gb|EAR23346.1| trigger factor [Nitrococcus mobilis Nb-231]
Length = 475
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 114/464 (24%), Positives = 220/464 (47%), Gaps = 17/464 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R L + + R+ R+ ++S+ + GFRPGKVP ++ YG
Sbjct: 23 MQVSVETTQGLERRLRFQVSNERIDKEVKSRLTSLKSQVRLDGFRPGKVPYKVVEKRYGA 82
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E+++ E + + R A P DI DL+ ++++
Sbjct: 83 EVRDEVVTEVLRASYVEAMEQEGLRPAGAP---------DIQPLPTAEGEDLEYTATFEV 133
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+IE+ D+L+V + E+ + ++D+ + ++ + NV + S D+VT+D+T
Sbjct: 134 LPEIEVKGLDELEVERPAVEIADADLDKVLEQLRRQNVDYVEVGRPSADDDRVTIDFTGQ 193
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + K+V +GS + E + L GL+ D K+IE FPE + LAGK
Sbjct: 194 IDGAGFKGDRGKDVGVRIGSGQMPKEFEQALKGLRAEDVKDIEYHFPERSPDQQLAGKTA 253
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ V P ++++ A RLG E +R + ++ + VR ++K+Q+L
Sbjct: 254 IFHVTVNRVEEPQLPALDDEFAKRLGIEEGGFEQVRAQIRESLEFERDRAVRARLKQQVL 313
Query: 299 DYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D + + ++P+SLV E + ++ M A Q + A+RR
Sbjct: 314 DKLLAHHDALELPQSLVNAELKVLRERALRRMQQAGSDEQ----TPDIPDSALEQGARRR 369
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V +++ I N+I + E +Q AL + +++L ++ ++ + L +
Sbjct: 370 VTLYLLINEIVRSNDIRLDEGRLQEALNELA-SNHSRPQELLQYYMEHRQMMEGLELAVI 428
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVE 461
ED+ +D IL+ V+ VD+ ++FD+L + + + E
Sbjct: 429 EDQAVDWILERVKTVDQVMSFDELMGIKGGTEDQDSESEDEGNE 472
>gi|260427751|ref|ZP_05781730.1| trigger factor [Citreicella sp. SE45]
gi|260422243|gb|EEX15494.1| trigger factor [Citreicella sp. SE45]
Length = 443
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 124/453 (27%), Positives = 238/453 (52%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR ++I+ + L N ++++ + + +KGFR GKVP+ +K +G+
Sbjct: 1 MQVTETLNEGLKRAYELILTAEELDAKVNAKLKEAQPEIEMKGFRKGKVPMPLLKKQFGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E++ E I + + + +R A++P + + + + D+ + +SY+
Sbjct: 61 RLLGESMQEEIDAAMSKHFEESGDRPALQPQVKMT-------NEDWKEGDDVNVEMSYEK 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP + +++ + + + D+ +D +A +AK F+ ++ +++ GD+V +D+
Sbjct: 114 LPDVPEVDLSGVEIEKLVVKADDASVDEALASLAKTAQDFKDRKKGTKAKDGDQVVIDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + + ++ ++GS E LVG+K ++K +E FPE++ + LAGK
Sbjct: 174 GKVDGEPFDGGAAEDYPLVLGSDSFIPGFEEQLVGVKAEEEKAVEVTFPEEYGAEHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V P+ V+++LA + G E +++G ++++ RQ +KR +L
Sbjct: 234 AAVFDVTVKSVKEPVEAEVDDELAKKFGAEDLESLKGQIRERLEAEFAGAARQVMKRDLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +F++P +LV+ E I ++ E + E + + LA+RRV
Sbjct: 294 DKLDALVSFELPPTLVDAEAKQIAHQLYHEEHPEDHGHD---HGAIEPTEEHSKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L IG+K +EVT+ EM A+ Q ++PG E+ D ++ +LRAPIFE
Sbjct: 351 RLGLLLAEIGQKAEVEVTDAEMTQAIMSQARQYPGQERAFFDFVRQNAQMQQQLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKVIDHI ++ +++V+ D+L E
Sbjct: 411 DKVIDHIAAQAKVSEKEVSKDELQTAVEALDEE 443
>gi|325266756|ref|ZP_08133429.1| trigger factor [Kingella denitrificans ATCC 33394]
gi|324981758|gb|EGC17397.1| trigger factor [Kingella denitrificans ATCC 33394]
Length = 432
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 101/441 (22%), Positives = 220/441 (49%), Gaps = 14/441 (3%)
Query: 8 SEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETI 67
+E L+R++ V +P + +++++ + + I GFRPGK PL + S+YG SI ++ I
Sbjct: 4 TESLERKVTVSLPWLDINAETDKQLKQAQRRVRIDGFRPGKAPLKMVASMYGASIQNDAI 63
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
+++ + +I +++ R A I E + DL+L Y+ P I+++
Sbjct: 64 NDLAQAAFNKIAQEQNLRIAAVTGIEPVENQD-------TSGADLQLTFVYETYPDIQLA 116
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
F L++ + + EV E E+D + + K ++ E E++ GD+V +D+ +D V +
Sbjct: 117 DFSALEIEKVVSEVGEAEVDSTIEILRKQRTMYKRVEREAKEGDRVIIDFEGKIDGVPFD 176
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
S KN F++G + E + ++G+K + K++E FPED+ KD+AGK ++
Sbjct: 177 GGSAKNYPFVLGQGQMLPEFEKGILGMKEDESKDVEVSFPEDYHGKDVAGKTAVFTITVH 236
Query: 248 EVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
V V+ A LG MR + + + + + + ++ + +
Sbjct: 237 NVAEATLPEVDEVFARALGIADGDVAKMRAEVQKNVAREVKRRLNAQNTDAVMKALRAAH 296
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLG 365
TF +P++ V++E + + ++++ + + ++ E + A+ RV G++L
Sbjct: 297 TFPLPQAFVKDEAHRLSEEMKQNLVKQGLDANDLQLPAEMFNE----RAQERVALGLLLP 352
Query: 366 TIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHI 425
I EK+N++ TEE++++ + + + ++++D + + LA + E V+D +
Sbjct: 353 EIVEKHNLKATEEQIKNIITEFADSY-EDPQEVIDWYFADSSRLAGVSNMAVESNVVDFV 411
Query: 426 LKSVQIVDRKVTFDQLFDNSS 446
L ++ ++K++FD++ +
Sbjct: 412 LGKAKVTEKKLSFDEVMGAGA 432
>gi|146329491|ref|YP_001209155.1| trigger factor [Dichelobacter nodosus VCS1703A]
gi|166229043|sp|A5EWF6|TIG_DICNV RecName: Full=Trigger factor; Short=TF
gi|146232961|gb|ABQ13939.1| trigger factor [Dichelobacter nodosus VCS1703A]
Length = 439
Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats.
Identities = 94/449 (20%), Positives = 205/449 (45%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + EGL +L V IP+ + + +R++ +R + I GFRPGKVP IK YG
Sbjct: 1 MESSIEKLEGLAHKLTVEIPAGDIDQAVTQRLKSLRPRLRIDGFRPGKVPPHIIKQRYGI 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S + + + I EI+SK D P I + G + LK +++
Sbjct: 61 SARQDVLGDEIDRSYREIISKSDYAPVAPPQIELISG--------FKEGEALKFEAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P++ ++ D L +T ++ +K++D + + + F + + GD++T+D+ +
Sbjct: 113 MPEVVVNGLDALDITLPDAQLSDKDVDEMIDTLRRQRANFVESDKIAGNGDRLTLDFIGT 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ E ++ F +GS + + L G+K G++K + FPED+ ++LAGK
Sbjct: 173 LNGEPFEGGKGEDFCFNLGSGQMLPDFERGLQGMKAGEEKSFDVQFPEDYPSENLAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + V+ G + R + + E R+ + ++
Sbjct: 233 QFAATLKKVEAMILPEVDESFIKAFGIASGDAADFRRAIRDNMSRELEKAKRRIKRERLF 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D I K + + ++++ E + ++ + + + Q + AKRR+
Sbjct: 293 DAILEKNADQIVP---NASLHQEMERMAKEF-NLEKQIPDTEKRHQLMHQLFEKNAKRRI 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + ++ IE+ + +Q L + +++ +Q + +L A I E
Sbjct: 349 QLGLLLGKLFDERQIEIDQSRVQERLESIAATY-EDPEEVKKWYQNDEKSRRDLEAVILE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+++ID + + ++ +F ++ +++
Sbjct: 408 EQLIDQLYEKAKVSYETRSFQEIMAVNAQ 436
>gi|260433330|ref|ZP_05787301.1| trigger factor [Silicibacter lacuscaerulensis ITI-1157]
gi|260417158|gb|EEX10417.1| trigger factor [Silicibacter lacuscaerulensis ITI-1157]
Length = 443
Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats.
Identities = 122/453 (26%), Positives = 242/453 (53%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR ++++ + L + NE++ + + + +KGFR GKVP++ +K +G+
Sbjct: 1 MQVTETLNEGLKRGYNIVVTAAELDEKVNEKLIEAQPEIEMKGFRKGKVPMALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + E I + + + +R A++P + + + + D+ + ++Y+
Sbjct: 61 RLLGEAMQETIDGAMNKHFEESGDRPALQPQVKMT-------NEDWKEGDDVHVEMTYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP+I +++ + + + D+ ++ + +A+ F+ + +++ GD+V +D+
Sbjct: 114 LPEIPEVDLKSIKLEKLVVKADDAAVEEALKNLAETAQDFKARRKGSKAKEGDQVVIDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E S ++ ++GS + LVG+K + K++ FPE++ + LAGK
Sbjct: 174 GKIDGEPFEGGSAEDYPLVLGSNSFIPGFEDQLVGVKAEEVKDVTVSFPEEYGAEHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++KEV P+ +N++LA + G E A++ +++++ R +KR +L
Sbjct: 234 EAVFTCTVKEVKEPVAAEINDELAQKFGAEDLEALKKQIAERLEAEYAGASRAVMKRALL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +F++P SLVE E I ++ E N Q D + E + + LA+RRV
Sbjct: 294 DELDKMVSFELPPSLVEAEAKQIAHQLWHE---ENPDVQGHDHEEIEPTEEHTKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K +EVT+ EM A+ Q ++PG E++ + Q+ +LRAPIFE
Sbjct: 351 RLGLLLAELGQKAEVEVTDAEMTQAIMNQARQYPGQERQFFEFVQQNAQMQQQLRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKVID++++ ++ +++V+ D L E
Sbjct: 411 DKVIDYVVELAEVTEKEVSKDDLQKAVEALEEE 443
>gi|254670504|emb|CBA06252.1| trigger factor [Neisseria meningitidis alpha153]
Length = 436
Score = 234 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 207/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 61 SAQNDVINELVQRRFYDVTVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 113 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKSA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V++D A LG MR + + + E V ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDSDFAKALGIADGDVAKMREEVKKNVSREVERRVNEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVNEKALSFDEVMGAQA 436
>gi|316984113|gb|EFV63091.1| trigger factor [Neisseria meningitidis H44/76]
gi|325205914|gb|ADZ01367.1| trigger factor [Neisseria meningitidis M04-240196]
Length = 436
Score = 234 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 207/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 61 SAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 113 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G++ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYADPSRLQAPTSLAVE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVNEKALSFDEVMGAQA 436
>gi|325134446|gb|EGC57091.1| trigger factor [Neisseria meningitidis M13399]
Length = 436
Score = 234 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 98/448 (21%), Positives = 208/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D LK+ +++
Sbjct: 61 SAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDD--------KESLKIAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E++ GD+V +D+
Sbjct: 113 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAQNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVNEKALSFDEVMGAQA 436
>gi|238023190|ref|ZP_04603616.1| hypothetical protein GCWU000324_03116 [Kingella oralis ATCC 51147]
gi|237865573|gb|EEP66713.1| hypothetical protein GCWU000324_03116 [Kingella oralis ATCC 51147]
Length = 435
Score = 234 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 96/448 (21%), Positives = 218/448 (48%), Gaps = 15/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E L+R++ V + + ++ ++ ++ + + I GFRPGK PL + +YG
Sbjct: 1 MSAAVETLEKLERKVIVSLSWLDINEATDKELKKAQRRVKIDGFRPGKAPLKMVAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++ ++++ ++ ++ +++ R A I EGE E LK+ +Y+
Sbjct: 61 GIQNDVLNDLAQQAFNKVAQEQNLRIAAVTKIEPVEGE--------ESADALKVAFTYET 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I+I L + + EV +KE+D + + K + E ++ GD+V +D+
Sbjct: 113 FPEIKIGDLSALNIEKVSAEVGDKEVDDTVEILRKQRTRYNRVERAAQNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D S KN F++G+ ++ E ++GLK G+ K++E FPED+ K++AGK
Sbjct: 173 IDGEPFAGGSSKNYPFLLGNGEMLPEFEAGVLGLKEGESKDVEVNFPEDYHGKEVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P+ V+ D A LG MR + + + + V + ++
Sbjct: 233 VFTITVHNVAEPMLPEVDADFAKALGIADGDVAKMREEIKKNVAREVKRRVDARNTDAVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++FD+P++ V++E + +++ + + N D + + A++RV
Sbjct: 293 EALRGAHSFDLPQAFVKDEAQRLADEMKQNFAQQGLDAANFDLPADMFTE----RAEQRV 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + E+ ++ T+E++++ + + ++++D + + LA E
Sbjct: 349 ALGLLLPALVEEFKLQATDEQVKAIIADVADSY-EDPQEVMDWYFADRSRLAGPTNLAVE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D++L + ++ ++F+++ ++
Sbjct: 408 ANVVDYVLGKANVTEKALSFEEVMGANA 435
>gi|29654071|ref|NP_819763.1| trigger factor [Coxiella burnetii RSA 493]
gi|41018201|sp|Q83DJ3|TIG_COXBU RecName: Full=Trigger factor; Short=TF
gi|29541337|gb|AAO90277.1| trigger factor, ppiase [Coxiella burnetii RSA 493]
Length = 442
Score = 234 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 98/446 (21%), Positives = 218/446 (48%), Gaps = 13/446 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ GLK+ L + +P+ + ++ R+ + A I FRPGK + ++ LYGK+IL
Sbjct: 8 SIEKLGGLKQRLTITVPAEEVDKAYKSRLLKVARTAKIPKFRPGKASPAVVEKLYGKAIL 67
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E E+I+ + E + + R A P I +++ I K +++++ P+
Sbjct: 68 QEVGSELIQSSLREAVEEHQLRVAGAPDIKMDK---------ILRGEPFKYVVNFEVYPE 118
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
I + S + + E+ E+++D+ + + K ++ + ++ D+V +D+ ++D
Sbjct: 119 ITLESLAGETIERTQVEITEEDLDKMLEALRKQYAEWKEMDRPAKADDRVIIDFEGTLDG 178
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E S K+ Q +GS + + E + G+K G+ K ++ FP D+ +DLAGK N
Sbjct: 179 KPFERGSAKDFQLELGSKRMIAGFEEGIEGMKPGESKALDITFPADYPSEDLAGKAAVFN 238
Query: 244 FSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++++V +P V++ A RLG + A+R +++ + K+K +LD +
Sbjct: 239 ITLQKVMAPELPVLDEQFAERLGIKEGGLEALRQKVRTNMEKEVHHHMENKLKMAVLDKL 298
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ +VPESL+E E + + Q R +++ K + E Y A +RV G
Sbjct: 299 IERNPIEVPESLIEAEIDHLQQMTRQQVAMQTHKP-DEAKKMELPRDPYREQATKRVKLG 357
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++L + +++ I+ E++++ + + + +K++ + L+E+ + + ED+
Sbjct: 358 LLLAEVVKQHKIKADPEQLRARVEEVAASY-QDPEKVISWYYTNKQMLSEIESVVLEDQA 416
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +++ D+ + +++ +
Sbjct: 417 VAQLMSELEVKDQAIPYEEAVKQIQQ 442
>gi|309379243|emb|CBX22200.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 436
Score = 234 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 96/448 (21%), Positives = 209/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 61 SAQNDVINELVQRRFYDVAVAQELKVAGYPRFEGVEEQDD--------KESFKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 113 FPEVVIGDLSAQEVEKVTASVGDAEVDKTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E + G+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVAGMKAGESKDVTVNFPEDYHGKDVAGKSA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P+ V+ D A LG MR + + + E V+++ K ++
Sbjct: 233 VFAITLNNVSEPVLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVKEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAVELKVPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E E+++++ + + ++++D + + P+ L + E
Sbjct: 350 SLGLILAKLVDENKLEPNEDQIKAVVANFAESY-EDPQEVIDWYYEEPSRLQGPTSLAVE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVSEKALSFDEVMGAQA 436
>gi|163746690|ref|ZP_02154047.1| trigger factor [Oceanibulbus indolifex HEL-45]
gi|161379804|gb|EDQ04216.1| trigger factor [Oceanibulbus indolifex HEL-45]
Length = 443
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 128/453 (28%), Positives = 248/453 (54%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR ++ + + L +E++++ + + +KGFR GKVP++ +K +G+
Sbjct: 1 MQVNETLNEGLKRGYNITVTAAELEAKVSEKLKEAQPEVEMKGFRKGKVPMALLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I+ E + E I + E +R AM+P + + + + D+++ ++Y+
Sbjct: 61 KIMGEAMQESIDGAMAEHFETSGDRPAMQPDVKMT-------NEDWKEGDDVEVSMAYEK 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP+I +++ + + + D+ +D +A +A+ F+ ++ +++ GD+V +D+
Sbjct: 114 LPEIPEVDLSKIELEKMVVKADDAAVDEALASLAETAQDFKARKKGSKAQDGDQVVIDFK 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + ++ ++GS E LVG+K G++K + FPE++ + LAGK
Sbjct: 174 GSVDGEEFEGGAAEDYPLVLGSNSFIPGFEEQLVGVKEGEEKSVVVNFPEEYQAEHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++KEV P+ VN+++A + G E A++G +++++ R +KR +L
Sbjct: 234 EATFACTVKEVKEPVAAEVNDEMAKKFGAEDLEALKGQIAERLEAEYAGASRAVMKRNLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +FD+P SLV+ E I ++ E N Q D + E + LA+RRV
Sbjct: 294 DALDKEVSFDLPPSLVDAEAKQIAHQLWHE---ENPDVQGHDHPEVEPTDEHKTLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G+K I+VT+ EM A+ Q ++PG E++ + Q+ ++RAPIFE
Sbjct: 351 RLGLLLAELGQKAEIQVTDAEMTQAIMNQARQYPGQERQFFEFVQQNQQMQQQMRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
DKV+DH+++ ++ +++++ D+L E E
Sbjct: 411 DKVVDHVVEQAKVTEKEISKDELQKAVEELEDE 443
>gi|15677179|ref|NP_274332.1| trigger factor [Neisseria meningitidis MC58]
gi|12230728|sp|Q9JZ37|TIG_NEIMB RecName: Full=Trigger factor; Short=TF
gi|7226554|gb|AAF41688.1| trigger factor [Neisseria meningitidis MC58]
gi|325140463|gb|EGC62984.1| trigger factor [Neisseria meningitidis CU385]
gi|325200062|gb|ADY95517.1| trigger factor [Neisseria meningitidis H44/76]
Length = 437
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 207/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 62 SAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G++ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 234 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 294 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYADPSRLQAPTSLAVE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVNEKALSFDEVMGAQA 437
>gi|313668451|ref|YP_004048735.1| trigger factor [Neisseria lactamica ST-640]
gi|313005913|emb|CBN87369.1| trigger factor [Neisseria lactamica 020-06]
Length = 437
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 96/448 (21%), Positives = 209/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 62 SAQNDVINELVQRRFYDVAVAQELKVAGYPRFEGVEEQDD--------KESFKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDKTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E + G+K G+ K++ FPED+ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVAGMKAGEDKDVTVNFPEDYHGKDVAGKSA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P+ V+ D A LG MR + + + E V+++ K ++
Sbjct: 234 VFAITLNNVSEPVLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVKEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV E + +++ + + L + A+RRV
Sbjct: 294 NALLKAVELKVPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E E+++++ + + ++++D + + P+ L + E
Sbjct: 351 SLGLILAKLVDENKLEPNEDQIKAVVANFAESY-EDPQEVIDWYYEEPSRLQGPTSLAVE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVSEKALSFDEVMGAQA 437
>gi|17546429|ref|NP_519831.1| trigger factor [Ralstonia solanacearum GMI1000]
gi|21264069|sp|Q8XYP8|TIG_RALSO RecName: Full=Trigger factor; Short=TF
gi|17428727|emb|CAD15412.1| probable peptidyl-prolyl cis/trans isomerase (trigger factor) (tf)
protein [Ralstonia solanacearum GMI1000]
Length = 449
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 90/453 (19%), Positives = 198/453 (43%), Gaps = 24/453 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ + +P + R+ + + GFRPGKVP+ ++ YG+
Sbjct: 1 MSTVIENLGKLDRKVTLAVPKAEVEQEKQSRLARLSKTVKMSGFRPGKVPMKMVEKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + +I +++ + A +P + ++++
Sbjct: 61 QVEMEVRFDKAARQFFDITNEQGVKVAGQPRFELKSEGV--------ADDQFAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------G 170
P+++I ++T+ E+ + EID+ + + K V + + + G
Sbjct: 113 YPEVKIGDLAGAELTRTKTEITDAEIDKTIDILRKQRVHYHPRGEAGDHGDGGEAVAQNG 172
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
D+VTVD+ ++D V + F++G + E + +GLK G+ K FP D+
Sbjct: 173 DRVTVDFVGTIDGVEFAGGKAEGFGFVLGEGRMLPEFEQATLGLKQGESKVFPLAFPADY 232
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFL 288
KD+AGK ++K+V +N A LG MR + +++ +
Sbjct: 233 HGKDVAGKTAEFTVTLKQVEWAHLPEINGAFAQSLGIADGSLDKMRADIRENLEREVKRR 292
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
+K Q++D + DVP+SL+E + +++ R ++ + + +
Sbjct: 293 THALLKDQVMDALLKVAELDVPKSLIEQDQERLVEMARRDLEARGMPN---VKNMPIPAE 349
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 MFAQQAERRVKLGLVLAEVVKVNALEAKPEQIKAEIEEFAKSY-EDPKEVIRWYYGDQQR 408
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQL 441
LAE+ A + E+ V++ + ++ D+ ++F++L
Sbjct: 409 LAEMEAYVLENNVVNFVCDKAKVADKAMSFEEL 441
>gi|299066730|emb|CBJ37924.1| peptidyl-prolyl cis/trans isomerase (trigger factor), molecular
chaperone involved in cell division [Ralstonia
solanacearum CMR15]
Length = 449
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 89/453 (19%), Positives = 198/453 (43%), Gaps = 24/453 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ + +P + R+ + + GFRPGKVP+ ++ YG+
Sbjct: 1 MSTVIENLGKLDRKVTLAVPKAEVEQEKQSRLVRLSKTVKMSGFRPGKVPMKMVEKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + +I +++ + A +P + ++++
Sbjct: 61 QVEMEVRFDKAARQFFDITNEQGVKVAGQPRFELKSEGV--------ADDQFAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------G 170
P++++ ++T+ E+ + EID+ + + K V + + + G
Sbjct: 113 YPEVKLGDLAGAELTRTKTEITDAEIDKTIDILRKQRVHYHPRGEAGDHGDGGEAIAQNG 172
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
D+VTVD+ ++D V + F++G + E + +GLK G+ K FP D+
Sbjct: 173 DRVTVDFVGTIDGVEFAGGKAEGFGFVLGEGRMLPEFEQATLGLKQGESKVFPLAFPADY 232
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFL 288
KD+AGK ++K+V +N A LG MR + +++ +
Sbjct: 233 HGKDVAGKTAEFTVTLKQVEWAHLPEINEAFAQSLGIADGSLDKMRADIRENLEREVKRR 292
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
+K Q++D + DVP+SL+E + +++ R ++ + + +
Sbjct: 293 THALLKDQVMDALLKVAELDVPKSLIEQDQERLVEMARRDLEARGMPN---VKNMPIPAE 349
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ A+RRV G+VL + + N +E E++++ + + + K+++ +
Sbjct: 350 MFTQQAERRVKLGLVLAEVVKANALEAKPEQIKAEIEEFAKSY-EDPKEVIRWYYGDQQR 408
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQL 441
LAE+ A + E+ V++ + ++ D+ ++F++L
Sbjct: 409 LAEMEAYVLENNVVNFVCDKAKVADKAMSFEEL 441
>gi|255067668|ref|ZP_05319523.1| trigger factor [Neisseria sicca ATCC 29256]
gi|255048142|gb|EET43606.1| trigger factor [Neisseria sicca ATCC 29256]
Length = 436
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 100/448 (22%), Positives = 209/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVMLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D LK+ +++
Sbjct: 61 SAQNDVINEMVQRRFYDVAVAQELKVAGYPRFEGVEEQDD--------KESLKIAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E++ GD+V +D+
Sbjct: 113 FPEVVIGDLSVQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAQNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKSA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P V+ D A LG MR + + + E V ++ K ++
Sbjct: 233 VFTITLNNVSEPTLPEVDADFAKALGIADGDVAKMREEVKKNVGREVERRVNEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + E+N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVEENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQGPTSLAVE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVTEKALSFDEVMGAQA 436
>gi|262380153|ref|ZP_06073308.1| trigger factor protein [Acinetobacter radioresistens SH164]
gi|262298347|gb|EEY86261.1| trigger factor protein [Acinetobacter radioresistens SH164]
Length = 443
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 93/449 (20%), Positives = 212/449 (47%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ I GFR GKVP++ ++ YG
Sbjct: 1 MQVTSEAVSGVARRLNVSVPTSRINEQFEARLKRTAKTVKINGFRQGKVPVNVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +++II++ V E + + A P+I E + D L + ++
Sbjct: 61 GIYQEVVNDIIRDTVFEAIQQEKINAVGMPNIDKVENKDDA----------LVYEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + D L V + + +K++D+ + + K + + ++ +VT D+ +
Sbjct: 111 YPEVEVKALDTLTVERKTSVIQDKDVDQMIENLQKQRQTWVETKGMAKKDMQVTFDFEGT 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S + + ++GS + + ++G+K G++K I+ FPED+ ++LAGK
Sbjct: 171 IDGEKFEGGSATDFKLVLGSGRMIPGFEDGIIGMKKGEEKVIDVTFPEDYQAENLAGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K+V ++ + G E ++ + +++ +R +VK+
Sbjct: 231 QFKITVKQVEKAKLPELDAEFLQTFGVSEEEGIDKLKADVRKNMEREVRNGLRNQVKQAA 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + +VP ++V E + Q++ + + + + + A++
Sbjct: 291 FDALVEANEVEVPSAMVAQEIDRQRQQMIQQFTQQFGGANAQTFDKSMLPDELFKEQAEK 350
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + +EV +++ + + +++++F+ A++ A +
Sbjct: 351 SVKLGVLVSKVLADAKLEVDPARVEAYIEDMASSY-EDPTEVIEYFKNDKQQRAQIEAVV 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+D+IL + Q+ D +V+++ L
Sbjct: 410 LEDQVVDYILAAAQVSDTEVSYEDLLKEQ 438
>gi|161870185|ref|YP_001599355.1| trigger factor [Neisseria meningitidis 053442]
gi|254789014|sp|A9LZP0|TIG_NEIM0 RecName: Full=Trigger factor; Short=TF
gi|161595738|gb|ABX73398.1| trigger factor [Neisseria meningitidis 053442]
Length = 436
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 207/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 61 SAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 113 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G++ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYADPSRLQAPTSLAVE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVNEKALSFDEVMGAQA 436
>gi|148652119|ref|YP_001279212.1| trigger factor [Psychrobacter sp. PRwf-1]
gi|172048459|sp|A5WC71|TIG_PSYWF RecName: Full=Trigger factor; Short=TF
gi|148571203|gb|ABQ93262.1| trigger factor [Psychrobacter sp. PRwf-1]
Length = 445
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 101/448 (22%), Positives = 220/448 (49%), Gaps = 13/448 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
QV + +L V +P ++ + RI ++ A I GFR GKVP+SHI++ YG
Sbjct: 6 QVTTSKVNDNQTQLTVKVPVEQIQNKVEGRIRNVAKTAKIDGFRKGKVPVSHIRAQYGAG 65
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I E I+++I++ V E + D RA P+I + E + L + + +I
Sbjct: 66 IQQEVINDVIRDTVFEAIKAEDVRAVGMPNIDDVKLEDEF----------LVYQATVEIF 115
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P+I++ D++V + + ++++D + + K F KE ++ GD+VT D+ S+
Sbjct: 116 PEIKVEGMSDIEVERHTATITDEDVDTMIENLRKQRQEFAEKEGAADEGDQVTFDFEGSI 175
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D E S ++ + ++GS + + + GL G++K I+ FPED+ ++LAGK+ +
Sbjct: 176 DGEKFEGGSAEDFKLVLGSGQMIPGFEDGIKGLAAGEEKTIDVTFPEDYQAENLAGKEAQ 235
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++K+V +N++ G + ++ + + + + R +VK+ D
Sbjct: 236 FKINVKKVEEAKLPEINDEFLELFGVKEGGVEQLKTDVRKNMTREIKNAARNQVKQAAFD 295
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ K FDVP ++V+ E + + + + N D + + A R
Sbjct: 296 ALLEKNEFDVPSAMVDQEVDRQRNLMMQRFAQQFGGNANSIDKDMLPRELFEEQAIRAAR 355
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G+++ + E+N+++V +E +++ + + + +++++++ A + + + ED
Sbjct: 356 LGVLVSRVIEENDLKVDQERVETFIKETAENY-EDPQEVIEYYTNDAQQRANIESVVLED 414
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+V+D +L+ ++ D++V + +L + +
Sbjct: 415 QVVDFLLEQGKVTDKEVGYQELLASQQQ 442
>gi|121611284|ref|YP_999091.1| trigger factor [Verminephrobacter eiseniae EF01-2]
gi|166229951|sp|A1WR16|TIG_VEREI RecName: Full=Trigger factor; Short=TF
gi|121555924|gb|ABM60073.1| trigger factor [Verminephrobacter eiseniae EF01-2]
Length = 440
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 82/450 (18%), Positives = 196/450 (43%), Gaps = 17/450 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + L+R++ + +P + + R+ + + GFRPGKVP++ + YG
Sbjct: 1 MAVTVETLDKLERKMTLSLPVTLIQSEVDMRLRRMARTVKMDGFRPGKVPMAVVARRYGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + + E ++ + R A RP IT +G ++ + +++
Sbjct: 61 AVQYEVLTNKVGEAFTVAANEANLRVAGRPRITETQGTAE---------GHVTFDAIFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P++ I+ ++++ + EV E ID+ + + K +F + ++ GD VTVD+
Sbjct: 112 FPEVRIADLANVEIEKLSTEVTEASIDKTLQGLRKQRRSFAQRAHDAPAQDGDGVTVDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + +N +F++G + E + + G+K+G+ K FP + +++AGK
Sbjct: 172 GKIDGEPFANGKAENFRFVIGEGPMPKEFEDAVRGMKSGESKTFPLAFPTQYHGQEVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K++ S V LA LG +R + +++ +R + +R
Sbjct: 232 TADFLVTVKKIESAHLPEVGEALARSLGSADGSIEGLRADIRKTLEREIRSHLRARNRRA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+++ + ++P++ V++E + ++ K E A+R
Sbjct: 292 VMNALLANADLELPKASVQDEIARLKANAYADLKQRGVKD---PERLEIPEDKVRPTAER 348
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V ++ + + + E++++ + + + +M+ + + E+ + +
Sbjct: 349 NVRLRLIFSEMVRAHGLRAKPEQVRAYVEELAASY-EKPAEMVRGYYGDRRRMLEIESSV 407
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
ED V + + ++V R ++ D+L +
Sbjct: 408 SEDNVTEFVFARAKVVARTISVDELLNPKD 437
>gi|114771108|ref|ZP_01448548.1| trigger factor [alpha proteobacterium HTCC2255]
gi|114548390|gb|EAU51276.1| trigger factor [alpha proteobacterium HTCC2255]
Length = 442
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 118/451 (26%), Positives = 229/451 (50%), Gaps = 12/451 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +EGLKR + + + L + N ++ + + +KGFR GKVP++ +K +G
Sbjct: 1 MAITETLNEGLKRGYTIKVTAAELDATVNAKLTEAQPNIELKGFRKGKVPMAMLKKQHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L E + E + + L K ++ A +P + + + + D+++ +SY+
Sbjct: 61 ALLGEAMQETVDGEMNSHLEKSGDKPAGQPEMKMT-------NENWKDGDDVEVSVSYEC 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE--TESEIGDKVTVDYT 178
LP + F ++++Q + + E +I + +A+ + FE K+ ++++ GD+V +++
Sbjct: 114 LPIVPEVDFSKIKLSQMVVKAGEADIKEALDNLAETSQDFEDKKAGSKAKNGDQVVINFL 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + + ++GS E LVG K GD E+ FP D+ ++LAGK
Sbjct: 174 GKVDGEAFDGGQADDYPLVLGSNSFIPGFEEQLVGSKAGDDVEVNVSFPGDYGAENLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ I V S + +N++LA + G E + +R S+++++ + R +KR ++
Sbjct: 234 DAIFSCKINAVKSAIKAEINDELAKKFGAEDLNDLRNKISERLEEEFKGASRIVMKRDLM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + F++PE LV E I ++ E N + D + E + LA RRV
Sbjct: 294 DSLEKLVDFELPEGLVSTEAGQIAHQLWHE---DNPDVEGHDHPEIETTDEHTKLAVRRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G I V++ EMQ A+ QQ ++ + ++ ++ QK P ++RAP+FE
Sbjct: 351 RLGLLLAEVGNIKEITVSDTEMQQAVIQQAQQYGSNAQQFFEYVQKNPQVQQQIRAPLFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
+KV+DHI+ ++ D +V+ ++L
Sbjct: 411 EKVVDHIVSVAKMTDNEVSKEELQKAVEALE 441
>gi|317164459|gb|ADV08000.1| trigger factor [Neisseria gonorrhoeae TCDC-NG08107]
Length = 437
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 207/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 62 SAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G++ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 234 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 294 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYADPSRLQAPTSLAVE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVNEKALSFDEVMGAQA 437
>gi|296314501|ref|ZP_06864442.1| trigger factor [Neisseria polysaccharea ATCC 43768]
gi|296838808|gb|EFH22746.1| trigger factor [Neisseria polysaccharea ATCC 43768]
Length = 437
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 98/448 (21%), Positives = 208/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D S K+ +++
Sbjct: 62 SAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDDQES--------FKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPE++ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGEGKDVTVNFPEEYHGKDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 234 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVNEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV E + +++ + + L + A+RRV
Sbjct: 294 NALLKAVELKVPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAVE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVSEKALSFDEVMGAQA 437
>gi|212212798|ref|YP_002303734.1| trigger factor [Coxiella burnetii CbuG_Q212]
gi|226738678|sp|B6J0W1|TIG_COXB2 RecName: Full=Trigger factor; Short=TF
gi|212011208|gb|ACJ18589.1| trigger factor, ppiase [Coxiella burnetii CbuG_Q212]
Length = 442
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 97/446 (21%), Positives = 218/446 (48%), Gaps = 13/446 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ GLK+ L + +P+ + ++ R+ + A I FRPGK + ++ LYGK+IL
Sbjct: 8 SIEKLGGLKQRLTITVPAEEVDKAYKSRLLKVARTAKIPKFRPGKASPAVVEKLYGKAIL 67
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E E+I+ + E + + + A P I +++ I K +++++ P+
Sbjct: 68 QEVGSELIQSSLREAVEEHQLQVAGAPDIKMDK---------ILRGEPFKYVVNFEVYPE 118
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
I + S + + E+ E+++D+ + + K ++ + ++ D+V +D+ ++D
Sbjct: 119 ITLESLAGETIERTQVEITEEDLDKMLEALRKQYAEWKEVDRPAKADDRVIIDFEGTLDG 178
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E S K+ Q +GS + + E + G+K G+ K ++ FP D+ +DLAGK N
Sbjct: 179 KPFERGSAKDFQLELGSKRMIAGFEEGIEGMKPGESKALDITFPADYPSEDLAGKAAVFN 238
Query: 244 FSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++++V +P V++ A RLG + A+R +++ + K+K +LD +
Sbjct: 239 ITLQKVMAPELPVLDEQFAERLGIKEGGLEALRQKVRTNMEKEVHHHMENKLKMAVLDKL 298
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ +VPESL+E E + + Q R +++ K + E Y A +RV G
Sbjct: 299 IERNPIEVPESLIEAEIDHLQQMTRQQVAMQTHKP-DEAKKMELPRDPYREQATKRVKLG 357
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++L + +++ I+ E++++ + + + +K++ + L+E+ + + ED+
Sbjct: 358 LLLAEVVKQHKIKADPEQLRARVEEVAASY-QDPEKVISWYYSNKQMLSEIESVVLEDQA 416
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +++ D+ + +++ +
Sbjct: 417 VAQLMSELEVKDQAIPYEEAVKQIQQ 442
>gi|329120060|ref|ZP_08248730.1| trigger factor [Neisseria bacilliformis ATCC BAA-1200]
gi|327463591|gb|EGF09909.1| trigger factor [Neisseria bacilliformis ATCC BAA-1200]
Length = 436
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 203/448 (45%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + L+R+ + +P + ++R++ +A I GFRPGK PL I+S+YG
Sbjct: 1 MTVTLETLDNLERKAVLSLPWAAINAECDKRLKQTARRARIDGFRPGKAPLGMIQSMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++ ++E+ ++ + + A P + EG+ D + + +++
Sbjct: 61 GIQNDVMNELAQKAFFDAALAEGWKIAGMPRLEGIEGQDDPEN--------FRFSGVFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+++I ++ + V + E+++ + + + F E ++ GD+V +D+ +
Sbjct: 113 FPEVKIGDLSTQEIEEVDAAVGDAEVEKTIEILRQQRTRFNRVERAAQNGDRVIIDFAGT 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E S +N F++G + E + GLK G+ K++E FPED+ KD+AGK
Sbjct: 173 IGGEAFEGGSAQNYAFLLGQGQMLPEFEAGVNGLKEGESKDVEVNFPEDYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ V P+ V+ A LG MR + +++ + V + K +
Sbjct: 233 VFAITVRNVAEPVLPEVDEQFAKALGIADGSVETMRAEVKKNVEREVKRRVAAQNKEAAM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + F VP++LV +E + +++ + + + A+RRV
Sbjct: 293 DALLAVSEFPVPKALVADEAERLAAEMKQNFINQGMADA---KKLDLPADMFQEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L I N +E E++ S + + H ++++D + + L + E
Sbjct: 350 RLGLILAEIVRANGLEPKPEQIDSVIADFAESY-EHPQEVVDWYHAEKSRLDGPTSLAVE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V D +L ++ + +TFD++ N +
Sbjct: 409 ANVTDFVLGKAKVNAKTLTFDEVMGNKA 436
>gi|262369924|ref|ZP_06063251.1| trigger factor septum formation molecular chaperone [Acinetobacter
johnsonii SH046]
gi|262314963|gb|EEY96003.1| trigger factor septum formation molecular chaperone [Acinetobacter
johnsonii SH046]
Length = 443
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 101/449 (22%), Positives = 214/449 (47%), Gaps = 16/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ I GFRPGKVP++ ++ YG
Sbjct: 1 MQVTSEAVSGVTRRLNVSVPTSRVNEQFEARLKRTAKTVKINGFRPGKVPVNVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E + +II++ V E + + A P+I +E + D L + ++
Sbjct: 61 GIYQEVVSDIIRDTVFEAIQQEKINAVGMPNIEKSELKDDA----------LVYEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ FD L+V + EV++K++D+ + + K ++ + ++ +VT D+ S
Sbjct: 111 YPEV-NVKFDGLEVERKASEVNDKDVDQMIENLQKQRASWAETKGMAKKDMQVTFDFEGS 169
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E S ++ + ++GS + + +VG+K G++K I+ FPED+ ++LAGK
Sbjct: 170 VDGEKFEGGSAEDFKLVLGSGRMIPGFEDGIVGMKKGEEKVIDVTFPEDYQAENLAGKSA 229
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K V V+ + G E ++ + +++ + +R +VK
Sbjct: 230 QFKITVKLVEKQKLPEVDAEFLKIFGLTEEEGIEKLKADVRKNMEREVKNGLRNQVKGAA 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + ++P S+V E + Q++ + + + + + A++
Sbjct: 290 FDALVAANEVELPTSMVAQEVDRQRQQMIQQFTQQFGAQGAKAFDSSMLPDELFKEQAEK 349
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + IEV + + + + + +++++F+ +++ A +
Sbjct: 350 SVKLGVLVSKVLADAKIEVDQARVDAYIEDMASSY-EDPAEVIEYFKNDKQQRSQIEAVV 408
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+DHIL S ++ D V+++ L
Sbjct: 409 LEDQVVDHILASAKVTDTVVSYEDLLKEQ 437
>gi|255321159|ref|ZP_05362325.1| trigger factor [Acinetobacter radioresistens SK82]
gi|255301713|gb|EET80964.1| trigger factor [Acinetobacter radioresistens SK82]
Length = 443
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 94/449 (20%), Positives = 213/449 (47%), Gaps = 15/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ I GFR GKVP++ ++ YG
Sbjct: 1 MQVTSEAVSGVARRLNVSVPTSRINEQFEARLKRTAKTVKINGFRQGKVPVNVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +++II++ V E + + A P+I E + D L + ++
Sbjct: 61 GIYQEVVNDIIRDTVFEAIQQEKINAVGMPNIDKVENKDDA----------LVYEATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + D L V + E+ +K++D+ + + K + + ++ +VT D+ +
Sbjct: 111 YPEVEVKALDTLTVERKTSEIQDKDVDQMIENLQKQRQTWVETKGMAKKDMQVTFDFEGT 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S + + ++GS + + ++G+K G++K I+ FPED+ ++LAGK
Sbjct: 171 IDGEKFEGGSATDFKLVLGSGRMIPGFEDGIIGMKKGEEKVIDVTFPEDYQAENLAGKAA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K+V ++ + G E ++ + +++ +R +VK+
Sbjct: 231 QFKITVKQVEKAKLPELDAEFLQTFGVSEEEGIDKLKADVRKNMEREVRNGLRNQVKQAA 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + +VP ++V E + Q++ + + + + + A++
Sbjct: 291 FDALVEANEVEVPSAMVAQEIDRQRQQMIQQFTQQFGGANAQTFDKSMLPDELFKEQAEK 350
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + +EV +++ + + +++++F+ A++ A +
Sbjct: 351 SVKLGVLVSKVLADAKLEVDPARVEAYIEDMASSY-EDPTEVIEYFKNDKQQRAQIEAVV 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+D+IL + Q+ D +V+++ L
Sbjct: 410 LEDQVVDYILAAAQVSDTEVSYEDLLKEQ 438
>gi|224824980|ref|ZP_03698086.1| trigger factor [Lutiella nitroferrum 2002]
gi|224602651|gb|EEG08828.1| trigger factor [Lutiella nitroferrum 2002]
Length = 435
Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats.
Identities = 105/448 (23%), Positives = 220/448 (49%), Gaps = 15/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + L+R +++ +P + ER++++ KA I+GFRPGK PL ++ YG
Sbjct: 1 MQAQLETLSNLERRMNIALPMAAIDAQVTERLKNMARKAKIQGFRPGKAPLKIVEMNYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E +++ + +S++ R A P E D S K S+++
Sbjct: 61 QVREEVLGEQVQQGFYKAVSEQKLRVAGYPRFEPVANEGDKDS--------FKFAASFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ +V + + V E EID+ + + K +E E E+ GD+V +D+ S
Sbjct: 113 YPEVKVGELVGKEVEKPVVVVTEAEIDKTIDILRKQRTRYERVEREAATGDRVIIDFKGS 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V+ + S +N F++G + ++ + G+K + K I FPED+ KD+AGK
Sbjct: 173 IDGVLFDGGSAENFPFVLGQGQMLADFEAGVTGMKEDEVKNITVVFPEDYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K V + VN + A LG MR + +++ + ++ +K ++
Sbjct: 233 VFEITVKNVAAATLPEVNEEFAKLLGIADGDIEKMRAEIKKNVEREVKRRLQASIKENVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++P++LV+ E ++++ R +M S K + + E A+RRV
Sbjct: 293 QALLDVTEIELPKALVQLEVGRLIEQARRDMESRGLKVKEMPFPPELF----QQQAERRV 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + +N +E E++++ + + + H ++++ + P + + + E
Sbjct: 349 ALGLILAEVVAENKLEAKPEQIKAMIEEFAESY-EHPEEVVQWYYASPERIEGPTSMVLE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
D V++ +L +V+++++FD L N++
Sbjct: 408 DNVVEFVLGKANVVEKEMSFDALMGNNA 435
>gi|225075321|ref|ZP_03718520.1| hypothetical protein NEIFLAOT_00324 [Neisseria flavescens
NRL30031/H210]
gi|224953496|gb|EEG34705.1| hypothetical protein NEIFLAOT_00324 [Neisseria flavescens
NRL30031/H210]
Length = 436
Score = 232 bits (592), Expect = 6e-59, Method: Composition-based stats.
Identities = 100/448 (22%), Positives = 210/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P +++ ++++ + +A I GFRPGK P I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSKINAETEKKLKQTQRRAKIDGFRPGKAPFKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ E+ ++ + A P E + D S K+ +++
Sbjct: 61 SAQNDVINELVQREFYEVAVAQELKVAGYPRFEGVEEQDDQES--------FKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E++ GD+V +D+
Sbjct: 113 FPEVTIGDLSVQEVEKVTATVGDAEVDQTVEILRKQRTRFNHVEREAQNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + SE +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGAGQMLSEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKSA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG E MR + + + E + ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDADFAKALGIEDGDVAKMREEVKKNVGREVERRIGEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAADLQVPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + E+N +E TE+++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVEENKLEPTEDQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQGPTSLAVE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLSKAKVTEKALSFDEVMGAQA 436
>gi|253999171|ref|YP_003051234.1| trigger factor [Methylovorus sp. SIP3-4]
gi|313201273|ref|YP_004039931.1| trigger factor [Methylovorus sp. MP688]
gi|253985850|gb|ACT50707.1| trigger factor [Methylovorus sp. SIP3-4]
gi|312440589|gb|ADQ84695.1| trigger factor [Methylovorus sp. MP688]
Length = 433
Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats.
Identities = 102/447 (22%), Positives = 196/447 (43%), Gaps = 16/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L+R + V +P + + +RI + A + GFRPGKVP+ + YG
Sbjct: 1 MAATVETISNLERRITVSVPLKPIEEEVTQRINRLARTAKLPGFRPGKVPMKLVYQQYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E ++ E + + R A P+I + EG + ++++
Sbjct: 61 QVRDEVFSGAVERTFTEAVQENKLRVAGYPNIEPKQS---------EGGEHFEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ EI +++ + + E+ E ++ + + K +E + S+ GDKV +
Sbjct: 112 FPEFEIGDLSKVKIERPVLEIGEADVKKTTDVLLKQRATYEPVKRASKKGDKVNIALRAL 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D +E S++ + I+G +E + L+G K G QK + +P DH + LAGK V
Sbjct: 172 IDGNEVERTSEQGLDLILGEGGRVAEFDDQLIGNKVGSQKTFDISYPADHKPEQLAGKTV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ V ++ D A LG E M+ Q ++Q VR KVK Q+
Sbjct: 232 TYEVTFNTVQQAKLPELDADFARGLGVEDGDVEKMKAEIKQSLEQEVAKRVRAKVKEQVF 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++P++++E E N ++Q + + V + AKR
Sbjct: 292 QALIENVALELPKAIIEAETNRVMQATQNNLQQRGVDVSTVTLDPAMFEE----QAKRNA 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++L + KN+++ E++++ + Q F + ++ + P L E + E
Sbjct: 348 SLRLILSELVNKNSLQANAEQVRAMVDQFAQSF-ERPEDVVRWYYDDPKRLDEPASLATE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
+ V++ +L+S ++ D+KV FD L N+
Sbjct: 407 ENVVNWVLQSAKVSDKKVKFDDLMGNA 433
>gi|261401253|ref|ZP_05987378.1| trigger factor [Neisseria lactamica ATCC 23970]
gi|269208736|gb|EEZ75191.1| trigger factor [Neisseria lactamica ATCC 23970]
Length = 437
Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats.
Identities = 98/448 (21%), Positives = 210/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D LK+ +++
Sbjct: 62 SAQNDVINEMVQRRFYDVAVAQELKVAGFPRFEGVEEQDD--------KEFLKIAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDKTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E + G+K G+ K++ FPED+ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVAGMKAGESKDVTVNFPEDYHGKDVAGKSA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P+ V+ D A LG MR + + + E V+++ K ++
Sbjct: 234 VFAITLNNVSEPVLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVKEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV E + +++ + + L + A+RRV
Sbjct: 294 NALLKAVELKVPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TE+++++ + + ++++D + P+ L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEDQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQGPTSLAVE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVSEKALSFDEVMGAQA 437
>gi|90407421|ref|ZP_01215605.1| trigger factor [Psychromonas sp. CNPT3]
gi|90311452|gb|EAS39553.1| trigger factor [Psychromonas sp. CNPT3]
Length = 435
Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats.
Identities = 87/447 (19%), Positives = 214/447 (47%), Gaps = 16/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R + + + ++ FN RI + + GFR GKVP+S I +G
Sbjct: 1 MQVSVEATKGLERTMTITVAADVFEKEFNGRIHHLSKTQRVDGFRAGKVPVSVIVKRFGY 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ +E E++++ E + A P++ E + D ++++
Sbjct: 61 AVENEVAGEVMQKNFFEAIMAEKLNPAGAPTVAPKER---------KKGEDFIFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +L ++++ +V + ++D+ + + K + + + ++ +VT+D+ S
Sbjct: 112 YPEVELKDLAELALSKEDAQVTDADLDKMIETLRKQHATWSEVKVDAADEHQVTLDFEGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D I E + Q ++GS + +VG K G + IE FP ++ ++L GK
Sbjct: 172 IDGEIFEGGKAEGFQIVLGSGRMIPGFESGIVGNKVGSEFTIEVNFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +V + ++ + + G ES + ++ + +++ E +++ K K +L
Sbjct: 232 TFKINLHKVEEQILPEISAEFVKKFGVESGEINELKEDVKKNMQRELEQVLKNKAKDMVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ DVP++LVE+E N + ++ + ++ E + + A++RV
Sbjct: 292 TALVEGNEVDVPKALVESEVNILRKQAMERYGKQ----MDPKNLPELPAELFTEQAEKRV 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + + N ++V +++ + L + + +++++++ + + E
Sbjct: 348 KVGLLLGEVIKVNELKVDNDKV-ATLIESAASAYENPLEVVEYYKNNKEMMQNMENVALE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ +D IL ++ + + TFD++ + +
Sbjct: 407 EQAVDFILAKAKVTNEQKTFDEIMNKT 433
>gi|254673128|emb|CBA07901.1| trigger factor [Neisseria meningitidis alpha275]
gi|261392407|emb|CAX49949.1| trigger factor (TF) [Neisseria meningitidis 8013]
gi|325128391|gb|EGC51274.1| trigger factor [Neisseria meningitidis N1568]
Length = 436
Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 207/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 61 SAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 113 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G++ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVNEKALSFDEVMGAQA 436
>gi|325204313|gb|ADY99766.1| trigger factor [Neisseria meningitidis M01-240355]
Length = 436
Score = 232 bits (591), Expect = 8e-59, Method: Composition-based stats.
Identities = 98/448 (21%), Positives = 207/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D LK+ +++
Sbjct: 61 SAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDD--------KESLKIAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 113 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G++ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + E V ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVKKNVSHEVERRVNEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVNEKALSFDEVMGAQA 436
>gi|59801022|ref|YP_207734.1| trigger factor [Neisseria gonorrhoeae FA 1090]
gi|293398886|ref|ZP_06643051.1| trigger factor tig [Neisseria gonorrhoeae F62]
gi|67461601|sp|Q5F915|TIG_NEIG1 RecName: Full=Trigger factor; Short=TF
gi|59717917|gb|AAW89322.1| putative trigger factor [Neisseria gonorrhoeae FA 1090]
gi|291610300|gb|EFF39410.1| trigger factor tig [Neisseria gonorrhoeae F62]
Length = 437
Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats.
Identities = 95/448 (21%), Positives = 205/448 (45%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVEILENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 62 SAQNDVINELVQRRFYDVAVAQELKVAGYPRFEGVEEQDD--------KESFKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F + E+ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVDREARNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPE++ KD+AGK
Sbjct: 174 IDGEPFAGGTSKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEEYHGKDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P V+ D A LG MR + + + E V ++ K ++
Sbjct: 234 VFTITLNNVSEPTLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVNEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV E + +++ + + L + A+RRV
Sbjct: 294 NALIKAVELKVPVALVNEEAARLANEMKQNFVNQGMTDAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TE ++++ + + ++++D + + L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEGQIKAVVANFAESY-EDPQEVIDWYYADTSRLQAPTSLAVE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ + ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVNKKALSFDEVMGAQA 437
>gi|262374982|ref|ZP_06068216.1| trigger factor [Acinetobacter lwoffii SH145]
gi|262309995|gb|EEY91124.1| trigger factor [Acinetobacter lwoffii SH145]
Length = 443
Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats.
Identities = 99/449 (22%), Positives = 217/449 (48%), Gaps = 16/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + G+ R L+V +P++R+ + F R++ A I GFRPGKVP++ ++ YG
Sbjct: 1 MQVTSEAVSGVARRLNVSVPTSRINEQFEARLKRTAKTAKINGFRPGKVPVNVVRREYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +++II++ V E + + A P+I E + D L + ++
Sbjct: 61 GIYQEVVNDIIRDTVFEAIQQEKINAVGMPNIEKTEMKDDA----------LVYTATVEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ D L+V + EV++K++++ + + K A+ + ++ +VT D+ S
Sbjct: 111 YPEIEVKF-DGLEVERKAAEVNDKDVEKMIENLQKQRAAWAETKGMAKKDMQVTFDFEGS 169
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E S ++ + ++GS + + +VG+K G++K I+ FPED+ ++LAGK+
Sbjct: 170 IDGEKFEGGSAEDFKLVLGSGRMIPGFEDGIVGMKKGEEKVIDVTFPEDYQAENLAGKQA 229
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K V ++ + G E ++ + +++ + +R +VK
Sbjct: 230 QFKITVKLVEKQKLPEIDTEFLKIFGVSEEEGVEKLKADVRKNMEREVKNGLRNQVKGAT 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQNVDSIDEEDLQYYHMLAKR 356
D + ++P +++ E + Q++ + + + + + A++
Sbjct: 290 FDALVAANEVELPAAMLAQEIDRQRQQMIQQFTQQFGAQGAKAFDSSMLPDELFKEQAEK 349
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V G+++ + IEV +++ + + +++++F+ A++ A +
Sbjct: 350 SVKLGVLVSRVLADAKIEVDAARVEAYIEDMASSY-EDPNEVIEYFKNDAQQRAQIEAVV 408
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
ED+V+D+IL S ++ D V+++ L
Sbjct: 409 LEDQVVDYILASAKVTDATVSYEDLLKEQ 437
>gi|161829878|ref|YP_001596951.1| trigger factor [Coxiella burnetii RSA 331]
gi|161761745|gb|ABX77387.1| trigger factor [Coxiella burnetii RSA 331]
Length = 437
Score = 232 bits (591), Expect = 9e-59, Method: Composition-based stats.
Identities = 98/446 (21%), Positives = 218/446 (48%), Gaps = 13/446 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ GLK+ L + +P+ + ++ R+ + A I FRPGK + ++ LYGK+IL
Sbjct: 3 SIEKLGGLKQRLTITVPAEEVDKAYKSRLLKVARTAKIPKFRPGKASPAVVEKLYGKAIL 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E E+I+ + E + + R A P I +++ I K +++++ P+
Sbjct: 63 QEVGSELIQSSLREAVEEHQLRVAGAPDIKMDK---------ILRGEPFKYVVNFEVYPE 113
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
I + S + + E+ E+++D+ + + K ++ + ++ D+V +D+ ++D
Sbjct: 114 ITLESLAGETIERTQVEITEEDLDKMLEALRKQYAEWKEMDRPAKADDRVIIDFEGTLDG 173
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E S K+ Q +GS + + E + G+K G+ K ++ FP D+ +DLAGK N
Sbjct: 174 KPFERGSAKDFQLELGSKRMIAGFEEGIEGMKPGESKALDITFPADYPSEDLAGKAAVFN 233
Query: 244 FSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++++V +P V++ A RLG + A+R +++ + K+K +LD +
Sbjct: 234 ITLQKVMAPELPVLDEQFAERLGIKEGGLEALRQKVRTNMEKEVHHHMENKLKMAVLDKL 293
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ +VPESL+E E + + Q R +++ K + E Y A +RV G
Sbjct: 294 IERNPIEVPESLIEAEIDHLQQMTRQQVAMQTHKP-DEAKKMELPRDPYREQATKRVKLG 352
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++L + +++ I+ E++++ + + + +K++ + L+E+ + + ED+
Sbjct: 353 LLLAEVVKQHKIKADPEQLRARVEEVAASY-QDPEKVISWYYTNKQMLSEIESVVLEDQA 411
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +++ D+ + +++ +
Sbjct: 412 VAQLMSELEVKDQAIPYEEAVKQIQQ 437
>gi|325144547|gb|EGC66846.1| trigger factor [Neisseria meningitidis M01-240013]
Length = 437
Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 207/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 62 SAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G++ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 234 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 294 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVNEKALSFDEVMGAQA 437
>gi|194098887|ref|YP_002001951.1| trigger factor [Neisseria gonorrhoeae NCCP11945]
gi|239999172|ref|ZP_04719096.1| trigger factor [Neisseria gonorrhoeae 35/02]
gi|240016362|ref|ZP_04722902.1| trigger factor [Neisseria gonorrhoeae FA6140]
gi|240113151|ref|ZP_04727641.1| trigger factor [Neisseria gonorrhoeae MS11]
gi|240115907|ref|ZP_04729969.1| trigger factor [Neisseria gonorrhoeae PID18]
gi|240125944|ref|ZP_04738830.1| trigger factor [Neisseria gonorrhoeae SK-92-679]
gi|240128456|ref|ZP_04741117.1| trigger factor [Neisseria gonorrhoeae SK-93-1035]
gi|260440278|ref|ZP_05794094.1| trigger factor [Neisseria gonorrhoeae DGI2]
gi|268595003|ref|ZP_06129170.1| trigger factor [Neisseria gonorrhoeae 35/02]
gi|268599231|ref|ZP_06133398.1| trigger factor [Neisseria gonorrhoeae MS11]
gi|268601578|ref|ZP_06135745.1| trigger factor [Neisseria gonorrhoeae PID18]
gi|268684538|ref|ZP_06151400.1| trigger factor [Neisseria gonorrhoeae SK-92-679]
gi|268686848|ref|ZP_06153710.1| trigger factor [Neisseria gonorrhoeae SK-93-1035]
gi|291043573|ref|ZP_06569289.1| trigger factor [Neisseria gonorrhoeae DGI2]
gi|238690214|sp|B4RMG6|TIG_NEIG2 RecName: Full=Trigger factor; Short=TF
gi|193934177|gb|ACF30001.1| trigger factor [Neisseria gonorrhoeae NCCP11945]
gi|268548392|gb|EEZ43810.1| trigger factor [Neisseria gonorrhoeae 35/02]
gi|268583362|gb|EEZ48038.1| trigger factor [Neisseria gonorrhoeae MS11]
gi|268585709|gb|EEZ50385.1| trigger factor [Neisseria gonorrhoeae PID18]
gi|268624822|gb|EEZ57222.1| trigger factor [Neisseria gonorrhoeae SK-92-679]
gi|268627132|gb|EEZ59532.1| trigger factor [Neisseria gonorrhoeae SK-93-1035]
gi|291012036|gb|EFE04025.1| trigger factor [Neisseria gonorrhoeae DGI2]
Length = 437
Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats.
Identities = 96/448 (21%), Positives = 206/448 (45%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVEILENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 62 SAQNDVINELVQRRFYDVAVAQELKVAGYPRFEGVEEQDD--------KESFKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F + E+ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVDREARNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPE++ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEEYHGKDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P V+ D A LG MR + + + E V ++ K ++
Sbjct: 234 VFTITLNNVSEPTLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVNEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV E + +++ + + L + A+RRV
Sbjct: 294 NALIKAVELKVPVALVNEEAARLANEMKQNFVNQGMTDAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + + L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYADTSRLQAPTSLAVE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ + ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVNKKALSFDEVMGAQA 437
>gi|307822657|ref|ZP_07652888.1| trigger factor [Methylobacter tundripaludum SV96]
gi|307736261|gb|EFO07107.1| trigger factor [Methylobacter tundripaludum SV96]
Length = 431
Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats.
Identities = 92/446 (20%), Positives = 200/446 (44%), Gaps = 17/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L R++ V +P + + R++ + + + GFRPGKVP IK +YG
Sbjct: 1 MQVSVEKTSELSRKMTVSVPEEIVQEKMAARLKSLAREVKVDGFRPGKVPQHVIKKMYGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E ++++ E L ++D R A P I + K +++
Sbjct: 61 RVRGEIAGDLVESTYFEALKEQDLRPAGYPHI-----------HSSDEAEGFKYTAEFEV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I + + ++V++ + V + ++D + ++ ++ + E S+ D+ T+ ++ +
Sbjct: 110 YPEISLEGVEQIEVSRPVATVQDVDVDGMIEKLRAQKKSWTIVERASQEHDRATISFSGA 169
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ D +N Q +G+ + E L+GLK G K E FPE++ + LAGK
Sbjct: 170 SEDENFTDGKVENYQVEIGAKQMIPGFEENLIGLKAGASKTFEVSFPEEYGNEKLAGKVA 229
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + + + +++ G + S A R ++ E +R K+K +++
Sbjct: 230 KFEVEVVSIEESVLPEIDDAFIKAYGIDGSVDAFREDIKGNLESELEQALRGKLKNAVMN 289
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ K VP +LV+ E +++ K +++ + + AKRRV
Sbjct: 290 ALYEKIQIAVPNTLVDQEVESMMKPYIETAKRQKMKLEDL----KLPRDAFEDQAKRRVA 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L I KN+I+V + +++S + + +++ + + L ++R + E+
Sbjct: 346 LGLILSEIIHKNDIKVDDNKVRSTIEDMAKSY-ERPGDVVEWYYSDESRLNDVRQMVLEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNS 445
+ ID ++ ++ D + F
Sbjct: 405 QTIDWLVARAKVSDEAINFTDAMSKQ 430
>gi|319410579|emb|CBY90948.1| trigger factor (TF) [Neisseria meningitidis WUE 2594]
Length = 436
Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 207/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 61 SAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 113 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G++ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVNEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVNEKALSFDEVMGAQA 436
>gi|304387381|ref|ZP_07369573.1| trigger factor [Neisseria meningitidis ATCC 13091]
gi|304338632|gb|EFM04750.1| trigger factor [Neisseria meningitidis ATCC 13091]
Length = 437
Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 208/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 62 SAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G++ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKSA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V++D A LG MR + + + E V ++ K ++
Sbjct: 234 VFTITLNNVSEATLPEVDSDFAKALGIADGDVAKMREEVKKNVSREVERRVNEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 294 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEEQVKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVNEKALSFDEVMGAQA 437
>gi|212219039|ref|YP_002305826.1| trigger factor [Coxiella burnetii CbuK_Q154]
gi|226738677|sp|B6J8W5|TIG_COXB1 RecName: Full=Trigger factor; Short=TF
gi|212013301|gb|ACJ20681.1| trigger factor, ppiase [Coxiella burnetii CbuK_Q154]
Length = 442
Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 97/446 (21%), Positives = 217/446 (48%), Gaps = 13/446 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ GLK+ L + + + + ++ R+ + A I FRPGK + ++ LYGK+IL
Sbjct: 8 SIEKLGGLKQRLTITVSAEEVDKAYKSRLLKVARTAKIPKFRPGKASPAVVEKLYGKAIL 67
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E E+I+ + E + + R A P I +++ I K +++++ P+
Sbjct: 68 QEVGSELIQSSLREAVEEHQLRVAGAPDIKMDK---------ILRGEPFKYVVNFEVYPE 118
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
I + S + + E+ E+++D+ + + K ++ + ++ D+V +D+ ++D
Sbjct: 119 ITLESLAGETIERTQVEITEEDLDKMLEALRKQYAEWKEVDRPAKADDRVIIDFEGTLDG 178
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E S K+ Q +GS + + E + G+K G+ K ++ FP D+ +DLAGK N
Sbjct: 179 KPFERGSAKDFQLELGSKRMIAGFEEGIEGMKPGESKALDITFPADYPSEDLAGKAAVFN 238
Query: 244 FSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++++V +P V++ A RLG + A+R +++ + K+K +LD +
Sbjct: 239 ITLQKVMAPELPVLDEQFAERLGIKEGGLEALRQKVRTNMEKEVHHHMENKLKMAVLDKL 298
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ +VPESL+E E + + Q R +++ K + E Y A +RV G
Sbjct: 299 IERNPIEVPESLIEAEIDHLQQMTRQQVAMQTHKP-DEAKKMELPRDPYREQATKRVKLG 357
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++L + +++ I+ E++++ + + + +K++ + L+E+ + + ED+
Sbjct: 358 LLLAEVVKQHKIKADPEQLRARVEEVAASY-QDPEKVISWYYSNKQMLSEIESVVLEDQA 416
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +++ D+ + +++ +
Sbjct: 417 VAQLMSELEVEDQAIPYEEAVKQIQQ 442
>gi|254805113|ref|YP_003083334.1| trigger factor [Neisseria meningitidis alpha14]
gi|254668655|emb|CBA06321.1| trigger factor [Neisseria meningitidis alpha14]
gi|325142515|gb|EGC64916.1| trigger factor [Neisseria meningitidis 961-5945]
gi|325198464|gb|ADY93920.1| trigger factor [Neisseria meningitidis G2136]
Length = 436
Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 96/448 (21%), Positives = 206/448 (45%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 61 SAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 113 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPE++ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEEYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDIFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVDENKLEPTEEQVKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVNEKALSFDEVMGAQA 436
>gi|83950539|ref|ZP_00959272.1| trigger factor [Roseovarius nubinhibens ISM]
gi|83838438|gb|EAP77734.1| trigger factor [Roseovarius nubinhibens ISM]
Length = 443
Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 125/453 (27%), Positives = 245/453 (54%), Gaps = 12/453 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV E +EGLKR +++ + L D E++++ + + +KGFR GKVPL +K +G+
Sbjct: 1 MQVTETLNEGLKRGYSMVLTAKELDDKVTEKLKEAQPEIEMKGFRKGKVPLPLLKKQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + E + + + +R A PS+ + + + D+++ ++Y+
Sbjct: 61 RVLGEAMQEAVDGAMSKHFEDSGDRPAQEPSVKMT-------NEDWKEGDDVQIEMTYEA 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
LP+I + + + + + DEK++D ++ +A++ F ++ +S+ GD+V +D+
Sbjct: 114 LPEIPELDLKKVSLERMVVKADEKDVDEALSNLAESAQDFADRKKGSKSKEGDQVVIDFV 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + ++ ++GS + L+G+K G++K++ FPE++ LAGK
Sbjct: 174 GSVDGEEFEGGAAEDYPLVLGSNSFIPGFEDQLIGVKEGEEKDVNVSFPEEYQAAHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V P +N+DLA + G E A++G ++++ R VKR +L
Sbjct: 234 EALFKCTVKAVKEPKAAEINDDLAKKFGAEDLDALKGQVRERLEAEYAGAARAVVKRSLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +F++P ++VE E I ++ + N + Q D + E + + LA+RRV
Sbjct: 294 DQLDDMVSFELPPAMVEAEAKQIAHQLWHD---DNPEVQGHDHGEIETTEEHTKLAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L +G++ ++VT+ EM A+ + ++PG E++ + Q+ P ++RAPIFE
Sbjct: 351 RLGLLLAELGKRAEVQVTDAEMTQAIMNEARQYPGQERQFFEFVQQNPQMQQQMRAPIFE 410
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
+KV+D++L+ + D++V+ D L E E
Sbjct: 411 EKVVDYVLELATVKDKEVSKDDLQKAVEELDKE 443
>gi|240080481|ref|ZP_04725024.1| trigger factor [Neisseria gonorrhoeae FA19]
gi|240123753|ref|ZP_04736709.1| trigger factor [Neisseria gonorrhoeae PID332]
gi|268596617|ref|ZP_06130784.1| trigger factor [Neisseria gonorrhoeae FA19]
gi|268682380|ref|ZP_06149242.1| trigger factor [Neisseria gonorrhoeae PID332]
gi|268550405|gb|EEZ45424.1| trigger factor [Neisseria gonorrhoeae FA19]
gi|268622664|gb|EEZ55064.1| trigger factor [Neisseria gonorrhoeae PID332]
Length = 437
Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 95/448 (21%), Positives = 206/448 (45%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVEILENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 62 SAQNDVINELVQRRFYDVAVAQELKVAGYPRFEGVEEQDD--------KESFKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F + E+ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVDREARNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ +++ FPE++ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESEDVTVNFPEEYHGKDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P V+ D A LG MR + + + E V ++ K ++
Sbjct: 234 VFTITLNNVSEPTLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVNEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV E + +++ + + L + A+RRV
Sbjct: 294 NALIKAVELKVPVALVNEEAARLANEMKQNFVNQGMTDAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + + L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYADTSRLQAPTSLAVE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ + ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVNKKALSFDEVMGAQA 437
>gi|240013920|ref|ZP_04720833.1| trigger factor [Neisseria gonorrhoeae DGI18]
gi|240118205|ref|ZP_04732267.1| trigger factor [Neisseria gonorrhoeae PID1]
gi|240121489|ref|ZP_04734451.1| trigger factor [Neisseria gonorrhoeae PID24-1]
gi|254493944|ref|ZP_05107115.1| trigger factor [Neisseria gonorrhoeae 1291]
gi|268603917|ref|ZP_06138084.1| trigger factor [Neisseria gonorrhoeae PID1]
gi|226512984|gb|EEH62329.1| trigger factor [Neisseria gonorrhoeae 1291]
gi|268588048|gb|EEZ52724.1| trigger factor [Neisseria gonorrhoeae PID1]
Length = 437
Score = 232 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 95/448 (21%), Positives = 205/448 (45%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVEILENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 62 SAQNDVINELVQRRFYDVAVAQELKVAGYPRFEGVEEQDD--------KESFKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F + E+ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVDREARNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPE++ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEEYHGKDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V P V+ D A LG MR + + + E V ++ K ++
Sbjct: 234 VFTITLNNVSEPTLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVNEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP +LV E + +++ + + L + A+RRV
Sbjct: 294 NALIKAVELKVPVALVNEEAARLANEMKQNFVNQGMTDAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TE ++++ + + ++++D + + L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEGQIKAVVANFAESY-EDPQEVIDWYYADTSRLQAPTSLAVE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ + ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVNKKALSFDEVMGAQA 437
>gi|218768334|ref|YP_002342846.1| trigger factor [Neisseria meningitidis Z2491]
gi|12230727|sp|Q9JU32|TIG_NEIMA RecName: Full=Trigger factor; Short=TF
gi|121052342|emb|CAM08673.1| trigger factor [Neisseria meningitidis Z2491]
Length = 437
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 207/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 62 SAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G++ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 234 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVNEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 294 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVNEKALSFDEVMGAQA 437
>gi|325132487|gb|EGC55180.1| trigger factor [Neisseria meningitidis M6190]
gi|325138261|gb|EGC60830.1| trigger factor [Neisseria meningitidis ES14902]
Length = 436
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 95/448 (21%), Positives = 205/448 (45%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 61 SAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ D+V +D+
Sbjct: 113 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNSDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPE++ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEEYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 233 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDIFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVDENKLEPTEEQVKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVNEKALSFDEVMGAQA 436
>gi|165924011|ref|ZP_02219843.1| trigger factor [Coxiella burnetii RSA 334]
gi|165916534|gb|EDR35138.1| trigger factor [Coxiella burnetii RSA 334]
Length = 437
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 97/446 (21%), Positives = 217/446 (48%), Gaps = 13/446 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ GLK+ L + + + + ++ R+ + A I FRPGK + ++ LYGK+IL
Sbjct: 3 SIEKLGGLKQRLTITVSAEEVDKAYKSRLLKVARTAKIPKFRPGKASPAVVEKLYGKAIL 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E E+I+ + E + + R A P I +++ I K +++++ P+
Sbjct: 63 QEVGSELIQSSLREAVEEHQLRVAGAPDIKMDK---------ILRGEPFKYVVNFEVYPE 113
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
I + S + + E+ E+++D+ + + K ++ + ++ D+V +D+ ++D
Sbjct: 114 ITLESLAGETIERTQVEITEEDLDKMLEALRKQYAEWKEVDRPAKADDRVIIDFEGTLDG 173
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E S K+ Q +GS + + E + G+K G+ K ++ FP D+ +DLAGK N
Sbjct: 174 KPFERGSAKDFQLELGSKRMIAGFEEGIEGMKPGESKALDITFPADYPSEDLAGKAAVFN 233
Query: 244 FSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++++V +P V++ A RLG + A+R +++ + K+K +LD +
Sbjct: 234 ITLQKVMAPELPVLDEQFAERLGIKEGGLEALRQKVRTNMEKEVHHHMENKLKMAVLDKL 293
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ +VPESL+E E + + Q R +++ K + E Y A +RV G
Sbjct: 294 IERNPIEVPESLIEAEIDHLQQMTRQQVAMQTHKP-DEAKKMELPRDPYREQATKRVKLG 352
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++L + +++ I+ E++++ + + + +K++ + L+E+ + + ED+
Sbjct: 353 LLLAEVVKQHKIKADPEQLRARVEEVAASY-QDPEKVISWYYSNKQMLSEIESVVLEDQA 411
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +++ D+ + +++ +
Sbjct: 412 VAQLMSELEVKDQAIPYEEAVKQIQQ 437
>gi|73541073|ref|YP_295593.1| trigger factor [Ralstonia eutropha JMP134]
gi|119370924|sp|Q472D4|TIG_RALEJ RecName: Full=Trigger factor; Short=TF
gi|72118486|gb|AAZ60749.1| Trigger factor [Ralstonia eutropha JMP134]
Length = 451
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 91/463 (19%), Positives = 202/463 (43%), Gaps = 25/463 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ + IP + +R+ + + GFRPGKVP+ ++ YG+
Sbjct: 1 MSNVIENLGKLDRKVTLAIPKAEVEKEKQDRLVRLSKTVKMSGFRPGKVPMKMVEKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + +I ++D + A +P I G ++ ++++
Sbjct: 61 QVEFEVRFDKAARKFFDITKEQDVKVAGQPKFEIKTEGV--------GEDEVAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++++ +VT+ E+ + EID+ + + K V + V+ E
Sbjct: 113 YPEVKLGDLTGAEVTRTKTEITDAEIDKTIDILRKQRVHYHVRGEAGEHGDGGGDVTAQN 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VT+D+ ++ V ++ F++G + E +GLK G+ K FP D
Sbjct: 173 GDRVTLDFVGKIEGVEFAGGKAEDFPFVLGEGRMLPEFEAATLGLKVGESKSFPLSFPAD 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEF 287
+ KD+AGK ++K++ VN+ A LG MR + +++ +
Sbjct: 233 YHGKDVAGKTAEFTVTLKKIEWAHLPEVNDAFAKSLGIADGNVDKMRADIRENLEREVKR 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+K Q+++ + DVP++L+E + +++ R ++ +
Sbjct: 293 RTHAMLKDQVMEALLKVSELDVPKALIEQDQERLVEMARRDLEQRGMPNA---KDMPIPA 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G++L I + + +E +++++ + + K+++ +
Sbjct: 350 EMFAQQAERRVKLGLILAEIVKAHGLEAKADQIKAEIEDFAKSY-EDPKEVMRWYYGDQQ 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
LAE+ A + E+ V++ + ++ D+ V+F++L +
Sbjct: 409 RLAEMEAYVLENNVVNFVCDKAKVTDKSVSFEELTAEGNAQQA 451
>gi|261377746|ref|ZP_05982319.1| trigger factor [Neisseria cinerea ATCC 14685]
gi|269146031|gb|EEZ72449.1| trigger factor [Neisseria cinerea ATCC 14685]
Length = 437
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 99/448 (22%), Positives = 208/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVETLENLERKVVLSLPWFEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ +I ++ + A P E + D LK+ +++
Sbjct: 62 SAQNDVINEMVQRRFYDIAVAQELKVAGYPRFEGVEEQDD--------KESLKIAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E++ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAQNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKSA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V+++ K ++
Sbjct: 234 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVKKNVGREVERRVKEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 294 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQGPTSLAVE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVSEKALSFDEVMGAQA 437
>gi|121635024|ref|YP_975269.1| trigger factor [Neisseria meningitidis FAM18]
gi|166229909|sp|A1KUE0|TIG_NEIMF RecName: Full=Trigger factor; Short=TF
gi|120866730|emb|CAM10483.1| trigger factor [Neisseria meningitidis FAM18]
Length = 437
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 95/448 (21%), Positives = 205/448 (45%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 62 SAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E+ D+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNSDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G+ + E +VG+K G+ K++ FPE++ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNFPEEYHGKDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 234 VFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 294 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDIFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEEQVKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVNEKALSFDEVMGAQA 437
>gi|85707621|ref|ZP_01038687.1| trigger factor [Erythrobacter sp. NAP1]
gi|85689155|gb|EAQ29158.1| trigger factor [Erythrobacter sp. NAP1]
Length = 523
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 115/444 (25%), Positives = 244/444 (54%), Gaps = 12/444 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +EGLKR + + + ++D + I+ + + + GFRPGKVP + +K ++G+
Sbjct: 1 MAIKQTTNEGLKRAYVITLSAKEISDKIDAEIKKVAPQVKMPGFRPGKVPANLVKKMHGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +T++++I++ V ++ D R AM+P++++NE E D ++ + ++
Sbjct: 61 QLHGQTLNDMIRDSVDSLIKDEDLRPAMQPAVSLNE--------DYEEGKDAEITVELEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYT 178
LPQ++ S + L++ + V +++I+ +A IA N +++ + +++ +D+
Sbjct: 113 LPQVDAPSIEGLKLEKLTVPVSDEQIEEAIAGIAGQNKSYKDAAKTKKAADGNQLIIDFV 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + E ++ ++GS E LVG+K GD+K I FP+D+ + LAGK
Sbjct: 173 GKLGDEEFEGGKAEDAALVLGSGAFIPGFEEQLVGVKAGDEKTITVTFPKDYQAEHLAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++K V ++++ A LG +S ++ + +++Q + L R ++KR +L
Sbjct: 233 EATFDVTVKAVKVETETKIDDEFAKNLGLDSLEKLQEIMKGQLEQQTAGLTRTQMKRSLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D ++ + F+VP +V+ E+ I +++ E + + I++ + Y +A+RRV
Sbjct: 293 DQLAAGHDFEVPSKMVDAEFEQIWAQLQQEAAKEEDPEAALKQIED-EKDDYKGIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK-MLDHFQKYPNALAELRAPIF 417
G++L IG+ N +EVT +EM + Q ++ +++ + + Q+ P A A+LRAP++
Sbjct: 352 RLGLLLSEIGQANGVEVTGQEMNMLIQQAAAQYREEDRERFVQYIQQEPMAAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVTFDQL 441
EDKV+D + + +R+VT ++L
Sbjct: 412 EDKVVDFLFDKADVTEREVTAEEL 435
>gi|154705818|ref|YP_001424145.1| trigger factor [Coxiella burnetii Dugway 5J108-111]
gi|154355104|gb|ABS76566.1| trigger factor, ppiase [Coxiella burnetii Dugway 5J108-111]
Length = 437
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 98/446 (21%), Positives = 218/446 (48%), Gaps = 13/446 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ GLK+ L + +P+ + ++ R+ + A I FRPGK + ++ LYGK+IL
Sbjct: 3 SIEKLGGLKQRLTITVPAEEVDKAYKSRLLKVARTAKIPKFRPGKASPAVVEKLYGKAIL 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E E+I+ + E + + R A P I +++ I K +++++ P+
Sbjct: 63 QEVGSELIQSSLREAVEEHQLRVAGAPDIKMDK---------ILRGEPFKYVVNFEVYPE 113
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
I + S + + E+ E+++D+ + + K ++ + ++ D+V +D+ ++D
Sbjct: 114 ITLESLAGETIERTQVEITEEDLDKMLEALRKQYAEWKEVDRPAKADDRVIIDFEGTLDG 173
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E S K+ Q +GS + + E + G+K G+ K ++ FP D+ +DLAGK N
Sbjct: 174 KPFERGSAKDFQLELGSKRMIAGFEEGIEGMKPGESKALDITFPVDYPSEDLAGKAAVFN 233
Query: 244 FSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++++V +P V++ A RLG + A+R +++ + K+K +LD +
Sbjct: 234 ITLQKVMAPELPVLDEQFAERLGIKEGGLEALRQKVRTNMEKEVHHHMENKLKMAVLDKL 293
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ +VPESL+E E + + Q R +++ K + E Y A +RV G
Sbjct: 294 IERNPIEVPESLIEAEIDHLQQMTRQQVAMQTHKP-DEAKKMELPRDPYREQATKRVKLG 352
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++L + +++ I+ E++++ + + + +K++ + L+E+ + + ED+
Sbjct: 353 LLLAEVVKQHKIKADPEQLRARVEEVAASY-QEPEKVISWYYSNKQMLSEIESVVLEDQA 411
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +++ D+ + +++ +
Sbjct: 412 VAQLMGELEVKDQAIPYEEAVKQIQQ 437
>gi|308389432|gb|ADO31752.1| trigger factor [Neisseria meningitidis alpha710]
gi|325130324|gb|EGC53090.1| trigger factor [Neisseria meningitidis OX99.30304]
gi|325136184|gb|EGC58792.1| trigger factor [Neisseria meningitidis M0579]
Length = 436
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 208/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 1 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 61 SAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E++ GD+V +D+
Sbjct: 113 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAQNGDRVIIDFEGK 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G++ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 173 IDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTA 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 233 MFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVNEQTKESVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 293 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 350 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 409 SNVVDFVLGKAKVNEKALSFDEVMGAQA 436
>gi|188992777|ref|YP_001904787.1| trigger factor [Xanthomonas campestris pv. campestris str. B100]
gi|229558471|sp|B0RTF8|TIG_XANCB RecName: Full=Trigger factor; Short=TF
gi|167734537|emb|CAP52747.1| Ribosome-associated trigger factor (ATP-independent chaperone /
peptidyl-prolyl-cis-trans-isomerase) [Xanthomonas
campestris pv. campestris]
Length = 430
Score = 231 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 95/445 (21%), Positives = 200/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGESDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P +L V + EV + +ID+ + + + E +++GD V ++
Sbjct: 108 VPDFGDIDVTNLSVVRHTAEVTDADIDQMIENLRLQRRTWNPVERGAQVGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N L + + ++GS +F + + L GL G+ K + FP D + LAGK V
Sbjct: 168 AGNERLPAEGVETGSSVLGSGVMFDQIEKGLEGLSKGEDKALSIDFPADWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ VN + G + R +++ + + +++R++
Sbjct: 228 QVHVKAVEVSEPVLPEVNKEFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + +M + + N I + Q + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVENEARSMLAQQVDQMRRSGR---NPGEIPADAHQGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + + L + +++++ ++ P ++ LR+ +
Sbjct: 345 VLVGLLVGEVARRNELRLESKRVSETLRLIASTY-EEPEQVIEMYRNDPQLMSGLRSRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + + ++ ++F
Sbjct: 404 EEQVIDWIAERAKHTEQSLSFQDAI 428
>gi|325201977|gb|ADY97431.1| trigger factor [Neisseria meningitidis M01-240149]
gi|325208272|gb|ADZ03724.1| trigger factor [Neisseria meningitidis NZ-05/33]
Length = 437
Score = 231 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 97/448 (21%), Positives = 208/448 (46%), Gaps = 14/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L+R++ + +P + + +++++ + +A I GFRPGK PL I +YG
Sbjct: 2 MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA 61
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++ I+E+++ ++ ++ + A P E + D K+ +++
Sbjct: 62 SAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDD--------KESFKVAAIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I +V + V + E+D+ + + K F E E++ GD+V +D+
Sbjct: 114 FPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAQNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + KN F++G++ + E +VG+K G+ K++ FPED+ KD+AGK
Sbjct: 174 IDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V V+ D A LG MR + + + E V ++ K ++
Sbjct: 234 MFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVKKNVSREVERRVNEQTKESVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + P +LV E + +++ + + L + A+RRV
Sbjct: 294 NALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAA---NLDLPLDMFKEQAERRV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + ++N +E TEE++++ + + ++++D + P+ L + E
Sbjct: 351 SLGLILAKLVDENKLEPTEEQIKAVVANFAESY-EDPQEVIDWYYAEPSRLQAPTSLAIE 409
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSS 446
V+D +L ++ ++ ++FD++ +
Sbjct: 410 SNVVDFVLGKAKVNEKALSFDEVMGAQA 437
>gi|164686060|ref|ZP_01947335.2| trigger factor [Coxiella burnetii 'MSU Goat Q177']
gi|164601616|gb|EAX32040.2| trigger factor [Coxiella burnetii 'MSU Goat Q177']
Length = 437
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 97/446 (21%), Positives = 217/446 (48%), Gaps = 13/446 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ GLK+ L + + + + ++ R+ + A I FRPGK + ++ LYGK+IL
Sbjct: 3 SIEKLGGLKQRLTITVSAEEVDKAYKSRLLKVARTAKIPKFRPGKASPAVVEKLYGKAIL 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E E+I+ + E + + R A P I +++ I K +++++ P+
Sbjct: 63 QEVGSELIQSSLREAVEEHQLRVAGAPDIKMDK---------ILRGEPFKYVVNFEVYPE 113
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
I + S + + E+ E+++D+ + + K ++ + ++ D+V +D+ ++D
Sbjct: 114 ITLESLAGETIERTQVEITEEDLDKMLEALRKQYAEWKEVDRPAKADDRVIIDFEGTLDG 173
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E S K+ Q +GS + + E + G+K G+ K ++ FP D+ +DLAGK N
Sbjct: 174 KPFERGSAKDFQLELGSKRMIAGFEEGIEGMKPGESKALDITFPADYPSEDLAGKAAVFN 233
Query: 244 FSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++++V +P V++ A RLG + A+R +++ + K+K +LD +
Sbjct: 234 ITLQKVMAPELPVLDEQFAERLGIKEGGLEALRQKVRTNMEKEVHHHMENKLKMAVLDKL 293
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ +VPESL+E E + + Q R +++ K + E Y A +RV G
Sbjct: 294 IERNPIEVPESLIEAEIDHLQQMTRQQVAMQTHKP-DEAKKMELPRDPYREQATKRVKLG 352
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++L + +++ I+ E++++ + + + +K++ + L+E+ + + ED+
Sbjct: 353 LLLAEVVKQHKIKADPEQLRARVEEVAASY-QDPEKVISWYYSNKQMLSEIESVVLEDQA 411
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ +++ D+ + +++ +
Sbjct: 412 VAQLMSELEVEDQAIPYEEAVKQIQQ 437
>gi|332977272|gb|EGK14063.1| trigger factor [Psychrobacter sp. 1501(2011)]
Length = 445
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 101/448 (22%), Positives = 217/448 (48%), Gaps = 13/448 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
QV + +L V +P ++ + RI ++ A I GFR GKVP+SHI++ YG
Sbjct: 6 QVTTNKVNDNQTQLTVKVPVEQIQNKVEGRIRNVAKTAKIDGFRKGKVPVSHIRAQYGAG 65
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I E I+++I++ V E + D RA P+I + E + L + + +I
Sbjct: 66 IQQEVINDVIRDTVFEAIKAEDVRAVGMPNIDDVKLEDEF----------LVYQATVEIF 115
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P+I++ D++V + + ++++D + + K F KE E+ GD+VT D+ S+
Sbjct: 116 PEIKVEGISDIEVERHTANITDEDVDTMIDNLRKQRQEFAEKEGEAAEGDQVTFDFEGSI 175
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D E + ++ + ++GS + + +VG+K GD+K I+ FPE++ ++LAGKK +
Sbjct: 176 DGEKFEGGAAEDFKLVLGSGQMIPGFEDGIVGMKAGDEKTIDVTFPEEYQAENLAGKKAQ 235
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++K V ++ + G + ++ + + + + R +VK+ D
Sbjct: 236 FKINVKTVEEAKLPEIDAEFLELFGVKEGGVEQLKEDVRKNMTREVKNAARNQVKQAAFD 295
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ K FDVP ++++ E + + + + N D + + A R
Sbjct: 296 ALLEKNEFDVPSAMIDQEVDRQRNLMMQRFAQQFGGNANSIDKDMLPRELFEEQAIRAAR 355
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G+++ + E+N+++V +E +++ + + + ++++++ A + + + ED
Sbjct: 356 LGVLVSRVIEENDLKVDQERVETFIKETAENY-EDPAEVIEYYTNDAQQRANIESVVLED 414
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+V+D +L+ ++ D++V + L +
Sbjct: 415 QVVDFLLEQGKVTDKEVGYQDLLAAQQQ 442
>gi|241761836|ref|ZP_04759922.1| trigger factor [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|260752596|ref|YP_003225489.1| trigger factor [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|241373750|gb|EER63310.1| trigger factor [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|258551959|gb|ACV74905.1| trigger factor [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 493
Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats.
Identities = 140/440 (31%), Positives = 248/440 (56%), Gaps = 12/440 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ +E +EGLKR + I ++ + ++ + + + N+ GFRPGKVP + +YG
Sbjct: 1 METVETLNEGLKRNYTLTITADEIRKRIDQEVAEAAPRVNLPGFRPGKVPAKLVNKMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + +++ +++ V ++LS + E+ AM+P I + EG E D +L++ ++I
Sbjct: 61 SLAQDALNKALQDGVQKLLSDKGEKPAMQPEIELTEG--------YELGKDAELKVKFEI 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP++ SFDDL++ + E D ID ++ E A++ +F+ K+ ++E GD V VD+
Sbjct: 113 LPEVPEISFDDLKLERLTVEADNAVIDEKIKEFAEHQKSFDDSKKDHKAENGDLVVVDFV 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + ++ +G+ E LVG K G+ + ++ FPED+S+ L GK
Sbjct: 173 GKVDGEPFEGGTGSDMSVELGAGQFIPGFEEQLVGAKQGESRVLKVTFPEDYSVPYLKGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V P VN+D A LG ES +R L +I+Q L R +KR++L
Sbjct: 233 DAEFDVTVSDVRVPRKAEVNDDFAKSLGLESLDQLRDLMKGQIEQELNGLTRTYMKRKLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D +++ Y+F+VP +VE E+N I +++ +S + S+ + E++ Y +A+RRV
Sbjct: 293 DQLADSYSFEVPSQMVEAEFNQIWRQLEH-AASHEEDSEAALAEMEKERDEYRAIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELRAPIF 417
G+ L IG KNN+EV++ EM + Q R+ P ++ +++ ++ P A+LRAP++
Sbjct: 352 RLGLALSDIGAKNNVEVSQNEMNMLISQAAQRYNPADRQRFVEYLRQDPMMAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVT 437
EDKV+D + + I DR VT
Sbjct: 412 EDKVVDILFEKANITDRAVT 431
>gi|56551842|ref|YP_162681.1| trigger factor [Zymomonas mobilis subsp. mobilis ZM4]
gi|67461651|sp|Q5NNZ0|TIG_ZYMMO RecName: Full=Trigger factor; Short=TF
gi|56543416|gb|AAV89570.1| trigger factor [Zymomonas mobilis subsp. mobilis ZM4]
Length = 492
Score = 229 bits (584), Expect = 5e-58, Method: Composition-based stats.
Identities = 140/440 (31%), Positives = 248/440 (56%), Gaps = 12/440 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ +E +EGLKR + I ++ + ++ + + + N+ GFRPGKVP + +YG
Sbjct: 1 METVETLNEGLKRNYTLTITADEIRKRIDQEVAEAAPRVNLPGFRPGKVPAKLVNKMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + +++ +++ V ++LS + E+ AM+P I + EG E D +L++ ++I
Sbjct: 61 SLAQDALNKALQDGVQKLLSDKGEKPAMQPEIELTEG--------YELGKDAELKVKFEI 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP++ SFDDL++ + E D ID ++ E A++ +F+ K+ ++E GD V VD+
Sbjct: 113 LPEVPEISFDDLKLERLTVEADNAVIDEKIKEFAEHQKSFDDSKKDHKAENGDLVVVDFV 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + ++ +G+ E LVG K G+ + ++ FPED+S+ L GK
Sbjct: 173 GKVDGEPFEGGTGSDMSVELGAGQFIPGFEEQLVGAKQGESRVLKVTFPEDYSVPYLKGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V P VN+D A LG ES +R L +I+Q L R +KR++L
Sbjct: 233 DAEFDVTVSDVRVPRKAEVNDDFAKSLGLESLDQLRDLMKGQIEQELNGLTRTYMKRKLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D +++ Y+F+VP +VE E+N I +++ +S + S+ + E++ Y +A+RRV
Sbjct: 293 DQLADSYSFEVPSQMVEAEFNQIWRQLEH-AASHEEDSEAALAEMEKERDEYRAIAERRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELRAPIF 417
G+ L IG KNN+EV++ EM + Q R+ P ++ +++ ++ P A+LRAP++
Sbjct: 352 RLGLALSDIGAKNNVEVSQNEMNMLISQAAQRYNPADRQRFVEYLRQDPMMAAQLRAPLY 411
Query: 418 EDKVIDHILKSVQIVDRKVT 437
EDKV+D + + I DR VT
Sbjct: 412 EDKVVDILFEKANITDRAVT 431
>gi|253701610|ref|YP_003022799.1| trigger factor [Geobacter sp. M21]
gi|259533612|sp|C6E2T1|TIG_GEOSM RecName: Full=Trigger factor; Short=TF
gi|251776460|gb|ACT19041.1| trigger factor [Geobacter sp. M21]
Length = 435
Score = 229 bits (584), Expect = 6e-58, Method: Composition-based stats.
Identities = 98/439 (22%), Positives = 206/439 (46%), Gaps = 13/439 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ + +K++L+ IP+++++ ++ +IR A IKGFR GKVP+S I+ YG+
Sbjct: 1 MQISVESVNSIKKKLNFEIPADKVSAEVDKAYAEIRKHAAIKGFRKGKVPMSLIEKHYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + +++E +S++ P+I ++ ++ K + ++
Sbjct: 61 KMAEDVVKNLVQESYFSAVSEQGLNPVGYPAIESDQ---------LKKGEPFKYSATVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
P++E+ + L+V ++ EVD+ + ++ E+ + + + +GD VT D+
Sbjct: 112 FPEVEVKDYTGLEVVKEKLEVDDSVVAARLKEMQERMAQLGPAPEGHAAAMGDFVTFDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V E S ++ Q +GS E +VG+ G I+ FPE + DL+GK
Sbjct: 172 GSIDGVYFEGGSAEDFQLELGSGRFIPGFEEQMVGMTVGTNSTIKVNFPEGYGNADLSGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL--GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
S+KE+ +N+D A FE+ ++ ++ + + +++ +
Sbjct: 232 PADFEVSVKEIKVKELPELNDDFAKEFGEEFETLDLLKAKLAEINETQEASRINAELRDR 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++ + K +VPE+LV+ + +L+ + ++S + D+ + A+
Sbjct: 292 LIKALIEKNEIEVPEALVDRQVQMMLESTKQRLASQRLSLDMMGMTDDSYKAQFREAARE 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V ++L + EK IE TEEE+++ L + +K+ ++ A L A +
Sbjct: 352 QVKGSLLLDAVAEKEKIEPTEEELEAQLSVIAEQTRQDLEKVAQLYKTNERAKDNLMAQM 411
Query: 417 FEDKVIDHILKSVQIVDRK 435
EDK + IL ++ +
Sbjct: 412 REDKAVKFILDRAKVTEVP 430
>gi|332975181|gb|EGK12081.1| trigger factor [Kingella kingae ATCC 23330]
Length = 431
Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats.
Identities = 97/438 (22%), Positives = 219/438 (50%), Gaps = 15/438 (3%)
Query: 8 SEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETI 67
+E L+R++ V + + +++++ + +A + GFRPGK PL I S+YG SI ++ +
Sbjct: 4 TESLERKVTVSLSWLDINAETDKKLKQTQRRARVDGFRPGKAPLKMIASMYGASIQNDVL 63
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
+++ + ++ +++ R A I E + E + + ++ Y+ P I+++
Sbjct: 64 NDLAQAQFNKVAQEQNLRIAAVTGIEPVENQ--------EKSDEFQVVFVYETYPDIQVA 115
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
L++ + + EV +KE+D + + K + E E++ GD+V +D+ +D V +
Sbjct: 116 DLSALEIEKAVAEVGDKEVDNTIEILRKQRTRYNRVEREAQNGDRVIIDFEGKIDGVAFD 175
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
S KN F++G + E ++GLK G+ K++E FP D+ KD+AGK ++
Sbjct: 176 GGSSKNYPFVLGQGQMLPEFENGVLGLKEGESKDVEVSFPADYHGKDVAGKTAVFTITVH 235
Query: 248 EVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
V + V+ A LG MR + + + + V + ++ + +
Sbjct: 236 NVAAAELPEVDEQFAKALGIADGDVAKMREEVKKNVGREVKRRVAAQNTDAVMKALREAH 295
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLG 365
+F +P++ V++E + ++++ + + + + + ++ A+ RV G++L
Sbjct: 296 SFALPQTFVKDEAQRLAEEMKQNFAQQGLDTASFNLPADMFIE----RAEERVALGLLLP 351
Query: 366 TIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHI 425
I E+NN++ TEE++++ + + + ++++D + P+ LA + E V+D +
Sbjct: 352 VIIEQNNLKATEEQIKTLVAEFADSY-EDPQEVIDWYFADPSRLAGVTNLAVEANVVDFV 410
Query: 426 LKSVQIVDRKVTFDQLFD 443
L ++ ++ V+FD++
Sbjct: 411 LSKAKVTEKTVSFDEVMA 428
>gi|285017387|ref|YP_003375098.1| trigger factor (tf) protein [Xanthomonas albilineans GPE PC73]
gi|283472605|emb|CBA15110.1| probable trigger factor (tf) protein [Xanthomonas albilineans]
Length = 431
Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats.
Identities = 93/447 (20%), Positives = 203/447 (45%), Gaps = 19/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ A IKGFRPGK+P I+ +G
Sbjct: 1 MQASIETTGTLERRLTFTLPEERLQSHVGGRLREVARTARIKGFRPGKIPAKVIEQRFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I +E +D +++E + + R A P I L+ ++++
Sbjct: 61 QIRAEALDGLLRETFDSAVREHALRLAGNPRID------------RADDNALQFVATFEV 108
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P LQV + EV + +I + + + ++ ++ GD VT++
Sbjct: 109 VPDFGDIDVSALQVIRHTAEVTDADIAQMIENLRLQRRTWQPAGRAAQDGDLVTLETWSQ 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V + L + + ++GS +F + L+GL ++K +E FP D + AGK+V
Sbjct: 169 VGDERLPAEGVEKGSSVIGSGVMFPAIEQGLLGLSKDEEKTLEVDFPADWRVPQFAGKRV 228
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV +P+ V+ + G + R +++ + + +++R++
Sbjct: 229 QVHVKAVEVAAPVLPEVDKEFIKSFGVKSGDPEQFRKDIRVNLERELKGALMNRLRREVG 288
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ + ++P LVENE +L + +M A + + + ++ + A++R
Sbjct: 289 EQLIAAYASVEMPPRLVENEARAMLAEQVEQMRRAGR---DPGQVPDDAHHGFLDAARKR 345
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + + L + +++++ ++ P + L++ +
Sbjct: 346 VLVGLLVGEVARRNELRLDPKRVSETLRLIASTY-EEPEQVIEMYRNDPQLMGGLQSRVM 404
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDN 444
E++VID I + Q ++ +TF +
Sbjct: 405 EEQVIDWIAERAQHTEQAMTFQEAIRQ 431
>gi|322418658|ref|YP_004197881.1| trigger factor [Geobacter sp. M18]
gi|320125045|gb|ADW12605.1| trigger factor [Geobacter sp. M18]
Length = 435
Score = 229 bits (583), Expect = 7e-58, Method: Composition-based stats.
Identities = 98/439 (22%), Positives = 208/439 (47%), Gaps = 13/439 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ + +K++L+ IP+++++ ++ +IR A IKGFR GKVP++ I+ YG+
Sbjct: 1 MQISVESVNSIKKKLNFEIPADKVSAEVDKAYAEIRKHAAIKGFRKGKVPMNLIEKHYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + ++ + +S++ P I ++ ++ K + ++
Sbjct: 61 KMAEDVVKSLVSDTYFNAVSEKGLNPVGYPVIESDQ---------LKKGEPFKYSATVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
P++E+ + L+V ++ E+D +D ++ E+ + + + +GD VT D+
Sbjct: 112 FPEVELKEYLGLEVVKEKLELDASVVDARLKEMQERMAQLAPAAEGHAAAMGDFVTFDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V E + ++ Q +GS E +VGL G I+ FPE + +LAGK
Sbjct: 172 GSIDGVPFEGGASEDFQLELGSGRFIPGFEEQMVGLTVGANTTIKVTFPEGYGSAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL--GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++KE+ S V+++D A FE+ ++ ++ + E + ++ +
Sbjct: 232 PADFEITVKEIKSKELPVLDDDFAKEFGEEFETLDLLKAKLAEISQAQEESRINHDLRER 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ + K +VPE+LV+ + +L + ++S + + D+ + A+
Sbjct: 292 VFKVLIEKNDLEVPETLVDRQVQMMLDSTKHRLASQRMSLEMMGMTDDSYKVQFRDQARD 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V +++ + EK +IEVTEEE Q+ L Q + +K+ ++ A L A +
Sbjct: 352 QVKGSVIVDAVAEKESIEVTEEEFQAQLGQISAQTGQPLEKVAQTYKSNERAKDSLMAQM 411
Query: 417 FEDKVIDHILKSVQIVDRK 435
EDK + I++ ++ +
Sbjct: 412 REDKAVQFIIERAKVTEVP 430
>gi|294788592|ref|ZP_06753834.1| trigger factor [Simonsiella muelleri ATCC 29453]
gi|294483469|gb|EFG31154.1| trigger factor [Simonsiella muelleri ATCC 29453]
Length = 435
Score = 229 bits (582), Expect = 9e-58, Method: Composition-based stats.
Identities = 96/445 (21%), Positives = 211/445 (47%), Gaps = 14/445 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E L+R++ V + + + F++R++ + KA I GFRPG P+ + S+YG
Sbjct: 1 MSATIEQLEHLERKIVVTLKWDDINAEFDKRLKKVAKKAKIDGFRPGHAPVKMVASMYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI ++ ++++ +E + ++ R A + + G E + +++
Sbjct: 61 SIQNDVLNDMAQEAFNNEIIEQKIRIA-------DVLRLEPVEGAAENNDIFQAAFIFEV 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP++++ L + + + V E+E+D+ + + K + E E++ GD+V +D+
Sbjct: 114 LPEVKLVDLSGLNIEKSVANVGEEEVDKTIEILRKQRTRYNRVEREAQNGDRVIIDFEGK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + +N F++G + E ++GLK G+ K++E FPED+ +D+AGK
Sbjct: 174 IDGEVFEGGTSQNYPFVLGEGQMLPEFEAGVIGLKEGESKDVEVNFPEDYHGQDVAGKTA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
N ++K V + V+ A LG + MR + + + + V + ++
Sbjct: 234 VFNITVKNVAAAELPEVDEQFARALGISDGDINKMREEVKKNVGREVKRRVDAQNVEAVM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + FD+P SLV E + ++++ +Q++ + + A RV
Sbjct: 294 TALREAHEFDLPNSLVNEEAGRLAEEMKQNFVQQGLDAQDMQLPIDMFKE----RAAERV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + E+N ++ TEE+++ + + + ++++D + L E
Sbjct: 350 KVGLILPVLVEENKLQPTEEQVKKIINEFAESY-EDPQEVIDWYFADRQRLQGPMNLALE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
V+D +L ++ ++ ++FD +
Sbjct: 409 ANVVDFVLSKAKVTEKTLSFDDVMA 433
>gi|326382825|ref|ZP_08204515.1| trigger factor [Gordonia neofelifaecis NRRL B-59395]
gi|326198415|gb|EGD55599.1| trigger factor [Gordonia neofelifaecis NRRL B-59395]
Length = 454
Score = 229 bits (582), Expect = 9e-58, Method: Composition-based stats.
Identities = 87/468 (18%), Positives = 195/468 (41%), Gaps = 23/468 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L+V +P L+ F+ + + + I GFRPGK P I++ G+
Sbjct: 1 MKSTVEQLSPTRVKLNVEVPFEELSGDFDRAYKSLAQQIRIPGFRPGKAPAKLIEARVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL + +++ + + +++ D +A +P I + + +K D
Sbjct: 61 QAILEQVVNDAVPAKYSQAVTEADIKAISQPEIDL---------ADLVYGEPVKFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ + + V D EV E +++ ++ + E GD V++D +
Sbjct: 112 VRPEIELPEYATIAVEVDPIEVAEADVEEELDNLRARFGTLVGVERGVTGGDFVSLDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+V +ED S + + VGS L E L G+K GD F D AG+
Sbjct: 172 TVGGETVEDASTEGLSHEVGSDTLIEGLDEALEGVKAGDT----ATFTSKLVAGDHAGED 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V ++++ A + F++ + +R ++ ++ ++ +L
Sbjct: 228 AEITAKVNSVKVRELPELDDEFAQMASEFDTVAELRDSVRDRVADSKKYEQAGAIRDAVL 287
Query: 299 DYISNKYTFDVPESLV----ENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
D + + F +PES+V E + ++ + + + ++ + EE A
Sbjct: 288 DQLLDTVEFPLPESVVADEVEAVQHQLVHALGHDDAQVDRFLEAQGKTREEWDAESKTDA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V T ++L I + +EV ++E+ + Q R+ ++ + + N + L A
Sbjct: 348 EKSVRTQLLLDAIADATEVEVAQDELTQQILMQSQRYGIAPQEFIQQL-QNANQIGALYA 406
Query: 415 PIFEDKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSK 459
+ +K + ++ V++ D + F ++ ++ E +
Sbjct: 407 DVRRNKALAEVIGEVKVTDTNGETIDTKAFFGSADDAEGEDDAEGDDA 454
>gi|117926917|ref|YP_867534.1| trigger factor [Magnetococcus sp. MC-1]
gi|166229898|sp|A0LDT5|TIG_MAGSM RecName: Full=Trigger factor; Short=TF
gi|117610673|gb|ABK46128.1| trigger factor [Magnetococcus sp. MC-1]
Length = 442
Score = 229 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 87/449 (19%), Positives = 206/449 (45%), Gaps = 14/449 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + R++ + + + ++ ++ + ++ + GFR GKVP I+ +G
Sbjct: 1 MEVNVVENGLFDRDITITVAAEKVDALLSQEMTKTAAQVRLPGFRAGKVPTKMIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI +E +++ ++ P L ++ R +P + + E +E I
Sbjct: 61 SIRAEVAEQLFRDSYPTALMEKGLRPVGQPELDLVE---------LEKGKPFTYTAKIQI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
P IE + + +T+ + + + +++ + + + N + + + GD++T D+
Sbjct: 112 FPVIEPKDYTGMSLTKPVVTIQDSDVETVITRVREANAEYRTQEGVAAASGDRMTFDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD E ++ +GS + L+G K GD E++ FPED+ LAGK+
Sbjct: 172 FVDGEAFEGGKAEDYVLELGSNRFIPGFEDQLIGAKGGDALEVKVTFPEDYHGTQLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+K + S V+ +LA + G + AM+ +++ + ++ + +Q++K+Q+
Sbjct: 232 AIFKCVVKAIESRELPEVDEELAKKAGVQEGGVEAMKQEIHERLVKEADKVAKQEMKQQV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ ++P +V++E ++ + E S + + DE Y AK R
Sbjct: 292 FKLLLENNPNELPSQMVDHEIEQMVATAKEEYSRQGVDPEQLGFTDETWRNQYAEKAKER 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF--PGHEKKMLDHFQKYPNALAELRAP 415
++ G+++G+I K N+E+ ++ +++ + + +F + +++ +K L E R
Sbjct: 352 IILGLLMGSIVSKENLEIDDQAVEAHIDALVQQFAAGDYAEQLKAQLKKDKARLEEFRGA 411
Query: 416 IFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
E+K + +++ + + + +F++L
Sbjct: 412 ALEEKTVAWLIEQGTVTEEEKSFEELVAQ 440
>gi|66769568|ref|YP_244330.1| trigger factor [Xanthomonas campestris pv. campestris str. 8004]
gi|81304477|sp|Q4URL3|TIG_XANC8 RecName: Full=Trigger factor; Short=TF
gi|66574900|gb|AAY50310.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
campestris str. 8004]
Length = 430
Score = 229 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 94/445 (21%), Positives = 200/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGESDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P +L V + EV + +ID+ + + + E +++GD V ++
Sbjct: 108 VPDFGDIDVTNLSVVRHTAEVTDADIDQMIENLRLQRRTWNPVERGAQVGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N L + + ++GS +F + + L GL G+ K + FP D + LAGK V
Sbjct: 168 AGNERLPAEGVETGSSVLGSGVMFDQIEKGLEGLSKGEDKALSIDFPADWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ VN + G + R +++ + + +++R++
Sbjct: 228 QVHVKAVEVSEPVLPEVNKEFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + +M + + N I + Q + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVENEARSMLAQQVDQMRRSGR---NPGEIPADAHQGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + + L + +++++ ++ P ++ L++ +
Sbjct: 345 VLVGLLVGEVARRNELRLESKRVSETLRLIASTY-EEPEQVIEMYRNDPQLMSGLQSRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + + ++ ++F
Sbjct: 404 EEQVIDWIAERAKHTEQSLSFQDAI 428
>gi|21230438|ref|NP_636355.1| trigger factor [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|23822226|sp|Q8PBY7|TIG_XANCP RecName: Full=Trigger factor; Short=TF
gi|21112000|gb|AAM40279.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 430
Score = 229 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 94/445 (21%), Positives = 200/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGESDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P +L V + EV + +ID+ + + + E +++GD V ++
Sbjct: 108 VPDFGDIDVTNLSVVRHTAEVTDADIDQMIENLRLQRRTWNPVERGAQVGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N L + + ++GS +F + + L GL G+ K + FP D + LAGK V
Sbjct: 168 AGNERLPAEGVETGSSVLGSGVMFDQIEKGLEGLSKGEDKALSIDFPADWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ VN + G + R +++ + + +++R++
Sbjct: 228 QVHVKAVEVSEPVLPEVNKEFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + +M + + N I + Q + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVENEAGSMLAQQVDQMRRSGR---NPGEIPADAHQGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + + L + +++++ ++ P ++ L++ +
Sbjct: 345 VLVGLLVGEVARRNELRLESKRVSETLRLIASTY-EEPEQVIEMYRNDPQLMSGLQSRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + + ++ ++F
Sbjct: 404 EEQVIDWIAERAKHTEQSLSFQDAI 428
>gi|270156952|ref|ZP_06185609.1| trigger factor [Legionella longbeachae D-4968]
gi|289164624|ref|YP_003454762.1| peptidyl-prolyl cis-trans isomerase (trigger factor) [Legionella
longbeachae NSW150]
gi|269988977|gb|EEZ95231.1| trigger factor [Legionella longbeachae D-4968]
gi|288857797|emb|CBJ11641.1| peptidyl-prolyl cis-trans isomerase (trigger factor) [Legionella
longbeachae NSW150]
Length = 446
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 96/458 (20%), Positives = 212/458 (46%), Gaps = 14/458 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +GL+R++ V +PS ++ + + R++++ K I GFRPGKVPL + + Y
Sbjct: 1 MQVSVETLKGLERKVTVSVPSEKVEEEVSLRLKNLARKVKIDGFRPGKVPLHVVTNRYSN 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E ++++ + E L K + A PS+ + +E D K +++I
Sbjct: 61 SVREEVARDMVQSTLYEALQKNELVPAGYPSVEPEQ---------LEKGKDFKYSATFEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P EI+ + QV EV +K++D + ++ + N ++ ++ DKV +D+T
Sbjct: 112 MPVFEIAELNQAQVELSRAEVTDKDVDHMLDKLREQNKVWDDVSRAAKKDDKVVIDFTGF 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D+ E S + + ++GS + + ++G K +I+ FP D+ K+LAGK+
Sbjct: 172 LDDKPFEGGSAEGHELVLGSGAMIPGFEDGIIGNKKEKPFDIKVTFPADYGHKELAGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
N +I +V +++ A + + A++ + + + + V + ++
Sbjct: 232 VFNITIHKVMEGKLPELDDAFAEKFNIKEGGVEALKKDIKENMTRELDRRVSMMNREKMF 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +P +L++ E + + + I + + + AKRRV
Sbjct: 292 DKLMEVNDVPLPTALIDKEIEHLKHDMYHRIFGHEHHENE--KIPDFPRELFEEQAKRRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ +K+ I ++++ + + + G + + ++ +Q +AE+ A + E
Sbjct: 350 HLGLLFSEYVKKHQIVPDKDKVNAMIEKFAGAY-ENPDELRTWYQNSKEHMAEIEALVLE 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDK 456
+ V D I + +I + +D + + S + + +
Sbjct: 409 EMVADKIAEDAKIEYQSKDYDSVMNPKSATEATEKKGE 446
>gi|91775761|ref|YP_545517.1| trigger factor [Methylobacillus flagellatus KT]
gi|118574076|sp|Q1H1G1|TIG_METFK RecName: Full=Trigger factor; Short=TF
gi|91709748|gb|ABE49676.1| trigger factor [Methylobacillus flagellatus KT]
Length = 434
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 106/447 (23%), Positives = 190/447 (42%), Gaps = 15/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + L+R + V +P L NERI + + GFRPGKVPL+ ++ YG
Sbjct: 1 MQATVETISNLERRMTVSVPVQPLESEVNERINRLARTVKMPGFRPGKVPLNIVRQQYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + ++ + + + R A P I E ++ ++++
Sbjct: 61 QVRNEVLSNAVERSFSDAVEQNKLRVAGYPHIE--------HKPYAENDPQIEYVATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I ++ + + EV E E+ + + + + FE + S+ GDK+ +
Sbjct: 113 FPEVNIGDLSKAKIERPVLEVGEAEVKKTIDVLLRQRATFEPVKRASKKGDKINISLIAY 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D+ +E + + I+G F L G K G K E +PEDH + LAGK V
Sbjct: 173 IDDQEVERTDENGLDLIIGEGGRFPAFESELSGNKAGSNKVFEIAYPEDHKPEQLAGKTV 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
R + + V + D A LG E MR + +KQ E +R K+K Q
Sbjct: 233 RYDVTFNTVEQAKLPEFDADFARSLGVEDGDVEKMREEITASLKQEVEKRIRVKLKEQAF 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +VP++ + E ++Q + + NV+ + A R
Sbjct: 293 QALLDNTALEVPKAFINAEVGRLIQSTQDNLKQRGVDLANVNLEPALFEE----QATRNA 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++L + + N++ E++++ + F ++ + L E A E
Sbjct: 349 SLRLILSELVNRENLQANAEQVRNMVNVFAQSF-ERPDDVVTWYYADTKRLDEPAALATE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
D V++ +LKS +VD+KV FD L NS
Sbjct: 408 DNVVEWVLKSANVVDKKVKFDDLMGNS 434
>gi|312140362|ref|YP_004007698.1| trigger factor protein [Rhodococcus equi 103S]
gi|325676028|ref|ZP_08155711.1| trigger factor [Rhodococcus equi ATCC 33707]
gi|311889701|emb|CBH49018.1| trigger factor protein [Rhodococcus equi 103S]
gi|325553266|gb|EGD22945.1| trigger factor [Rhodococcus equi ATCC 33707]
Length = 456
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 83/470 (17%), Positives = 203/470 (43%), Gaps = 23/470 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F++ + + + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFEELKPDFDKAYKALAQQIRLPGFRPGKAPAKLLEARVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + +++ + E +S D + +P I I + +E +L D
Sbjct: 61 GAVLEQVVNDALPARYSEAVSASDVKVIGQPEIDITK---------LEDGQELVFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + F + VT D EV E+ + Q+ + + + E E + GD V++D +
Sbjct: 112 VRPEITLPDFSTVAVTVDPIEVTEEAVAEQLLSLRQRFGTLKGVEREVQDGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + VGS L E ++G+K G+ K+ D AG++
Sbjct: 172 TVDGEAVPEATASGLSHEVGSGQLIEGLDEAIIGVKAGESKDFTSKLVAG----DFAGQE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ V +++ A + F++ + + +++ + + +++ ++L
Sbjct: 228 AVITVTVNSVKERELPEADDEFAQMASEFDTLADLEADLRERVARVRKVEQAGQIRDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHMLA 354
+ + +PE++V+ E + L + + N+ + + E+ A
Sbjct: 288 ESLLETVEVPLPEAVVKAEVDAALHDAIHGLDHSEEKLNELLEAQGTTREQFDADAKEAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+R V T ++L I + V ++E+ + Q R+ ++ + Q+ N L + A
Sbjct: 348 ERSVKTQLLLDAIADAAGTTVGQDELTERILFQAQRYGMAPEQFIQQIQQ-ANQLGAVFA 406
Query: 415 PIFEDKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVE 461
+ K + ++ + + D + ++F + ++ E D++++ +
Sbjct: 407 DVRRGKALAGVVDAATVTDTAGETIDTAEMFGTAEPAADEAEGDEAAEQK 456
>gi|222055722|ref|YP_002538084.1| trigger factor [Geobacter sp. FRC-32]
gi|254789003|sp|B9M0Y0|TIG_GEOSF RecName: Full=Trigger factor; Short=TF
gi|221565011|gb|ACM20983.1| trigger factor [Geobacter sp. FRC-32]
Length = 435
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 104/438 (23%), Positives = 207/438 (47%), Gaps = 12/438 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ + +K++++ IP+ R+ + ++IR A IKGFR GKVP IK Y +
Sbjct: 1 MQISVESLSSVKKKINFEIPAARVASEVEKVYDEIRKHAAIKGFRKGKVPKDIIKKHYHE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + I+ + + L+ P I +E ++ + K + ++
Sbjct: 61 KMADDVLKNIVNDTYFKALTDEKIYPVSYPVIDSDE---------LKVGENFKYSATVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P +E+ +D L+V ++ ++++ + ++ E+ +N E E ++ GD VT D+
Sbjct: 112 FPDVEVKDYDGLEVKKEKFVLNDEVVTGRLREMQENMAHLEPAEAGVAAKSGDYVTFDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + + + Q +GS + LVG+K+GD+ EI+ FPE++ KDLAGK
Sbjct: 172 GSIDGVPFDGGAADDFQLELGSGRFIPGFEDQLVGMKSGDESEIKVTFPENYGQKDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
IKE+ +N+D A FE+ ++ ++ + ++ ++
Sbjct: 232 DASFTVKIKEIKVKELPELNDDFAKDFGEFETLEDLKKKIAEVHNLQENERIEADLRDRL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + K +F+VPE+LV+ + N +L+ + ++ + + DE + A+ +
Sbjct: 292 IKALIEKNSFEVPETLVDKQLNLMLENSKRRLAMQRLTIEMMGLNDEGYKAQFRSAAETQ 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V I+L + K +IEVT E+ L Q + +++ +Q+ A L A +
Sbjct: 352 VKGSILLDALARKESIEVTAAEVDEKLEQIAQQNNQDLEQVNKFYQQNAQAKENLSAQLK 411
Query: 418 EDKVIDHILKSVQIVDRK 435
EDK I+ +L + + +
Sbjct: 412 EDKAIELLLSKATVTEVE 429
>gi|197117659|ref|YP_002138086.1| FKBP-type peptidylprolyl cis-trans isomerase (trigger factor)
[Geobacter bemidjiensis Bem]
gi|226738681|sp|B5EI26|TIG_GEOBB RecName: Full=Trigger factor; Short=TF
gi|197087019|gb|ACH38290.1| peptidylprolyl cis-trans isomerase, FKBP-type (trigger factor)
[Geobacter bemidjiensis Bem]
Length = 435
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 99/439 (22%), Positives = 204/439 (46%), Gaps = 13/439 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ + +K++L+ IP+++++ ++ +IR A IKGFR GKVP+S I+ YG+
Sbjct: 1 MQISVESVNSIKKKLNFEIPADKVSAEVDKAYAEIRKHAAIKGFRKGKVPMSLIEKHYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + +++E +S++ P+I S ++ K + ++
Sbjct: 61 KMAEDVVKNLVQESYFSAVSEQGLNPVGYPAIE---------SNPLKKGESFKYSATVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
P++E+ + L V ++ E+D+ + ++ E+ + + + +GD VT D+
Sbjct: 112 FPEVEVKDYTGLAVVKEKLEIDDSVVAARLKEMQERMSQLGPAPEGHAAAMGDFVTFDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D V E S ++ Q +GS E +VG+ G I+ FPE + DLAGK
Sbjct: 172 GAMDGVYFEGGSAEDFQLELGSGRFIPGFEEQMVGMTVGTNSTIKVNFPEGYGNADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL--GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
SIKE+ +N+D A FE+ ++ ++ + + +++ +
Sbjct: 232 PADFEVSIKEIKVKELPELNDDFAKEFGEEFETLDLLKAKLAEMNEAQEVSRINAELRDR 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++ + K +VPE+LV+ + +L+ + ++S + + D+ + A+
Sbjct: 292 LIKALIEKNELEVPEALVDRQAQMMLESTKQRLASQRLSLEMMGMTDDSYKAQFRDNARE 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V ++L + EK IE TEEE ++ L + +K+ ++ A L A +
Sbjct: 352 QVKGSLLLDAVAEKEKIEPTEEEFEAQLSVIAEQTRQDLEKVTQLYKTNERAKDNLMAQM 411
Query: 417 FEDKVIDHILKSVQIVDRK 435
EDK + IL ++ +
Sbjct: 412 REDKAVQFILDRAKVTEVP 430
>gi|56460114|ref|YP_155395.1| trigger factor [Idiomarina loihiensis L2TR]
gi|67461666|sp|Q5QXN7|TIG_IDILO RecName: Full=Trigger factor; Short=TF
gi|56179124|gb|AAV81846.1| Trigger factor [Idiomarina loihiensis L2TR]
Length = 433
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 92/449 (20%), Positives = 219/449 (48%), Gaps = 18/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R + V +P++ + +++ + GFR GK+P + ++ L+G+
Sbjct: 1 MQVSVETTQGLERRVTVTVPADTIDSEVKRLLKEEYRHRRVNGFRKGKIPPNVLQKLFGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S I++ E + + A P+I + E DL+ ++++
Sbjct: 61 EARSRAASSIMQSKYFEAVMQEKLNPAGAPAIEPK---------VNEPGKDLEFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ + D ++V + EV EK++D + + K + ++ + +S+ GD+VT+D+ S
Sbjct: 112 YPEVEVQNLDKVKVEKPAVEVTEKDVDNMLETLQKQHADWKEVKRKSKKGDRVTMDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + +G + + + G+K G++K IE FPED+ ++L GK+
Sbjct: 172 IDGEEFEGGKADDFALELGEGRMIPGFEDQIKGIKAGEEKTIEVTFPEDYHAENLKGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + K+V + +N++ G + A++ + +++ + V+ KVK Q+L
Sbjct: 232 QFVVTAKKVEARDLPELNDEFVALFGVKEGGVEALKEEVRKNMERELKNAVKAKVKEQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
I ++P+S+++ E + + ++ NV+ + + + + AK RV
Sbjct: 292 KGIVENNDVELPKSMIDQEIDQLRKQAAQRFGG------NVEQMPDLPAELFEEQAKERV 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++LG + N ++ +E++ + ++++++++ + + ++R E
Sbjct: 346 KVGLLLGEVIRGNELKADDEKVD-EIIATAASAYEDPQEVVEYYKSNNDMMQQVRNLALE 404
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ I+ +L+ + D+K +FD + + +
Sbjct: 405 EQAIEFVLEKASVKDKKASFDDIMNPKQQ 433
>gi|319947982|ref|ZP_08022159.1| trigger factor [Dietzia cinnamea P4]
gi|319438328|gb|EFV93271.1| trigger factor [Dietzia cinnamea P4]
Length = 465
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 92/475 (19%), Positives = 203/475 (42%), Gaps = 23/475 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++ V +P L F + + + + NI GFRPGK P ++S G+
Sbjct: 1 MKSTVEQLNPTRVKITVEVPFAELEPDFAKAYKSLAGQVNIPGFRPGKAPAKLLESRIGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + I+++I + + + + +P I + + +E ++ D
Sbjct: 61 PAVLEQVINDMIPARYSQAVDEHELVVLAQPEIEVTK---------LEDNDVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + F+DL+VT + E D+ +D ++ + + E + GD ++VD
Sbjct: 112 VRPEITLPKFEDLEVTVEAPETDDAAVDAELDNLRARFGTLKGVERGATKGDFLSVDLAA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD +ED S + + + +GS L E GLK G+ KE + AGK+
Sbjct: 172 TVDGEPVEDASTEGLSYELGSGTLIEGLDEAAEGLKAGESKEFTSSLVAG----EHAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V +++ A + F++ +R ++K+ Q ++ + +++ ++L
Sbjct: 228 AVITVTVQSVKERELPEADDEFAQMASEFDTLEELRADLTEKVAQQAKAGLAGEIRDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQ----KVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
D + P++LVE E + L + N + E
Sbjct: 288 DALLEATDVPTPDALVEAEAHQQLHSIFGDAAHDDDMINSMLAAEGTDRETFDAETLEAT 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
R + + ++L + E+ + +V++EE+ + Q R+ + + Q+ L L +
Sbjct: 348 ARAIRSQLLLDAVAEEASTDVSQEELTQHILFQAQRYGMDPNQFVQQIQQT-GQLGSLFS 406
Query: 415 PIFEDKVIDHILKSVQIVDRK---VTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
+ K + +++ V + D + V + F ++S E D+++ E
Sbjct: 407 DVRRSKALADVIQQVTVKDAEGNVVDTSEFFGTREDASDEDAADEATDSADESRE 461
>gi|257055261|ref|YP_003133093.1| trigger factor [Saccharomonospora viridis DSM 43017]
gi|256585133|gb|ACU96266.1| trigger factor [Saccharomonospora viridis DSM 43017]
Length = 479
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 97/480 (20%), Positives = 202/480 (42%), Gaps = 26/480 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +++V +P + L +F+ I + I GFRPGK P ++S G+
Sbjct: 1 MKSTVEQLSPTRVKINVEVPFDELKPNFDRAYRKIAQQVRIPGFRPGKAPARVLESRIGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ +L E I+E I E + + R +P + + +E L+ D
Sbjct: 61 APVLDEVINEAIPAKYLEAVRSSEVRTLGQPEFEVTK---------LEDREVLEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + DDL V+ D E+DE E+D Q+ ++ + + +E GD V++D +
Sbjct: 112 VRPEITLPDLDDLTVSVDDVELDESEVDEQLDQLRARFGVLKGVDRPAENGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + D S + + +GS L E ++G G+ K + AGK
Sbjct: 172 TVDGEEVPDASTTGLSYEIGSGQLVEGIDEAIIGANEGETKTFTTKLVAG----EHAGKD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + +++ A F++ ++ +++ + + + ++L
Sbjct: 228 AEVTVKVNSIKERELPEADDEFAQLASEFDTLDELKADLRERLLRMKRVQQGVQARDKVL 287
Query: 299 DYISNKYTFDVPESLVE----NEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+ + N+ VPE ++E N + + + + + + EE + A
Sbjct: 288 EELLNRVEVPVPEKVLEAEIANRKHDAIHPFDHDEEAFKRSLEAQGGNPEEWEKEVREEA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+R V T ++L I + ++ V++ E+ + Q RF + + + Q+ L + A
Sbjct: 348 ERSVRTQLLLDAIADARDVSVSDSELTERIIYQAQRFGMNPDEYVQRAQE-AGQLGAIYA 406
Query: 415 PIFEDKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ K + +++ V + D + + +LF +SS S+ E S+E SE
Sbjct: 407 DVRRGKALAGVVREVTVTDASGQTLDLSELFGTGDDSSQ---AADSASNEDTASDEGSSE 463
>gi|94310824|ref|YP_584034.1| trigger factor [Cupriavidus metallidurans CH34]
gi|118574082|sp|Q1LM61|TIG_RALME RecName: Full=Trigger factor; Short=TF
gi|93354676|gb|ABF08765.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Cupriavidus
metallidurans CH34]
Length = 449
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 92/461 (19%), Positives = 202/461 (43%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ + IP + ER+ + + GFRPGKVP+ ++ YG+
Sbjct: 1 MSNVIENLGKLDRKVTLAIPKAEVQKETQERLARLSKTVKMSGFRPGKVPMKMVEKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + +I ++ + A +P I +L ++++
Sbjct: 61 QVEFEVRFDKAARKFFDITQAQEVKVAGQPKFDIKTEGV--------ADDELAFEATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-----------ESEI 169
P+++I +VT+ E+ + EID+ + + K V F + ++
Sbjct: 113 YPEVKIGDLASAEVTRTKTEIGDAEIDKTVDILRKQRVHFHARGDAGAHGDGGADVAAQN 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VT+D+ +D V ++ +++G + E +GLK G+ K FP D
Sbjct: 173 GDRVTLDFVGKIDGVEFAGGKAEDFVYVLGEGRMLPEFETATLGLKVGESKSFPLTFPAD 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEF 287
+ K++AGK ++K+V V++ A LG MR + +++ +
Sbjct: 233 YHGKEVAGKTAEFTVTLKKVEWAHLPEVDDAFAKSLGIADGSVEKMRADIRENLEREVKR 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+K Q+++ + DVP++LVE + +++ R ++ +
Sbjct: 293 RTHSMLKDQVMEALLKVSELDVPKALVEQDQERLVEMARRDLEQRGMPNA---KDMPIPA 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G++L I + N +E +++++ + + K+++ +
Sbjct: 350 EMFTQQAERRVKLGLILAEIVKANGLEAKPDQIKAEIEDFAKSY-EDPKEVMRWYYGDQQ 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
LAE+ A + E+ V++ + ++ D+ V+F++L +++
Sbjct: 409 RLAEMEAYVLENNVVNFVCDKAKVADKTVSFEELTAAPAQA 449
>gi|161087384|gb|ABX56853.1| trigger factor [Psychrobacter frigidicola]
Length = 447
Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats.
Identities = 94/443 (21%), Positives = 213/443 (48%), Gaps = 13/443 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
Q+ + +L V +P ++ + RI + A I GFR G VP+SHI++ YG
Sbjct: 6 QITTNKLSNKETQLTVKVPVEKIQNKVEGRIRQVAKTAKIDGFRKGNVPMSHIRAQYGAG 65
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I E I+++I++ V E + D RA P+I + E D L + + +I
Sbjct: 66 IQQEVINDVIRDTVFEAIKAEDIRAVGMPNIDDVKLEDDF----------LVYQATVEIF 115
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++++ ++++V + V+E ++D + + K F K+ +++ ++VT D+ S+
Sbjct: 116 PEVDVQGINEIEVERHTATVNEADVDTMIENLQKQREEFVEKKGKADKDNQVTFDFEGSI 175
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D + S ++ + ++GS + + + G+K G++K IE FPED+ ++LAGK +
Sbjct: 176 DGEKFDGGSSEDFKLVIGSNQMIPGFEDGIKGMKAGEEKTIEVTFPEDYQAEELAGKAAQ 235
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++K V +N++ G + ++ + +++ + R +VK+ D
Sbjct: 236 FKINVKLVEKSKLPEINDEFLELFGVKEGGVEKLKDDVRKNMEREIKNAARSQVKQATFD 295
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ K FDVP +++E E + + + + + D + + A R
Sbjct: 296 ALLEKNEFDVPSAMLEQEIDRQRSMMMQRFAQQFGSNADSFDKDMLPNELFEEQALRAAR 355
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
GI++ + + +EV ++ +++ + + + ++++++ A + + + ED
Sbjct: 356 LGIIVARVIDTKGLEVDQDRVEAFIKESSENY-EDPAEVIEYYTNDKQQRANIESVVLED 414
Query: 420 KVIDHILKSVQIVDRKVTFDQLF 442
+V+D++++ + D++V++ L
Sbjct: 415 QVVDYLIEQGTVTDKEVSYQDLL 437
>gi|113867495|ref|YP_725984.1| trigger factor [Ralstonia eutropha H16]
gi|123329314|sp|Q0KBK5|TIG_RALEH RecName: Full=Trigger factor; Short=TF
gi|113526271|emb|CAJ92616.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Ralstonia eutropha H16]
Length = 451
Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats.
Identities = 92/463 (19%), Positives = 203/463 (43%), Gaps = 25/463 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ + IP + ER+ + + GFRPGKVP+ ++ YG+
Sbjct: 1 MSNVIENLGKLDRKVTLAIPKAEVEKEKQERLVRLSKTVKMSGFRPGKVPMKMVEKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + +I ++D + A +P I G ++ ++++
Sbjct: 61 QVEFEVRFDKAARKFFDITKEQDVKVAGQPKFEIKNEGV--------GEDEVAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++ I +VT+ E+ + E+D+ + + K V + + E
Sbjct: 113 YPEVTIGDLSAAEVTRTGTEITDAEVDKTIDILRKQRVHYHARGEAGEHGDGGADVAAQN 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VT+D+ +D ++ F++G + E + +GLK G+ K FPED
Sbjct: 173 GDRVTLDFVGKIDGEEFAGGKAEDFPFVLGEGRMLPEFEQAALGLKVGESKTFPLAFPED 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEF 287
+ K++AGK ++K++ VN+ A LG MR + +++ +
Sbjct: 233 YHGKEVAGKTAEFTVTLKKIEWAHLPEVNDAFAKSLGIADGSVEKMRADIRENLEREVKR 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+K Q+++ + +VP++L+E + +++ R ++ +
Sbjct: 293 RTHSMLKDQVMEALLKASELEVPKALIEQDQERLVEMARRDLEQRGMPNA---KDMPIPA 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G++L I + N +E +++++ + + K+++ +
Sbjct: 350 EMFAQQAERRVKLGLILAEIVKANGLEAKADQIKAEIEDFAKSY-EDPKEVMRWYYGDQQ 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
LAE+ A + E+ V++ + ++ D+KV+F++L ++
Sbjct: 409 RLAEMEAYVLENNVVNFVCGKAKVTDKKVSFEELTAEGNQQQA 451
>gi|254499145|ref|ZP_05111833.1| trigger factor [Legionella drancourtii LLAP12]
gi|254351634|gb|EET10481.1| trigger factor [Legionella drancourtii LLAP12]
Length = 448
Score = 227 bits (577), Expect = 3e-57, Method: Composition-based stats.
Identities = 91/452 (20%), Positives = 202/452 (44%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +GL+R++ + +P+ ++ + + R++ + K + GFRPGKVP+ + S Y
Sbjct: 1 MQVSVETLKGLERKVTISVPTAKVEEEVSSRLKGLAQKVKVDGFRPGKVPMHVVTSRYSD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E ++++ + E L + + A P + + E D D K ++++
Sbjct: 61 SVREEVARDMVQSTLFEALQQHELVPAGYPYVEPEQVEKD---------KDFKYTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P E+ + V EV +K++ M ++ + N + + GDKV +D+
Sbjct: 112 MPVFEVVELNQAVVELAKSEVTDKDVQEMMDKLREQNKEWHDVSRAVKSGDKVVIDFQGF 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D+ + S + + ++GS + + ++G K +I+ FPED+ K+LAGK+
Sbjct: 172 LDDKAFDGGSAEGHELVIGSGSMIPGFEDGIIGGKKDKPFDIKVNFPEDYGHKELAGKEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+I+ V +++ A + + A++ + + E V + ++
Sbjct: 232 IFKITIRNVLEGKLPELDDVFAEKFNIKEGGVEALKTDIKDNMTRELERRVSMMNREKLF 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + D+P +L++ E + + + I + + + AKRRV
Sbjct: 292 DKLMEVNIIDLPLALIDKEIEHLKHDMYHRLFGHEHHENE--QIPDFPRELFEEQAKRRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++ +K+ I +E++ + + + G + + ++ ++ LAE+ A + E
Sbjct: 350 HLGLLFSEYVKKHQIVADKEKVDAMIEKFAGAY-ENPDELRAWYRSSKEHLAEIEALVME 408
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
+ V D I +I + +D + + E+
Sbjct: 409 EMVADKIAADAKIKHKSTDYDSVMNPKKETEK 440
>gi|194289503|ref|YP_002005410.1| trigger factor [Cupriavidus taiwanensis LMG 19424]
gi|238692760|sp|B3R4W0|TIG_CUPTR RecName: Full=Trigger factor; Short=TF
gi|193223338|emb|CAQ69343.1| peptidyl-prolyl cis/trans isomerase (trigger factor), molecular
chaperone involved in cell division [Cupriavidus
taiwanensis LMG 19424]
Length = 451
Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats.
Identities = 95/463 (20%), Positives = 201/463 (43%), Gaps = 25/463 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ + IP + ER+ + + GFRPGKVP+ ++ YG+
Sbjct: 1 MSNVIENLGKLDRKVTLAIPKAEVEKEKQERLVRLSKTVKMSGFRPGKVPMKMVEKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + +I ++D + A +P I G ++ ++++
Sbjct: 61 QVEFEVRFDKAARKFFDITKEQDVKVAGQPKFEIKNEGV--------GEDEVAFDATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
P++ I +VT+ E+ + E+D+ + + K V + + E
Sbjct: 113 YPEVTIGDLSAAEVTRTSTEITDAEVDKTIDILRKQRVHYHARGESGEHGDGGADVTAQN 172
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+VTVD+ +D V ++ F++G + E + +GLK G+ K FP D
Sbjct: 173 GDRVTVDFVGKIDGVEFAGGKAEDFPFVLGEGRMLPEFEQATLGLKVGESKTFPLAFPAD 232
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEF 287
+ K++AGK ++K+V VN A LG MR + +++ +
Sbjct: 233 YHGKEVAGKTAEFTVTLKKVEWAHLPEVNEAFAKSLGIADGSVEKMRADIRENLEREVKR 292
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+K Q+++ + DVP++L+E + +++ R ++ +
Sbjct: 293 RTHAMLKDQVMEALLKASELDVPKALIEQDQERLVEMARRDLEQRGMPNA---KDMPIPA 349
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+RRV G++L I + N +E +++++ + + K+++ +
Sbjct: 350 EMFAQQAERRVKLGLILAEIVKANGLEAKADQIKAEIEDFAKSY-EDPKEVMRWYYGDQQ 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
LAE+ A + E+ V++ + ++ D+KV+F++L +
Sbjct: 409 RLAEMEAYVLENNVVNFVCDKAKVTDKKVSFEELTAEGNAQQA 451
>gi|166710927|ref|ZP_02242134.1| trigger factor [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 430
Score = 227 bits (577), Expect = 4e-57, Method: Composition-based stats.
Identities = 90/445 (20%), Positives = 195/445 (43%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGETDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + EV + +ID+ + + + E +++GD V ++
Sbjct: 108 VPDFGDIDVTTLSVVRATAEVTDADIDQMIENLRLQRRTWNPVERGAQVGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + ++GS +F + + L GL GD+K + FP + + LAGK V
Sbjct: 168 AGDERLPADGVETGSSVLGSGVMFDQIEKGLEGLTKGDEKTLSVDFPAEWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ V+ G + R +++ + + +++R++
Sbjct: 228 QVHVKAVEVSEPVLPAVDKAFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + ++ + + + + + Q + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVENEARSMLAQQVEQVRRSGR---DPGQVPADAHQGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + L + +++++ ++ P + L+ +
Sbjct: 345 VLVGLLVGEVARRNELRLESRRVSETLRLIASTY-EEPEQVIEMYRNDPQLMNGLQNRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + Q ++ ++F
Sbjct: 404 EEQVIDWIAERAQHTEQSLSFQDAI 428
>gi|93007057|ref|YP_581494.1| trigger factor [Psychrobacter cryohalolentis K5]
gi|119370923|sp|Q1Q8J3|TIG_PSYCK RecName: Full=Trigger factor; Short=TF
gi|92394735|gb|ABE76010.1| trigger factor [Psychrobacter cryohalolentis K5]
Length = 447
Score = 226 bits (576), Expect = 4e-57, Method: Composition-based stats.
Identities = 98/443 (22%), Positives = 213/443 (48%), Gaps = 13/443 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
QV + +L V +P ++ + RI + A I GFR G VP+SHI+S YG
Sbjct: 6 QVTTNKLSNKETQLTVKVPVEKIQNKVEGRIRQVAKTAKIDGFRKGNVPMSHIRSQYGAG 65
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I E I+++I++ V E + D RA P+I + E D L + + +I
Sbjct: 66 IQQEVINDVIRDTVFEAIKSEDIRAVGMPNIDDVKLEDDF----------LVYQATVEIF 115
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++++ ++++V + +VDE ++D + + K F K+ +++ G++VT D+ S+
Sbjct: 116 PEVDVQGINEIEVERHTAKVDEADVDTMIENLQKQREEFVEKKGKADKGNQVTFDFEGSI 175
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D E S ++ + ++GS + + G+K G++K I+ FPED+ ++LAGK+ +
Sbjct: 176 DGEKFEGGSAEDFKLVIGSNQMIPGFEAGIKGMKAGEEKTIDVTFPEDYQAENLAGKEAQ 235
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++K V +++ G + ++ + +++ + R +VK+ D
Sbjct: 236 FKINVKLVEKSKLPEIDDAFLELFGVKEGGVEKLKDDVRKNMEREIKNAARSQVKQATFD 295
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ K FDVP +++E E + S + + D + + A R
Sbjct: 296 ALLEKNEFDVPNAMLEQEIERQRNMMMQRFSQQFGANADSFDKDMLPNELFEEQALRAAR 355
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
GI++ + + +EV + +++ + + + ++++++ A + + + ED
Sbjct: 356 LGIIVARVIDTKGLEVDQARVETFIKEAAENY-EDPSEVIEYYTTDKQQRANIESVVLED 414
Query: 420 KVIDHILKSVQIVDRKVTFDQLF 442
+V+D++++ ++ D++V++ L
Sbjct: 415 QVVDYLIEQGKVTDKEVSYQDLL 437
>gi|294666563|ref|ZP_06731804.1| trigger factor [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292603707|gb|EFF47117.1| trigger factor [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 430
Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats.
Identities = 89/445 (20%), Positives = 199/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGETDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + EV + +ID+ + + + E +++GD V ++
Sbjct: 108 VPDFGDIDVTKLSVVRATAEVTDADIDQMIENLRLQRRTWNPVERGAQVGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + + ++GS +F + + L GL G++K + FP + + LAGK V
Sbjct: 168 AGDERLPAEGVETGSSVLGSGVMFDQIEKGLEGLTKGEEKTLTVDFPAEWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ +V P+ V+ D G + R +++ + + +++R++
Sbjct: 228 QVHVKAVDVSEPVLPAVDKDFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + ++ + + + + + Q + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVENEARSMLAQQVEQVRRSGR---DPGQVPADAHQGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + + L + +++++ ++ P + L++ +
Sbjct: 345 VLVGLLVGEVARRNELRLESKRVSETLRLIASTY-EEPEQVIEMYRNDPQLMNGLQSRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + Q ++ ++F
Sbjct: 404 EEQVIDWIAERAQHTEQSLSFQDAI 428
>gi|325914927|ref|ZP_08177259.1| trigger factor [Xanthomonas vesicatoria ATCC 35937]
gi|325538820|gb|EGD10484.1| trigger factor [Xanthomonas vesicatoria ATCC 35937]
Length = 430
Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats.
Identities = 90/445 (20%), Positives = 200/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDTAVREHSLRLAGNPRID-------------QGESDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + EV + +ID+ + + + E +++GD V ++
Sbjct: 108 VPDFGDIDVAKLSVVRHTAEVTDADIDQMIENLRLQRRTWNPVERGAQVGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + + ++GS +F + + L GL G+ K + FP + + LAGK V
Sbjct: 168 AGDERLPAEGVETGSSVLGSGVMFDQIEKGLEGLAKGEDKTLTVDFPAEWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ VV+ + G + R +++ + + +++R++
Sbjct: 228 QVHVKAVEVSEPVLPVVDKEFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + ++ + + + + ++ Q + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVENEARSMLAQQVDQVRRSGR---DPGQVPDDAYQGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + + L + +++++ ++ P + L++ +
Sbjct: 345 VLVGLLVGEVARRNELRLESKRVSETLRLIASTY-EEPEQVIEMYRNDPQLMGGLQSRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + Q ++ ++F
Sbjct: 404 EEQVIDWIAERAQHTEQPLSFQDAI 428
>gi|325922707|ref|ZP_08184447.1| trigger factor [Xanthomonas gardneri ATCC 19865]
gi|325546824|gb|EGD17938.1| trigger factor [Xanthomonas gardneri ATCC 19865]
Length = 431
Score = 226 bits (575), Expect = 6e-57, Method: Composition-based stats.
Identities = 95/447 (21%), Positives = 199/447 (44%), Gaps = 19/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ +I A IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLREIARTARIKGFRPGKVPAKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E +D +++E + + R A P I G D ++++
Sbjct: 61 QVRAEAMDGLLRETFDSAVREHALRLAGNPRID------------KAGESDFDFVATFEV 108
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + EV + +ID+ + + + E +++ D V ++
Sbjct: 109 VPDFGDIDVTTLSVVRHTAEVTDADIDQMIENLRLQRRTWNPVERGAQVNDLVALETWSQ 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + + ++GS +F + + L GL G+ K + FP + + LAGK V
Sbjct: 169 AGDERLPAEGVETGSSVLGSGVMFDQIEKGLEGLAKGEDKTLTIDFPAEWRVPQLAGKTV 228
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ VV+N+ G + R +++ + + +++R++
Sbjct: 229 QVHVKAVEVSEPVLPVVDNEFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 288
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + ++ + + N I + Q + A +R
Sbjct: 289 EQLIAAYAHVEMPPRLVENEARSMLAQQVEQVRRSGR---NPGEIPADAHQGFMDAAAKR 345
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + + L + +++++ ++ P + L++ +
Sbjct: 346 VLVGLLVGEVARRNELRLESKRVSETLRLIASTY-EEPEQVIEMYRNDPQLMGGLQSRVM 404
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDN 444
E++VID I + Q ++ ++F
Sbjct: 405 EEQVIDWIAERAQHTEQPMSFQDAIRQ 431
>gi|71066495|ref|YP_265222.1| trigger factor [Psychrobacter arcticus 273-4]
gi|119370922|sp|Q4FQC0|TIG_PSYA2 RecName: Full=Trigger factor; Short=TF
gi|71039480|gb|AAZ19788.1| probable peptidylprolyl isomerase, FKBP-type [Psychrobacter
arcticus 273-4]
Length = 447
Score = 226 bits (575), Expect = 7e-57, Method: Composition-based stats.
Identities = 100/443 (22%), Positives = 212/443 (47%), Gaps = 13/443 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
QV + +L V +P ++ + RI + A I GFR G VP+SHI+S YG
Sbjct: 6 QVTTNKLSNKETQLTVKVPVEKIQNKVEGRIRQVAKTAKIDGFRKGNVPMSHIRSQYGAG 65
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I E I+++I++ V E + D RA P+I + E D L + + +I
Sbjct: 66 IQQEVINDVIRDTVFEAIKSEDIRAVGMPNIDDVKLEDDF----------LVYQATVEIF 115
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P+I+I D+++V + V+E+++D + + K F K+ +++ G++VT D+ S+
Sbjct: 116 PEIDIQGIDEIEVERHTATVNEEDVDTMIENLQKQREEFVEKKGKADKGNQVTFDFEGSI 175
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D E S ++ + ++GS + + G+K G++K I+ FPED+ ++LAGK+ +
Sbjct: 176 DGEKFEGGSAEDFKLVIGSNQMIPGFEAGIKGMKAGEEKTIDVTFPEDYQAENLAGKEAQ 235
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++K V +++ G + ++ + +++ + R +VK+ D
Sbjct: 236 FKINVKLVEKSKLPEMDDAFLELFGVKEGGVEKLKDDVRKNMEREIKNAARSQVKQATFD 295
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ K FDVP +++E E + S + + D + + A R
Sbjct: 296 ALLEKNEFDVPNAMLEQEIERQRNMMMQRFSQQFGANADSFDKDMLPNELFEEQALRAAR 355
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
GI++ + + +EV + +++ + + + ++++++ A + + + ED
Sbjct: 356 LGIIVARVIDTKGLEVDQARVETFIKEAAENY-EDPAEVIEYYTTDKQQRANIESVVLED 414
Query: 420 KVIDHILKSVQIVDRKVTFDQLF 442
+V+D+++ ++ D++V++ L
Sbjct: 415 QVVDYLIGQGKVTDKEVSYQDLL 437
>gi|255019393|ref|ZP_05291502.1| Cell division trigger factor [Acidithiobacillus caldus ATCC 51756]
gi|254971165|gb|EET28618.1| Cell division trigger factor [Acidithiobacillus caldus ATCC 51756]
Length = 435
Score = 226 bits (574), Expect = 7e-57, Method: Composition-based stats.
Identities = 104/441 (23%), Positives = 200/441 (45%), Gaps = 29/441 (6%)
Query: 11 LKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEI 70
L+R++ + +P+ + +R+ A + GFRPGKVP + I+ +G L E D +
Sbjct: 18 LERQIQITVPAAEVDAQVTQRLRQKARSARLPGFRPGKVPPAVIQGQFGSEALMEAFDHL 77
Query: 71 IKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFD 130
I + E L R RP + +++G DL + ++ P +
Sbjct: 78 INQYYVEALRTHSLRPVARPEVQVDQGGR---------GEDLIFTATVEVYPDFTPVVPE 128
Query: 131 DLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQS 190
+ VT+ E+ + ++D + + + F + ++ GD+VTVD+ +L
Sbjct: 129 AV-VTRKTAEILDSDVDATLDIMRQQRRDFVAVDRPAQSGDRVTVDFIGRRGGEVLPGGD 187
Query: 191 KKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVF 250
+ ++GS L E + L GL+ GD+K++E FP D+ +LAG+K +K V
Sbjct: 188 VSDYGVVLGSGRLLPEIEQALEGLRAGDEKQVEVTFPADYPNPELAGQKAEFALKVKAVA 247
Query: 251 SPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFD 308
P ++ D A LG E +R + +++ ++ + R +VK QILD + +
Sbjct: 248 EPRLPELDADFARELGIEDGDVATLRREVRENLEREAQRISRVQVKAQILDLLVEANQPE 307
Query: 309 VPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIG 368
+P+ L+ E + Q+ + + E LA+RRV+ G+VL I
Sbjct: 308 LPKQLLAQERERLKQERKVQ----------------ELDSEGESLARRRVVLGLVLSEIA 351
Query: 369 EKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS 428
+ + + M L ++ + + +++ LAEL A + ED+V++ +L+
Sbjct: 352 RQQKLVASASAMDRMLRDMAEQY-EDPGQFVRWYRQDEQRLAELEAMVLEDQVVEWLLER 410
Query: 429 VQIVDRKVTFDQLFDNSSESS 449
V++ + V+F++L E +
Sbjct: 411 VKVSEVPVSFNRLIGREPEPA 431
>gi|21241837|ref|NP_641419.1| trigger factor [Xanthomonas axonopodis pv. citri str. 306]
gi|23822228|sp|Q8PNI6|TIG_XANAC RecName: Full=Trigger factor; Short=TF
gi|21107217|gb|AAM35955.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas axonopodis pv.
citri str. 306]
Length = 430
Score = 226 bits (574), Expect = 9e-57, Method: Composition-based stats.
Identities = 89/445 (20%), Positives = 199/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGETDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + EV + +ID+ + + + E +++GD V ++
Sbjct: 108 VPDFGDIDVTKLSVVRATAEVTDADIDQMIENLRLQRRTWNPVERGAQVGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + + ++GS +F + + L GL G++K + FP + + LAGK V
Sbjct: 168 AGDERLPAEGVETGSSVLGSGVMFDQIEKGLEGLTKGEEKTLTVDFPAEWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ V+ D G + R +++ + + +++R++
Sbjct: 228 QVHVKAVEVSEPVLPAVDKDFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVE+E +L + ++ + + + + + Q + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVESEARSMLAQQVEQVRRSGR---DPGQVPADAHQGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + + L + +++++ ++ P + L++ +
Sbjct: 345 VLVGLLVGEVARRNELRLESKRVSETLRLIASTY-EEPEQVIEMYRNDPQLMNGLQSRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + Q ++ ++F
Sbjct: 404 EEQVIDWIAERAQHTEQSLSFQDAI 428
>gi|294627912|ref|ZP_06706491.1| trigger factor [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292597826|gb|EFF41984.1| trigger factor [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 430
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 90/445 (20%), Positives = 199/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGETDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + EV + +ID+ + + + E +++GD V ++
Sbjct: 108 VPDFGDIDVTKLSVVRATAEVTDADIDQMIENLRLQRRTWNPVERGAQVGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + + ++GS +F + + L GL G++K + FP + + LAGK V
Sbjct: 168 AGDERLPAEGVETGSSVLGSGVMFDQIEKGLEGLTKGEEKTLTVDFPAEWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ V+ D G + R +++ + + +++R++
Sbjct: 228 QVHVKAVEVSEPVLPAVDKDFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + ++ + + + + + Q + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVENEARSMLAQQVEQVRRSGR---DPGQVPADAHQGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + + L + +++++ ++ P + L++ +
Sbjct: 345 VLVGLLVGEVARRNELRLESKRVSETLRLIASTY-EEPEQVIEMYRNDPQLMNGLQSRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + Q ++ ++F
Sbjct: 404 EEQVIDWIAERAQHTEQSLSFQDAI 428
>gi|188578372|ref|YP_001915301.1| trigger factor [Xanthomonas oryzae pv. oryzae PXO99A]
gi|67461614|sp|Q5H435|TIG_XANOR RecName: Full=Trigger factor; Short=TF
gi|238689532|sp|B2SMI4|TIG_XANOP RecName: Full=Trigger factor; Short=TF
gi|188522824|gb|ACD60769.1| trigger factor [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 430
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 89/445 (20%), Positives = 196/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGETDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + EV + +ID+ + + + E ++ GD V ++
Sbjct: 108 VPDFGDIDVTTLSVVRATAEVTDADIDQMIENLRLQRRIWNPVERGAQAGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + ++GS +F + + L GL G++K + FP + + LAGK V
Sbjct: 168 AGDERLPADGVETGSSVLGSGVMFDQIEKGLEGLTKGEEKTLSVDFPAEWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ V+ + G + R +++ + + +++R++
Sbjct: 228 QVHVKAVEVSEPVLPAVDKEFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + ++ + + + + + Q + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVENEARSMLAQQVEQVRRSGR---DPGQVPADAHQGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + L + +++++ ++ P + L++ +
Sbjct: 345 VLVGLLVGEVARRNELRLESRRVSDTLRLIASTY-EEPEQVIEMYRNDPQLMNGLQSRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + Q ++ ++F
Sbjct: 404 EEQVIDWIAERAQHTEQSLSFQDAI 428
>gi|289668777|ref|ZP_06489852.1| trigger factor [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 430
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 89/445 (20%), Positives = 198/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGETDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + EV + +ID+ + + + E +++GD V ++
Sbjct: 108 VPDFGDIDVTKLSVVRATAEVTDADIDQMIENLRLQRRTWNPVERGAQVGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + + ++GS +F + + L GL G++K + FP + + LAGK V
Sbjct: 168 AGDERLPAEGVETGSSVLGSGVMFDQIEKGLEGLTKGEEKTLTVDFPAEWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ VV+ + G + R +++ + + +++R++
Sbjct: 228 QVHVKAVEVSEPVLPVVDKEFIKSFGVKSGDSEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + ++ + + + + + + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVENEARSMLAQQVEQVRRSGR---DPGQVPADAHTGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + L + +++++ ++ P + L++ +
Sbjct: 345 VLVGLLVGEVARRNELRLESRRVSETLRLIASTY-EEPEQVIEMYRNDPQLMNGLQSRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + Q ++ ++F
Sbjct: 404 EEQVIDWIAERAQHTEQPLSFQDAI 428
>gi|289664186|ref|ZP_06485767.1| trigger factor [Xanthomonas campestris pv. vasculorum NCPPB702]
Length = 430
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 89/445 (20%), Positives = 199/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGETDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + EV + +ID+ + + + E +++GD V ++
Sbjct: 108 VPDFGDIDVTKLSVVRATAEVTDADIDQMIENLRLQRRTWNPVERGAQVGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + + ++GS +F + + L GL G++K + FP + + LAGK V
Sbjct: 168 AGDERLPAEGVETGSSVLGSGVMFDQIEKGLEGLTKGEEKTLTVDFPAEWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ VV+ + G + R +++ + + +++R++
Sbjct: 228 QVHVKAVEVSEPVLPVVDKEFIKSFGVKSGDSEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + ++ + + + + + + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVENEARSMLAQQVEQVRRSGR---DPGQVPADAHTGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + + L + +++++ ++ P + L++ +
Sbjct: 345 VLVGLLVGEVARRNELRLESKRVSETLRLIASTY-EEPEQVIEMYRNDPQLMNGLQSRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + Q ++ ++F
Sbjct: 404 EEQVIDWIAERAQHTEQPLSFQDAI 428
>gi|78046636|ref|YP_362811.1| trigger factor [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|325927440|ref|ZP_08188687.1| trigger factor [Xanthomonas perforans 91-118]
gi|119371028|sp|Q3BWQ2|TIG_XANC5 RecName: Full=Trigger factor; Short=TF
gi|78035066|emb|CAJ22711.1| ribosome-associated trigger factor (ATP-independent chaperone /
peptidyl-prolyl-cis-trans-isomerase) [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325542190|gb|EGD13685.1| trigger factor [Xanthomonas perforans 91-118]
Length = 430
Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 89/445 (20%), Positives = 199/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGETDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + EV + +ID+ + + + E +++GD V ++
Sbjct: 108 VPDFGDIDVTKLSVVRATAEVTDADIDQMIENLRLQRRTWNPVERGAQVGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + + ++GS +F + + L GL G++K + FP + + LAGK V
Sbjct: 168 AGDERLPAEGVETGSSVLGSGVMFDQIEKGLEGLTKGEEKTLTVDFPAEWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ V+ + G + R +++ + + +++R++
Sbjct: 228 QVHVKAVEVSEPVLPAVDKEFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + ++ + + + + + Q + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVENEARSMLAQQVEQVRRSGR---DPGQVPADAHQGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + + L + +++++ ++ P + L++ +
Sbjct: 345 VLVGLLVGEVARRNELRLESKRVSETLRLIASTY-EEPEQVIEMYRNDPQLMNGLQSRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + Q ++ ++F
Sbjct: 404 EEQVIDWIAERAQHTEQSLSFQDAI 428
>gi|226307303|ref|YP_002767263.1| trigger factor [Rhodococcus erythropolis PR4]
gi|259533640|sp|C1A1N9|TIG_RHOE4 RecName: Full=Trigger factor; Short=TF
gi|226186420|dbj|BAH34524.1| trigger factor [Rhodococcus erythropolis PR4]
Length = 457
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 87/471 (18%), Positives = 203/471 (43%), Gaps = 23/471 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F++ + + + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFAELKSDFDKAYKALAQQIRLPGFRPGKAPARLLEARVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + +++ + E ++ +A +P I + + IE L+ D
Sbjct: 61 GAVLEQVVNDALPSRYSEAVTSAGVKAIGQPEIEVTK---------IEDGELLEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ F + V D E+ ++ I+ Q+ + + + E GD V++D +
Sbjct: 112 VRPEIELPDFSSINVEVDPIEITDEAIEEQLLSLRQRFGTLTGVDRAVEDGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + VGS L E ++GLK G+ K+ + AGK+
Sbjct: 172 TVDGENVAEATASGLSHEVGSGQLIEGLDEAIIGLKAGESKDFTSTLVAG----EYAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V +++ A F++ ++ +++ + + +++ ++L
Sbjct: 228 AVVTVTVQTVKERELPAEDDEFAQLASEFDTLEELKADLRERVARVRKVEQAGQIRDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHMLA 354
+ + +PE++V+ E + L + N+ + S EE + A
Sbjct: 288 EQLLETVEVPLPEAVVKAEVDAALHDAVHGLDHDEEALNKLLEEQGSSREEFDKDAQEAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+R V T ++L +I + N+ V ++E+ + Q R+ ++ + Q+ N L + A
Sbjct: 348 ERSVKTQLLLDSIADAGNVTVGQDELTERILFQAQRYGMAPEQFIQQIQQ-ANQLGAVFA 406
Query: 415 PIFEDKVIDHILKSVQIVDRK---VTFDQLFDNSSESSPEKLLDKSSKVET 462
+ K + +++S + D V +LF +S + + D + +
Sbjct: 407 DVRRGKALASVVESAGVKDTSGAVVDTAELFGSSEDETEADASDSAESEDK 457
>gi|145589116|ref|YP_001155713.1| trigger factor [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|189035947|sp|A4SXD5|TIG_POLSQ RecName: Full=Trigger factor; Short=TF
gi|145047522|gb|ABP34149.1| trigger factor [Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 445
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 101/456 (22%), Positives = 202/456 (44%), Gaps = 26/456 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + R+ + L R+ + + GFRPGKVP S ++ YG
Sbjct: 1 MAVQIENLGSVDRKTTLEFARADLAKLREARLAKVGKTMKVAGFRPGKVPKSMVEKQYGM 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + ++ E+ K A +P + + + +++
Sbjct: 61 QVDFELQFDKASDLFYELCQKEGIPLAGQPRLEPKSEL---------EAETIAFDVFFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK-----------ETESEI 169
LP++++ F +VT+ E+ E EIDR + + K V + + T ++
Sbjct: 112 LPEVKMGDFSAAEVTKYTTEIGEAEIDRAIDVLRKQQVHYHARGEAGAHGDGGANTAAQN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+V +D+ +D V +N +F++G + E +GLK G+ K FP D
Sbjct: 172 GDQVVIDFVGKLDGVEFAGGKAENFEFVLGEGRMLPEFEAAALGLKVGESKSFPLTFPAD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEF 287
+ KD+AGK ++K V VV++ A+ LG + MR + + + +
Sbjct: 232 YHGKDVAGKTAEFTITVKSVNWAHMPVVDDAFALSLGVAEGGVAKMREEVKENLDREVKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ +K +++D ++ DVP+SLV +E ++Q R ++ +
Sbjct: 292 RITSLLKSEVMDKLNALCELDVPKSLVTSEQERLVQSARQDLMQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A +RV G++LG + +K N+ T +++++ + +Q + K+++ + P+
Sbjct: 349 EIFAEQATKRVRLGLILGELVKKQNLAATTDQIKAEIEEQAATY-EDPKEVVRWYYSNPS 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L ++ + ED VI H ++VD+ +TF++L
Sbjct: 408 RLKDIENLVLEDNVIKHFTSLAKVVDKAITFEELSK 443
>gi|229493165|ref|ZP_04386957.1| trigger factor [Rhodococcus erythropolis SK121]
gi|229319896|gb|EEN85725.1| trigger factor [Rhodococcus erythropolis SK121]
Length = 457
Score = 224 bits (569), Expect = 3e-56, Method: Composition-based stats.
Identities = 87/471 (18%), Positives = 202/471 (42%), Gaps = 23/471 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F++ + + + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFAELKSDFDKAYKALAQQIRLPGFRPGKAPARLLEARVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + +++ + E ++ +A +P I + + IE L+ D
Sbjct: 61 GAVLEQVVNDALPSRYSEAVTSAGVKAIGQPEIEVTK---------IEDGELLEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ F + V D E+ ++ I+ Q+ + + + E GD V++D +
Sbjct: 112 VRPEIELPDFSSINVEVDPIEITDEAIEEQLLSLRQRFGTLTGVDRAVEDGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + VGS L E ++GLK G+ K+ + AGK+
Sbjct: 172 TVDGENVAEATASGLSHEVGSGQLIEGLDEAIIGLKAGESKDFTSTLVAG----EYAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V +++ A F++ ++ +++ + + +++ ++L
Sbjct: 228 AVVTVTVQTVKERELPAEDDEFAQLASEFDTLEELKADLRERVARVRKVEQAGQIRDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHMLA 354
+ + +PE++V+ E + L + N+ + S EE + A
Sbjct: 288 EQLLETVEVPLPEAVVKAEVDAALHDAVHGLDHDEEALNKLLEEQGSSREEFDKDAQEAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+R V T ++L +I + N+ V ++E+ + Q R+ ++ + Q+ N L + A
Sbjct: 348 ERSVKTQLLLDSIADAGNVTVGQDELTERILFQAQRYGMAPEQFIQQIQQ-ANQLGAVFA 406
Query: 415 PIFEDKVIDHILKSVQIVDRK---VTFDQLFDNSSESSPEKLLDKSSKVET 462
+ K + +++S + D V +LF +S + D + +
Sbjct: 407 DVRRGKALASVVESAGVKDTSGAVVDTAELFGSSEAETEADASDSAESEDK 457
>gi|269468144|gb|EEZ79851.1| FKBP-type peptidyl-prolyl cis-trans isomerase [uncultured SUP05
cluster bacterium]
Length = 433
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 92/446 (20%), Positives = 208/446 (46%), Gaps = 13/446 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +GLKR L V +P + ++ ++ + + I GFR GKVPLS ++ +G
Sbjct: 1 MKTSLETLDGLKRSLTVELPIDIFKKKADQVLQKMAPQVAIDGFRKGKVPLSILRKQFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ S+ ++EI+ E + + L++ A +P IT + E + + +++
Sbjct: 61 NASSDAVNEIVNETLSDALTEVKSTPAAQPMITKVDS---------ENKTNFSYTVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I++ F L++ Q ++ + + DR M + + ++ ++ + +S+ GD++++D+
Sbjct: 112 FPEIKVGDFSKLKIDQTTVKITKADEDRTMEGLKEQSIEYKAVKRKSKDGDRLSIDFKGL 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E N ++G + + E L + ++ FP+++ LAGK V
Sbjct: 172 IDGKVFEGGEATNFNIVLGKGSMIAGFEEGLTDVVADKAVTLDLVFPKEYHAPQLAGKAV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
I EV SP ++ A + G + A++ ++++ + + + K I +
Sbjct: 232 VFEVKINEVASPKVPTLDAKFAKKFGEKDMDALQKSMKEQMRVEIDNRLSNQNKDAIFNA 291
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ FDVP+ V+NE +L ++ M S+ ++ A RRV
Sbjct: 292 LLMANEFDVPQGSVDNEARNLLSEMEARMEQQGMPSKGGS----LPASTFNGEATRRVKL 347
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+++ I NN +++++ L + + + ++M+D++ + P L+ + + E
Sbjct: 348 GLLVSQIASDNNFVASKKQLDEKLEEMSQAYGENSQQMVDYYNEDPTRLSSIELLVVEKM 407
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSS 446
V D +L+ ++ + F ++ +
Sbjct: 408 VSDLVLEKAKVTSKSKKFQEVTQPQA 433
>gi|84622588|ref|YP_449960.1| trigger factor [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|119371029|sp|Q2P6Z1|TIG_XANOM RecName: Full=Trigger factor; Short=TF
gi|84366528|dbj|BAE67686.1| peptidyl-prolyl cis-trans isomerase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 430
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 88/445 (19%), Positives = 196/445 (44%), Gaps = 20/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P RL R+ ++ IKGFRPGKVP I+ +G+
Sbjct: 1 MQASIESTGNLERRLTFTLPQERLETHVGGRLRELARTTRIKGFRPGKVPTKVIEQRFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++ +++E + + R A P I +G D ++++
Sbjct: 61 QVRAEAMEGLLRETFDSAVREHSLRLAGNPRID-------------QGETDFDFVATFEV 107
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + EV + +ID+ + + + E ++ GD V ++
Sbjct: 108 VPDFGDIDVTTLSVVRATAEVTDADIDQMIENLRLQRRIWNPVERGAQAGDLVALETWSQ 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + ++GS +F + + L GL G++K + FP + + LAGK V
Sbjct: 168 AGDERLPADGVETGSSVLGSGVMFDQIEKGLEGLTKGEEKTLSVDFPAEWRVPQLAGKTV 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ EV P+ V+ + G + R +++ + + +++R++
Sbjct: 228 QVHVKAVEVSEPVLPAVDKEFIKSFGVKSGDAEQFRADIRTNLERELKGALMNRLRREVG 287
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVENE +L + ++ + + + + + Q + A +R
Sbjct: 288 EQLIAAYAHVEMPPRLVENEARSMLAQQVEQVRRSGR---DPGQVPADAHQGFMDAAAKR 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + L + +++++ ++ P + L++ +
Sbjct: 345 VLVGLLVGEVARRNELRLESRRVSDTLRLIASTY-EEPEQVIEMYRNDPQLMNGLQSRVM 403
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
+++VID I + Q ++ ++F
Sbjct: 404 KEQVIDWIAERAQHTEQSLSFQDAI 428
>gi|134097945|ref|YP_001103606.1| putative cell division trigger factor [Saccharopolyspora erythraea
NRRL 2338]
gi|291009145|ref|ZP_06567118.1| putative cell division trigger factor [Saccharopolyspora erythraea
NRRL 2338]
gi|166229932|sp|A4F9F6|TIG_SACEN RecName: Full=Trigger factor; Short=TF
gi|133910568|emb|CAM00681.1| putative cell division trigger factor [Saccharopolyspora erythraea
NRRL 2338]
Length = 467
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 94/481 (19%), Positives = 204/481 (42%), Gaps = 24/481 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P + L +F+ + + + I GFRPGKVP ++S G+
Sbjct: 1 MKSTVEHLSPTRVRINVEVPFDELKPNFDRAYKALAQQVRIPGFRPGKVPARVLESRIGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++E + E ++ + R RP I + + IE ++ + D
Sbjct: 61 GPVLDEVVNESVPAKYLEAVNSSEVRTLGRPDIEVTK---------IEDGDVIEFKAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + +F +L+V+ D EV E+E++ Q+ E+ E ++ GD V++D +
Sbjct: 112 VRPEITVPAFGELKVSVDDVEVTEEEVNEQLDELRARFGTLAGVERPAQQGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD +E+ + + +GS L E L+G G+ + + + AGK
Sbjct: 172 TVDGQEVEEAQTSGLSYEIGSGQLIDGIDEALIGASEGETRTFT----TNLVAGEHAGKD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V V+++ A + F+S + +++ + + + ++L
Sbjct: 228 AEVTVKLNSVKERHLPEVDDEFAQMASEFDSVDELLSDLRERLGRVKRMQQGMQARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGI----LQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+ + +PE +VE+E + + + + + E+ A
Sbjct: 288 EALLETVEVPLPEKVVESEIDVRKHDAIHPFDHDEDRFGEWLEQQGQTREQFEDETREEA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V T +VL TI + ++ V++ E+ + Q RF + + Q+ L + A
Sbjct: 348 EKAVRTQLVLDTIADAEDVSVSDNELTERIIYQAQRFGVSPDQYVQQAQQS-GQLGAIYA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFD-NSSESSPEKLLDKSSKVETFQSEEAPS 470
+ K + +++ + D ++ D+LF + E E+ + E +A +
Sbjct: 407 DVRRSKALFSVVRQATVTDEEGNELDLDELFGTQAGEEQGEQAEGTEATDEQSAKADAKA 466
Query: 471 E 471
E
Sbjct: 467 E 467
>gi|171463608|ref|YP_001797721.1| trigger factor [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|238689061|sp|B1XUT0|TIG_POLNS RecName: Full=Trigger factor; Short=TF
gi|171193146|gb|ACB44107.1| trigger factor [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 445
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 96/456 (21%), Positives = 197/456 (43%), Gaps = 26/456 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + L R++ + L + R+ + + GFRPGKVP + ++ +G
Sbjct: 1 MAVQIENLGSLDRKMTLEFARADLAKAREARLAKVGKSMKMAGFRPGKVPKNLVEKQHGM 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E+ E+ K A +P + + +++
Sbjct: 61 QVDFELQFDKAAELFYELAQKEGVALAGQPRLEPKSEI---------DAEKVVFDAFFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI----------- 169
LP+++I F +VT+ ++ E EIDR + + K V + +
Sbjct: 112 LPEVKIGDFSKAEVTKYTTDIGEAEIDRALDALRKQQVHYHPRGEAGPHGDGGSNTAAQN 171
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
GD+V +++ +D V +N + ++G + E +GLK G+ K FP D
Sbjct: 172 GDQVVINFVGKIDGVEFAGGKAENFECVLGEGRMLPEFEAATLGLKVGESKSFPLSFPAD 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEF 287
+ KD+AGK ++K V VV++ A+ LG + MR + + + +
Sbjct: 232 YHGKDVAGKTAEFTITVKSVNWAHLPVVDDAFALSLGVTEGGVTKMRAEVKENLDREVKR 291
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
V +K +++D +++ DVP+SLV +E +++ R ++ +
Sbjct: 292 RVTTLLKSEVMDKLNSLCELDVPKSLVASEQERLVEGARQDLMQRGVPNA---KDAPIPA 348
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A +RV G++L + + N+ T +++++ + +Q + K+++ F + P
Sbjct: 349 EIFAEQATKRVRLGLILSELVKNQNLIATADQIKAEIDEQATTY-EDPKEVIRWFYRNPG 407
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L ++ + ED VI + ++ D+ VTF++L
Sbjct: 408 RLKDIENLVLEDNVIKYFTSQAKVNDKSVTFEELSK 443
>gi|254524752|ref|ZP_05136807.1| trigger factor [Stenotrophomonas sp. SKA14]
gi|219722343|gb|EED40868.1| trigger factor [Stenotrophomonas sp. SKA14]
Length = 431
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 92/447 (20%), Positives = 192/447 (42%), Gaps = 19/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P +RL R+ +I IKGFRPGKVP I+ +G
Sbjct: 1 MQASIESTGNLERRLSFSLPEDRLQSHIVGRLGEIARTTRIKGFRPGKVPAKVIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E +D +++E + + D R P I + + ++
Sbjct: 61 QVRGEALDGLLRETFDAAVREHDLRIVGSPRIDKG------------DEGEFSFVATVEV 108
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + E+ + +ID+ + + + ++ GD V V+
Sbjct: 109 VPDFGDIDVSKLTVVRHSAEITDADIDQMIENLQNQRRTWAPVSRGAQDGDLVAVETWSQ 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
L + + ++G +F + LVGL G++K ++ FP D + LAGK V
Sbjct: 169 AGEERLPAEGTEKGSIVLGQGMMFDTIEKGLVGLAKGEEKTLDVEFPADWRVPVLAGKTV 228
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + EV P+ V+ G + R +++ + + +++R++
Sbjct: 229 QVTVKVAEVSEPVVPAVDEAFIKSFGVKGGDVEQFRSDIRANLERELKGALMNRLRREVG 288
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ + ++P LVENE +L + ++ QNV I + + + A +R
Sbjct: 289 EQLIAAYASVEMPPRLVENEARAMLAQQVEQIRRNG---QNVGEIPADAHEGFKDAAAKR 345
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + N++ + + + + + +++++ ++ P ++ L+ +
Sbjct: 346 VLVGLLVGEVARTNDLRLEAKRLNETMRLIASTY-EEPEQVIEMYRNDPQLMSGLQNRVM 404
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDN 444
E++VID I + Q + K++F
Sbjct: 405 EEQVIDWIAERAQHTEEKLSFQDAIRQ 431
>gi|254821429|ref|ZP_05226430.1| trigger factor [Mycobacterium intracellulare ATCC 13950]
Length = 464
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/478 (14%), Positives = 191/478 (39%), Gaps = 23/478 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P + L F +++ + + GFRPGK P +++ +G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFSELEPDFQRAYKELARQVRLPGFRPGKAPAKLLEARFGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + + + + +++ + +P I + + E +L D
Sbjct: 61 EAMLDQVVTDALPARYGQAVAESEVHPLGQPEIEVTKK---------EYGEELAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P++ + L ++ D E+ + ++D ++ + + GD V++D +
Sbjct: 112 IRPKLTLPDPGSLTISVDPIEISDDDVDAELQSLRARFGTLTGVDRPVADGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + + + + VGS L + E LVGL + KE + AGK
Sbjct: 172 TIDGEEVPGATAQGLSHEVGSGRLIAGLDEALVGLSVDESKEFTAQLATG----EHAGKD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++K V +++ A F++ +R +++ + + ++ +
Sbjct: 228 AQVTVTVKSVKQRELPEPDDEFAQLASEFDTIEELRSNLREQVGRTKRAQQAEAIRDAAI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----A 354
D + + +PE++V+ + + L + K V + + + + A
Sbjct: 288 DTLLEQVDIPLPEAIVKAQVDSALHNALHSLDHDESKLDEVLAQQGKSREEFETETRTAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V ++L + ++ ++V ++++ L ++ ++++ + Q+ N L + A
Sbjct: 348 ETDVKRQLLLDALADELEVQVGQDDLTERLVATSRQYGIEPQQLVAYLQEN-NQLPAMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+ I ++++ + D V D+ F + + E+ +++
Sbjct: 407 DVRRALAIAEVIRAATVTDTAGNTVDTDEFFGKRAGADEAADDISGDAEESTKADAEE 464
>gi|319787637|ref|YP_004147112.1| trigger factor [Pseudoxanthomonas suwonensis 11-1]
gi|317466149|gb|ADV27881.1| trigger factor [Pseudoxanthomonas suwonensis 11-1]
Length = 432
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 90/445 (20%), Positives = 201/445 (45%), Gaps = 18/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R L+ +P+ +L + R+ +I IKGFRPGKVP ++ +G+
Sbjct: 1 MQVSVESTGNLERRLNFSLPAEQLEAGVSGRLREIARTVRIKGFRPGKVPAKVVEQRFGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E + ++++ + + + + A P I G +L ++++
Sbjct: 61 QVKAEVLGALVRQAFDSAIRENELQLAGSPRID------------RAGEGELDFVATFEV 108
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P LQV + EV + +ID+ + + + E + GD V
Sbjct: 109 VPDFGEIDVAKLQVIRHTAEVTDADIDQMIENLRLQRRTWNKVERAAAEGDMVVGTLWTQ 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V + + ++ ++GSA L L GL+ G + I+ FPE+ +LAGK
Sbjct: 169 VGDFRQPAEGEERFSTVIGSAQLLPALEAALAGLEQGSEHVIDVAFPENWRQAELAGKTA 228
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ +++V P+ V+ G +S R +++ + + +++R++
Sbjct: 229 QVHVVLQQVSEPVLPEVDAAFIKSFGVKSGEMDKFRDDIRTNLERELKGALMNRLRREVG 288
Query: 299 DYI-SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + + ++P +VENE G+L + ++ + + D Q + A++R
Sbjct: 289 EQLTATWAHVELPPRVVENEARGMLAQQVEQIRRSTGRDPGQPPADAW--QQFLEPARKR 346
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + +N + + + + L + + +++ ++ P + L+A +
Sbjct: 347 VLAGLLVGEVARRNELRLDPKRLNDTLRLIASTY-EEPEAVIEMYRNDPQLMQGLQARVM 405
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLF 442
E++VID I + Q ++ ++F +
Sbjct: 406 EEQVIDWIAERAQHTEQALSFQEAI 430
>gi|86739911|ref|YP_480311.1| trigger factor [Frankia sp. CcI3]
gi|119370899|sp|Q2JDR0|TIG_FRASC RecName: Full=Trigger factor; Short=TF
gi|86566773|gb|ABD10582.1| trigger factor [Frankia sp. CcI3]
Length = 483
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 80/475 (16%), Positives = 181/475 (38%), Gaps = 20/475 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ ++ + +L V +P + L S + + + GFRPGKVP + G+
Sbjct: 1 MKATKETLSPTRVKLTVEVPFDELKPSLEATYRKLARQVRVSGFRPGKVPPRILDQRLGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E + E + ++ E + + RP + I E L D
Sbjct: 61 GVILDEAVQEALPQLYSEAVQAEEVDVLSRPEVDITE---------FADGGQLVFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++ + F +L++T D EV +++++ Q+ + E + GD V++D +
Sbjct: 112 VRPEVTLPEFSELEITVDAVEVTDEQVEEQLGALRDRFAVLTPVERAVQAGDYVSLDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D ++ + + VGS +L + ++G G+ + + + AG+
Sbjct: 172 EADGTPIDGAEATGLSYEVGSGNLVEGLDDAIIGATDGETRTFT----TELLSGEQAGQP 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +++ V +++D A F++ +R +++Q + + ++L
Sbjct: 228 AQVTATVRGVKEKELPALDDDFATTASEFDTLDELRADIRTRLEQSRRTEQVGQAREKLL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
+ + + VP SL+ E ++ E+ + + +EE A
Sbjct: 288 ESLLERVEVPVPGSLLAGEIEAREHRLSRELEYIGTDRPSYLETLGQTEEEFDAEVRESA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + + +L + + +I + + E+ L + R + L L A
Sbjct: 348 GKAIRSQFILDAVIDAESIGIDQGELMEQLILRAQRSGVQPDVYAQQLAQ-GEGLTALMA 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+ K + +L++ ++VD T +L + + T +E
Sbjct: 407 DVLRTKALFLLLENAKVVDGAGTPVELALPARSQPDTDADADHDRDVTVAAEAVA 461
>gi|331695806|ref|YP_004332045.1| Trigger factor [Pseudonocardia dioxanivorans CB1190]
gi|326950495|gb|AEA24192.1| Trigger factor [Pseudonocardia dioxanivorans CB1190]
Length = 494
Score = 221 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 80/460 (17%), Positives = 167/460 (36%), Gaps = 24/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +V +P + L F+ + I + I GFRPGK P +++ G+
Sbjct: 1 MKSTVEHLSPTRVRFNVEVPFDELKPDFDRAYKKIAQQVRIPGFRPGKAPARILEARLGR 60
Query: 61 S-ILSETIDEIIKEIVPEIL-SKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+L E ++ I E + + RP I + E I L
Sbjct: 61 GVVLDEVVNGAIPGKYSEAVTASEKVTPIGRPDIEVTE---------IADGDKLAFTAEV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
D+ P+I + D + V D V ++++ Q+ + + E + GD V +D +
Sbjct: 112 DVRPEIALPDLDGIAVQVDDVAVTDEQVTEQLDSLRARFGTLKGVERPAAEGDFVQIDLS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD +E+ + + VG L E + GL G+ K D A K
Sbjct: 172 ASVDGKEIEEAATTGFSYQVGQGGLIDGIDEAITGLSEGESKTFTSTLVAG----DYADK 227
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ V +++ A F++ + +++ + + + ++
Sbjct: 228 DAAVTVTVTAVKERDLPEADDEFAQLASEFDTLDELTADLKERLGRVRRMEQVSQARDKV 287
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
LD I +PE++V E L + K EE
Sbjct: 288 LDAIVEATEVPLPETVVAAEVESSLHDAVHAFDHDDDKFAEFLTSQGKTREEFDAEVRAD 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ V ++L + + + V ++E+ + Q ++ + + Q+ L +
Sbjct: 348 AEKSVKVRLILDALADAEEVSVNDQELTERIVYQAQQYGMSPDEFVQRIQQS-GQLGAIY 406
Query: 414 APIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSP 450
+ + K + +++ + D V L + E++
Sbjct: 407 SDVRRSKALIVAVRAATVTDEAGTAVDLSDLLGPADEAAE 446
>gi|262201985|ref|YP_003273193.1| trigger factor [Gordonia bronchialis DSM 43247]
gi|262085332|gb|ACY21300.1| trigger factor [Gordonia bronchialis DSM 43247]
Length = 454
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 89/452 (19%), Positives = 195/452 (43%), Gaps = 23/452 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L+V +P L+ F+ + + I GFRPGK P I++ G+
Sbjct: 1 MKSTVEQLTPTRVKLNVEVPFEELSAEFDRTYRSLAQQIRIPGFRPGKAPAKLIEARVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
SIL++ +++ + E +++ + +A +P I ++E ++ + D
Sbjct: 61 DSILAQVVNDALPGKYSEAVAETETKAIGQPEIDLSE---------LKYGESVTFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I++ + L V D E+++ +D Q+ + + + ++ GD V++D
Sbjct: 112 VRPEIDLPDYSTLAVEVDPIEIEDDAVDEQLEGLRARFGTLKGVDRGAQDGDFVSIDLAA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +++ S + + VGS L E LVGLK GD K D AG+
Sbjct: 172 EVDGEPVDEASTEGLSHEVGSGQLIDGLDEALVGLKAGDSKVFTTKLVAG----DHAGED 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++ V V+++ A + F++ ++ +++ Q + ++ ++L
Sbjct: 228 AQVTVTVNSVKERELPEVDDEFAQMASEFDTVDELKESLRERVTQSKKVEQANAIRDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY----HMLA 354
D + + +PE +VE E G +V + +++ + + A
Sbjct: 288 DALLDTVEVPLPEKVVEGEIEGQQHQVIHALGHDDEQLAKFLEAQGTTREEWDAEARTEA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V T ++L I E+ EV+++E+ + Q R+ ++ + + N + + A
Sbjct: 348 EKSVRTQLLLDAIAEQQETEVSQDELTQQIIFQAQRYGMQPQEFIQQLTQ-ANQVGAVYA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFD 443
+ K + I+ V + D V + F
Sbjct: 407 DVRRGKALAGIVGQVTVTDTNGATVDTSEFFG 438
>gi|256375293|ref|YP_003098953.1| trigger factor [Actinosynnema mirum DSM 43827]
gi|255919596|gb|ACU35107.1| trigger factor [Actinosynnema mirum DSM 43827]
Length = 450
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 85/464 (18%), Positives = 185/464 (39%), Gaps = 23/464 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P + L F+ + + I GFRPGKVP ++S G+
Sbjct: 1 MKSTVEHLSPTRVRINVEVPFDELKSDFDRAYRKLAKQVRIPGFRPGKVPARVLESRIGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ +L E + E I E ++ + R RP + + IE ++ D
Sbjct: 61 APVLDEVVQEAIPAKYLEAVNSGELRTLGRPDFEVTK---------IEDGDTIEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + +F +L V+ EV ++++ Q+ E+ + ++ GD V VD +
Sbjct: 112 VRPEITVPAFGELSVSVGEQEVTDEDVATQLDELRARFGTLTGVKRPAQQGDFVVVDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD +E+ + + +GS L E LVG G+ K D AG+
Sbjct: 172 TVDGEEVEEAKTSGLSYEIGSGQLVEGIDEALVGASEGETKNFTTKLVAG----DHAGRD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V ++++ A F++ ++ ++ + + + + ++L
Sbjct: 228 ADVVVVLSSVKERQLPELDDEFAQLASEFDTLDELKDDLRTRLGRVKKMQQGVEARDKVL 287
Query: 299 DYISNKYTFDVPESLV----ENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+ + +PE++V E + + + + EE +
Sbjct: 288 EALLAGVEVPLPEAVVQSEIEVREHDAVHSFDHDQERFDAWLAEQGQTKEEFDAEVRTAS 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V T +VL I + + V++ E+ + Q RF + + Q+ L + A
Sbjct: 348 EQAVKTQLVLDAIADAEQLTVSDAELTERIIYQAQRFGVSPDEYVKRAQQS-GQLGAIFA 406
Query: 415 PIFEDKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLD 455
+ K + +++ + D K+ D+LF + + + +
Sbjct: 407 DVRRGKALATVVRQATVTDESGEKLDLDELFGEAKPAEDDSTEE 450
>gi|325983083|ref|YP_004295485.1| trigger factor [Nitrosomonas sp. AL212]
gi|325532602|gb|ADZ27323.1| trigger factor [Nitrosomonas sp. AL212]
Length = 434
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 99/445 (22%), Positives = 199/445 (44%), Gaps = 15/445 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + L+R D+ I +L D N R++ + GFRPGKVPL+ +K +YG
Sbjct: 1 MESKVENLGALERRFDISISLEKLQDEINLRLKKLAKTTKFHGFRPGKVPLTIVKQMYGV 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + I++ I + + + + + + A P E + ++++
Sbjct: 61 QVQQDVINDAIHKEFTDTVKENNLKIAGYPRFE--------NKSTNEQDALYTVSATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I + + V Q VDE +ID+ + I+K V ++ + GD+V +DY
Sbjct: 113 YPEIILGDLSNQSVDQLDVRVDEVDIDKTIDMISKQRVTYQPVSRAAIKGDRVKIDYHGV 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ +VQ I+G + L+G+K G+ K + FP+++ KD+AGK V
Sbjct: 173 INGDDFAGGKADDVQLILGDGKFLKDFESSLIGMKVGNHKSFDVVFPQEYHGKDVAGKSV 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ E+ P+ V+ + A LG +R + +++ R K+K Q++
Sbjct: 233 TFEVKMNELEMPILPSVDEEFAKSLGVPDGDLKKLREGIKKDLEREISKRSRSKLKEQVM 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
I + P LV E +LQ + ++ + K+ + E A+ RV
Sbjct: 293 RAILETTQIEAPIVLVNQELERLLQDAKSDLEARGIKANEISLKTELFKDK----AEYRV 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L + + ++I+ ++S + + + + ++++ P L E + E
Sbjct: 349 KLGLILAELVKVHSIKNNPAHVRS-IIENAAQSYENPEQVVKWHYASPERLQEAESLALE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD 443
+ ++D L V+++++ VTFD+L
Sbjct: 408 ENIVDWALGQVKLINKTVTFDELMG 432
>gi|297538722|ref|YP_003674491.1| trigger factor [Methylotenera sp. 301]
gi|297258069|gb|ADI29914.1| trigger factor [Methylotenera sp. 301]
Length = 434
Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats.
Identities = 88/447 (19%), Positives = 185/447 (41%), Gaps = 15/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P L ++R+ + A GFRPGK P+ + YG
Sbjct: 1 MALNVETISKLERRITISVPLQPLQAQIHQRLAQMSRTAKFAGFRPGKAPMGLVNQHYGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E +++ + + + R A P+I T +L+ ++++
Sbjct: 61 QVRDEVYSGAVEKSFGDAVDEAKLRVAGYPNIE--------HKPFDAATQNLEYTATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ +++ + + EV E ++ + + + K V++ + ++ GD + V S
Sbjct: 113 FPEVVYGDLAKMKIERPVIEVGEADVKKTLDVLVKQRVSYSPVKRAAKKGDSINVTLKAS 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D +E K + ++G A L G K G K+ + +P DH+ + LAGK V
Sbjct: 173 IDGKEVESTGDKGIDLVLGEAGRVESFDAELTGGKVGTSKQFDISYPADHTPEQLAGKTV 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V P ++ D A LG E M+ ++ + Q V K+K Q+
Sbjct: 233 TYDVTYVSVSEPKLPALDADFAKSLGIEDGDVEKMKAEITESLNQEVAKRVSAKLKEQVF 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ F++P L+ +E N +++ + + + AKR
Sbjct: 293 QALVESADFEIPRILLGSEINRMMETTAQNLKQRGADLSTIKLEPSMFEE----QAKRST 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++LG + N + +++++ + + ++ + P L E A E
Sbjct: 349 TLRLILGELINTNGLHANADQIRA-MVDVFSQSFERPADVVTWYYADPKRLDEPSALATE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
+ + ++L ++ D+KV FD L N+
Sbjct: 408 ENAVAYVLSKAKVTDKKVKFDDLMGNA 434
>gi|78223081|ref|YP_384828.1| trigger factor [Geobacter metallireducens GS-15]
gi|119370901|sp|Q39UH1|TIG_GEOMG RecName: Full=Trigger factor; Short=TF
gi|78194336|gb|ABB32103.1| Trigger factor [Geobacter metallireducens GS-15]
Length = 433
Score = 220 bits (560), Expect = 4e-55, Method: Composition-based stats.
Identities = 94/444 (21%), Positives = 204/444 (45%), Gaps = 14/444 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +K+++ IP+ R++ + I+ +A IKGFR GKVP S ++ Y
Sbjct: 1 MTSTVESLSSVKKKISFEIPAERVSAEIEKVFGQIQKRAAIKGFRKGKVPRSLVEQNYRS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ S+ + + E + L+ P I +E ++ LK + ++
Sbjct: 61 MMESDVLKNLFDETYFKALADHKIFPVSHPHIESDE---------VKRGEALKYSATVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYT 178
P+I++ + L+V ++ D ++ ++ E+ + + E + V +D+
Sbjct: 112 FPEIDVKDYKGLEVKRERFVSDVAPVEARLNEMREGMAELKPLEEGKCAETGNFVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + E + ++ Q +GS + LVG+K G+Q+ +E FPE++ KDLAGK
Sbjct: 172 GSVDGIPFEGGAAESYQLELGSGRFIPGFEDQLVGVKAGEQRTVEVTFPEEYGNKDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KE ++++ A++ FE+ ++ ++ K ++ V+ +I
Sbjct: 232 AASFAVTVKEAKVKELPELDDEFAMQFGEFETLEQLKTKLAELHKDQETARIKADVQDRI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + +VP +LVE + +L ++ ++ + + DE +Y A+ +
Sbjct: 292 VKALIGNNEIEVPSTLVERQLQMMLSNMKNRLAQQRLSLEMMGMDDESFKTHYRDSAESQ 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V ++L + +K I V + ++++ L ++ D +++ NA L A +
Sbjct: 352 VKGSLLLEAVAKKEGITVNDPDVEAKLRAMAEEAGQDFDRVKDFYEQNHNAKENLVAHLN 411
Query: 418 EDKVIDHILKSVQIVDRKVTFDQL 441
E+KV+ ++L++ + + V D+L
Sbjct: 412 EEKVLGYLLENAVVTE--VAKDEL 433
>gi|39996892|ref|NP_952843.1| trigger factor [Geobacter sulfurreducens PCA]
gi|67461824|sp|Q74C81|TIG_GEOSL RecName: Full=Trigger factor; Short=TF
gi|39983780|gb|AAR35170.1| trigger factor [Geobacter sulfurreducens PCA]
gi|298505905|gb|ADI84628.1| peptidylprolyl cis-trans isomerase, FKBP-type (trigger factor)
[Geobacter sulfurreducens KN400]
Length = 431
Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 99/438 (22%), Positives = 207/438 (47%), Gaps = 12/438 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +K+++ IP++R+T ++ E IR +A IKGFR GK P S I+ Y
Sbjct: 1 MTSTVESLSSVKKKISFEIPADRVTSEIDKVFEKIRKRAAIKGFRKGKAPQSLIEKHYAD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + + +E + L++ P I +E I+ + ++
Sbjct: 61 VMEGDVLKNLFEETYFKALAEHKIFPVSHPVIDSDE---------IKRGTPFTYSATVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
LP+I++ ++ L+V ++ DE +++++ E+ +N E S E G +D+T
Sbjct: 112 LPEIDVKDYNGLEVAKETFTPDESIVEKRLQEMRENMSHLRSLEEGSVAEDGHFAVIDFT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E S ++ Q +GS E +VG+KTG+ K + FPED+ KDLAGK
Sbjct: 172 GYVDGVPFEGGSAESYQLELGSGRFIPGFEEQIVGMKTGESKSMSLNFPEDYWNKDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ R + + E+ +N++ A ++ F++ + +R ++ ++ ++ ++ ++
Sbjct: 232 EARFDVILSEIKVKELPELNDEFAAQMGEFDTITQLRDKIAELYEKQENDRIKADLQDRV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + K +VP +LV+ + +L + ++ + + +E Y +A+ +
Sbjct: 292 VQALIEKNEIEVPSTLVDRQLQTMLANAQNRLAQQRLTFEMMGMNEESFKAQYRTVAENQ 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V ++L + +K I V E +++ L + G ++ +++ A L A +
Sbjct: 352 VKGSLLLEAVAKKEGISVEEADIEKKLLEIAGGNEEELGRVKSFYEQNRAARENLVAHLA 411
Query: 418 EDKVIDHILKSVQIVDRK 435
E+KV+ +L S I ++
Sbjct: 412 EEKVMSFLLGSAVISEKT 429
>gi|288920826|ref|ZP_06415124.1| trigger factor [Frankia sp. EUN1f]
gi|288347785|gb|EFC82064.1| trigger factor [Frankia sp. EUN1f]
Length = 493
Score = 220 bits (559), Expect = 5e-55, Method: Composition-based stats.
Identities = 88/476 (18%), Positives = 189/476 (39%), Gaps = 21/476 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ ++ + +L V +P + L S + + + + GFRPGKVP + G+
Sbjct: 1 MKATKETLSPTRVKLTVEVPFDELKPSVDATYRKLARQVRVSGFRPGKVPPRILDQRLGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E I E + + E + + RP + I E L D
Sbjct: 61 GVILDEAIQEALPRLYSEAVQAEEVDVLSRPEVDITE---------FADGAQLVFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P + + F DL++ + V +++++ + + + E + GD V++D +
Sbjct: 112 VRPDVTLPEFGDLELVVEPAVVSDEKVEEYLGTLRDRFAVLKPVERAVQEGDFVSLDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
SVD +ED + + + VGS +L E + G GD++ + + + AG+
Sbjct: 172 SVDGEAIEDATATGMSYEVGSGNLIDGIDEAITGASDGDERTFD----TELLAGEYAGRT 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++ V +++D A F++ +R +++ + + + ++L
Sbjct: 228 AQVTAVVRGVKEKELPELDDDFATTASEFDTLDELRADVRTRLETVRKQEQLGEAREKLL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
D + VPES++ E ++ E+ + + EE A
Sbjct: 288 DKLVELVEVPVPESVLAGELEAREHRLSHELEHMGTDRAAYLETLGQSAEEFDSEVRDSA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + + +L + + +I + + E+ + + R + H + L L A
Sbjct: 348 GKAIRSQFILDAVIDAESIGLDQGELMEQILMRAQRAGVQPDQYAQHLAQ-GEGLTALMA 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ K + +L++V++VD + +L S+ E D + +EE P+
Sbjct: 407 DVLRTKALFLLLENVKVVDSEGNPVELHLPRRPSADEG-DDVVDISDELDAEELPT 461
>gi|194364613|ref|YP_002027223.1| trigger factor [Stenotrophomonas maltophilia R551-3]
gi|238693449|sp|B4SLN0|TIG_STRM5 RecName: Full=Trigger factor; Short=TF
gi|194347417|gb|ACF50540.1| trigger factor [Stenotrophomonas maltophilia R551-3]
Length = 431
Score = 220 bits (559), Expect = 5e-55, Method: Composition-based stats.
Identities = 93/447 (20%), Positives = 193/447 (43%), Gaps = 19/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P +RL R+ +I IKGFRPGKVP I+ +G
Sbjct: 1 MQASIESTGNLERRLSFSLPEDRLQSHIVGRLGEIARTTRIKGFRPGKVPAKVIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E +D +++E + + D R P I E + + ++
Sbjct: 61 QVRGEALDGLLRETFDAAVREHDLRIVGSPRIDKGE------------EGEFSFVATVEV 108
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + E+ + +ID+ + + + ++ GD V V+
Sbjct: 109 VPDFGDIDVSKLTVVRHSAEISDADIDQMIENLQNQRRTWAPVSRGAQDGDLVAVETWSQ 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
L + + ++G +F + LVGL G++K ++ FP D + LAGK V
Sbjct: 169 AGEERLPAEGTEKGSIVLGQGMMFETIEKGLVGLAKGEEKTLDVEFPADWRVPVLAGKTV 228
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + EV P+ V+ G + R +++ + + +++R++
Sbjct: 229 QVTVKVAEVSEPVVPAVDEAFIKSFGVKGGDVEQFRSDIRANLERELKGALMNRLRREVG 288
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ + ++P LVENE +L + ++ QNV I + + + A +R
Sbjct: 289 EQLIAAYASVEMPPRLVENEARAMLAQQVEQIRRNG---QNVGEIPADAHEGFKDAAAKR 345
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + N++ + + + + + +++++ ++ P ++ L+ +
Sbjct: 346 VLVGLLVGEVARVNDLRLEAKRLNETMRLIASTY-EEPEQVIEMYRNDPQLMSGLQNRVM 404
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDN 444
E++VID I + Q + K++F
Sbjct: 405 EEQVIDWIAERAQHTEEKLSFQDAIRQ 431
>gi|148244362|ref|YP_001219056.1| trigger factor [Candidatus Vesicomyosocius okutanii HA]
gi|166229952|sp|A5CXJ7|TIG_VESOH RecName: Full=Trigger factor; Short=TF
gi|146326189|dbj|BAF61332.1| trigger factor [Candidatus Vesicomyosocius okutanii HA]
Length = 429
Score = 220 bits (559), Expect = 5e-55, Method: Composition-based stats.
Identities = 84/441 (19%), Positives = 208/441 (47%), Gaps = 14/441 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +GL R L + +P + ++ ++ + + NI GFR GKVP+S ++ +G
Sbjct: 1 MKTSLETLKGLSRSLTIDLPIDIFNQKMDKILQKMALEVNIDGFRKGKVPISIVRKRFGN 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ S+ I+EI+ E + + L++ +P IT + + + +++
Sbjct: 61 NANSDVINEIVNETLTDALAQVKLTPVAQPVITKVDS---------NSNKNFSYTVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I+I+ F +L + Q + + + + + + ++ + +S++GD++++D+
Sbjct: 112 FPKIKIADFSELSIEQTKVNITKADEQKTLDGLKDRLTEYKAVQCKSKMGDRLSIDFKGL 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ + K+ + ++G + E L+ + + ++ FP+D+ + LA K V
Sbjct: 172 INGETFDGGEAKDFKIVLGKGSMIKGFEEGLIDVAYSSRVVLDLTFPKDYYMDKLASKDV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+I E+ SP + ++ A + G ++ +A+R ++++ + + K I D
Sbjct: 232 TFEININEIASPKELKLDETFAKKFGEKNMNALRVSMKEQMRVEVDGRIGHLNKNAIFDK 291
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
++ F+VP+ ++NE + + ++ M +Q E + ++ A+RRV
Sbjct: 292 LTTANPFNVPQHSIDNEAQNLFKAMQDRMQHQGLSTQG-----EMPITAFNDEAQRRVKL 346
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+++ I + V+ +++ L + + + ++M+D + + P + + + E
Sbjct: 347 GLLVNQISRDYKLSVSMKQIDEKLKEISKTYGENAQQMIDFYNQDPTRKSSIELLVVEKM 406
Query: 421 VIDHILKSVQIVDRKVTFDQL 441
V D IL Q+ ++ F ++
Sbjct: 407 VQDLILDKAQVTFKQKKFQEI 427
>gi|111221347|ref|YP_712141.1| trigger factor [Frankia alni ACN14a]
gi|122954458|sp|Q0RPH4|TIG_FRAAA RecName: Full=Trigger factor; Short=TF
gi|111148879|emb|CAJ60558.1| Trigger factor (TF) [Frankia alni ACN14a]
Length = 493
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 85/474 (17%), Positives = 186/474 (39%), Gaps = 20/474 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ ++ + +L V +P + L S + + + + GFRPGKVP + G+
Sbjct: 1 MKATKETLSPTRVKLTVEVPFDELKPSLDATYRKLARQVRVSGFRPGKVPPRILDQRLGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E + E + ++ E + + RP + I E L D
Sbjct: 61 GVILDEAVQEALPQLYSEAVQAEEVDVLSRPEVDITE---------FADGGQLVFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++ + F DL VT D EV +++++ Q+ + + E + GD V++D +
Sbjct: 112 VRPEVALPEFADLSVTVDAVEVTDEQVEEQLGALRDRFAQLQPVERAVQTGDFVSLDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D +E + + VGS +L E +VG G+ + + D AG++
Sbjct: 172 QADGKPIEGAEATGLSYEVGSGNLIEGLDEAIVGAADGESRTFT----TELLAGDQAGQQ 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V +++D A F++ +RG +++Q + + ++L
Sbjct: 228 AEVTATVRGVKEKELPALDDDFATTASEFDTLDDLRGDVRSRLEQSRRTEQVGQAREKLL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLA 354
+ + + VP+SL+ E ++ E+ + + + EE A
Sbjct: 288 ESLLERVDVPVPDSLLAGEIEAREHRLSHELENIGTDRATYLETLGQTAEEFDAEVRETA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + + +L + + +I + + E+ + + R + L L A
Sbjct: 348 GKAIRSQFILDAVIDAESIGIDQGELMEQVIYRAQRSGLQPDVYAQQLAQ-GEGLQALMA 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEA 468
+ K + +L++ ++VD + +L + + D + + + A
Sbjct: 407 DVLRTKALFLLLENAKVVDGEGNPVELALPARPAPDADEDDDHAGHDHEGHDHA 460
>gi|289641549|ref|ZP_06473711.1| trigger factor [Frankia symbiont of Datisca glomerata]
gi|289508644|gb|EFD29581.1| trigger factor [Frankia symbiont of Datisca glomerata]
Length = 490
Score = 219 bits (558), Expect = 5e-55, Method: Composition-based stats.
Identities = 83/447 (18%), Positives = 176/447 (39%), Gaps = 20/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ ++ + +L V +P + L S + + + GFRPGKVP + G+
Sbjct: 1 MKATKETLSPTRVKLTVEVPFDELKPSVDAAYRKLARDVRVSGFRPGKVPPRILDQRLGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E I + + + + + +P + I L D
Sbjct: 61 GTILEEAIHSALPRFYTDAVRQEEVDVLSQPEVDI---------SSFADGAPLVFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + + +++T D EV E+++ + + + E + GD +++D T
Sbjct: 112 VRPEIALPEYGTVEITVDAAEVTEEQVQAHLTTLRERFAVLRPVERPVQAGDFISLDLTA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD +E + + VGS DL E + G+ G+ + F + + AGK
Sbjct: 172 TVDGETVEGADAAGLSYEVGSGDLVEGLDEAITGVSEGESR----TFQTELLAGEHAGKS 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V +++D A F+S + + + Q + + + +IL
Sbjct: 228 AEVTATVRGVKERELPELDDDFATTASEFDSLAELLEDVRASLGQGARLNQLNQARERIL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLA 354
D + + VPES++++E ++ E+ +++ ++E L L
Sbjct: 288 DDLIERLDVPVPESVLDSEVEAREHRLSHELERLGLERAAYLESLGQSEQEYLDELRRLG 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
R + + +L + I V + E+ + + R + + LA + A
Sbjct: 348 ARALRSQFILDAVINIEQIGVEQGELMEQIIGRAQRAGLSPEVFAQQISQ-GEGLASIMA 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQL 441
K + +L+ V++VD + +L
Sbjct: 407 DTLRGKALTFLLEQVKVVDAEGNAVEL 433
>gi|148263971|ref|YP_001230677.1| trigger factor [Geobacter uraniireducens Rf4]
gi|189035939|sp|A5GF99|TIG_GEOUR RecName: Full=Trigger factor; Short=TF
gi|146397471|gb|ABQ26104.1| trigger factor [Geobacter uraniireducens Rf4]
Length = 433
Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats.
Identities = 95/440 (21%), Positives = 204/440 (46%), Gaps = 12/440 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + +K++++ IPS R+ + +IR A IKGFR GKVP + +
Sbjct: 1 MRINVESLSSIKKKINFEIPSERVASEVEKAYGEIRKHAAIKGFRKGKVPKDLLVKHFSD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + II + + L + P I +E ++ K + +I
Sbjct: 61 KMADDVLKNIINDTYFKALMDENIYPVSHPVIESDE---------LKVGESFKYSATVEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
P + + + L+V ++ +E+ I ++ E+ +N E + + GD VT D+
Sbjct: 112 FPDVVVKDYTGLEVKKEKYVFNEEVIANRLKEMQENMSHLEPADAQHSAMNGDFVTFDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V + + ++ Q +GS + +VG+K GD+ EI+ FPE++ KDLAGK
Sbjct: 172 GFVGGEPFDGGAAEDYQLELGSGRFIPGFEDQIVGMKVGDEGEIKVTFPENYGQKDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +IKE+ +N+D A FES ++ S+ + +++ ++
Sbjct: 232 EATFAVTIKEIKVKELPELNDDFAKDFGEFESLDQLKAKISEVYALQENERIETELRERL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + +K F+VPE+L++ + N +L+ + ++ + + DE + +A+ +
Sbjct: 292 IKALIDKNNFEVPETLIDKQLNLMLENSKKRLAMQRLTMEMMGLNDEGYKIQFRSVAETQ 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V ++L + + +I+V ++++ + + + + + + + +Q+ A L A +
Sbjct: 352 VKGSLLLEALARQESIQVADDDLDAKIKEIAAQNNQELETVNNFYQQNAQAKENLTAQLK 411
Query: 418 EDKVIDHILKSVQIVDRKVT 437
EDKV+D +L +I + +
Sbjct: 412 EDKVVDFLLAKAKIDEVDRS 431
>gi|323144790|ref|ZP_08079364.1| trigger factor [Succinatimonas hippei YIT 12066]
gi|322415436|gb|EFY06196.1| trigger factor [Succinatimonas hippei YIT 12066]
Length = 437
Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats.
Identities = 93/451 (20%), Positives = 188/451 (41%), Gaps = 18/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGLKR + V +P+ ++ + + + A I GFR G VP S ++ YG
Sbjct: 1 MQVSIENKEGLKRLVSVTVPAEEFKKAYTQELRKVAKTARIDGFRKGHVPTSVLEKYYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I+ E +I + + L + + P ITI + D ++
Sbjct: 61 NIIGEASSSVINSSLVKALQENNLDVPGMPEITIKTC---------DLGQDFVYEAVCEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYTV 179
P++ + +LQ+ + E+ E +I+ + + + ++V + E+ V +D+
Sbjct: 112 SPEVAVKPLSELQIEKVNAEITEDDINDMIETLRQQQAKWKVVDDGEANKDSLVKIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD E ++ +GS + +E +VG K GD+ I+ FPED+ ++L GK
Sbjct: 172 RVDGAPFEGGKAEDFSLHLGSGRMIPGFSEQIVGHKAGDKFTIQVKFPEDYHAENLKGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ V + VN D G + R + +++ + V QK +
Sbjct: 232 AEFDITVNSVSEQVLPEVNEDFVKLFGVKDGSMETFRKDLRRNMERELKRAVTQKNASNV 291
Query: 298 LDYISNKY-TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ +S +Y FDVP++ V+ E + ++ + E + + A
Sbjct: 292 YEAVSKQYGEFDVPKAAVDAEIKRLRERTEANFRRYGM-----TRLPELKDEVFQEEALH 346
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
G + I +E ++ + + + ++++ + ++ +
Sbjct: 347 DARLGYAIRAIVADLKLEKADDATVNDNLAMIADAYENPEEVIKQLRADKQQMSYIMNKS 406
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
FED V+ IL + Q+ D K +F +L N+ +
Sbjct: 407 FEDDVVKAILANAQVTDVKKSFKELIGNNQQ 437
>gi|85713353|ref|ZP_01044367.1| trigger factor [Idiomarina baltica OS145]
gi|85692820|gb|EAQ30804.1| trigger factor [Idiomarina baltica OS145]
Length = 423
Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats.
Identities = 78/437 (17%), Positives = 206/437 (47%), Gaps = 18/437 (4%)
Query: 10 GLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDE 69
GL+R + + +P++ + + +++ + GFR GK+P ++ L+G+ S
Sbjct: 1 GLERRVTITVPADVIDNEVKRLLKEEYRHRRVNGFRKGKIPPHVLQKLFGREARSRAASG 60
Query: 70 IIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSF 129
+++ E + + A P+I + E DL+ ++++ P++E+ +
Sbjct: 61 VMQSKYYEAIMQEKINPAGAPAIEPK---------VNEPGKDLEFTATFEVYPEVEVKNL 111
Query: 130 DDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQ 189
D +++ + EV + ++D + + K + ++ + +S+ GD+VT+D+ S+D E
Sbjct: 112 DKIEIEKPTVEVTDADVDSMLETLRKQHAGWKEVKRKSKDGDRVTMDFVGSIDGEEFEGG 171
Query: 190 SKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEV 249
+ +G + + + G+K G++K IE FPED+ ++L GK + + K++
Sbjct: 172 KASDFALELGEGRMIPGFEDQIKGIKAGEEKTIEVTFPEDYHAENLKGKDAQFAVTAKKI 231
Query: 250 FSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
+N++ G + A++ + +++ V+ KVK Q+L I
Sbjct: 232 EERELPELNDEFVALFGVKEGGVDALKAEVRKNMERELSNTVKSKVKEQVLKGIVEHNEV 291
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTI 367
++P+++++ E + + ++ N + + + + AK RV G++LG +
Sbjct: 292 ELPKAMIDQEIDALRKQAAERFGG------NAEQMPNLPAELFEEQAKERVKVGLLLGEV 345
Query: 368 GEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILK 427
N ++ +E + + + ++++++++ + + ++R E++ ++ +L
Sbjct: 346 IRTNEMKAEDERVDT-IIANAASAYEDPQEVIEYYKSNNDMMQQIRNVALEEQAVEFVLD 404
Query: 428 SVQIVDRKVTFDQLFDN 444
++ +++ +FD + +
Sbjct: 405 KAKVTEKEASFDDIMNP 421
>gi|190573021|ref|YP_001970866.1| trigger factor [Stenotrophomonas maltophilia K279a]
gi|229558466|sp|B2FQR1|TIG_STRMK RecName: Full=Trigger factor; Short=TF
gi|190010943|emb|CAQ44552.1| putative trigger factor [Stenotrophomonas maltophilia K279a]
Length = 431
Score = 219 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 91/447 (20%), Positives = 192/447 (42%), Gaps = 19/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + L+R L +P +RL R+ +I IKGFRPGKVP I+ +G
Sbjct: 1 MQASIESTGNLERRLSFSLPEDRLQSHIVGRLGEIARTTRIKGFRPGKVPAKVIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E +D +++E + + D R P I + + ++
Sbjct: 61 QVRGEALDGLLRETFDAAVREHDLRIVGSPRIDKG------------DEGEFSFVATVEV 108
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + E+ + +ID+ + + + ++ GD V V+
Sbjct: 109 VPDFGDIDVSKLTVVRHTAEITDADIDQMIENLQNQRRTWAPVSRGAQDGDLVAVETWSQ 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
L + + ++G +F + LVGL G++K ++ FP D + LAGK V
Sbjct: 169 AGEERLPAEGTEKGSIVLGQGMMFETIEKGLVGLAKGEEKTLDVEFPADWRVPVLAGKTV 228
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + EV P+ V+ G + R +++ + + +++R++
Sbjct: 229 QVTVKVAEVSEPVVPAVDEAFIKSFGVKGGDVEQFRSDIRANLERELKGALMNRLRREVG 288
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ + ++P LVENE +L + ++ Q+V I + + + A +R
Sbjct: 289 EQLIAAYSSVEMPPRLVENEARAMLAQQVEQIRRNG---QSVGEIPADAHEGFKEAAAKR 345
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G + N++ + + + + + +++++ ++ P ++ L+ +
Sbjct: 346 VLVGLLVGEVARINDLRLEAKRLNETMRLIASTY-EEPEQVIEMYRNDPQLMSGLQNRVM 404
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDN 444
E++VID I + Q + K++F
Sbjct: 405 EEQVIDWIAERAQHTEEKLSFQDAIRQ 431
>gi|319778294|ref|YP_004129207.1| Cell division trigger factor [Taylorella equigenitalis MCE9]
gi|317108318|gb|ADU91064.1| Cell division trigger factor [Taylorella equigenitalis MCE9]
Length = 439
Score = 219 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 98/444 (22%), Positives = 215/444 (48%), Gaps = 14/444 (3%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ +GLKR++++ + + D+ ++ I A ++GFRPGK PL I+ +G S+
Sbjct: 8 KIEKLDGLKRQIELRVSQKAVDDAAQSELKRIAKTAKVQGFRPGKAPLKMIEQSHGPSVR 67
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E +++ + + + I+ ++D R A RP I EGE+ T D +++ P+
Sbjct: 68 YEALNKQVVDELDRIVREQDLRIAGRPDIKPKEGET--------STEDFVFLADFEVYPE 119
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
+++ + T+ E+ + EI+ + + K F + S+ D+VTVD+T +D
Sbjct: 120 VDLGDVGSMNFTKFKSELGDSEINETIEILRKQRTKFNKVDRASQDQDRVTVDFTGKIDG 179
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
V E ++ F++G + E E GLK G++K FPED+ K++AGK
Sbjct: 180 VEFEGGKAESFPFVLGVGAMLPEFEEAAKGLKAGEEKTFSLAFPEDYHGKEVAGKTAEFT 239
Query: 244 FSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++KEV P+ VN + A LG + ++ +++ + + + K+ + D +
Sbjct: 240 LNMKEVAEPVLPEVNEEFAKSLGQKDGDVEKLKEEIKANLERETNARLLSRTKKSVWDEL 299
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
++K +VP++LV+ E + +R +++ + + I+ + + + RRV G
Sbjct: 300 ASKVEMEVPKALVDREIEDHIATIRKQLAQTKTPNADTLPIEG---ETFRDESSRRVKLG 356
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+++ I + +++ T E++++ + + + ++ + + A + + + ED V
Sbjct: 357 LIVAHIVDTEDVKPTMEQVRARIEEISKNY-EKPQEFVAYCLSNREARSNIENSVLEDNV 415
Query: 422 IDHILKSVQIVDRKVTFDQLFDNS 445
+++ L ++ + + F +L
Sbjct: 416 VEYFLSKGKVTEESIPFKELMGQQ 439
>gi|253996691|ref|YP_003048755.1| trigger factor [Methylotenera mobilis JLW8]
gi|253983370|gb|ACT48228.1| trigger factor [Methylotenera mobilis JLW8]
Length = 434
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 96/447 (21%), Positives = 187/447 (41%), Gaps = 15/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L+R + + +P L +R+ + A GFRPGK P+ + YG
Sbjct: 1 MALNVETLSNLERRISISVPLQPLEAQIKQRLNQVARTAKFSGFRPGKAPMGLVNQHYGN 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E +++ E + + R A P+I + L+ ++++
Sbjct: 61 QVRDEVYSAAVEKSFGEAVDEAKLRVAGFPNI--------QHKPFDAASETLEYTATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + +++ + + EV E ++ + + + K V FE + ++ GD+V V
Sbjct: 113 FPEVVLGDLSKVKIERPVLEVGEADVKKTLDVLVKQRVKFEPVKRAAKKGDRVNVTLKAF 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D +E + ++G A S + L+G KTG K+ + +PEDH+ LAGK V
Sbjct: 173 MDGEEVESTGDNGIDLVLGEAGRMSAFDDELIGGKTGATKKFDITYPEDHNPAQLAGKTV 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ V P+ V+ + A LG E M+ ++ +KQ V K+K Q+
Sbjct: 233 GYEVTFVSVSQPVLPEVDAEFAKSLGVEDGDVEKMKAEVAESLKQEVAKRVSAKLKEQVF 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ FD+P L+E E N ++Q + + N+ AKR
Sbjct: 293 QALVESADFDIPRILLETEINRMMQTTQQNLKQRGADLANIQLEPAMF----EDQAKRST 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++LG + N + +++++ + + ++ + L E A E
Sbjct: 349 KLRLLLGELINTNGLHANADQVRA-MVDVFSQSFERPADVVTWYYADHKRLDEPAALATE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
+ + +L ++ D+KV FD L N+
Sbjct: 408 ENAVSWVLSQAKVTDKKVKFDDLMGNA 434
>gi|294812619|ref|ZP_06771262.1| Trigger factor [Streptomyces clavuligerus ATCC 27064]
gi|294325218|gb|EFG06861.1| Trigger factor [Streptomyces clavuligerus ATCC 27064]
Length = 512
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 90/476 (18%), Positives = 190/476 (39%), Gaps = 24/476 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+ + + L V +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 48 KSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGRG 107
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L E +++ + ++ E +++ + +P + I E ++ L DI
Sbjct: 108 AVLEEAVNDALPKLYTEAVNEAEISPLGQPEVDITE---------LKDGETLNFTAEVDI 158
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P IEI + +++T D EV ++++++ + E+ + E + GD +TVD
Sbjct: 159 RPTIEIPDYSGIEITVDAIEVTDEDVEKAVEELRGRFASTTPVERAAGDGDVITVDLEAK 218
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD +L+D + V + +GS +L E + GL+ G E F AGK
Sbjct: 219 VDGEVLQDGVAEGVSYTIGSGELLDGIDEAVKGLEAG----GEATFTSQLKGGSAAGKDA 274
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + V +++D A F++ ++ +++ ++ + + ++L+
Sbjct: 275 EVTVKVTAVAQRELPELDDDFAQLASEFDTLEELKADSRKRLTTMKQYDQATQAQERVLE 334
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-----QKSQNVDSIDEEDLQYYHMLA 354
+ +PE L+E+E N + + + EE A
Sbjct: 335 ELLKLVEIPMPEKLLEDEVNTRKHNLEHHQLGQMGLDLAKYLEIQGKSQEEFDTETQEAA 394
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + T +L + K + V +EE+ L ++ + + N + L
Sbjct: 395 VKGIKTQFILDELVSKEQLNVNQEELTEHLMRRAASSGMSPDQFAKAVVE-GNQVQVLVG 453
Query: 415 PIFEDKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEE 467
+ K + +++S ++VD V D + E++ E + E E+
Sbjct: 454 EVARGKALALVVESAKVVDTNGETVDMSDDEDETVEAAAETVESVVDGDEAKGEEK 509
>gi|319440932|ref|ZP_07990088.1| trigger factor [Corynebacterium variabile DSM 44702]
Length = 452
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 85/466 (18%), Positives = 198/466 (42%), Gaps = 23/466 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P + L F+ +++ + ++ GFR GKVP +++ G+
Sbjct: 1 MKSSVESLSATRVKLTVEVPFDELKPEFDNAFKNLAQQVSLPGFRKGKVPAKILEARLGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+IL+E +++++ E + + D + +P I I E +E + D
Sbjct: 61 PAILNEVLNDMLPSRYGEAVQEHDLKVLGQPDIDIAE---------LEDNDHVTFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ F + V D E D + +D ++ + + E GD V++D +
Sbjct: 112 VRPEIEVPDFAGIAVEIDAVEADAEAVDHELGHLQARFGTLKPVERAVADGDFVSIDMSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D ++D + + + + VG+ L E L+GL G+ KE + A
Sbjct: 172 TIDGETVDDATTEGLSYEVGTGSLVEGLDEALIGLSEGESKEFTSKLVAGEHTDENA--- 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++K V +++D A F++ +R ++++ + ++ ++L
Sbjct: 229 -EVSVTVKSVKERELPELDDDFAQLASEFDTVEELRESIKGQVEEQLKGQQATDIRDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLA 354
+ +PES+V+ + +G +Q++ + + + + + E+ + A
Sbjct: 288 AAALEQTEVPLPESVVQEQVDGQMQQLLSQFGGDEKIFEQMLAAQDITREKFEEDAREAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V T + L ++ + EV+++E+ + R+ + + Q+ +A L A
Sbjct: 348 EDSVRTQLFLDSVADIEKPEVSQQELTDHIMFTAQRYGMDPNQFVMQLQQS-GQIANLFA 406
Query: 415 PIFEDKVIDHILKSVQIVDRK---VTFDQLFDNSSESSPEKLLDKS 457
+ K + + V + D K V + F + + + D
Sbjct: 407 DVRRGKALALNICKVTVTDSKGASVDPKEFFGEEAGEAEVEATDAE 452
>gi|329296781|ref|ZP_08254117.1| trigger factor [Plautia stali symbiont]
Length = 407
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 86/423 (20%), Positives = 190/423 (44%), Gaps = 18/423 (4%)
Query: 28 FNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAA 87
+ + ++ K I GFR GKVP + I YG S+ + + E++ + + K A
Sbjct: 1 MKKELVEVAKKVRIDGFRKGKVPATIINQRYGASVRQDVLSELMTRNFVDAIIKEKINPA 60
Query: 88 MRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEID 147
P+ G + D + +++ P++E+ D ++V + + EV + ++D
Sbjct: 61 GAPN---------YVPGEYKEGEDFTYAVEFEVYPEVELKGLDAIEVEKPVVEVTDADVD 111
Query: 148 RQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSET 207
+ + K ++ + + D+ T+D+T SVD E + + +
Sbjct: 112 TMLETLQKQQATWKETDAAASAEDRATIDFTGSVDGEEFEGGKASDFVLAMVQGRMILGF 171
Query: 208 TEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF 267
E + G K GD I+ FP+D+ ++L GK + N +K+V + + + R G
Sbjct: 172 EEGITGKKAGDTFNIDVKFPDDYHAENLKGKDAKFNIVLKKVETRELPELTAEFIKRFGV 231
Query: 268 ES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKV 325
E +R + +++ + +R +VK Q +D + N DVP +L+++E + + ++
Sbjct: 232 EDGSIEGLRAEVRKNMERELKGAIRNRVKTQAIDGLVNANEIDVPVALIDSEIDVLRRQA 291
Query: 326 RFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALY 385
N E + + AKRRV+ G++LG + N ++ E+ +++ +
Sbjct: 292 AQRFGG------NEKQALELPRELFEEQAKRRVVVGLLLGEVIRINELKADEDRVKALIE 345
Query: 386 QQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
+ F +++++ + K + +R E++ ++ +L ++ D+ F +L + +
Sbjct: 346 EMASAF-EDPQEVIEFYSKNSELMNNMRNVALEEQAVEAVLAKAKVTDKATNFQELMNQT 404
Query: 446 SES 448
S +
Sbjct: 405 SAA 407
>gi|300788578|ref|YP_003768869.1| trigger factor [Amycolatopsis mediterranei U32]
gi|299798092|gb|ADJ48467.1| trigger factor [Amycolatopsis mediterranei U32]
Length = 463
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 90/478 (18%), Positives = 196/478 (41%), Gaps = 24/478 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +++V +P + L +F+ I + I GFRPGK P ++S G+
Sbjct: 1 MKSTVEQLSPTRVKINVEVPFDELKPNFDRAYRKIAQQVRIPGFRPGKAPARVLESRIGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++E I E + + R P + + +E L+ D
Sbjct: 61 GPVLDEVVNEAIPAKYIEAVRANEVRTLGNPEFDVTK---------LEDRDVLEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ D +T D E+ + E++ Q+ E+ E +E GD V++D
Sbjct: 112 VRPEIELPDLDGFAITVDDVELTDAEVEEQLDELRARFGTLTGVERPAETGDFVSIDLAA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD +E+ S + + +GS L E +VG G+ K + AGK
Sbjct: 172 AVDGEAVEEASTSGLSYEIGSGQLVDGIDEAIVGASAGETKTFTTQLVAG----EHAGKD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V + +++ A + F++ ++ +++ + + + + ++L
Sbjct: 228 AEVTVTVQSVKTRELPEADDEFAQMASEFDTIEELKNDLRERLGRVKKMQQGVQARDKVL 287
Query: 299 DYISNKYTFDVP----ESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
D + + +P ++ +EN + + + + Q + EE +
Sbjct: 288 DELLERTEVPIPEKVLDAEIENRKHDAIHPFDHDEAQFAQALEAEGRTLEEFDAETRTES 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V T ++L TI +K + V + E+ + Q RF + + Q+ L + A
Sbjct: 348 EKAVRTQLLLDTIADKEEVSVNDGELTERIIYQAQRFGISPDEYVQRAQQS-GQLTAIYA 406
Query: 415 PIFEDKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+ K + +++ + D +V +LF S E + + +++ + A
Sbjct: 407 DVRRGKALASVVRKATVTDGSGAEVDLSELFG-SDEPAVDAATEETQVTDETAKTPAE 463
>gi|330814220|ref|YP_004358459.1| cell division trigger factor [Candidatus Pelagibacter sp. IMCC9063]
gi|327487315|gb|AEA81720.1| cell division trigger factor [Candidatus Pelagibacter sp. IMCC9063]
Length = 483
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 119/481 (24%), Positives = 242/481 (50%), Gaps = 18/481 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V S+ L+ L +++ + R+ ++++ N+KGFRPGK P+ +K +G
Sbjct: 1 MKVTVTSSKKLQSTLKIVVEKKEIDAKIEVRLSELKNTINLKGFRPGKAPMELLKKQFGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E +++++E + L +++ A +P I + D +L+ ++ +
Sbjct: 61 SVYGEVAEKLLQESTFQALKEQNITPASQPKIDVQTSGED---------KNLEFTVTVEQ 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P+I+ F+ + + + + D+KEI++++ IA++N + K+ ++ D V ++ +
Sbjct: 112 VPEIKKIDFEKITLNKYEVKSDKKEIEQRLKGIAESNKKYVDKKDKAANDDMVVFNFEAT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V+ E + +Q ++G + ++G K GD+K + PE++ K+LAGK
Sbjct: 172 VEGKPFEGNKGEKLQIVLGKDLFIPGFDKQMIGSKQGDEKVAKVKLPENYPNKELAGKPA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
I EV P +++ A G + + + +I + E + Q +K++ILD
Sbjct: 232 EFKCKIVEVKKPEDQKIDDAFAKNFGAKDLKDLESMIGNQISKEYESVTDQLLKKEILDD 291
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSS---------ANQKSQNVDSIDEEDLQYYH 351
+ K+TFD+P+ L+++E + + E + ++ + + + D Q
Sbjct: 292 LDKKFTFDLPKGLLDDEVQNVEHSLVHEKMNELKAKGEKFKHEHDHDKIKLSDSDKQTAL 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+AKRRV ++L GE+NNI+VT EE++ L +QL +PG EK + D +QK P L +
Sbjct: 352 KIAKRRVKLALLLNKTGEENNIKVTPEELKMELEKQLRNYPGQEKNIRDFYQKNPAELTK 411
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
L+ P+FEDKV++ I +IV + ++ ++L + + K+S +T +
Sbjct: 412 LKGPVFEDKVVELIKSKGKIVTKVMSKEELLKLFNNIGEDSEKKKTSASKTKEKVAPSKN 471
Query: 472 I 472
+
Sbjct: 472 V 472
>gi|292670227|ref|ZP_06603653.1| trigger factor [Selenomonas noxia ATCC 43541]
gi|292648179|gb|EFF66151.1| trigger factor [Selenomonas noxia ATCC 43541]
Length = 460
Score = 217 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 82/438 (18%), Positives = 185/438 (42%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E + L + + ++L + + + I + NI GFR GK P +++ GK
Sbjct: 32 MKVTAEHGENREVTLTIEVDQDKLEKATDSAAKRISGRVNIPGFRKGKAPRRIVENFVGK 91
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E + + ++ + L+++D RP I I +E ++ +
Sbjct: 92 EAILQEAFERLAQQAFEDALTEQDMEPVTRPEIDIVT---------LEEGKNVIFTAKFT 142
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P++ + + L V + V ++++DRQ+ + +N + + D VT+D+
Sbjct: 143 QRPEVALGDYKGLAVEKQEIVVADEDVDRQIEGMRQNQGTLVDAPADAAVKKDDFVTLDF 202
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD + ++ +GS + L+G K G+++E+ FPE++ ++L G
Sbjct: 203 EGFVDGKPFKGGKGEDYPLQIGSGSFIPGFEDQLIGAKIGEEREVNVTFPEEYHAEELKG 262
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K +I+ + S +N+ A + FE+ + +R + ++ +E + +
Sbjct: 263 KPALFKCTIRSIKSRELPELNDAFAKKASKFETLAELREDIRKNLQAGAERQAEADRRAK 322
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+D ++ T ++P +VEN ++Q++ + + Y
Sbjct: 323 AIDMATDNCTMEIPPIMVENRITAMIQEMAMRLEQQGMSLEQYLQYAGLDMARIRDEYRE 382
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V T ++L + + I+V ++ +Y + K++ K +++L
Sbjct: 383 AAEKNVRTDLMLEEVAKAEGIKVEGRDLDQEVYAMAISYGATPKQV-QKIIKEQGRVSDL 441
Query: 413 RAPIFEDKVIDHILKSVQ 430
A + K I+ ++
Sbjct: 442 AATVLRKKTAQFIVDNIT 459
>gi|54023299|ref|YP_117541.1| trigger factor [Nocardia farcinica IFM 10152]
gi|67461689|sp|Q5Z064|TIG_NOCFA RecName: Full=Trigger factor; Short=TF
gi|54014807|dbj|BAD56177.1| putative peptidyl-prolyl cis-trans isomerase [Nocardia farcinica
IFM 10152]
Length = 465
Score = 216 bits (550), Expect = 5e-54, Method: Composition-based stats.
Identities = 87/476 (18%), Positives = 196/476 (41%), Gaps = 20/476 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+ + + ++V +P L F+ + + + I GFRPGK P +++ G+
Sbjct: 4 KSTVEQLSPTRVRINVEVPFEELKPDFDRAYKALAKQVRIPGFRPGKAPAKLLEARLGRG 63
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+IL + +++++ E ++ + + +P I I + IE + D+
Sbjct: 64 AILEQVVNDVLPARYSEAVTTSEVKVIGQPDIEITK---------IEDGQEFAFSAEVDV 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I + + DL+VT D + +++I+ Q+ + + E + GD V++D + +
Sbjct: 115 RPEIALPDYADLEVTVDAFTIGDEDIEEQLNSLRQRFGTLTGVERPVQEGDFVSIDLSAT 174
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + + S + VGS L E L+GL G+ KE + AGK+
Sbjct: 175 VDGQEVPEASTTGLSHEVGSGQLIEGLDEALIGLSAGESKEFTSTLVAG----EHAGKEA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ +++ V +++ A F++ ++ ++++ + +++ ++L+
Sbjct: 231 VITVTVQSVKERELPEADDEFAQLASEFDTLEELKADLRSRVERVKKVQQAGEIRDKVLE 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE----EDLQYYHMLAK 355
+ K +PE +V+ E + +L K E + A+
Sbjct: 291 ALLEKTEVPLPEKVVQAEIDAVLHDAVHGFDHDEAKLAEALEAQGSSRAEFDKDTKEAAE 350
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ V T ++L I E +V +EE+ + Q R+ ++ + Q+ L + A
Sbjct: 351 KSVKTQLLLDAIAEAEGTQVGQEELTERILFQAQRYGMAPEQFIQQVQQ-AGQLGAVFAD 409
Query: 416 IFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ K + ++ V++ D + + E + E +++ + A SE
Sbjct: 410 VRRGKALAGVVGKVKVTDSEGNTVDTAEMFGEPAAEPEQADAAQAGDAEKAAADSE 465
>gi|296170470|ref|ZP_06852058.1| trigger factor [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894941|gb|EFG74662.1| trigger factor [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 463
Score = 216 bits (550), Expect = 6e-54, Method: Composition-based stats.
Identities = 71/456 (15%), Positives = 185/456 (40%), Gaps = 23/456 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F ++ + + GFRPGK P +++ +G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFAELEPDFQRAYRELAKQVRLPGFRPGKAPAKLLEARFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + ++E + + + + + +P I + + E +L D
Sbjct: 61 EALLDQVVNEALPARYGQAVVDSEVQPLGQPDIEVTKK---------EYGQELAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ L+++ D EV ++++D ++ + + GD V++D +
Sbjct: 112 VRPKIELPDLGALKISVDPVEVSDEDVDAELESLRARFGTLTGVDRPVATGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + + + + VGS L + + LVGL + +E + AG+
Sbjct: 172 TIDGEEVPGAAAEGLSHEVGSGRLIAGLDDALVGLSVDESREFTAQLAAG----EHAGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +++ + +++ A F++ +R ++ Q +++ L
Sbjct: 228 AQVTVTVRSIKQRELPEPDDEFAQLASEFDTIEELRSNLRDQVGQVKRAQQADRIRNAAL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN----VDSIDEEDLQYYHMLA 354
D + + +PE++V+ +Y+ + + + K +E A
Sbjct: 288 DTLLEQVDVPLPEAIVQAQYDSTMHDALHGLDHDDAKLDEALAGQGKTRDEFETETRAAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V ++L + ++ ++V ++++ L ++ +++L + Q+ N L + A
Sbjct: 348 ETDVKRQLLLDALADQLEVQVGQDDLTERLVMTSRQYGIEPQQLLGYLQEN-NQLPAMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSE 447
+ I ++++ + D + + F SE
Sbjct: 407 DVRRGLAIAEVVRAATVTDTAGNTIDTGEFFGKRSE 442
>gi|296139183|ref|YP_003646426.1| trigger factor [Tsukamurella paurometabola DSM 20162]
gi|296027317|gb|ADG78087.1| trigger factor [Tsukamurella paurometabola DSM 20162]
Length = 461
Score = 216 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 88/477 (18%), Positives = 206/477 (43%), Gaps = 25/477 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P + L F E + + NI GFR GK P I++ G+
Sbjct: 1 MKSTVEQLSPTRVRLSVEVPFDELAPDFERAYEALAQQVNIPGFRKGKAPAKLIEARVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++LS+ I++ + + + + +A +P I I + +E L D
Sbjct: 61 DAVLSQVINDALPGKYSQAVLDSEVKALGQPEIDIEK---------LEYGEALSFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++ + + ++V EV + +++ Q+ + + + + GD VT+D +
Sbjct: 112 VRPEVTLPEYSGIEVEVPSLEVTDADVEEQLDGLRARFGTLKGVDRPVQEGDFVTIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD +ED + VGS +L E +VGLK+G+ K+ + + AG++
Sbjct: 172 TVDGKDVEDAKTTGLSHEVGSGNLIDGLDEAIVGLKSGESKQFT----TNLVAGEFAGQE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ V ++++ A F++ +R +++Q+ + +++ +L
Sbjct: 228 AEVTVTVDSVKERELPELDDEFAQLASEFDTVDELRDDLRGRVEQNKKLSQAAEIRDAVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----A 354
+ + +PE++V+ + + + V ++ + + + + A
Sbjct: 288 EKLIEATEIPLPEAVVKEQADANVHDVLHQVGHNEELLETALKAQGTSREEFEKQAQESA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+++V ++L I + +++V ++E+Q + Q R+ ++ + Q+ L L
Sbjct: 348 EKQVKVQLLLDAIADAQDVQVDQQELQEHILFQSQRYGMQPQEFIAQIQQ-AGQLPALFQ 406
Query: 415 PIFEDKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEA 468
+ K + ++ V++VD V LF E + E S++ E+ +++E
Sbjct: 407 EVRRGKGLADVVLEVKVVDADGNPVDTKALF--DREDADEAPEADSAEAESTEADEK 461
>gi|158317031|ref|YP_001509539.1| trigger factor [Frankia sp. EAN1pec]
gi|238686836|sp|A8L1X3|TIG_FRASN RecName: Full=Trigger factor; Short=TF
gi|158112436|gb|ABW14633.1| trigger factor [Frankia sp. EAN1pec]
Length = 507
Score = 216 bits (548), Expect = 8e-54, Method: Composition-based stats.
Identities = 82/475 (17%), Positives = 186/475 (39%), Gaps = 21/475 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ ++ + +L V +P + L S + + + + GFRPGKVP + G+
Sbjct: 1 MKATKETLSPTRVKLTVEVPFDELKPSVDATYRKLARQVRVSGFRPGKVPPRILDQRLGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E I E + + E + + RP + I E L D
Sbjct: 61 GVILDEAIQEALPRLYSEAVQAEEVDVLSRPEVDITE---------FADGAQLVFTAEMD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++ + F +L++ + V +++++ + + + E + GD V++D +
Sbjct: 112 VRPEVTLPEFGELELVVEPATVTDEQVEEHLTNLRDRFAVLKPVERPVQEGDFVSLDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
SVD +ED + + + VGS +L E + G GD++ + + + G+
Sbjct: 172 SVDGEAIEDATATGMSYEVGSGNLIDGIDEAIAGASDGDERTFD----TELLAGEYTGRT 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++ V +++D A F++ +R +++ + + + + ++L
Sbjct: 228 AQVTAVVRGVKEKELPELDDDFATTASEFDTLEELRADVRTRLESNRKVEQLGEARDKML 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLA 354
D + VP+S++ E ++ E+ + + EE A
Sbjct: 288 DKLIELVEVPVPDSVLAGELEAREHRLGHELEHIGTDRATYLETLGQSAEEFDAEVRSSA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + + +L + + +I + + E+ + + R + + L L A
Sbjct: 348 GKAIRSQFILDAVIDAESIGLDQGELMEQILMRAQRAGVQPDQYAQQLAQ-GEGLTALMA 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+ K + +L++ ++VD + +L + S E D + +EE
Sbjct: 407 DVLRTKALFLLLENAKVVDTEGNAVEL-NLPRRPSGEAEDDVRDISDELDAEELE 460
>gi|227503933|ref|ZP_03933982.1| trigger factor [Corynebacterium striatum ATCC 6940]
gi|227199455|gb|EEI79503.1| trigger factor [Corynebacterium striatum ATCC 6940]
Length = 516
Score = 216 bits (548), Expect = 9e-54, Method: Composition-based stats.
Identities = 76/465 (16%), Positives = 186/465 (40%), Gaps = 23/465 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + +L V +P L ++ I + +I GFR GK P I + +G+
Sbjct: 66 KTTVDKLSDTRVKLTVNVPFAELDKEIDQAYAAIAQQVSIPGFRKGKAPRQLIDARFGRG 125
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
IL + +++++ + + + + +P + I IE ++ D+
Sbjct: 126 PILEQVVNDMLPTRYEQAVQENELNVIGQPDVDI---------SKIEDNDFVEFTAEVDV 176
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I + F L VT E ++++D+ + E+A + + + + GD +D
Sbjct: 177 RPEITVPDFSKLSVTVPAIEAKDEDVDKALEELASRFGELKDTKRKMKTGDFAIIDIVAE 236
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D L++ S + + + +G DL L G+KT + E D AG++
Sbjct: 237 IDGTKLDEASYEGMSYQIGDDDLIKGLDTALRGMKTDEDTEFTSTIQSG----DHAGEEA 292
Query: 241 RLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ +++ ++++ A + F++ +R ++++ + ++ ++L
Sbjct: 293 TIKVHVQQTKERKLPDLDDEFAQMASEFDTMDELRESTKTRVEESKKAEQAANIRDEVLK 352
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAK 355
F++P ++V+ + + L ++ +++ + + E+ + A+
Sbjct: 353 AALEGTEFELPTAVVDEQVHAQLHQILGQLAHDEKALAQLLEAQGTTREDFDKEARESAE 412
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
V T + L + ++ EV+++E+ + + + + Q +A L +
Sbjct: 413 ESVRTQLFLDAVADEEQPEVSQQELTDHILFTAQSYGMDPNQFIQQLQSN-GQIANLFSD 471
Query: 416 IFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKS 457
+ K + + V + D KV +Q F E E ++
Sbjct: 472 VRRGKALAAAICRVDVKDEDGNKVDVEQYFGEIEEEGAEDATEEK 516
>gi|183983783|ref|YP_001852074.1| trigger factor (TF) protein TIG [Mycobacterium marinum M]
gi|238690941|sp|B2HNG6|TIG_MYCMM RecName: Full=Trigger factor; Short=TF
gi|183177109|gb|ACC42219.1| trigger factor (TF) protein Tig [Mycobacterium marinum M]
Length = 484
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 76/482 (15%), Positives = 193/482 (40%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + V +P L F +++ + + GFRPG+ P+ +++ +G+
Sbjct: 1 MKSSVEQLSPTRVRIKVEVPFAELEPDFQRAYKELAKQVRLPGFRPGRAPVKLLEARFGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +++ + + L++ + + RP I + + E DL D
Sbjct: 61 EAMLDQIVNDAVPSRYGQALAESEIQPLGRPDIEVTQK---------EYGQDLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + L V+ D E + E++ ++ + E GD +++D +
Sbjct: 112 VRPEIALPDLTGLSVSVDAIEATDDEVNAELESLRARFGTLTEVERPVATGDFISIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + + VGS L + + +VGL + + D AG+
Sbjct: 172 AVDGEDVPNAAAEGLSHEVGSGRLIAGLDDAVVGLSVDESRVFTAKLAAG----DHAGRD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V +++ A F++ +R +++ Q ++++ +
Sbjct: 228 AEVTVTVKSVKERELPEPDDEFAQLASEFDTIDELRASLREQVLQAKRVGQAEQIRNATI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQK----VRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
D + + PES V+ +Y G+L + + + N+ S + +
Sbjct: 288 DALLERVDVPTPESYVQAQYEGVLHSALSGINNDEARFNELLVEQGSSRDAFDAEARTAS 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V ++L + + ++V +E++ L ++ +++ + Q+ N L + A
Sbjct: 348 EKDVKRQLLLDALADDLKVQVGQEDLTERLVLTSRQYGIEPQQLFAYLQEN-NQLPSMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ + + + ++ + D + + F E+ LLD + + + +E
Sbjct: 407 DVRRELAVKAVAQAATVTDTDGNTIDTSEFFGKPPENDVTDLLDDDADGDAGVDADGDTE 466
Query: 472 IS 473
S
Sbjct: 467 NS 468
>gi|254774528|ref|ZP_05216044.1| trigger factor [Mycobacterium avium subsp. avium ATCC 25291]
Length = 464
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 71/478 (14%), Positives = 191/478 (39%), Gaps = 23/478 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F +++ + + GFRPGK P +++ +G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFAELEPDFQRAYKELAKQVRLPGFRPGKAPAKLLEARFGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + E + + +++ + +P I + + E +L D
Sbjct: 61 EAMLDQVVTEALPARYGQAVAESEVHPLGQPEIEVTKK---------EYGQELAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++ + L+++ D EV ++++D ++ + E GD V++D +
Sbjct: 112 VRPELNLPDPGALKISVDPIEVTDEDVDAELQSLRARFGTLTGVERPVAEGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + + + + VGS L E L+G+ + +E + AG+
Sbjct: 172 TIDGQEVPGATAQGLSHEVGSGRLIEGLDEALIGMSVDESREFTTKLVSG----EHAGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++K V +++ A F++ +R +++ + ++++ +
Sbjct: 228 AQVTVTVKSVKERELPGPDDEFAQLASEFDTIDELRANLREQVGRVKRAQQAERIRDAAI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----A 354
D + + +PE++V+ + + L ++ K + V + + + + A
Sbjct: 288 DTLLEQVDIPLPEAIVKAQVDSALHGALHSLNHDESKLEEVLAQQGKSREEFENETRTAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V ++L + +K ++V +E++ L ++ +++L + Q+ N L + A
Sbjct: 348 ETDVKKQLLLDALADKLQVQVGQEDLTERLVATSRQYGIEPQQLLAYLQEN-NQLPAMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+ I ++++ + D + + F D ET ++
Sbjct: 407 DVRRALAIAEVIRAATVTDTAGNTIDTSEFFGKRPSGDGAADEDADQADETTTADAGE 464
>gi|256396402|ref|YP_003117966.1| trigger factor [Catenulispora acidiphila DSM 44928]
gi|256362628|gb|ACU76125.1| trigger factor [Catenulispora acidiphila DSM 44928]
Length = 466
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 86/473 (18%), Positives = 190/473 (40%), Gaps = 20/473 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + L V +P L S + + I + +I GFR GKVP + I +G+
Sbjct: 1 MKSAVETLDPTRVRLTVEVPFEELKPSLDAAYKKIAEQVSIPGFRKGKVPAAVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ L E I+ + + + + +P + + E +E DLK D
Sbjct: 61 GAALEEAINSSLPQFYGQAVEDNKIEVVGQPDVDLKE---------LEPGQDLKFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ ++ ++DD++V + V E+ + ++ EI K + + E E GD VT+D
Sbjct: 112 VRPEFDVPAYDDIEVEVEDAAVAEEAVAERIEEIRKRFGSLKEVEREVADGDFVTLDLAA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
S+D +LED + K + + VGS L T E ++G K G+ F AG+
Sbjct: 172 SIDGEVLEDGTAKGMSYEVGSTQLIEGTDEAIIGKKAGET----ATFTSKLLGGSHAGED 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ V ++++ A F++ R + +++ +F + ++L
Sbjct: 228 ATIEVTVSAVKERELPELDDEFAQLASEFDTMEEFRANVRETLERSEQFEQVASARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH----MLA 354
+ + + +P+S+V++E + + +++ + + E+ + Y
Sbjct: 288 EVLLERVEIPLPKSVVDSELAWRNEALDRQIAMGGMTREGFFKLQEKTEEEYDAELAEEV 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V +L + I V E E+ + L Q+ + + + L
Sbjct: 348 RDGVKAQFILDKLANAEEISVNEGELTNHLIQRAQQAGMRPDEFAQQI-SSAGQIPALVG 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEE 467
+ K ++ +L++ ++ D + ++ + + +E
Sbjct: 407 EVRRGKALNLVLEAAKVKDASGNEVDVKKINAPDVEDTDGENPDSHGRAPEDE 459
>gi|258652072|ref|YP_003201228.1| trigger factor [Nakamurella multipartita DSM 44233]
gi|258555297|gb|ACV78239.1| trigger factor [Nakamurella multipartita DSM 44233]
Length = 513
Score = 215 bits (546), Expect = 1e-53, Method: Composition-based stats.
Identities = 92/481 (19%), Positives = 188/481 (39%), Gaps = 23/481 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P + L F+ + + NI GFR GKVP + + G+
Sbjct: 1 MKSTVENLNPTRVKLTVEVPFDELKPHFDRAYRALAGQVNIPGFRRGKVPAKILDARLGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL+E ++E + E + + + +P I + I+ L D
Sbjct: 61 GTILTEVVNEAVPAKYTEAIGEANLLVLGQPDIEVT---------RIDDGDALAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+I + + + VT D EV E +ID Q+ + E + GD V++D T
Sbjct: 112 IRPEITLPDVEAIAVTVDDVEVTEADIDEQVEALRDRFATTTPAERAAADGDLVSIDLTA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
V L++ + + + + VG+ DL E ++GL G+ K AG++
Sbjct: 172 EVGGETLDEAATEGLSYRVGAGDLVDGIDEAIIGLSAGESKTFSTTLVAG----PYAGQE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V V++D A F++ +R ++KI++ + ++L
Sbjct: 228 AAVTVTVQSVQDRTLPEVDDDFAQLASEFDTVEELRADLAEKIRRVKNREQGVAARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGI----LQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+ + PE +V E+ + + N + EE A
Sbjct: 288 EALLEATEVPAPEGIVNAEFESRAHDAVHAFDHNEDALNAHLEREGQTREEFDAELRESA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V T ++L + E N + V + E + R + Q+ N LA + A
Sbjct: 348 VQAVRTQLLLDALAEANQVGVDQNEFTERVLFNAQRLGISPDEYFQRLQE-GNQLAAIFA 406
Query: 415 PIFEDKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ K + +++ + + + +LF + ++ ++ + + +E S+
Sbjct: 407 EVRRGKALAGVVEKATVTNASGEVLDVAELFGLEKVAEEDEAIELADEAADLAQDEVESQ 466
Query: 472 I 472
+
Sbjct: 467 L 467
>gi|72162594|ref|YP_290251.1| trigger factor [Thermobifida fusca YX]
gi|119371024|sp|Q47MU1|TIG_THEFY RecName: Full=Trigger factor; Short=TF
gi|71916326|gb|AAZ56228.1| trigger factor [Thermobifida fusca YX]
Length = 463
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 88/477 (18%), Positives = 199/477 (41%), Gaps = 23/477 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L + +P L +F+ + + + IKGFRPGK P I G+
Sbjct: 1 MKTAVEELSPTRVKLTIEVPFEELDHAFDVTYKSLAKQVRIKGFRPGKAPAKLIDRYVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L++ ++ + E+ E +SK + P + I +E +L D
Sbjct: 61 GAVLTQAVNHAVPELYSEAVSKEEVPVLGPPEVEIT---------RLEDGKELAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E++ ++ ++VT D EV E++++ ++ + + + +E GD V++D +
Sbjct: 112 VRPKFEVTDYEGIEVTVDDAEVTEEQVNERLEALRQRFATLIGVDRPAEQGDHVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
SVD LED V + +G+ L E ++GL G+ + G++
Sbjct: 172 SVDGKKLEDAQASGVSYEIGAGTLLQGLDEAIIGLSAGESATFTTTLV----GGEHKGRE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ V ++++ A F++ +R ++++ + ++ + ++L
Sbjct: 228 ADVTVTVHSVKLKELPELDDEFARLASEFDTIEELRASEAERLGELLRAQQLRQARDRVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLA 354
+ + + +PES+++ E + + + ++S + + + +EE A
Sbjct: 288 EKLVDSIDIPLPESVIKQEADRRRELLDRQLSQSGLSKEAYLEAQEKTEEEFEAELTENA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
R V TG VL + + N+ + EE+ + +Q ++ + N L +
Sbjct: 348 TRAVKTGFVLDQLASQENLTASNEELTQYVVEQAQSMGISPDQLFQSLMQ-ANQLQLVYV 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ K +D ++ +I D + + E + S ET +S E
Sbjct: 407 EVLRAKALDLVVSKAKITDESGNT---IEPPTPVHTETITVASGDEETEESAAEQGE 460
>gi|297569274|ref|YP_003690618.1| trigger factor [Desulfurivibrio alkaliphilus AHT2]
gi|296925189|gb|ADH85999.1| trigger factor [Desulfurivibrio alkaliphilus AHT2]
Length = 446
Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats.
Identities = 85/456 (18%), Positives = 193/456 (42%), Gaps = 13/456 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + L R +DV +P + N E ++ + N+KGFR GKVP ++ YG
Sbjct: 1 MQVRVEEVSSLTRRIDVTLPREMVAGELNAAYEKLKGEVNLKGFRKGKVPRKVLEKNYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + D +++E + L K A + P + E + D+
Sbjct: 61 KVEYDVADRLVQESYFDALEKAGLDAVVHPEV---------REHRFEDDGTFFYQAEIDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYTV 179
P + + ++V Q EV ++E+ ++ ++ + + E D +D+T
Sbjct: 112 RPDFTLGEYKKVEVEQPELEVGDEEVAAELEKLRRESAPLRAVEDRVIADGDLAVIDFTA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++ ++ VGS + E + L GLK G++ FP + LAGK
Sbjct: 172 YDQGEEMKHVGGRDFTVDVGSGQIGPEFEDSLKGLKAGEESTFTVDFPANFPNMLLAGKS 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +KEV + ++++ A + + + +RG +K++Q E R + ++
Sbjct: 232 IEFAVKVKEVKERVLPELDDEFAKDIDADLATLDDLRGQIREKLRQQKENAGRGDLVDRV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I + + F+VP LV +E + +++++ + + + + ++ Y A++R
Sbjct: 292 MKAILDNHDFEVPPRLVAHEVDAMIKELENNLQNRGLSLEEAGINRDSLIEKYREGAEKR 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V +L I E I+V +E++ + ++ +++ +F + + +
Sbjct: 352 VRGDFILKKIAEVEEIKVADEDISKGFQRIADQYNMPVEEVKKYFHSRNELMPFI-HELL 410
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKL 453
+K++D ++ +I + ++++ ++
Sbjct: 411 TEKILDFLVAEAKIKTVPADQVEAAPETADNPEKEA 446
>gi|41408380|ref|NP_961216.1| trigger factor [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118463791|ref|YP_880939.1| trigger factor [Mycobacterium avium 104]
gi|67461822|sp|Q73XM7|TIG_MYCPA RecName: Full=Trigger factor; Short=TF
gi|166229901|sp|A0QDF1|TIG_MYCA1 RecName: Full=Trigger factor; Short=TF
gi|41396736|gb|AAS04599.1| Tig [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118165078|gb|ABK65975.1| trigger factor [Mycobacterium avium 104]
Length = 464
Score = 214 bits (543), Expect = 4e-53, Method: Composition-based stats.
Identities = 70/478 (14%), Positives = 191/478 (39%), Gaps = 23/478 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F +++ + + GFRPGK P +++ +G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFAELEPDFQRAYKELAKQVRLPGFRPGKAPAKLLEARFGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + E + + +++ + +P I + + E +L D
Sbjct: 61 EAMLDQVVTEALPARYGQAVAESEVHPLGQPEIEVTKK---------EYGQELAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++ + L+++ D EV ++++D ++ + E GD V++D +
Sbjct: 112 VRPELNLPDPGALKISVDPIEVTDEDVDAELQSLRARFGTLTGVERPVAEGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + + + + VGS L E L+G+ + +E + AG+
Sbjct: 172 TIDGQEVPGATAQGLSHEVGSGRLIEGLDEALIGMSVDESREFTTKLVSG----EHAGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++K V +++ A F++ +R +++ + ++++ +
Sbjct: 228 AQVTVTVKSVKERELPEPDDEFAQLASEFDTIDELRANLREQVGRVKRAQQAERIRDAAI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----A 354
D + + +PE++V+ + + L ++ K + V + + + + A
Sbjct: 288 DTLLEQVDIPLPEAIVKAQVDSALHGALHSLNHDESKLEEVLAQQGKSREEFENETRTAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V ++L + +K ++V +E++ L ++ +++L + Q+ N L + A
Sbjct: 348 ETDVKKQLLLDALADKLQVQVGQEDLTERLVATSRQYGIEPQQLLAYLQEN-NQLPAMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+ I ++++ + D + + F D E+ ++
Sbjct: 407 DVRRALAIAEVIRAATVTDTAGNTIDTSEFFGKRPSGDGAADEDADQADESTTADAGE 464
>gi|238926241|ref|ZP_04658001.1| trigger factor [Selenomonas flueggei ATCC 43531]
gi|238885921|gb|EEQ49559.1| trigger factor [Selenomonas flueggei ATCC 43531]
Length = 450
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 82/438 (18%), Positives = 188/438 (42%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E + L + + +L ++ + + I + NI GFR GK P +++ GK
Sbjct: 22 MKVTAEHGENREVTLTIEVEQEKLENATDGAAKRIAGRVNIPGFRKGKAPRKIVENFVGK 81
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E + + ++ E L ++D RP I I +E ++ +
Sbjct: 82 EAILQEAFEAVAQKAFDEALKEQDMEPVTRPEIDIVT---------LEEGKNVVFTAKFT 132
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P++ + + L+V + V E++IDRQ+ + ++ + + D +T+D+
Sbjct: 133 QRPEVTLGEYKGLKVEKPEASVSEEDIDRQIEGMRQHQGTLIDAPADAAVKKDDFITLDF 192
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD V E ++ +GS + L+G K G+++E+ FPED+ ++L G
Sbjct: 193 DGFVDGVPFEGGKGEDYPLQIGSGSFIPGFEDQLIGAKVGEEREVNVTFPEDYHAENLKG 252
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K +++ + S +++ A + F++ + +R + +++ + + + +
Sbjct: 253 KAAAFKCTVRSIKSRELPELDDAFAKKASKFDTLAELREDIRKNLQESAARRAENERRTK 312
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+D ++ T ++P +VEN ++Q++ + + Y
Sbjct: 313 AIDMATDNCTMEIPPVMVENRITAMIQEMAMRLEQQGMSLEQYLQYAGLDMARIRDEYRE 372
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V T ++L + + +I+V ++ +Y + K++ K +++L
Sbjct: 373 TAEKNVRTDLMLEEVAKAEDIKVDGRDLDQEVYAMALSYGATPKQV-QKIIKEQGRVSDL 431
Query: 413 RAPIFEDKVIDHILKSVQ 430
A + K I+ ++
Sbjct: 432 AATVLRKKTAQFIVDNIT 449
>gi|86147626|ref|ZP_01065935.1| trigger factor [Vibrio sp. MED222]
gi|85834537|gb|EAQ52686.1| trigger factor [Vibrio sp. MED222]
Length = 395
Score = 213 bits (542), Expect = 4e-53, Method: Composition-based stats.
Identities = 83/411 (20%), Positives = 192/411 (46%), Gaps = 17/411 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E DL ++++
Sbjct: 61 AVRQDVMGEVMQRHFIEAIVKEKINPAGAPTFAPVEN---------NEGADLVFNATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV E +++ + + K + E ++ G + T+D+ S
Sbjct: 112 YPEVELKGLENITVEKPAVEVKEADVEEMIETLRKQQATWTEVEAAADAGSRATIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E +N +G+ + + +VG G + EIE FPED+ ++L GK
Sbjct: 172 IDGEEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTAGMEFEIEVNFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + + +V + +N + + E ++ + +++ + V+ ++K Q +D
Sbjct: 232 KFSIKLNKVEARELPELNEEFVSKFGAAEGVEGLKAEVRKNMERELKQAVKNRIKEQAID 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ N+ DVP +L++ E + Q+ N ++ D+ + + AKRRV+
Sbjct: 292 GLVNENNIDVPSALIDQEIGVLRQQAAQRFGG------NTEAADQLPRELFEEQAKRRVV 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
G++LG + + ++ +E++++ + + + +++ ++++ +
Sbjct: 346 VGLLLGEVIKTEELKADDEKVKAIIEEMATAY-EDPTEVIAYYEQNEQMMN 395
>gi|304437035|ref|ZP_07396998.1| trigger factor [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304369986|gb|EFM23648.1| trigger factor [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 429
Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats.
Identities = 83/438 (18%), Positives = 189/438 (43%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E + L + + ++L + + + + + NI GFR GK P +++ GK
Sbjct: 1 MKVTAEHGENREVTLTIEVDQDKLEQATDGAAKRLAGRVNIPGFRKGKAPRKIVENFVGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E + + ++ E L++++ RP I I +E D+ +
Sbjct: 61 EAILQEAFESVAQKAFDEALTEQNMEPVTRPEIDIVT---------LEEGKDVVFTAKFT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P++ + + L+V + V E++IDRQ+ + ++ + + D +T+D+
Sbjct: 112 QRPEVTLGEYKGLKVEKPAVSVSEEDIDRQIEGMRQHQGTLIDAPDDAAVKKDDFITLDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD E ++ +GS + L+G K G+++E+ FPED+ ++L G
Sbjct: 172 EGFVDGTPFEGGKGEDYPLQIGSGSFIPGFEDQLIGAKVGEEREVNVTFPEDYHAENLKG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K S++ + S +++ A + FE+ + +R + +++ +E + + +
Sbjct: 232 KAAVFKCSVRSIKSRELPELDDAFAKKASKFETLAELREDIRKNLQEGAERQAENERRTK 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+D ++ T ++P +VEN ++Q++ + + Y
Sbjct: 292 AIDMATDNCTMEIPPVMVENRITAMIQEMAMRLEQQGMSLEQYLQYAGLDMARIRDEYRE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V T ++L + + +I+V ++ +Y + K++ K +++L
Sbjct: 352 TAEKNVRTDLMLEEVAKAEDIKVEGRDLDQEVYAMALSYGATPKQV-QKIIKEQGRVSDL 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
A + K I+ ++
Sbjct: 411 AATVLRKKTAQFIVDNIT 428
>gi|55669803|pdb|1T11|A Chain A, Trigger Factor
gi|55669804|pdb|1T11|B Chain B, Trigger Factor
Length = 392
Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 82/405 (20%), Positives = 192/405 (47%), Gaps = 18/405 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 4 MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 63
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 64 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 115 YPEVELKGLENIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 174
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E +N +G+ + + +VG G + I+ FPED+ ++L GK
Sbjct: 175 IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAA 234
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N++ R G A++ + +++ + ++ ++K Q +
Sbjct: 235 KFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAI 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + VP +L++ E N + Q+ NV++ + + + AKRRV
Sbjct: 295 EGLVKENEIQVPSALIDQEINVLRQQAAQRFGG------NVEAAAQLPRELFEEQAKRRV 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ 403
+ G++LG + + ++ EE++++ + + + +++ +++
Sbjct: 349 VVGLLLGEVIRTHELKADEEKVKALITEMATAY-EDPSEVVSYYE 392
>gi|118579614|ref|YP_900864.1| trigger factor [Pelobacter propionicus DSM 2379]
gi|166229912|sp|A1AN86|TIG_PELPD RecName: Full=Trigger factor; Short=TF
gi|118502324|gb|ABK98806.1| trigger factor [Pelobacter propionicus DSM 2379]
Length = 437
Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 98/437 (22%), Positives = 205/437 (46%), Gaps = 12/437 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + +++ + IP++++ + I+ +A I+GFRPGK PL IK Y
Sbjct: 1 MQVNVETISPVSKKVSIEIPADQVNSEIEKTYATIQKRAKIQGFRPGKAPLQLIKRTYAD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E + + + + L++ P++ ++E K ++
Sbjct: 61 SMRDEVMRRFYETTLFKTLAEHKIEPIDAPTVE---------CDILEEGTPFKYSALVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTVDYT 178
+P++ ++ + L++T++ D ++I+ ++A + + E+G VT+DY
Sbjct: 112 MPEVLLTQYTGLEITKERYVFDPQKIEDEIARMRDGMAQLVPVEGDVAVEMGHMVTIDYA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E S +N VG+ L E + LVG+K G+ K + PE + ++AGK
Sbjct: 172 FSVDGFPEESTSAENAVVEVGAHRLLPEFEDQLVGMKCGESKHVTVTLPEAYRNPEVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ E+ +N++ A + FE+ +R ++ +QH + + Q+ + +
Sbjct: 232 EGAFMVTLNEIKRKELPELNDEFAQQFGEFETVEQLREKMTEYHQQHEQDRIEQEQRETV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + K DVP+S+V+ + +LQ ++ + S N + + D+ + A +
Sbjct: 292 IQALIEKNPLDVPQSMVKRQVEQMLQNLKNRLKSRNMSMEMMGMDDDSFRERVRDSATDK 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G++L + EK + V++EE++ + G +++ +H+ P+ L A I
Sbjct: 352 VRGGLLLMALIEKEDFSVSDEEIEKRYEKLAGGNEEMLERIKEHYTSSPSVRHSLIAEIK 411
Query: 418 EDKVIDHILKSVQIVDR 434
EDK + +L + I +
Sbjct: 412 EDKAVRFLLDNAVITET 428
>gi|51891495|ref|YP_074186.1| trigger factor [Symbiobacterium thermophilum IAM 14863]
gi|67461730|sp|Q67SK1|TIG_SYMTH RecName: Full=Trigger factor; Short=TF
gi|51855184|dbj|BAD39342.1| trigger factor [Symbiobacterium thermophilum IAM 14863]
Length = 429
Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats.
Identities = 78/434 (17%), Positives = 183/434 (42%), Gaps = 17/434 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ E + +V + ++ + S + + I GFR GK P + + +YGK
Sbjct: 1 MKATWDKLENNWMQFEVEVDASEFSKSVEAAFRKMNRQVTIPGFRRGKAPRAVFERVYGK 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
L E +D+I+ E L + +P I + + E L +
Sbjct: 61 EALVQEAVDQILPRAYSEALEQGQIEPISQPEIEVVQA---------EDGKPLIFKGKVQ 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+ P++ + + + + EV ++E++ Q++ + + E+ E G +D+
Sbjct: 112 VTPEVTLGRLSGFGIEKQVPEVTDQEVEEQLSALRERLATLVTDESGEVGQGSFAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E + +GS E LVG K G+ +E+ FPED+ + LAGK
Sbjct: 172 GFIDGEPFEGGKGEGYTVEIGSGTFIPGFEEGLVGAKAGETREVTVTFPEDYHAQHLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ EV +N++ A + F++ +R ++ + + + + ++
Sbjct: 232 QAVFKVTVHEVKKKELPELNDEFAQQVSPFKTVEELRADIKNRLSEAAAQKAEEDFRNKV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ +++ + +VPE LV ++ + ++ +++ Q E+ +
Sbjct: 292 VEAVADDASVEVPEVLVHDKVHDMIHDFEHQLAQQGITLDMWHQITGKTHEDLHKELEPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + V +VL + ++ + V++ E+++ + L +P + + + A+LR
Sbjct: 352 ATKLVKVDLVLAAVAKQVGLTVSDAELEAEFDRLLAMYPKQ-QSYIRQLRASAAYRAQLR 410
Query: 414 APIFEDKVIDHILK 427
+ + K ++H+++
Sbjct: 411 RDLLKQKTVEHLVE 424
>gi|118618993|ref|YP_907325.1| trigger factor [Mycobacterium ulcerans Agy99]
gi|166229907|sp|A0PU35|TIG_MYCUA RecName: Full=Trigger factor; Short=TF
gi|118571103|gb|ABL05854.1| trigger factor (TF) protein Tig [Mycobacterium ulcerans Agy99]
Length = 484
Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats.
Identities = 75/482 (15%), Positives = 192/482 (39%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + V +P L F +++ + + GFRPG+ P+ +++ +G+
Sbjct: 1 MKSSVEQLSPTRVRIKVEVPFAELEPDFQRAYKELAKQVRLPGFRPGRAPVKLLEARFGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +++ + + L++ + + RP I + + E DL D
Sbjct: 61 EAMLDQIVNDAVPSRYGQALAESEIQPLGRPDIEVTQK---------EYGQDLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + L V+ D E + E++ ++ + E GD +++D +
Sbjct: 112 VRPEIALPDLTGLSVSVDAIEATDDEVNAELESLRARFGTLTGVERPVATGDFISIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + + V S L + + +VGL + + D AG+
Sbjct: 172 AVDGEDVPNAAAEGLSHEVRSGRLIAGLDDAVVGLSVDESRVFTAKLAAG----DHAGRD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V +++ A F++ +R +++ Q ++++ +
Sbjct: 228 AEVTVTVKSVKERELPEPDDEFAQLASEFDTIDELRASLREQVLQAKRVGQAEQIRNATI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQK----VRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
D + + PES V+ +Y G+L + + + N+ S + +
Sbjct: 288 DALLERVDVPTPESYVQAQYEGVLHSALSGINNDEARFNELLVEQGSSRDAFDAEARTAS 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V ++L + + ++V +E++ L ++ +++ + Q+ N L + A
Sbjct: 348 EKDVKRQLLLDALADDLKVQVGQEDLTERLVLTSRQYGIEPQQLFVYLQEN-NQLPSMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ + + + ++ + D + + F E+ LLD + + + +E
Sbjct: 407 DVRRELAVKAVAQAATVTDTDGNTIDTSEFFGKPPENDVTDLLDDDADGDAGVDADGDTE 466
Query: 472 IS 473
S
Sbjct: 467 NS 468
>gi|78485520|ref|YP_391445.1| trigger factor [Thiomicrospira crunogena XCL-2]
gi|119371025|sp|Q31GF2|TIG_THICR RecName: Full=Trigger factor; Short=TF
gi|78363806|gb|ABB41771.1| trigger factor [Thiomicrospira crunogena XCL-2]
Length = 436
Score = 213 bits (541), Expect = 6e-53, Method: Composition-based stats.
Identities = 96/451 (21%), Positives = 219/451 (48%), Gaps = 20/451 (4%)
Query: 1 MQVIEKFSE-GLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
MQV + E GL+ +++V +P+ L +R+ +R + GFRPGKVP+S +K YG
Sbjct: 1 MQVTVEKPETGLEHKINVTLPAGDLDSKVEQRLAQMRRTVKMDGFRPGKVPMSVVKKRYG 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E + E +++ + ++K A P + E + +++
Sbjct: 61 GQVRQEMMGETVQQSFYDAVAKESLNIAGYPQFQELD----------EKDGHIVYSATFE 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTVDY 177
+ P++E+ F L+V EV +K++++ + + + +A++ +++ GD+V +D+
Sbjct: 111 VFPEVELPKFSSLKVETVTSEVTDKDVEKMVTRLREQKMAWKPANGNKKAKEGDQVIIDF 170
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
D E + V +GS + + ++G+K ++K IE FPED+ +L G
Sbjct: 171 VGKKDGEEFEGGKAEEVPLELGSGRMIPGFEDGIIGMKKNEEKTIEVTFPEDYQSDELKG 230
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ V + ++ V + + ++ + G E +E A+ +++ + V K +
Sbjct: 231 QTVTFDITVHSVQTKVLPEIDEEFVKSFGIEEGTEEALVNEIRSNMEKELKRSVENKNRT 290
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
+LD ++ K ++P+++V+ E + ++++ + K++++ E A+
Sbjct: 291 AVLDALAEKVEVELPQAMVDQEASALMERQLEQFQQQGLKAEDIGLTAEAFK----PEAE 346
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+RV G+VLG + ++ IE T+E Q+ + Q + +++++ + K P A E+ A
Sbjct: 347 KRVKIGLVLGEVIKEYKIEATDEARQAFIQDQASSY-EDPQEVIEWYAKNPQAQKEIDAI 405
Query: 416 IFEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ E ++ + IL + + +F+++ ++
Sbjct: 406 LVEKEITNKILSEAKTKEVSKSFEEIVSPAA 436
>gi|258592919|emb|CBE69228.1| putative Trigger factor (TF) [NC10 bacterium 'Dutch sediment']
Length = 431
Score = 212 bits (540), Expect = 7e-53, Method: Composition-based stats.
Identities = 110/435 (25%), Positives = 190/435 (43%), Gaps = 14/435 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + KR L V +P L++ + KA + GFRPGK+P ++S +
Sbjct: 1 MKVDIEEISSTKRALRVELPPESLSEKLETAYLRLAKKARLPGFRPGKIPRDLLRSRFRD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + E+I E + L + + P++ + E L R +D+
Sbjct: 61 EAKQEALRELIPESYGQALKESNLDPISEPTLE---------EMVCEEGKPLSYRACFDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE-IGDKVTVDYTV 179
P +++S + ++V ++ EV + E+D+ + + + F + D + VDY
Sbjct: 112 RPALQLSGYTGVEVYKEKLEVADTEVDQAVEYLRERTAEFVPMDGWPALQEDLLVVDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
L+ S +N ++G+ E L GLK GD KE FP D+ ++LAGK+
Sbjct: 172 FTGGKPLKGVSGQNTSILLGAHRFIPEFETQLHGLKKGDLKEFSMEFPNDYGRRELAGKR 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V ++KEV +++ A + E A+R Q + H E ++K QIL
Sbjct: 232 VLFKVTVKEVKKKQVPSPDDNFAKSVAGCEDIQALREKIKQDLLAHKEREQVVRLKDQIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + FD PESLV+ E IL +R S + S DE L LA +RV
Sbjct: 292 DKLRTAHPFDPPESLVDAEVEAILADLRRSAGSRKPTAA--PSEDEATLAKARELASKRV 349
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++L T+ ++ +EV+E+E+ + + + D + + R + E
Sbjct: 350 QDSLLLETVAKQEGLEVSEDELNKEVESAAATLNRKPEALRDML-EREGRIEAFRTRLLE 408
Query: 419 DKVIDHILKSVQIVD 433
K +D + K IV+
Sbjct: 409 GKALDLLYKQANIVE 423
>gi|158522702|ref|YP_001530572.1| trigger factor [Desulfococcus oleovorans Hxd3]
gi|238686896|sp|A8ZXB6|TIG_DESOH RecName: Full=Trigger factor; Short=TF
gi|158511528|gb|ABW68495.1| trigger factor [Desulfococcus oleovorans Hxd3]
Length = 443
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 90/439 (20%), Positives = 190/439 (43%), Gaps = 13/439 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + +K+ L V IP ++ N + IR A IKGFRPGK P+S +K LY
Sbjct: 1 MHVTVEDQSTIKKVLHVEIPVEVVSRELNAGFDQIRKTAKIKGFRPGKAPMSMLKRLYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ ++ ++I+ +P + ++ P I ++ + +I
Sbjct: 61 QVHADVSIQLIQSSLPNAIREKALNIIGDPQI---------NPSVLSEEGPFTYSATIEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV--TVDYT 178
P+I+ F L + + + ++E+D Q+ + KN + +K +DY
Sbjct: 112 KPEIDDIDFKGLTLKKPLYACTDEEVDHQLTLLRKNLAKLQDIAEPRPAQEKDAAIIDYQ 171
Query: 179 VSVDNVILEDQSKKN-VQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D + D + +GS + + +VG+ G+ + E FPE H K LAG
Sbjct: 172 ARLDGQPVADLPDEQEFHLRIGSGAIDKTFDQQVVGMTVGETRTFEVTFPETHGSKTLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++K + + +N++LA + F+S ++ + ++ + Q++ Q
Sbjct: 232 NTISFTVTLKSLKEEILPELNDELAAQFGPFDSLDQLKTEIRKNLQSGYDRRGEQELHEQ 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ + K +F+VPE++V++E +GIL ++ S+ N + + E + Y A +
Sbjct: 292 VFTALLEKTSFEVPETMVQHELDGILDEIDRTYSAYNLSLEALGQTKEALSEKYRDTAVK 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ ++L I ++ + ++++E+ + ++Q P + LR +
Sbjct: 352 QAKRHLILNKIIDQEKMAISDDELAEGFESIAKSMGQPADMVKQYYQGNPEQIDVLRYTL 411
Query: 417 FEDKVIDHILKSVQIVDRK 435
E K + I++ + +
Sbjct: 412 LEKKAMRIIIEGSTVEEVT 430
>gi|118602248|ref|YP_903463.1| trigger factor [Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
gi|166229931|sp|A1AVN5|TIG_RUTMC RecName: Full=Trigger factor; Short=TF
gi|118567187|gb|ABL01992.1| trigger factor [Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
Length = 429
Score = 212 bits (539), Expect = 9e-53, Method: Composition-based stats.
Identities = 91/441 (20%), Positives = 205/441 (46%), Gaps = 13/441 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +GL R L V +P + ++ ++ I S+ N GFR GKVP++ ++ +G
Sbjct: 1 MKASLEILKGLDRSLTVDLPIDIFNQKTDKILQKIASQVNFDGFRKGKVPVAVVRKRFGN 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ S+ I+EI+ E + + L++ +P I+ E + + +++
Sbjct: 61 NVNSDAINEIVNETLTDALTQVKATPVSQPVIS---------KIDSEDEKNFSYTVDFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I+++ F L + Q E+ + + R + + + ++ + +SEIGD++++D+
Sbjct: 112 FPEIKVADFSKLTIEQIKVEITKADEQRTLNGLKEQLTEYKAVKRKSEIGDRLSIDFKGL 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + K+ + ++G + E L+ + ++ FP+++ + L+GK V
Sbjct: 172 IDGKTFDGAEAKDFKIVLGKGSMIKGFEEGLIDVTPNSMLMLDLVFPKNYHMNKLSGKAV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+I EV P +N A + G + A++ ++K + + K I D
Sbjct: 232 TFEININEVALPKEPKLNEVFAKKFGEKDMDALKVSIKMQMKVEIDGRIGYLNKNAIFDA 291
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+S FDVP+S ++NE +L++++ + + + E ++ A+RRV
Sbjct: 292 LSEANQFDVPQSSIDNEAQNLLKEMKERIQQQG----GLPAQGEIPASAFNDEAQRRVKL 347
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+++ I N + + E++ + L + +K++D + + P + + E
Sbjct: 348 GLLVNQISNDNKLSASLEQIDAKLQEISQAHGKDTQKIIDSYNQDPTKKLSIELLVIEKM 407
Query: 421 VIDHILKSVQIVDRKVTFDQL 441
V D IL ++ ++ F ++
Sbjct: 408 VQDLILDKAKVTFKQKKFQEI 428
>gi|304413218|ref|ZP_07394691.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Candidatus
Regiella insecticola LSR1]
gi|304284061|gb|EFL92454.1| peptidyl-prolyl cis/trans isomerase (trigger factor) [Candidatus
Regiella insecticola LSR1]
Length = 435
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 95/448 (21%), Positives = 214/448 (47%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + ++ + + R+ I GFR GK P+ +K Y
Sbjct: 1 MQVSIETTQGLGRRATITLIADPIEAAVKNRLIKKAQNVRIDGFRKGKAPMDIVKRHYSV 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L + ++++ +++ K + A PS G + + + +++
Sbjct: 61 EVLQYVLGDMMERNFFDVIEKENINLASPPS---------YFPGEYKTGENFSYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
P IE+ + +D+++ + E+++ ++D + + K ++ E + +VT+D+T
Sbjct: 112 YPDIELKNLEDIEIETPVVEINDADVDTMLETLRKQQASWQENNDVVKAEDHRVTIDFTG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
S+D V E S+ + ++G + E ++ KTGD+ IE FPED+ ++ L GK
Sbjct: 172 SIDGVEFEGGSETDSILVMGENKMIPGFEEGILDHKTGDKFVIEANFPEDYQVEKLRGKL 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQI 297
+K++ + +L +LG S +RG + +++ + VR +K ++
Sbjct: 232 ASFAIVLKKIEVRQLPELTEELIKKLGIVDGSLVNLRGEVRKNMERELKNTVRNSIKTKL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
++ + DVP++LVE E + + +V S N + + + A++R
Sbjct: 292 IEELLKSNEIDVPKALVEKEIDALHGQVIRRFS------DNKTLMSGLPRKLFEEKARQR 345
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V+ G++ I KN+++V + + L + + + ++++D++ L +R+ I
Sbjct: 346 VVVGLLFAEIISKNDLKVDKVLLGKRLSEIASAY-ENPQQVIDYYNNNEELLNNIRSAIL 404
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E++ +++IL V+++D+K+ F +L +
Sbjct: 405 EEQAVEYILDKVKVIDKKMNFTELMSQA 432
>gi|94264490|ref|ZP_01288277.1| Trigger factor [delta proteobacterium MLMS-1]
gi|93455049|gb|EAT05276.1| Trigger factor [delta proteobacterium MLMS-1]
Length = 450
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 82/460 (17%), Positives = 184/460 (40%), Gaps = 14/460 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + L + L+V +P + ++ + ++KGFR GKVP ++ YG+
Sbjct: 1 MQVSVEDVSNLTKRLEVTLPPELVGKELESAYNKLKGEVDLKGFRKGKVPRKVLEKNYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + D +I+E + L + A + P I E + D+
Sbjct: 61 KVQYDVADRLIQETYFDALEQVSIDAVVHPEI---------RDHRFEDDGGFIYQAEVDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
P E+ + ++V V E E+D ++A++ + E GD +D+T
Sbjct: 112 RPAFELGEYKGVEVEIAELTVGEDEVDAELAKLRQQLAPLRTVEDRREVADGDIAVIDFT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+++ + VGS + E LVGL G+Q + FP LAGK
Sbjct: 172 AYDQGELMKQVGGNDFSVDVGSGQIGPEFEGKLVGLVVGEQSTVTIDFPAGFGNPILAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++KE+ + ++++ A F + + +R + Q + R + +
Sbjct: 232 SIEFKITVKEIKERVLPELDDEFARDAGEQFTTLAELREHIRSQRLQEMQDKRRGDLVDR 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++ I + F+VP LV +E + +++++ + + + + ++ Y A++
Sbjct: 292 VMKRILEGHQFEVPPRLVAHEIDSMIKELETNLENQGLSLEAAGINRDSLVEKYRDAAEK 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R+ +L I + I+V +E++ + ++ ++ +F + +
Sbjct: 352 RIRGDFILKKIADLEEIKVADEDINKGFQRIADQYNMPVAEVKKYFHSRNELMP-FMHEL 410
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDK 456
+K++D ++ + I + + + E+ +
Sbjct: 411 LTEKILDFLVDAANIKEVPAAVGEEAAGTEENDTASGDKE 450
>gi|25028869|ref|NP_738923.1| trigger factor [Corynebacterium efficiens YS-314]
gi|259507931|ref|ZP_05750831.1| trigger factor [Corynebacterium efficiens YS-314]
gi|41018231|sp|Q8FN35|TIG_COREF RecName: Full=Trigger factor; Short=TF
gi|23494156|dbj|BAC19123.1| putative trigger factor [Corynebacterium efficiens YS-314]
gi|259164426|gb|EEW48980.1| trigger factor [Corynebacterium efficiens YS-314]
Length = 454
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 83/470 (17%), Positives = 190/470 (40%), Gaps = 25/470 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++ V +P L ++ + + I GFR GK P I + +G+
Sbjct: 1 MKSSVEQLSDTRVKITVEVPFEELKPELDQAYAALAQQVQIPGFRKGKAPRQLIDARFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + +++++ + + + D +A +P + I + IE ++ D
Sbjct: 61 GPVLEQVVNDMLPTRYGQAIEENDIKAIGQPDVEITK---------IEDNEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + F + V VD+ +D ++ + + + + G+ VT++ +
Sbjct: 112 VRPEITLPDFSAINVEVPAVTVDDAAVDEELESLRARFSTLKDHNHKLKKGEFVTLNLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
SVD +E+ + + + + +GS DL E L+G K D F + + D GK+
Sbjct: 172 SVDGEKVEEATTEGLSYEIGSGDLIDGLDEALLGQKKDDT----VEFTTELANGDYQGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ I ++++ A F++ +R +++ + ++ ++L
Sbjct: 228 AVVTAEITATKQRELPALDDEFAQLASEFDTMEELRESTKTQVETRLKNEQAANIRDEVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHMLA 354
F +P S+VE + + L ++ E++ N ++ + EE + A
Sbjct: 288 KAALESSDFALPNSIVEEQAHSQLHQLLGELAHDDAALNSVLESQGTTREEFEKQNREDA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V T + L + E EV+++E+ + + + + Q+ +A L A
Sbjct: 348 EKAVRTQLFLDVLAETEEPEVSQQELTDHILFTAQSYGMDPNQFIGQLQQS-GQIANLFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVE 461
+ K + + V + D ++ F E E D+++ E
Sbjct: 407 DVRRGKALAQAICRVNVKDSEGNEIDPKDYFGE--EEVAEDSNDEAADQE 454
>gi|297717794|gb|ADI50040.1| cell division trigger factor [Candidatus Odyssella thessalonicensis
L13]
Length = 460
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 126/468 (26%), Positives = 252/468 (53%), Gaps = 15/468 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ ++GLK+E +V++PS+ + +ER+ I K + GFRPG +P + +K YG
Sbjct: 1 MKISRTSAQGLKQEFNVVVPSSDMDTRIHERLTVIGKKVKMAGFRPGMIPTTILKQRYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ ++ +I+ V +I + + R A +P ++I + DL++++ +++
Sbjct: 61 DATQDAVEAVIRTAVSQISKENNLRQAAQPKVSIE---------AFDEGKDLEVKIEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP IE+ FD +++ + + ++ E+ +++ EI N+ F+ K ++ D + +D
Sbjct: 112 LPTIELKGFDKIKLEKLVVDIPAVEVTKKIDEIVTNHKKFQPLAKARAAKDDDLIHLDVQ 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTE-ILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+VD + K + L S E + G+K GD E+ F ED K +AG
Sbjct: 172 ATVDGKAFKGFDKHMHVIVGSEEKLLSGALEAAVKGVKAGDSLEVTEKFSEDFGNKAVAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K ++L ++ ++ P V +N++LA G ES + + +++ L R ++KR +
Sbjct: 232 KDLKLELTVTKIEEPAKVELNDELAKEFGCESVDDFKKRVQEALEREYTNLSRMRLKRHL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA---NQKSQNVDSIDEEDLQYYHMLA 354
LD +++ Y+FD+PE++VENE+N I ++R E+ A ++ + ++E + Y ++
Sbjct: 292 LDALNSDYSFDLPEAMVENEFNAIWSRLRQELEEARRNGTLEEDDNRSEDELKKEYREIS 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+RRV G+++ + + I+V + E++ A++Q+ R+P K++ FQK P A+ ++ A
Sbjct: 352 ERRVRLGLIISEVAREKKIKVEDVEIRQAIFQEAMRYPNQTKEVFAFFQKNPQAVEQIAA 411
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVET 462
PI EDKV+D IL V++ ++KV+ +QL + P + + +
Sbjct: 412 PILEDKVVDFILTEVKLAEKKVSPEQLIEAIRGVVPGFEAEDETTEKA 459
>gi|227548720|ref|ZP_03978769.1| trigger factor [Corynebacterium lipophiloflavum DSM 44291]
gi|227079187|gb|EEI17150.1| trigger factor [Corynebacterium lipophiloflavum DSM 44291]
Length = 461
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 78/474 (16%), Positives = 187/474 (39%), Gaps = 23/474 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +L V +P + L ++ + I + I GFR GK P I + +G+
Sbjct: 1 MKTTVDKLSDTRVKLTVNVPFDELGAEIDQAYKAIAQQVTIPGFRRGKAPRQLIDARFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + +++++ +++ + +P I I + I ++ D
Sbjct: 61 GPLLEQVVNDMLPTRYERAITENELNPLGQPQIDITK---------IVDNEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+I + F + V VD+ +D ++ + + + + GD +D T
Sbjct: 112 IRPEITVPDFSAISVNVAALSVDDDAVDAELDNLRARFGELKDTSRKLKKGDFAVIDITA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D +++ S + + + VGS DL + + GLKTG+ E + G++
Sbjct: 172 EIDGETIDEASTEGLSYEVGSDDLIEGLDKAVKGLKTGEDAEFTATI----EYGEHKGEE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ ++++ A + F++ +R ++++ + +++ ++L
Sbjct: 228 ATIKVVVQQTKERTLPDLDDEFAQMASEFDTVEELRESTKTQLEETKKAEQAAEIRDEVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY----HMLA 354
+ F +PES+VE + + L ++ +M+ + + + A
Sbjct: 288 RAALAQSEFSLPESIVEEQAHNQLHQLLGQMAHDENALAQLLEAQGTTREEFDAKTREQA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V T + L + E+ EV+++E+ + + + + Q+ +A L +
Sbjct: 348 EESVRTQLFLDAVAEQEQPEVSQQELTDHILFTAQSYGMDPNQFVAQLQQS-GQIANLFS 406
Query: 415 PIFEDKVIDHILKSVQIVDRK---VTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ K + + + D + V ++ F E S E +S
Sbjct: 407 DVRRGKALAAAIARTTVTDSEGNSVDPNEYFGEIEEDSAEDGNAVASDATESTE 460
>gi|320530212|ref|ZP_08031282.1| trigger factor [Selenomonas artemidis F0399]
gi|320137645|gb|EFW29557.1| trigger factor [Selenomonas artemidis F0399]
Length = 429
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 82/438 (18%), Positives = 188/438 (42%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E + L + + ++L + + I ++ NI GFR GK P +++ GK
Sbjct: 1 MKVTAEHGENREVTLTIEVEQDKLEKASEGAAKRISARVNIPGFRKGKAPRRIVENFVGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+IL E + + ++ + L++++ RP I I +E D+ +
Sbjct: 61 DAILQEAFEGLAQKAFEDALTEQNMEPVTRPEIDIVT---------LEDGKDVVFTAKFT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P + + ++ L V ++ V +++IDRQ+ + ++ + + D VT+D+
Sbjct: 112 QRPDVRLGAYKGLAVPKEEVTVADEDIDRQIEGMRQHQGTLVDAPADAAVKNDDFVTLDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD E ++ +GS + L+G K G+++++ FPE++ ++L G
Sbjct: 172 EGFVDGAAFEGGKGEDYPLQIGSGSFIPGFEDQLIGAKVGEERDVNVTFPEEYHAENLKG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K I+ + S +++ A + FE+ + +R + + +E + + +
Sbjct: 232 KDAVFKCKIRSIKSRELPELDDAFAKKASKFETLAELREDVRKNLLAAAERKAETERRSK 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHM 352
+D ++ T ++P +VEN ++Q++ + + D + Y
Sbjct: 292 AIDMATDHCTMEIPPVMVENRITAMIQEMAMRLEQQGMSLEQYLQYAGLDIGKIREDYRE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V T ++L + + I+V ++ +Y + K++ K +++L
Sbjct: 352 TAEKNVRTDLMLEEVAKAEGIKVEGGDLDREVYAMAVSYGATPKQV-QKIIKEQGRVSDL 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
A + K I+ ++
Sbjct: 411 AATVLRKKTAQFIVDNIT 428
>gi|77919288|ref|YP_357103.1| trigger factor [Pelobacter carbinolicus DSM 2380]
gi|119370916|sp|Q3A3X4|TIG_PELCD RecName: Full=Trigger factor; Short=TF
gi|77545371|gb|ABA88933.1| trigger factor [Pelobacter carbinolicus DSM 2380]
Length = 439
Score = 212 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 82/444 (18%), Positives = 196/444 (44%), Gaps = 12/444 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + +K++L I + F+ + + A I GFR GKVP S ++ Y
Sbjct: 1 MNVKVEDISSIKKKLSFEISVEAVDTEFSNEYKKLSKTAKIPGFRKGKVPRSVLERQYAG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + ++ E + L A P + + +G ++ ++
Sbjct: 61 HVEGQVFERLVNETFFKALVDEKINAVSAPEV--------VDNGPLKPGQAFTYEAEVEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYTV 179
P +E + L + ++ V++++++ ++ ++ K+ EV E E D +D+
Sbjct: 113 RPDVEAKDYIGLDLKKENFAVEDQDVEDRLQDMLKSRAKVEVSEREVAQAGDIAVIDFEG 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD + + +GS + +VG++ G K+IE FPED+ ++LAGK
Sbjct: 173 FVDGEAFAGGKAEGHELELGSNSFIPGFEDQVVGMECGQDKDIEVAFPEDYGNEELAGKP 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++ + ++ + A G ES ++ + I+ + + + ++ D
Sbjct: 233 AVFKVRLNQIKERVLPALDEEFAKEAGLESVEDLKIKIRESIEGQERDRIEKDFRERMTD 292
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+VPE +++++ + +L+ ++ M + + +++ E Q Y +A ++V
Sbjct: 293 ALIEANEFEVPEGMIDSQIDYMLKNLQNRMQAQGMRLEDMGINAESFRQIYREVAAKQVK 352
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
++L I + N++V E+E++ L + + ++ +++++ + L + + E+
Sbjct: 353 ASLILEAIALQENLKVEEDEIKDKLEEIVETSGAPKEAVMNYYSNDESRRG-LVSQMAEE 411
Query: 420 KVIDHILKSVQIVDRKVTFDQLFD 443
KV+ + +I V + L +
Sbjct: 412 KVVAFLTGKAKI--EMVDKEALEN 433
>gi|262277074|ref|ZP_06054867.1| trigger factor [alpha proteobacterium HIMB114]
gi|262224177|gb|EEY74636.1| trigger factor [alpha proteobacterium HIMB114]
Length = 470
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 110/446 (24%), Positives = 238/446 (53%), Gaps = 12/446 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V S+GL+ +L VI+ + + ++++++++ ++KGFRPGK P +K +GK
Sbjct: 1 MKVNVTSSKGLESKLSVIVTKKEIQEKIDKKLDEVKDTIDLKGFRPGKAPRELLKKQFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E I++ + + + L ++ + A +P I I D DL+ + +
Sbjct: 61 ALYGEVIEKTLNDSAFQALKDKNIKPAGQPKIDIKSSGED---------KDLEFTIEVEK 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
+P+I+ +++ + + D+K+++ ++ ++A+++ + + + D V +Y
Sbjct: 112 VPEIKKVDLSKIEIEKYEVKADKKDLETRLNQLAESSKKYNDKDASKAAANNDLVEFNYE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD E + +Q ++G + ++G+K D+K ++ P+++ K+LAGK
Sbjct: 172 ATVDGKSFEGNKGEKLQIVLGKDLFIKGFDKQIIGVKKNDEKAVKINLPDNYPKKELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I + SP +++ A +G + S ++ + ++I + E + Q K++IL
Sbjct: 232 ASEFKCKITNIKSPEEQKIDDAFAKNMGAKDLSDLKSMIEKQISKEFESITDQLCKKEIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFE-MSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D + ++ D+P+ ++E E + + E M +K + +DE D + +++RR
Sbjct: 292 DQLDKQFKIDLPKGMLEAELKTVEHTMVHEKMHEQGEKDHSKIKLDENDKKEVKKISERR 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V +VL IGE+++I+V+ +E+Q L +QL +PG EK + +++QK P+ L +LR PIF
Sbjct: 352 VKLALVLANIGEEHSIKVSSQELQGELEKQLRMYPGQEKTIREYYQKNPSELTKLRGPIF 411
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFD 443
EDKV++ I + + + +T ++L +
Sbjct: 412 EDKVMNLIKEKAKTKIKSITKEELQN 437
>gi|313894818|ref|ZP_07828378.1| trigger factor [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976499|gb|EFR41954.1| trigger factor [Selenomonas sp. oral taxon 137 str. F0430]
Length = 429
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 187/438 (42%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E + L + + ++L + + I ++ NI GFR GK P +++ GK
Sbjct: 1 MKVTAEHGENREVTLTIEVEQDKLEKASEGAAKRISARVNIPGFRKGKAPRRIVENFVGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+IL E + + ++ + L++++ RP I I +E D+ +
Sbjct: 61 DAILQEAFEGLAQKAFEDALTEQNMEPVTRPEIDIVT---------LEDGKDVVFTAKFT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P + + ++ L V ++ V +++IDRQ+ + ++ + + D VT+D+
Sbjct: 112 QRPDVRLGTYKGLAVPKEEVTVADEDIDRQIEGMRQHQGTLVDAPADAAVKNDDFVTLDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD E ++ +GS + L+G K G+++++ FPE++ ++L G
Sbjct: 172 EGFVDGAAFEGGKGEDYPLQIGSGSFIPGFEDQLIGAKVGEERDVNVTFPEEYHAENLKG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K I+ + S +++ A + FE+ + +R + + +E + + +
Sbjct: 232 KDAVFKCRIRNIKSRELPELDDAFAKKASKFETLAELREDVRKNLLAAAERKAETERRTK 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHM 352
+D ++ ++P +VEN ++Q++ + + D + Y
Sbjct: 292 AIDMATDNAAMEIPPVMVENRITAMIQEMAMRLEQQGMSLEQYLQYAGLDIGKIREDYRE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V T ++L + + I+V ++ +Y + K++ K +++L
Sbjct: 352 TAEKNVRTDLMLEEVAKAEGIKVEGSDLDREVYAMAVSYGATPKQV-QKIIKEQGRVSDL 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
A + K I+ ++
Sbjct: 411 AATVLRKKTAQFIVDNIT 428
>gi|15609599|ref|NP_216978.1| trigger factor [Mycobacterium tuberculosis H37Rv]
gi|15841986|ref|NP_337023.1| trigger factor [Mycobacterium tuberculosis CDC1551]
gi|148662297|ref|YP_001283820.1| trigger factor [Mycobacterium tuberculosis H37Ra]
gi|148823662|ref|YP_001288416.1| trigger factor [Mycobacterium tuberculosis F11]
gi|167969786|ref|ZP_02552063.1| trigger factor [Mycobacterium tuberculosis H37Ra]
gi|215404398|ref|ZP_03416579.1| trigger factor [Mycobacterium tuberculosis 02_1987]
gi|215412219|ref|ZP_03420981.1| trigger factor [Mycobacterium tuberculosis 94_M4241A]
gi|215446708|ref|ZP_03433460.1| trigger factor [Mycobacterium tuberculosis T85]
gi|253798459|ref|YP_003031460.1| trigger factor protein tig [Mycobacterium tuberculosis KZN 1435]
gi|254232596|ref|ZP_04925923.1| trigger factor (tf) protein tig [Mycobacterium tuberculosis C]
gi|254365238|ref|ZP_04981284.1| trigger factor (tf) protein tig [Mycobacterium tuberculosis str.
Haarlem]
gi|254551510|ref|ZP_05141957.1| trigger factor [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|289553747|ref|ZP_06442957.1| trigger factor protein tig [Mycobacterium tuberculosis KZN 605]
gi|289746244|ref|ZP_06505622.1| trigger factor protein tig [Mycobacterium tuberculosis 02_1987]
gi|289758594|ref|ZP_06517972.1| trigger factor protein tig [Mycobacterium tuberculosis T85]
gi|294994430|ref|ZP_06800121.1| trigger factor [Mycobacterium tuberculosis 210]
gi|297635068|ref|ZP_06952848.1| trigger factor [Mycobacterium tuberculosis KZN 4207]
gi|297732059|ref|ZP_06961177.1| trigger factor [Mycobacterium tuberculosis KZN R506]
gi|298525940|ref|ZP_07013349.1| trigger factor [Mycobacterium tuberculosis 94_M4241A]
gi|306804213|ref|ZP_07440881.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu008]
gi|306808783|ref|ZP_07445451.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu007]
gi|306972842|ref|ZP_07485503.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu010]
gi|307085146|ref|ZP_07494259.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu012]
gi|313659395|ref|ZP_07816275.1| trigger factor [Mycobacterium tuberculosis KZN V2475]
gi|6226229|sp|O53189|TIG_MYCTU RecName: Full=Trigger factor; Short=TF
gi|166229906|sp|A5U5F8|TIG_MYCTA RecName: Full=Trigger factor; Short=TF
gi|2791502|emb|CAA16039.1| PROBABLE TRIGGER FACTOR (TF) PROTEIN TIG [Mycobacterium
tuberculosis H37Rv]
gi|13882260|gb|AAK46837.1| trigger factor [Mycobacterium tuberculosis CDC1551]
gi|124601655|gb|EAY60665.1| trigger factor (tf) protein tig [Mycobacterium tuberculosis C]
gi|134150752|gb|EBA42797.1| trigger factor (tf) protein tig [Mycobacterium tuberculosis str.
Haarlem]
gi|148506449|gb|ABQ74258.1| trigger factor [Mycobacterium tuberculosis H37Ra]
gi|148722189|gb|ABR06814.1| trigger factor (tf) protein tig [Mycobacterium tuberculosis F11]
gi|253319962|gb|ACT24565.1| trigger factor protein tig [Mycobacterium tuberculosis KZN 1435]
gi|289438379|gb|EFD20872.1| trigger factor protein tig [Mycobacterium tuberculosis KZN 605]
gi|289686772|gb|EFD54260.1| trigger factor protein tig [Mycobacterium tuberculosis 02_1987]
gi|289714158|gb|EFD78170.1| trigger factor protein tig [Mycobacterium tuberculosis T85]
gi|298495734|gb|EFI31028.1| trigger factor [Mycobacterium tuberculosis 94_M4241A]
gi|308344889|gb|EFP33740.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu007]
gi|308349200|gb|EFP38051.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu008]
gi|308357770|gb|EFP46621.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu010]
gi|308365325|gb|EFP54176.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu012]
gi|323718968|gb|EGB28118.1| trigger factor protein tig [Mycobacterium tuberculosis CDC1551A]
gi|326904076|gb|EGE51009.1| trigger factor protein tig [Mycobacterium tuberculosis W-148]
gi|328458227|gb|AEB03650.1| trigger factor protein tig [Mycobacterium tuberculosis KZN 4207]
Length = 466
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 70/453 (15%), Positives = 187/453 (41%), Gaps = 23/453 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F +++ + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFAELEPDFQRAYKELAKQVRLPGFRPGKAPAKLLEARIGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +++ + + +++ D + RP+I + + E DL+ D
Sbjct: 61 EAMLDQIVNDALPSRYGQAVAESDVQPLGRPNIEVTKK---------EYGQDLQFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+I L V+ D E+ E ++D ++ + + +GD V++D +
Sbjct: 112 IRPKISPPDLSALTVSVDPIEIGEDDVDAELQSLRTRFGTLTAVDRPVAVGDVVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + + VGS L + + +VGL + + + AG++
Sbjct: 172 TVDGEDIPNAAAEGLSHEVGSGRLIAGLDDAVVGLSADESRVFTAKLAAG----EHAGQE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +++ V +++ A F+S +R S +++Q ++++ +
Sbjct: 228 AQVTVTVRSVKERELPEPDDEFAQLASEFDSIDELRASLSDQVRQAKRAQQAEQIRNATI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQK----VRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
D + + +PES V+ +++ +L + + + N+ S +
Sbjct: 288 DALLEQVDVPLPESYVQAQFDSVLHSALSGLNHDEARFNELLVEQGSSRAAFDAEARTAS 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V ++L + ++ ++V ++++ L ++ +++ + + N L + A
Sbjct: 348 EKDVKRQLLLDALADELQVQVGQDDLTERLVTTSRQYGIEPQQLF-GYLQERNQLPTMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDN 444
+ + I +++ + D + + F
Sbjct: 407 DVRRELAIRAAVEAATVTDSDGNTIDTSEFFGK 439
>gi|213966187|ref|ZP_03394373.1| trigger factor [Corynebacterium amycolatum SK46]
gi|213951202|gb|EEB62598.1| trigger factor [Corynebacterium amycolatum SK46]
Length = 487
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 89/471 (18%), Positives = 198/471 (42%), Gaps = 20/471 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + ++ V +P + L F+ + + + I GFR GK P I++ +G+
Sbjct: 31 KSSVEKLNETRVKITVEVPFDELKPEFDNAYKALAQQVQIPGFRKGKAPAKLIEARFGRG 90
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
IL + +++++ E++ + D + +P + I + +E ++ D+
Sbjct: 91 PILEQVLNDMVPSRYDEVVREEDLKVIGQPEVDITK---------LEDGELVEFTAEVDV 141
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ F+D+ V D DE+ ++ ++ + E E D V++D + +
Sbjct: 142 RPEIELPKFEDIAVEVDPLVADEEAVEAELQNLLARFGTLTGVERAVEKDDFVSIDLSAT 201
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D LE+ S + + + VGS DL E +VGL G+ KE + G+
Sbjct: 202 IDGEELEEASTEGLSYQVGSDDLIDGLDEAVVGLSQGESKEFTTKLVAG----EHEGEDA 257
Query: 241 RLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ +++ V ++D A + F++ ++ +++++ + Q+V+ ++L
Sbjct: 258 QVTVTVQSVKVRELPEADDDFAQMASEFDTIDELKEDLARQVENTKKGEQAQQVRDKVLA 317
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHMLAK 355
+ T +PE +V+ + G LQ++ + N + + E+ + A+
Sbjct: 318 AAMEQTTIALPEGVVKEQVEGQLQQLLGQFGGDEKVLNSMLEAQGTTREQFDEDSKKSAE 377
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
V T + L + E+ +V+++E+ + + + + Q+ L L A
Sbjct: 378 EAVRTQLFLDALAEEIKPDVSQQELTDHILFTAQSYGMDPNQFIQQIQQS-GQLGNLFAD 436
Query: 416 IFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
+ K + + D + L + E PE S K E +E
Sbjct: 437 VRRGKALATSILKASAKDTEGNEIDLNEYFGEVEPEAEKADSDKAEDTSAE 487
>gi|71901065|ref|ZP_00683175.1| Trigger factor [Xylella fastidiosa Ann-1]
gi|71729192|gb|EAO31313.1| Trigger factor [Xylella fastidiosa Ann-1]
Length = 431
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 93/447 (20%), Positives = 197/447 (44%), Gaps = 19/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V+ + L+R L +P +RL +ER+ +I A I GFR GKVP I+ +G+
Sbjct: 1 MPVLIESIGNLERRLTFSVPEDRLESHVDERLREIARTARINGFRAGKVPAKVIEQRFGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E +D +++E + + R A I L ++++
Sbjct: 61 KVRAEVLDSLLRETLDSAIRAHSLRLAGAARID------------HANEGGLNFVATFEV 108
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + +V + +ID+ + + + V E +++G V ++
Sbjct: 109 VPDFGEIDVSKLGVVRRTAKVTDVDIDQMIENLRLQRRTWRVAEHGAQVGYLVALETWSQ 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + + I+GS +F + L GL GD+ ++ FP+D + LAGK V
Sbjct: 169 AGDERLPIEGVEAGSTILGSGVMFEQIERGLEGLSKGDENVLDVTFPDDWRVMQLAGKAV 228
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
R++ + EV P+ + VN + G +S R +++ + + ++R+I
Sbjct: 229 RVHVKVIEVSEPVLLEVNEEFIKSFGVKSGRLEDFRADIRANLERELKGALVSHLRREIG 288
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVE E +L K ++ + + + I ++ + A +R
Sbjct: 289 EQLIAAYAHVEMPPRLVEKEARLMLAKQIEQIRLSGR---DPTVIPDDAHIGFMDAACKR 345
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G I +N + + + L+ + +++ ++ P + +++ +
Sbjct: 346 VLVGLLVGEIAGRNRLRLDPMRVTETLHLIASTY-EEPEEVFQMYRNDPKLMEGVQSLVM 404
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDN 444
E++VI+ I Q ++ ++F +
Sbjct: 405 EEQVIEWIADRAQKTEQVLSFQEAIQQ 431
>gi|189424988|ref|YP_001952165.1| trigger factor [Geobacter lovleyi SZ]
gi|238692097|sp|B3E1Z5|TIG_GEOLS RecName: Full=Trigger factor; Short=TF
gi|189421247|gb|ACD95645.1| trigger factor [Geobacter lovleyi SZ]
Length = 440
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 100/437 (22%), Positives = 201/437 (45%), Gaps = 10/437 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +KR + V +P+ R+ + I+ KA + GFR GK PL +K Y
Sbjct: 1 MQVKIEEISSVKRRISVEVPAERVNTEIEKSFAGIQKKATLAGFRKGKAPLQMVKKFYRN 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E + + ++ + L + P I L+E K +I
Sbjct: 61 AMQDEVMRRLYEQTLFPALDEHKLEPVDAPMID--------DIALVEEGTPFKYSALIEI 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYTV 179
+PQI + + LQV ++ DEK ++ ++ + +N E + +TVD++
Sbjct: 113 MPQILLGEYKGLQVKKERYVADEKAVEGEIERMRENMAQLAPVEEGTVEKGMVLTVDFSF 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+V E+ S K+ VG+ L E L+G+ G+ K+I P+D+ K+LAGK
Sbjct: 173 AVPGYPEEETSGKDASVEVGNGRLLPGLEEGLIGMALGETKDITVTMPDDNPNKELAGKP 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++KE+ +N++ A + FE+ + MR ++ +Q ++ +K +I+
Sbjct: 233 GVFTVTLKEIKKKELPELNDEFAQQFGDFETIADMRTKLTEMREQQELERIKTDLKTRII 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + K +VP+S+V + + +L+ ++ + N + + ++ Q + A ++V
Sbjct: 293 DALIEKNPLEVPDSMVRRQTDFMLENLKNRLKGQNMSLEMMGLDEDGYRQRFWGEAAQKV 352
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G+++ + E+ NI V E ++++ Q ++ + + NA + A I E
Sbjct: 353 KGGLLVMALVEQENIAVEEADLEARYAQIAAGNEDMLSRIKEFYAAQANARNSMVAEIKE 412
Query: 419 DKVIDHILKSVQIVDRK 435
DK I +L++ + + +
Sbjct: 413 DKAIAFLLENAVVTEVE 429
>gi|31793643|ref|NP_856136.1| trigger factor [Mycobacterium bovis AF2122/97]
gi|121638345|ref|YP_978569.1| trigger factor [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|215427845|ref|ZP_03425764.1| trigger factor [Mycobacterium tuberculosis T92]
gi|215431408|ref|ZP_03429327.1| trigger factor [Mycobacterium tuberculosis EAS054]
gi|219558459|ref|ZP_03537535.1| trigger factor [Mycobacterium tuberculosis T17]
gi|224990839|ref|YP_002645526.1| trigger factor [Mycobacterium bovis BCG str. Tokyo 172]
gi|260187468|ref|ZP_05764942.1| trigger factor [Mycobacterium tuberculosis CPHL_A]
gi|260201587|ref|ZP_05769078.1| trigger factor [Mycobacterium tuberculosis T46]
gi|260205766|ref|ZP_05773257.1| trigger factor [Mycobacterium tuberculosis K85]
gi|289443988|ref|ZP_06433732.1| trigger factor tig [Mycobacterium tuberculosis T46]
gi|289448105|ref|ZP_06437849.1| trigger factor protein tig [Mycobacterium tuberculosis CPHL_A]
gi|289570617|ref|ZP_06450844.1| trigger factor protein tig [Mycobacterium tuberculosis T17]
gi|289575156|ref|ZP_06455383.1| trigger factor protein tig [Mycobacterium tuberculosis K85]
gi|289751068|ref|ZP_06510446.1| trigger factor protein tig [Mycobacterium tuberculosis T92]
gi|289754570|ref|ZP_06513948.1| trigger factor [Mycobacterium tuberculosis EAS054]
gi|41018173|sp|Q7TYJ1|TIG_MYCBO RecName: Full=Trigger factor; Short=TF
gi|166229902|sp|A1KLF8|TIG_MYCBP RecName: Full=Trigger factor; Short=TF
gi|254789012|sp|C1AES9|TIG_MYCBT RecName: Full=Trigger factor; Short=TF
gi|31619236|emb|CAD97350.1| PROBABLE TRIGGER FACTOR (TF) PROTEIN TIG [Mycobacterium bovis
AF2122/97]
gi|121493993|emb|CAL72470.1| Probable trigger factor (tf) protein tig [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224773952|dbj|BAH26758.1| trigger factor [Mycobacterium bovis BCG str. Tokyo 172]
gi|289416907|gb|EFD14147.1| trigger factor tig [Mycobacterium tuberculosis T46]
gi|289421063|gb|EFD18264.1| trigger factor protein tig [Mycobacterium tuberculosis CPHL_A]
gi|289539587|gb|EFD44165.1| trigger factor protein tig [Mycobacterium tuberculosis K85]
gi|289544371|gb|EFD48019.1| trigger factor protein tig [Mycobacterium tuberculosis T17]
gi|289691655|gb|EFD59084.1| trigger factor protein tig [Mycobacterium tuberculosis T92]
gi|289695157|gb|EFD62586.1| trigger factor [Mycobacterium tuberculosis EAS054]
Length = 466
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 70/453 (15%), Positives = 188/453 (41%), Gaps = 23/453 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F +++ + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFAELEPDFQRAYKELAKQVRLPGFRPGKAPAKLLEARIGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +++ + + +++ D + RP+I + + E DL+ D
Sbjct: 61 EAMLDQIVNDALPSRYGQAVAESDVQPLGRPNIEVTKK---------EYGQDLQFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+I + L V+ D E+ E ++D ++ + + +GD V++D +
Sbjct: 112 IRPKISLPDLSALTVSVDPIEIGEDDVDAELQSLRTRFGTLTAVDRPVAVGDVVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + + VGS L + + +VGL + + + AG++
Sbjct: 172 TVDGEDIPNAAAEGLSHEVGSGRLIAGLDDAVVGLSADESRVFTAKLAAG----EHAGQE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +++ V +++ A F+S +R S +++Q ++++ +
Sbjct: 228 AQVTVTVRSVKERELPEPDDEFAQLASEFDSIDELRASLSDQVRQAKRAQQAEQIRNATI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQK----VRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
D + + +PES V+ +++ +L + + + N+ S +
Sbjct: 288 DALLEQVDVPLPESYVQAQFDSVLHSALSGLNHDEARFNELLVEQGSSRAAFDAEARTAS 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V ++L + ++ ++V ++++ L ++ +++ + + N L + A
Sbjct: 348 EKDVKRQLLLDALADELQVQVGQDDLTERLVTTSRQYGIEPQQLF-GYLQERNQLPTMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDN 444
+ + I +++ + D + + F
Sbjct: 407 DVRRELAIRAAVEAATVTDSDGNTIDTSEFFGK 439
>gi|15837788|ref|NP_298476.1| trigger factor [Xylella fastidiosa 9a5c]
gi|12230731|sp|Q9PE42|TIG_XYLFA RecName: Full=Trigger factor; Short=TF
gi|9106154|gb|AAF83996.1|AE003952_7 peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa 9a5c]
Length = 431
Score = 211 bits (535), Expect = 3e-52, Method: Composition-based stats.
Identities = 90/447 (20%), Positives = 197/447 (44%), Gaps = 19/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V+ + L+R L +P +RL +ER+ +I A I GFR GKVP I+ +G+
Sbjct: 1 MPVLIESIGNLERRLTFSVPEDRLESHVDERLREIARTARINGFRAGKVPAKVIEQRFGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E +D +++E + + R A I L ++++
Sbjct: 61 KVRAEVLDSLLRETLDSAIRAHSLRLAGAARID------------HANEGRLNFVATFEV 108
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P V + V + +ID+ + + + V E +++G V ++
Sbjct: 109 VPDFGEIDVSKFSVVRRTARVTDVDIDQMIENLRLQRRTWRVAEHGAQVGHLVALETWSQ 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + + I+GS +F + L GL GD+K ++ FP+D + LAGK V
Sbjct: 169 AGDERLPIEGVEAGSTILGSGVMFEQIERGLEGLSKGDEKVLDVTFPDDWRVTQLAGKAV 228
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ + EV P+ + VN + G +S R +++ + + ++R++
Sbjct: 229 QVHVKVIEVSEPVLLEVNEEFIKSFGVKSGKLEDFRADIRANLERELKGALVSHLRREVG 288
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVE E +L K ++ + + + I ++ + A +R
Sbjct: 289 EQLIAAYAHVEMPPRLVEKEARLMLAKQIEQIRLSGR---DPTGIPDDAHIGFMDAACKR 345
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G I +N + + + L+ + +++ + ++ P + +++ +
Sbjct: 346 VLVGLLVGEIAGRNRLRLDPMRVTETLHLIASTY-EEPEEVFEMYRNDPKLMEGVQSLVM 404
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDN 444
E++VI+ I + ++ ++F +
Sbjct: 405 EEQVIEWIADRAKKTEQVLSFQEAIQQ 431
>gi|169628670|ref|YP_001702319.1| trigger factor (TF) [Mycobacterium abscessus ATCC 19977]
gi|238688925|sp|B1MMV3|TIG_MYCA9 RecName: Full=Trigger factor; Short=TF
gi|169240637|emb|CAM61665.1| Trigger factor (TF) [Mycobacterium abscessus]
Length = 490
Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats.
Identities = 79/453 (17%), Positives = 191/453 (42%), Gaps = 23/453 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F++ +++ + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEKLSPTRVRINVEVPFAELEPDFSKAYKELAQQVRLPGFRPGKAPAKLLEARVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + ++ + E ++ D + +P I + + IE +L D
Sbjct: 61 AAVLEQVVNAALPARYSEAVTASDVKPLGQPEIEVTK---------IEDGQELTFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ + VT V++ E++ ++ + + E +E GD V++D +
Sbjct: 112 VRPEIELPDLSGVAVTVKPVTVEDSEVEAELDALRARFGTLKGVERAAENGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD +E+ + + +GS L E ++GLK G++K + + AG++
Sbjct: 172 TVDGKEVEEAATTGLSHEIGSGQLIDGLDEAIIGLKAGEEKVFT----TKLAAGEFAGQE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + ++D A F++ ++ ++++K +++ + +
Sbjct: 228 AEVTVKVGSIKERELPDADDDFAQLASEFDTIGELKDSLTEQVKGRKRIAQADEIRDETI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHMLA 354
+ +K VPE ++E + L + + N+ Q S EE + A
Sbjct: 288 TALLDKIEIPVPEKILEEQIGNNLHEAVHGLDHNEERLNELLQEQGSSREEFDKDMRESA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + T ++L I +K +I V ++++ L ++ ++++ + + L L
Sbjct: 348 TKSIKTELLLDVIADKFDINVDQQDLTERLVLMSRQYGIEPQQLVQYLTQ-QQQLPGLYV 406
Query: 415 PIFEDKVIDHILKSVQIVDRK---VTFDQLFDN 444
+ K I +++ ++ D V D +
Sbjct: 407 DVRRGKAIAEVIRQAKVTDSTGADVDVDAVLGP 439
>gi|117927944|ref|YP_872495.1| trigger factor [Acidothermus cellulolyticus 11B]
gi|166229006|sp|A0LSU9|TIG_ACIC1 RecName: Full=Trigger factor; Short=TF
gi|117648407|gb|ABK52509.1| trigger factor [Acidothermus cellulolyticus 11B]
Length = 449
Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats.
Identities = 83/464 (17%), Positives = 179/464 (38%), Gaps = 21/464 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + V + + L + + + + GFRPGKVP I G+
Sbjct: 1 MKSAVETLSPTRVKFTVEVGFDELQPTVAAAYRKVAEQVRVPGFRPGKVPPPIIDRRIGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + +++ I + + + + +P I + L D
Sbjct: 61 GVVLEQALNDAIPQFYGQAVDEAAVAVISQPEIEVT---------NFADGEGLTFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P IE+ + + VT D V + ++D ++A +A + + + GD VT+D TV
Sbjct: 112 VRPTIELPDPESITVTVDPVTVSDADVDAELAALADRFATLKPVDRPARRGDFVTIDMTV 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D +LED + + VGSA L E L GL G E + + AG+
Sbjct: 172 RLDGEVLEDGTVTGASYEVGSAQLVEGLDEALEGLTAGQSAEFDAPLAGPY-----AGRT 226
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
R +++ V +++ A + F++ +R ++I + + + ++L
Sbjct: 227 ARAEVTVRAVREKQVPALDDAFAQQASEFDTLEELRAHIRERIGRTRRIQQHVQARERLL 286
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ----NVDSIDEEDLQYYHMLA 354
+ + VPE +V+ E +++R + ++ + +
Sbjct: 287 QTLLDSLDIPVPERIVDAEVRSRAEQLRRYAEARGMDAEGLLAQQGESLHDHEAHVRADV 346
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+R + +L T+ + +++ E E+ L Q+ R + + N + A
Sbjct: 347 ERELRVQFLLDTVVAREQLQLQEAELTDYLIQRATRLGVSPDDYANQLVRT-NTVPLAVA 405
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSS 458
K + ++L+ V++VD L S+ ++ + +
Sbjct: 406 DALRGKALTYLLQRVRVVDTTGAPVNLEGGSTPAAEAEPAVSEA 449
>gi|308378021|ref|ZP_07481276.2| trigger factor protein tig [Mycobacterium tuberculosis SUMu009]
gi|308353821|gb|EFP42672.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu009]
Length = 483
Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats.
Identities = 69/452 (15%), Positives = 186/452 (41%), Gaps = 23/452 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + ++V +P L F +++ + + GFRPGK P +++ G+
Sbjct: 19 KSTVEQLSPTRVRINVEVPFAELEPDFQRAYKELAKQVRLPGFRPGKAPAKLLEARIGRE 78
Query: 62 IL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + +++ + + +++ D + RP+I + + E DL+ DI
Sbjct: 79 AMLDQIVNDALPSRYGQAVAESDVQPLGRPNIEVTKK---------EYGQDLQFTAEVDI 129
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I L V+ D E+ E ++D ++ + + +GD V++D + +
Sbjct: 130 RPKISPPDLSALTVSVDPIEIGEDDVDAELQSLRTRFGTLTAVDRPVAVGDVVSIDLSAT 189
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + + + + + VGS L + + +VGL + + + AG++
Sbjct: 190 VDGEDIPNAAAEGLSHEVGSGRLIAGLDDAVVGLSADESRVFTAKLAAG----EHAGQEA 245
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ +++ V +++ A F+S +R S +++Q ++++ +D
Sbjct: 246 QVTVTVRSVKERELPEPDDEFAQLASEFDSIDELRASLSDQVRQAKRAQQAEQIRNATID 305
Query: 300 YISNKYTFDVPESLVENEYNGILQK----VRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
+ + +PES V+ +++ +L + + + N+ S ++
Sbjct: 306 ALLEQVDVPLPESYVQAQFDSVLHSALSGLNHDEARFNELLVEQGSSRAAFDAEARTASE 365
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ V ++L + ++ ++V ++++ L ++ +++ + + N L + A
Sbjct: 366 KDVKRQLLLDALADELQVQVGQDDLTERLVTTSRQYGIEPQQLF-GYLQERNQLPTMFAD 424
Query: 416 IFEDKVIDHILKSVQIVDR---KVTFDQLFDN 444
+ + I +++ + D + + F
Sbjct: 425 VRRELAIRAAVEAATVTDSDGNTIDTSEFFGK 456
>gi|313903082|ref|ZP_07836476.1| trigger factor [Thermaerobacter subterraneus DSM 13965]
gi|313466584|gb|EFR62104.1| trigger factor [Thermaerobacter subterraneus DSM 13965]
Length = 493
Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats.
Identities = 75/436 (17%), Positives = 178/436 (40%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E + L V + + + + + + I GFR G+ P ++ GK
Sbjct: 1 MKATVEKIENRRATLTVEVEPEAVARALDHAYRHLVRRVQIPGFRKGRAPRFLVERHLGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +D ++ E +++ RP + I L+ +
Sbjct: 61 AALFEEALDHLLPEAYSRAVAETGIEPIDRPQLNIET---------FSEEQGLRFTAEVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDY 177
+ P++++ + L+V + V E+++ R++ + E ++ +E G +D
Sbjct: 112 VKPEVDLGDYRSLRVEVPVATVTEEDVQRELERWRELRATLEPAGEDAVAEKGMVAVLDL 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
++D + + ++ +G+ L E ++G++ G++KE+ FP DH + L G
Sbjct: 172 EGTLDGQPIPNGQAEDYAVELGAGRLLDGVEEQILGMRPGEEKEVPVTFPADHPGESLRG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGF-ESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K + +KE+ + ++++ A + S +R +++ + +E R ++RQ
Sbjct: 232 KTATFHIRLKELKRKVLPPLDDEFAQEVAGLSSLQELRAQVEKELTRIAEEQARADLRRQ 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
++ + +VPE+LV + + + + Q + E+ +
Sbjct: 292 VVQKVVEGARLEVPETLVRRQVEDRINSLENRLRRQGDSLESYLQATNQTREQLAESLRP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A V T +VL + + IE T+ E+++ L +++ F + + ++
Sbjct: 352 QAVEDVRTDLVLDAVAKAEGIEATDAEIEAELRSLAAAMGQPYQRVRQQFTRS-GLVLDV 410
Query: 413 RAPIFEDKVIDHILKS 428
I K ID +++
Sbjct: 411 AENIRRRKTIDWLVER 426
>gi|327439424|dbj|BAK15789.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Solibacillus
silvestris StLB046]
Length = 429
Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats.
Identities = 85/439 (19%), Positives = 183/439 (41%), Gaps = 20/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + + + ++ + + + N+ GFR GK+P + + +YG
Sbjct: 1 MSVKWEKQEGNEGLLTVTVEAAEVDKALDQAFKKVVKQINVPGFRKGKMPRNVFEKMYGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ++ +I P L + P I E D +
Sbjct: 61 EALYQDALEIVINSSYPVALDEAGIEPVDYPEIAGTE--------NFAKGTDFTYTATVT 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P+ ++ + L+VT+ EV ++E+ + E ++ GD +D+
Sbjct: 113 VKPEPKLGEYKGLEVTKQSAEVTDEEVQSLIDAQLAKKAELEIKEDEAIVEGDTAVIDFE 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V E ++ +GS E LVG KTG+ K++ FPE++ +LAGK
Sbjct: 173 GFVGEEAFEGGKGEDYALEIGSGSFIPGFEEQLVGAKTGETKDVVVTFPEEYHAAELAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + ++KEV + + + ++ A E+ A+R + + E V ++ +
Sbjct: 233 EAKFVVTVKEVKTKVLPDLTDEFAKEIDPEVETVEALRTKLKETTLANKEADVEASLRDE 292
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
+++ + ++P+ ++ E + ++Q+ + Q +E
Sbjct: 293 LVEKAAANAEVEIPQGMINTEVDRMVQEFGQRLQMQGMNLDLYYQFSGQNEEALRTQMAE 352
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV +VL IG+ NIEV+EE++ + + + +F ++L L
Sbjct: 353 EAVNRVRVSLVLEAIGQAENIEVSEEDINTEVEKMAAQFGMSNDQILTAL----GGTQVL 408
Query: 413 RAPIFEDKVIDHILKSVQI 431
I K ++ ++++ +I
Sbjct: 409 ENDIRTQKTVEFLVENAKI 427
>gi|94266602|ref|ZP_01290284.1| Trigger factor [delta proteobacterium MLMS-1]
gi|93452773|gb|EAT03311.1| Trigger factor [delta proteobacterium MLMS-1]
Length = 448
Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats.
Identities = 80/436 (18%), Positives = 178/436 (40%), Gaps = 14/436 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + L + L+V +P + + ++ + ++KGFR GKVP ++ YG+
Sbjct: 1 MQVSVEDVSNLTKRLEVTLPPELVGKELDAAYNKLKGEVDLKGFRKGKVPRKVLEKNYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + D +I+E + L + A + P I E + D+
Sbjct: 61 KVQYDVADRLIQETYFDALEQVSIDAVVHPEI---------RDHRFEDDGGFIYQAEVDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
P E+ + ++V V E E+D ++ ++ + E GD +D+T
Sbjct: 112 RPAFELGEYKGVEVEIPEITVGEDEVDAELEKLRQQLAPLRTVEDRREVADGDIAVIDFT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+++ + VGS + E LVGL G+Q + FP LAGK
Sbjct: 172 AYDQGELMKQVGGNDFSVDVGSGQIGPEFEGKLVGLVVGEQSTVTIDFPAGFGNPILAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++KE+ + ++++ A F + + +R + Q + R + +
Sbjct: 232 SIEFKITVKEIKERVLPELDDEFARDAGEQFTTLAELREHIRSQRLQEMQDKRRGDLVDR 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++ I + F+VP LV +E + +++++ + + + + ++ Y A++
Sbjct: 292 VMKRILEGHQFEVPPRLVAHEIDSMIKELETNLENQGLSLEAAGINRDSLVEKYRDAAEK 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R+ +L I + I+V +E++ + ++ ++ +F + +
Sbjct: 352 RIRGDFILKKIADLEEIKVADEDINKGFQRIADQYNMPVAEVKKYFHSRNELMP-FMHEL 410
Query: 417 FEDKVIDHILKSVQIV 432
+K++D ++ + I
Sbjct: 411 LTEKILDFLVDAANIK 426
>gi|312195809|ref|YP_004015870.1| trigger factor [Frankia sp. EuI1c]
gi|311227145|gb|ADP80000.1| trigger factor [Frankia sp. EuI1c]
Length = 472
Score = 210 bits (533), Expect = 5e-52, Method: Composition-based stats.
Identities = 82/440 (18%), Positives = 183/440 (41%), Gaps = 20/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ ++ + +L V +P + L S + + + + + GFRPGKVP + G+
Sbjct: 1 MKATKESLSPTRVKLTVEVPFDDLKPSLDATYKKLSRQIRVSGFRPGKVPPRILDQRLGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
S IL E + E + + E + D RP + + E + D
Sbjct: 61 STILDEALQEALPQFYSEAVEAEDVDVLSRPEVDVTE---------FAEGSPIVFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ PQ+ + D +++T D EV +++ID Q+ + + E GD V++D +
Sbjct: 112 VRPQLALPEADSVKITVDKIEVTDEQIDTQLGSMRERFAVLTPVERPVATGDYVSLDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD +ED + + + VGS +L E L+G GD + + + D G+
Sbjct: 172 TVDGEPVEDATATGMSYEVGSGNLIEGIDEALIGASEGDSRTFD----TELLAGDRQGQT 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++ V +++D A F++ ++ Q+++Q ++ + + ++L
Sbjct: 228 AQVTAVVRGVKEKELPALDDDFATTASEFDTLDELKADLRQRLEQTRKYEQVNQAREKLL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY----HMLA 354
+ + VP+S++E+E ++ ++ + E++ + + A
Sbjct: 288 EQLIESVDVPVPDSVLESEIEAREHRLGHDLERYGVDRETYLKTLEQEPEEFDAQVRESA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF-QKYPNALAELR 413
+ + + +L T+ ++ + + E+ + R ++ L L
Sbjct: 348 TKAIKSQFILDTVVRAESVGIDQGELMEQIVMLAQRSGVAPEQYAQQLAGGNGAGLTALM 407
Query: 414 APIFEDKVIDHILKSVQIVD 433
+ I +K + H+L+ +VD
Sbjct: 408 SDIMRNKALLHLLRQATVVD 427
>gi|297616501|ref|YP_003701660.1| trigger factor [Syntrophothermus lipocalidus DSM 12680]
gi|297144338|gb|ADI01095.1| trigger factor [Syntrophothermus lipocalidus DSM 12680]
Length = 442
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 82/437 (18%), Positives = 191/437 (43%), Gaps = 20/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E + L++ +P ++++++ N+ + ++ GFR G+VP ++S +GK
Sbjct: 1 MGSKLERIEKNEVALEIEVPGDKVSEALNKAYRRVVKDVSVPGFRKGRVPRPVLESYFGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I E ++E++ E + + D P I + + E L +
Sbjct: 61 EILYEEALNELLPVAYEEAVKENDLTPVTEPQIDVVQM---------EEGKPLVFKARVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDY 177
+ P++ + + ++VT V E+++D+++ + + + + D + +D+
Sbjct: 112 VKPEVVLGQVEGIEVTTSPITVTEEDVDKRLEAMRERYARLVKVQDDVTAQEGDVLRIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D ++ +GS E LVG KTG++KEI+ FPED+ +DLAG
Sbjct: 172 EGFIDGEPFPGGKGEDYSLELGSRTFIPGFEEQLVGTKTGEEKEIKVQFPEDYHSQDLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ ++ E+ +N++ A FE+ +R + + + +E +Q + +
Sbjct: 232 KEAMFKVNVHEIKRRELSPLNDEFAQEVSEFETLEELREEIRKNLTKMAEERTKQLRRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
++ D+ +++E + + +L+ + ++ ++ ++ E + Y
Sbjct: 292 VVAKAVESAEVDIHPAMIEEQIDSMLESFQQRLAQQGLTLEDYTNVTGTSLETIREDYAQ 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ + +VL + + +E TEE+ Q L + G F ++ + +
Sbjct: 352 EAEKTLRANLVLEKVAREKGLEPTEEDFQQHLQRVAGDFGMDADQLRERVAASRGR---I 408
Query: 413 RAPIFEDKVIDHILKSV 429
I DK +D++L++
Sbjct: 409 EYGIMLDKAVDYLLENA 425
>gi|225175201|ref|ZP_03729197.1| trigger factor [Dethiobacter alkaliphilus AHT 1]
gi|225169377|gb|EEG78175.1| trigger factor [Dethiobacter alkaliphilus AHT 1]
Length = 438
Score = 209 bits (532), Expect = 6e-52, Method: Composition-based stats.
Identities = 92/441 (20%), Positives = 197/441 (44%), Gaps = 16/441 (3%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
V + +G K L++ + + D+ N+ + + + ++ GFR GKVP ++S +G +
Sbjct: 2 VKVEKIDGSKVALEIEVEQPVVEDALNQAYKKVVKQVSLPGFRKGKVPRPILESRFGPEV 61
Query: 63 -LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
E ++ ++ + + + RP I + + E + + ++
Sbjct: 62 LYEEALEIMVPDAYDNAVEEAGIEPIDRPEIDLVQM---------EKGKPFIFKATVEVK 112
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++E+ + ++VT+++ E+ E ++++++ + +V V + E GD +D+T
Sbjct: 113 PEVELGEYRGVEVTRELKEITEDDVEKKLDAMRHEHVKMHVVDGAVEQGDLAVIDFTGYK 172
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D E S + VGS E +VG+K G++K+I+ FPED+ +DLAGK V
Sbjct: 173 DGEPFEGGSAEGHSLEVGSGSFIPGFEEQVVGMKAGEEKDIDVTFPEDYHSEDLAGKPVT 232
Query: 242 LNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++EV +N+D A F + + ++ K+K+ E + V+ +++
Sbjct: 233 FKVKVQEVKRKEYPELNDDFAAEVSEFGTLAELKEDVLNKLKEEEENRAKTVVEEKVVQA 292
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHMLAKR 356
++ VP+ +VE E + + ++ + + E+ + A +
Sbjct: 293 VAANSEAPVPDPMVEREIDRMTGEMEQFLRMQGLTLEKFTSLTGKTMEDLREEKREEAGQ 352
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV +VL I EK IE T+EE++ + + + + + + + LR I
Sbjct: 353 RVKANLVLDAIIEKEGIEATDEEVEERIEKFAESYG-QPVETIKEYFEAQGQSNVLRQEI 411
Query: 417 FEDKVIDHILKSVQIVDRKVT 437
K +D +++ +I D +
Sbjct: 412 KFRKAVDFLMEEAKITDVAAS 432
>gi|254392449|ref|ZP_05007630.1| trigger factor [Streptomyces clavuligerus ATCC 27064]
gi|326440933|ref|ZP_08215667.1| trigger factor [Streptomyces clavuligerus ATCC 27064]
gi|197706117|gb|EDY51929.1| trigger factor [Streptomyces clavuligerus ATCC 27064]
Length = 466
Score = 209 bits (531), Expect = 7e-52, Method: Composition-based stats.
Identities = 91/477 (19%), Positives = 191/477 (40%), Gaps = 24/477 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + ++ E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKLYTEAVNEAEISPLGQPEVDITE---------LKDGETLNFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P IEI + +++T D EV ++++++ + E+ + E + GD +TVD
Sbjct: 112 IRPTIEIPDYSGIEITVDAIEVTDEDVEKAVEELRGRFASTTPVERAAGDGDVITVDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +L+D + V + +GS +L E + GL+ G E F AGK
Sbjct: 172 KVDGEVLQDGVAEGVSYTIGSGELLDGIDEAVKGLEAG----GEATFTSQLKGGSAAGKD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V +++D A F++ ++ +++ ++ + + ++L
Sbjct: 228 AEVTVKVTAVAQRELPELDDDFAQLASEFDTLEELKADSRKRLTTMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-----QKSQNVDSIDEEDLQYYHML 353
+ + +PE L+E+E N + + + EE
Sbjct: 288 EELLKLVEIPMPEKLLEDEVNTRKHNLEHHQLGQMGLDLAKYLEIQGKSQEEFDTETQEA 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T +L + K + V +EE+ L ++ + + N + L
Sbjct: 348 AVKGIKTQFILDELVSKEQLNVNQEELTEHLMRRAASSGMSPDQFAKAVVE-GNQVQVLV 406
Query: 414 APIFEDKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEE 467
+ K + +++S ++VD V D + E++ E + E E+
Sbjct: 407 GEVARGKALALVVESAKVVDTNGETVDMSDDEDETVEAAAETVESVVDGDEAKGEEK 463
>gi|240170933|ref|ZP_04749592.1| trigger factor [Mycobacterium kansasii ATCC 12478]
Length = 500
Score = 209 bits (531), Expect = 8e-52, Method: Composition-based stats.
Identities = 80/480 (16%), Positives = 197/480 (41%), Gaps = 23/480 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F +++ + + GFRPGK P+ +++ +G+
Sbjct: 1 MKSSVEHLSPTRVRINVEVPFEELEPDFQRAYKELAKQVRLPGFRPGKAPIRLLEARFGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +++ + + L++ + + RP I + E DL D
Sbjct: 61 EAMLDQIVNDALPSRYGQALAESEIQPLGRPDIEVTRK---------EYGQDLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ PQI + L V+ + EV + +++ ++ + E +GD VT+D T
Sbjct: 112 VRPQITLPDLGQLTVSVESIEVSDDDVETELQSLRVRFGTLNPVERPVAVGDFVTIDLTA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + + VGS L + + +VGL + + + AG+
Sbjct: 172 TVDGEEVPNAAAEGLSHEVGSGRLIAGLDDAIVGLSVDESRVFTAKLAAG----EHAGRD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V +++ A F++ +R +++ Q ++++ +
Sbjct: 228 AEVTVTVKSVKERELPDPDDEFAQLASEFDTIEELRENLREQVLQAKRAQQAEQIRNATI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQK----VRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
D + + VPES V+ +Y+ ++ + + + N+ S E +
Sbjct: 288 DTLLEQVDVPVPESYVQAQYDSVIHSALSGINHDEARFNELLAEQGSSREAFDAEARSAS 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V ++L + ++ ++V +E++ L ++ +++ + Q+ N L + A
Sbjct: 348 EKDVKRQLLLDALADELKVQVGQEDLTERLLTTSRQYGVEPQQLFAYLQEN-NQLPSMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ + + + ++ + D + +LF S E+S E + + P+E
Sbjct: 407 DVRRELAVRAVARAATVTDSDGNTIDTGELFGTSPEASEEPDAGAEETPAGAEDSDVPAE 466
>gi|332669943|ref|YP_004452951.1| trigger factor [Cellulomonas fimi ATCC 484]
gi|332338981|gb|AEE45564.1| trigger factor [Cellulomonas fimi ATCC 484]
Length = 466
Score = 209 bits (531), Expect = 9e-52, Method: Composition-based stats.
Identities = 80/478 (16%), Positives = 184/478 (38%), Gaps = 28/478 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E K +L V + + L S + + I + N+ GFR GKVP I G+
Sbjct: 1 MKSAVETLEPTKVKLTVEVTYDELKPSIDHAYQHIAEQVNVPGFRKGKVPPRIIDQRVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ ++E + E + + R +P + + + + E +L +
Sbjct: 61 PAVIEHAVNEGLSGFYAEAVRENKLRPLGQPEVEVTKVPGLV---PGEDAGELHFTAEVE 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + + D L +T D EV ++++ ++ + + + + GD V +D T
Sbjct: 118 VRPEITVPALDGLTLTVDDVEVSDEDVQGRLDALRERFGTLVGVDRPAAEGDFVVLDLTA 177
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
S+D ++ S V + +GS ++ E L GL G+ E + + AG++
Sbjct: 178 SIDGEEVDSVSG--VSYQIGSGNMLEGLDEALTGLSAGETTTFETAL----AGGERAGEQ 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ + V ++D A F++ + ++ + + + +L
Sbjct: 232 AQVSVTATTVKERQLPDADDDFAQLASEFDTLEELTADLREQAGRIKASNQAVQARDLLL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP+ +++ E + L+ D+E A +
Sbjct: 292 EKLLEGTEIPVPQGVIDAEVHRHLEG-------------EGRLEDDEHRTEVGEQATTAL 338
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L T+ E+ I+++++E+ L ++ + + + + A +
Sbjct: 339 RNQILLDTLAEQLEIKISQQELLDYLVSASRQYGMDPNTFIQTVDQ-QGQIPAMVAEVAR 397
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
K + L+ V +VD V + E + + ++ + S +S
Sbjct: 398 SKALAVALRRVAVVDGAGAAVDLSEYIGTDEEDAAADAAEAVAEQGATDAATDISALS 455
>gi|71276510|ref|ZP_00652785.1| Trigger factor [Xylella fastidiosa Dixon]
gi|71900579|ref|ZP_00682706.1| Trigger factor [Xylella fastidiosa Ann-1]
gi|170729731|ref|YP_001775164.1| trigger factor [Xylella fastidiosa M12]
gi|238687958|sp|B0U5N0|TIG_XYLFM RecName: Full=Trigger factor; Short=TF
gi|71162687|gb|EAO12414.1| Trigger factor [Xylella fastidiosa Dixon]
gi|71729636|gb|EAO31740.1| Trigger factor [Xylella fastidiosa Ann-1]
gi|167964524|gb|ACA11534.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa M12]
Length = 431
Score = 209 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 91/447 (20%), Positives = 196/447 (43%), Gaps = 19/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V+ + L+R L +P +RL +ER+ +I A I GFR GKVP I +G+
Sbjct: 1 MPVLIESIGNLERRLTFSVPEDRLESHVDERLREIARTARINGFRAGKVPAKVIGQRFGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E +D +++E + + R A I L ++++
Sbjct: 61 KVRAEVLDSLLRETLDSAIRAHSLRLAGAARID------------HANEGGLNFVATFEV 108
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + +V + +ID+ + + + V E +++G V ++
Sbjct: 109 VPDFGEIDVSKLGVVRRTAKVTDVDIDQMIENLRLQRRTWRVAEHGAQVGYLVALETWSQ 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + + I+GS +F + L GL GD+ ++ FP+D + LAGK V
Sbjct: 169 AGDERLPIEGVEAGSTILGSGVMFEQIERGLEGLSKGDENVLDVTFPDDWRVMQLAGKAV 228
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ + EV P+ + VN + G +S R +++ + + ++R++
Sbjct: 229 QVHVKVIEVSEPVLLEVNEEFIKSFGVKSGKLEDFRADIRANLERELKGALVSHLRREVG 288
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVE E +L K ++ + + + I ++ + A +R
Sbjct: 289 EQLIAAYAHVEMPPRLVEKEARLMLAKQIEQIRLSGR---DPTGIPDDAHIGFMDAACKR 345
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G I +N + + + L+ + +++ ++ P + +++ +
Sbjct: 346 VLVGLLVGEIAGRNRLRLDPMRVTETLHLIASTY-EEPEEVFQMYRNDPKLMEGVQSLVM 404
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDN 444
E++VI+ I Q ++ ++F +
Sbjct: 405 EEQVIEWIADRAQKTEQVLSFQEAIQQ 431
>gi|152967461|ref|YP_001363245.1| trigger factor [Kineococcus radiotolerans SRS30216]
gi|189035942|sp|A6WDU2|TIG_KINRD RecName: Full=Trigger factor; Short=TF
gi|151361978|gb|ABS04981.1| trigger factor [Kineococcus radiotolerans SRS30216]
Length = 471
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 76/475 (16%), Positives = 191/475 (40%), Gaps = 31/475 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + V + + L S ++ + I + + GFR GKVP I +G+
Sbjct: 1 MKSDVETLNPTRVKFTVEVGYDELKPSLDKAYKTIAGQVQVPGFRKGKVPPRVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + + + D +P++ +++ + + DLK + D
Sbjct: 61 AAVLEEAVNDALPKFYQQAVEASDFLPLGQPTVDVSQ------APDPKDGGDLKFSVEVD 114
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P +E+ + + VT D +V E+E++ ++ + + + + GD V++D
Sbjct: 115 VRPVLELPDLESIAVTVDDLQVPEEEVETRLTALRERFGTLTGVDRPAADGDFVSIDLRA 174
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D +E + K + + +G ++ E L G+ E F + + G+
Sbjct: 175 EIDGEEIE--TAKGISYRIGQGNMIEGLDEALTGVAA----EGSTTFTAPLAGGERKGQD 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V + ++D A F++ +R +++Q +F + + ++L
Sbjct: 229 ASITVTVQSVKERVLPEADDDFAQLASEFDTLEELRADLLSQVEQSKKFEQGLQARDKVL 288
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VPESLVE E + L++ D E ++ +
Sbjct: 289 EKLLETVEVPVPESLVEAEIHAHLER-------------ESRLEDAEHRAEIEDSTRQAI 335
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ ++L + ++ I V + E+ L Q ++ ++ + + + + +
Sbjct: 336 RSQLLLDALADREEIGVEQGELIEYLVGQAQQYGMEPQQFVQMVDG-AGQVPSMVSEVRR 394
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
K + ++ + D V ++L + E + + + +EE +
Sbjct: 395 RKALAVAMEKATVTDASGNPVDLEELVGGTEEDDVTEDATEDVTEDAAPAEEGQT 449
>gi|138896219|ref|YP_001126672.1| trigger factor [Geobacillus thermodenitrificans NG80-2]
gi|134267732|gb|ABO67927.1| Trigger factor [Geobacillus thermodenitrificans NG80-2]
Length = 440
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 80/439 (18%), Positives = 183/439 (41%), Gaps = 21/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + ++ + + + ++ GFR GKVP + +G
Sbjct: 13 MSVKWEKLEGNEGVLTVEVDAEQVNKGLDAAFKKVVKNVSLPGFRKGKVPRVLFEKRFGV 72
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E + + + P I I + E L +
Sbjct: 73 EALYQDALDILLPEAYAKAVEEAGIEPVSMPEIDIEQM---------EKGKSLIFKAKVT 123
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L+V + V +++++ ++ + +N VKE + D +D+
Sbjct: 124 VKPEVKLGQYKGLEVEKIDTTVTDEDVENKLKRLQENYAELVVKEEGTVENGDTAVIDFE 183
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS + LVG+K G++KEI+ FPE++ + LAGK
Sbjct: 184 GFVDGEPFEGGKAENYSLEIGSGTFIPGFEDQLVGMKAGEEKEIQVTFPEEYHAEQLAGK 243
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++ A E+ ++ ++++ + V+
Sbjct: 244 PATFKVKVHEVKAKQLPALDDEFAKDVDEEVETLDELKSKIRTRLEEAKKNEAEAAVRNA 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+++ + D+P +V+NE + +L++ + Q + +
Sbjct: 304 VVEKAAANAEIDIPAVMVQNETDRMLREFDQRLQMQGMNLQLYYQFSGQDEAALREQMKE 363
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I + NI+VT+EE+ L + + K+ + L +
Sbjct: 364 DAEKRVRAALTLEAIAKAENIDVTDEEVNEELEKMAASYNLSVDKLKELI----GNLDGV 419
Query: 413 RAPIFEDKVIDHILKSVQI 431
+ + K +D +++ +
Sbjct: 420 KEDLKWRKTVDFLVEHSTV 438
>gi|218885217|ref|YP_002434538.1| trigger factor [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|226695522|sp|B8DNL3|TIG_DESVM RecName: Full=Trigger factor; Short=TF
gi|218756171|gb|ACL07070.1| trigger factor [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 432
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 98/438 (22%), Positives = 185/438 (42%), Gaps = 13/438 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +K+++++ +P + + + I R+ ++ GFR GKVP + ++S + K
Sbjct: 1 MEYTVEDLSPVKKKVNISVPVEEVEAALSAAIAMYRTNMSLDGFRKGKVPSNLVESRFRK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +++ + E+++ D R D G +E + +S+++
Sbjct: 61 EIYGEATQDLVNVHINEVMTALDANPISR---------IDFDGGQLERGTPFEYSISFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE--IGDKVTVDYT 178
LP+ ++ +D V Q+ VD KE+D + I N GD V +D+
Sbjct: 112 LPEFDLPDYDGFAVEQEKAVVDMKEVDEVITRIRTNMAELVPVAEARPGKDGDVVVLDFA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ +E S +N Q +G + ++ L G + E FP D D AGK
Sbjct: 172 AFENGEPVEGISAENFQMNLGDRQALEDFENLVKTLAPGQEGEGPLNFPADFINPDFAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + + V N++LA GFES MR + Q LV+ ++ +
Sbjct: 232 SLTVKVKVHAVKERRLPEANDELAQKAGGFESMDKMREAVTSSYMQSRTQLVKATAQKTM 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + F +PES+V+ +L +R ++ + +++ EE A++
Sbjct: 292 LDKLLKMVDFPLPESMVDMYVGHLLDDMRSKLERQGKSMESLGKKPEELRAEVRPEAEQV 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
T I L K +EV E+E+ + Q R + D++ K N + LR +
Sbjct: 352 TRTQIFLLRAARKEGVEVNEQEIDGQIQQIAMRSGQDYNALKDYYIKN-NLIFSLRDRML 410
Query: 418 EDKVIDHILKSVQIVDRK 435
DK +D I + + + +
Sbjct: 411 ADKAMDAIYEKAAVTEVE 428
>gi|223938075|ref|ZP_03629973.1| trigger factor [bacterium Ellin514]
gi|223893289|gb|EEF59752.1| trigger factor [bacterium Ellin514]
Length = 443
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 90/442 (20%), Positives = 185/442 (41%), Gaps = 18/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + K+ + V + S + +F+ I+D + +A + GFRPGK P + Y K
Sbjct: 1 MNVTVENLAPCKKLVRVEVESPEVDKAFDSMIKDFQRQAALPGFRPGKAPRDMVVKRYEK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E ++I + + + ++ P DI L+ + +
Sbjct: 61 DIQDEVKRKLIPDAYRKAIEEQKLEVVGAP---------DIEEIQFSRGQALQFAATIET 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ + + ++ +V + +++R + + + F E ++ GD V+YT +
Sbjct: 112 APEFELPEYKGIPAKRETTQVTDADVERAINMLRERQTNFNTVERAAQAGDVAVVNYTGT 171
Query: 181 VDNVILED--------QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
D L + +K + + L+G K GD++ + FP D
Sbjct: 172 TDGKPLTEVAPTAKGLTEQKGFWINIDKNSFIPGFADQLIGAKAGDKRTVNVDFPADFVT 231
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQK 292
LA KK + EV + V++ A G ES +R + ++ + +
Sbjct: 232 PQLANKKGVYEVEVVEVKEKILPAVDDAFAKTYGAESLEKLREGVRKDLENELTYKKTRS 291
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHM 352
V+ Q+++ + + +F++PES V NE ++ + E + ++ ++ +
Sbjct: 292 VRNQLVEELLKRVSFELPESSVNNETRNVVYNIVQENQQRGIPKEVIEQQKDQIYSAAND 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
AK RV + I EK I+V++EE+ ++Q + +K + Q+ + E+
Sbjct: 352 SAKTRVKAAFIFQKIAEKEGIKVSQEEVAQRVHQMASTYQVPVEKFVKDLQQRNGIV-EI 410
Query: 413 RAPIFEDKVIDHILKSVQIVDR 434
I +KV+D + ++ +I D
Sbjct: 411 YDQIANEKVLDFVQQNAKIEDV 432
>gi|326330786|ref|ZP_08197087.1| trigger factor [Nocardioidaceae bacterium Broad-1]
gi|325951316|gb|EGD43355.1| trigger factor [Nocardioidaceae bacterium Broad-1]
Length = 464
Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats.
Identities = 78/478 (16%), Positives = 200/478 (41%), Gaps = 22/478 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P L S + + I + N+ GFR GKVP I G+
Sbjct: 1 MKSAVETLSPTRAKLTVEVPFEELKPSLDAAYKQIAQQINVPGFRRGKVPPQVIDKQVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++LSE ++ ++ + + L + +P I + + +E L+ D
Sbjct: 61 GAVLSEAVNNVLPQKYFDALQENSLEPLAQPEIEVTK---------LEDNEALEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + ++ ++ + E+ + +++ Q+ + + + E + GD V +D
Sbjct: 112 VKPEITLPDYEGIEAKVEDIELTDADVEEQIQAMRERFGTLKDVERPAADGDFVVIDLKA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D ++ + + VG + E + GL G+ K+ + +L G++
Sbjct: 172 TKDGEDVDGAEAVGMSYQVGKGGMLDGLDEAITGLSAGESKDFKSTLV----GGELIGQE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V +N ++ +V ++D A F++ + ++ + +L
Sbjct: 228 VDVNVTVNQVQEQELPAYDDDFAQLASEFDTVKELEEDVRGRLGNGKRLEQAAAARDAVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + K +PE++V E N Q + ++ A + + ++ + +RRV
Sbjct: 288 EALLEKVEVPLPETIVTEELNARRQGIEQQLGFAGLTFDKYLEDEGQTIEEFEADLERRV 347
Query: 359 L----TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++L I ++ I V ++E+ + ++ + ++ ++H ++ N + EL
Sbjct: 348 RDAVAAQLILDQIAKEKEIGVEQQELTEHMMRRAQQSGQDPQEFVNHMLEH-NHVPELVQ 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS--PEKLLDKSSKVETFQSEEAPS 470
I K + ++++ ++ D +L + + + ++ +++ + ++E+A +
Sbjct: 407 EILRGKALAQLVEAAKVTDESGNHVELKNLRPDGTIGEDEPEAEATDEVSEETEKADA 464
>gi|120602779|ref|YP_967179.1| trigger factor [Desulfovibrio vulgaris DP4]
gi|166229042|sp|A1VE86|TIG_DESVV RecName: Full=Trigger factor; Short=TF
gi|120563008|gb|ABM28752.1| trigger factor [Desulfovibrio vulgaris DP4]
Length = 433
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 98/435 (22%), Positives = 189/435 (43%), Gaps = 13/435 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +K++++V +P + + I R+ N+ GFR GKVP S +++ + K
Sbjct: 1 MEYKVEDVSPVKKKVNVTVPVEEVDAALGAAIAMYRTSVNLDGFRKGKVPASIVENRFRK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I +E +++ + EI++ + R D G +E + +S+++
Sbjct: 61 EIYAEATQDLVNVHINEIVTSLEVSPLSR---------IDFDGGELERGKEFSYTISFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
+PQ ++ ++ V Q+ VDEKE+D +A I +N + GD V +D+
Sbjct: 112 MPQFDLPDYEGFAVEQEKAVVDEKEVDEVIARIRRNMAELVPVAETRPGADGDVVVLDFA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ +E S +N Q +G + ++ + G + E FP+D D AGK
Sbjct: 172 AFENGEPIEGVSAENFQLSLGEKQSLEDFENLVKTIPAGQEAEGPITFPDDFLNPDFAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + + V +++ LA GFES MR Q E L + ++ +
Sbjct: 232 TVTMKVKVHAVKERRLPEIDDALAQKAGGFESMEKMRETVVTSYMQSREQLHKATAQKSM 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + F +PES+V+ +++ +R +M + +++ E+ + A++
Sbjct: 292 LDKLLKMVDFALPESMVDMYVGNLIEDMRVKMERQGRGLESLGKTPEQLREQVLPEAQQI 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ I L G K +EV+E+E+ L Q R + D++ + + LR +
Sbjct: 352 ARSQIFLLAAGRKEAVEVSEQEVDGQLQQLAMRSGQDFDTLKDYYVRN-GLIFNLRDRLI 410
Query: 418 EDKVIDHILKSVQIV 432
DK +D I +
Sbjct: 411 ADKAMDAIYAKANVT 425
>gi|302528953|ref|ZP_07281295.1| trigger factor [Streptomyces sp. AA4]
gi|302437848|gb|EFL09664.1| trigger factor [Streptomyces sp. AA4]
Length = 460
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 88/474 (18%), Positives = 189/474 (39%), Gaps = 23/474 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +++V +P + L +F+ I + + GFRPGKVP ++S G+
Sbjct: 1 MKSTVEQLSPTRVKINVEVPFDELKPNFDAAYRKIAQQVRVPGFRPGKVPARVLESRIGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ +L E ++E I E + + R +P + + +E L+ D
Sbjct: 61 APVLDEVVNEAIPAKYIEAVRAGEVRTLGQPEFEVTK---------LEDREVLEFSAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ L+++ D E ++E+ Q+ E+ E ++ GD V++D +
Sbjct: 112 VRPEIELPDLAGLEISVDDVETTDEEVAEQLDELRARFGTLTGVERPAQTGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD +E+ S + + +GS L E +VG G+ K + AG+
Sbjct: 172 TVDGKAVEEASTTGLSYEIGSGQLVDGIDEAIVGATAGETKVFTTKLVAG----EFAGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V +++ A F++ +R ++ + + + + ++L
Sbjct: 228 AEVTVTVQSVKERELPEADDEFAQLASEFDTIDELREDLRTRLGRVKKMQQGVQARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLA 354
+ + + +PE +VE E ++ + EE +
Sbjct: 288 EILLERTEVPLPEKVVEAEIENRKHDAVHPFDHDEEQFAKALEAEGRTLEEFNAEVKEES 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V T ++L TI +K V + E+ + Q RF + + Q+ L + A
Sbjct: 348 EKAVRTQLLLDTIADKEKTSVNDGELTERIIYQAQRFGVSPDEYVQRAQQS-GQLTAIYA 406
Query: 415 PIFEDKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ K + +++ + D +V +LF E+ E+ T
Sbjct: 407 DVRRGKALASVVRGTTVKDASGAEVDLSELFGADEEAPAEETQVTEEAAATPAE 460
>gi|303229344|ref|ZP_07316134.1| trigger factor [Veillonella atypica ACS-134-V-Col7a]
gi|303231384|ref|ZP_07318118.1| trigger factor [Veillonella atypica ACS-049-V-Sch6]
gi|302513980|gb|EFL55988.1| trigger factor [Veillonella atypica ACS-049-V-Sch6]
gi|302515880|gb|EFL57832.1| trigger factor [Veillonella atypica ACS-134-V-Col7a]
Length = 434
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 83/438 (18%), Positives = 169/438 (38%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + L + +P+ + + ++ I ++ NI GFR G P ++ +GK
Sbjct: 1 MKATVNPVDQHVVTLTIEVPAAEVDKGIKQAVKRIANQVNIPGFRKGHAPRRVLEMNFGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E D + + L + D P + E DL +++
Sbjct: 61 EAILEEAFDVLASQNYSAALRENDIVPVSDPETERVQ---------FEEGKDLIFKVTVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P++++ + L+ T+ V +++I+ Q+ I + + + D +D+
Sbjct: 112 KRPEVKLGDYKGLEATKQDATVTDEQIEEQLNNIREQQAKMVVAEEGATIQKDDFAVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
SVD + K+ +GS + L+G K GD ++ FPED+ + +LAG
Sbjct: 172 AGSVDGKPFDGGEGKSYPLQIGSGSFIPGFEDQLIGAKAGDDVTVKVTFPEDYFVAELAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ I ++ +N++ A +E+ ++ K+++ +
Sbjct: 232 KEAEFKTHIHDIKRKELPELNDEFAKEASSYETIEELKNDLRAKMEEEASRRAIDTYNAD 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
++ T D+PE ++ + ++Q++ M K + E+ Y
Sbjct: 292 LIQAAVKNATVDIPEVMINDRVEQMIQELAMNMEGRGLKLDDYLKFSNKTIEDLRTEYKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A V +VL I IEVT ++M ++ F K++ D K +A L
Sbjct: 352 SAAENVRADLVLDAIATAEGIEVTPDDMNREIFIMAQNFGADPKEVWDIIAK-EGRVAML 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ K I+ + +
Sbjct: 411 AGSVARKKAARFIIDNAK 428
>gi|46579745|ref|YP_010553.1| trigger factor [Desulfovibrio vulgaris str. Hildenborough]
gi|67461805|sp|Q72CE9|TIG_DESVH RecName: Full=Trigger factor; Short=TF
gi|46449160|gb|AAS95812.1| trigger factor [Desulfovibrio vulgaris str. Hildenborough]
gi|311233535|gb|ADP86389.1| trigger factor [Desulfovibrio vulgaris RCH1]
Length = 433
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 98/435 (22%), Positives = 188/435 (43%), Gaps = 13/435 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +K++++V +P + + I R+ N+ GFR GKVP S +++ + K
Sbjct: 1 MEYKVEDVSPVKKKVNVTVPVEEVDAALGAAIAMYRTSVNLDGFRKGKVPASIVENRFRK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I +E +++ + EI++ R D G +E + +S+++
Sbjct: 61 EIYAEATQDLVNVHINEIVTSLAVSPLSR---------IDFDGGELERGKEFSYTISFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
+PQ ++ ++ V Q+ VDEKE+D +A I +N + GD V +D+
Sbjct: 112 MPQFDLPDYEGFAVEQEKAVVDEKEVDEVIARIRRNMAELVPVAETRPGADGDVVVLDFA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ +E S +N Q +G + ++ + G + E FP+D D AGK
Sbjct: 172 AFENGEPIEGVSAENFQLSLGEKQSLEDFENLVKTIPAGQEAEGPITFPDDFLNPDFAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + + V +++ LA GFES MR Q E L + ++ +
Sbjct: 232 TVTMKVKVHAVKERRLPEIDDALAQKAGGFESMEKMRETVVTSYMQSREQLHKATAQKSM 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + F +PES+V+ +++ +R +M + +++ E+ + A++
Sbjct: 292 LDKLLKMVDFALPESMVDMYVGNLIEDMRVKMERQGRGLESLGKTPEQLREQVLPEAQQI 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ I L G K +EV+E+E+ L Q R + D++ + + LR +
Sbjct: 352 ARSQIFLLAAGRKEAVEVSEQEVDGQLQQLAMRSGQDFDTLKDYYVRN-GLIFNLRDRLI 410
Query: 418 EDKVIDHILKSVQIV 432
DK +D I +
Sbjct: 411 ADKAMDAIYAKANVT 425
>gi|28198385|ref|NP_778699.1| trigger factor [Xylella fastidiosa Temecula1]
gi|182681027|ref|YP_001829187.1| trigger factor [Xylella fastidiosa M23]
gi|32130193|sp|Q87E52|TIG_XYLFT RecName: Full=Trigger factor; Short=TF
gi|238691091|sp|B2I8K2|TIG_XYLF2 RecName: Full=Trigger factor; Short=TF
gi|28056455|gb|AAO28348.1| peptidyl-prolyl cis-trans isomerase [Xylella fastidiosa Temecula1]
gi|182631137|gb|ACB91913.1| trigger factor [Xylella fastidiosa M23]
gi|307579495|gb|ADN63464.1| trigger factor [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 431
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 92/447 (20%), Positives = 197/447 (44%), Gaps = 19/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V+ + L+R L +P +RL +ER+ +I A I GFR GKVP I+ +G+
Sbjct: 1 MPVLIESIGNLERRLTFSVPEDRLESHVDERLREIARAARINGFRAGKVPAKVIEQRFGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E +D +++E + + R A I L ++++
Sbjct: 61 KVRAEVLDSLLRETLDSAIRAHSLRLAGAARID------------HANEGGLNFVATFEV 108
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P L V + +V + +ID+ + + + V E +++G V ++
Sbjct: 109 VPDFGEIDVSKLGVVRRTAKVTDVDIDQMIENLRLQRRTWRVAEHGAQVGYLVALETWSQ 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + + I+GS +F + L GL GD+ ++ FP+D + LAGK V
Sbjct: 169 AGDERLPIEGVEAGSTILGSGVMFEQIERGLEGLSKGDENVLDVTFPDDWRVMQLAGKAV 228
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESE--SAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ + EV P+ + VN + G +S R +++ + + ++R+I
Sbjct: 229 QVHVKVIEVSEPVLLEVNEEFIKSFGVKSGKLEDFRADIRANLERELKGALVSHLRREIG 288
Query: 299 DY-ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I+ ++P LVE E +L K ++ + + + I ++ + A +R
Sbjct: 289 EQLIAAYAHVEMPPRLVEKEARLMLAKQIEQIRLSGR---DPTVIPDDAHIGFMDAACKR 345
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
VL G+++G I +N + + + L+ + +++ ++ P + +++ +
Sbjct: 346 VLVGLLVGEIAGRNRLRLDPMRVTETLHLIASTY-EEPEEVFQMYRNDPKLMEGVQSLVM 404
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDN 444
E++VI+ I Q ++ ++F +
Sbjct: 405 EEQVIEWIADRAQKTEQVLSFQEAIQQ 431
>gi|21221077|ref|NP_626856.1| trigger factor [Streptomyces coelicolor A3(2)]
gi|256787752|ref|ZP_05526183.1| trigger factor [Streptomyces lividans TK24]
gi|289771639|ref|ZP_06531017.1| trigger factor tig [Streptomyces lividans TK24]
gi|23822236|sp|Q9F314|TIG_STRCO RecName: Full=Trigger factor; Short=TF
gi|10280520|emb|CAC09996.1| putative cell division trigger factor [Streptomyces coelicolor
A3(2)]
gi|289701838|gb|EFD69267.1| trigger factor tig [Streptomyces lividans TK24]
Length = 468
Score = 207 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 88/480 (18%), Positives = 193/480 (40%), Gaps = 21/480 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + + +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTDAVNEAELNPLGQPEVDITE---------LKDGETLNFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P IEI + ++V D EV ++++++ + ++ + + E + GD +T+D
Sbjct: 112 IRPSIEIPDYSGIEVEVDAVEVTDEDVEKSVEQLRERFASTSPVERAAADGDVLTLDLQA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD ILED V + +GS +L E + GL+ G E F + AGK+
Sbjct: 172 KVDGEILEDGVADGVSYTIGSGELLDGIDEAVKGLEAG----GEATFTSELKGGSAAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +++D A F++ ++ +++ ++ + + ++L
Sbjct: 228 AEVTVKVSQVAARELPELDDDFAQLASEFDTLEELQADSRKRLANMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
D + VPE L+E+E N + + + EE
Sbjct: 288 DKLLELVEVPVPEKLLEDEINTRKHNLEHHQLGQMGLDLEKYLELQGKTAEEFETETREA 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + ++ + V++EE+ L ++ + + + L
Sbjct: 348 AVKGIKTQFVLDELVKQEKLNVSQEELTEHLMRRAASSGMSPDQFAQAVVE-QGQVPLLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
+ K + +++ + D L D E + D + + ++++ E +
Sbjct: 407 GEVARGKALAAVVEKATVKDTNGEIVDLDDEEDEETEAAEADATEAADAEKADDKAEEKT 466
>gi|220912908|ref|YP_002488217.1| trigger factor [Arthrobacter chlorophenolicus A6]
gi|254788982|sp|B8HA36|TIG_ARTCA RecName: Full=Trigger factor; Short=TF
gi|219859786|gb|ACL40128.1| trigger factor [Arthrobacter chlorophenolicus A6]
Length = 464
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 80/476 (16%), Positives = 176/476 (36%), Gaps = 25/476 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L+V +P L S + + + S+ + GFR GKVP I G+
Sbjct: 1 MKSAVENLTPTRVKLNVEVPFEELKPSIDSAYKTVASQIQVPGFRKGKVPAKLIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L I++ + + + R RP + I E LK D
Sbjct: 61 GYVLETAINDGLNGWYQAAVQESGIRPLSRPEVEITE-----VPDPSATDGGLKFAAEVD 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ + ++V E + ++D+ + E+ + + + GD +T+D T
Sbjct: 116 VRPEIELPDYAGIKVEVAAAESSDADVDKALDELRGRFGTLKSVDRPAADGDFLTIDITA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D ++ S + + VG+ + E + GL + + D AG+
Sbjct: 176 TIDGEEVD--SAAGLSYQVGAGTMLEGMDEAVTGLSADEDAIFDTTLV----GGDHAGEA 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++K V N+D A F++ + +R +++ + + + ++L
Sbjct: 230 AQVKVAVKAVKERELPEANDDFAQLASEFDTLAELREDLAKQAAESKVVEQGVEARDKVL 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + VP+S+VE + + + + EE + R
Sbjct: 290 DKLVELVEVPVPDSVVEEQLEAHFK--------EGNGHGDGEHDTEEHREEVRANTARAF 341
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L I EK ++V++ E+ + ++ + + + + + +
Sbjct: 342 QNEIILDAIAEKEEVDVSQNELIDYIVTTASQYGMDPNQFAQIIDQS-GQVPMMVSEVRR 400
Query: 419 DKVIDHILKSVQIVDRK---VTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + +L + D + V E + ++ E P+E
Sbjct: 401 RKALAVVLGQATVTDSEGNAVDLSDFVRPGGEEEAPAAEVTEADTAEGEATEVPAE 456
>gi|108763895|ref|YP_630242.1| trigger factor [Myxococcus xanthus DK 1622]
gi|118574077|sp|Q1DAT1|TIG_MYXXD RecName: Full=Trigger factor; Short=TF
gi|108467775|gb|ABF92960.1| trigger factor [Myxococcus xanthus DK 1622]
Length = 425
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 72/433 (16%), Positives = 188/433 (43%), Gaps = 13/433 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + ++++L + + + R+ + + ++ + + GFR GKVP ++ +
Sbjct: 1 MKVQVEELSPIEKKLSIEVDNARVAEELSRAYSNLGRQVRLPGFRQGKVPRRILEQRFRD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E I +++ E + + + P +T + ++ ++
Sbjct: 61 QVEDEVIQRVVQSAYVEAIREHNVEVVATPQVT---------NSGLKPNTPFTFEARVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE--IGDKVTVDYT 178
P++E + +L +T+ V +++++ Q+ + ++ E GD VTVD+
Sbjct: 112 KPKVEAKDYVELPLTKSDTAVTDEQVNEQLERMRQSMARLEPVTDRDTAASGDYVTVDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD + + V +L L G+K G+ K+I+ FP+++ ++++ GK
Sbjct: 172 ATVDGQPFAGSKAEGITVQVQPGELVESKIAALEGVKVGESKDIDYAFPQEYRVEEVRGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGF-ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
R + ++K V + +N+D A + G +S +R + +++ + V + + +
Sbjct: 232 TARFHITLKGVQKEIVPELNDDFAKQSGVAQSIDELRTKLREDMEKARKSQVEGEEREAL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + + TFDVP ++VE + +L+ ++ + + ++ + A +
Sbjct: 292 MKALLERNTFDVPRAMVERAMDSMLRGALQQLQRSGVDPRQLNLDFNRLREDMREKALQE 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V ++ +I +K I+ ++ ++ + + Q ++ + K + L +
Sbjct: 352 VKGTLLFESIAQKEGIQASDADVDARIEQLANEAG-QPVAVVQKYFKGADERLGLSLRLR 410
Query: 418 EDKVIDHILKSVQ 430
E+K I+ + +
Sbjct: 411 EEKTIEFLRSRAK 423
>gi|258511813|ref|YP_003185247.1| trigger factor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478539|gb|ACV58858.1| trigger factor [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 435
Score = 206 bits (524), Expect = 5e-51, Method: Composition-based stats.
Identities = 84/439 (19%), Positives = 199/439 (45%), Gaps = 16/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + + L+V + S R + +E + + + I GFR GKVP + +G
Sbjct: 1 MAAKWEKTGANVGVLEVEVDSERFAQALDEAFKRVVKRVVIPGFRKGKVPRKLFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ++ ++ + E + + +P++ + + +E + +
Sbjct: 61 ESLYEDAVNILLPQAYQEAVMETGIEPVDQPAVDVVQ---------VESGKPFIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+ P++++ + ++V + EV ++++++++ + +++ E E E GD VT+D+
Sbjct: 112 VKPEVQLGEYKGVEVEDKVFEVTDQDVEQEIQNVLRSHAQIETVEDGAVEKGDVVTIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD E + + +GS L + + L+G+K G++++IE FPED+ +K L GK
Sbjct: 172 GTVDGEPFEGGEAEGFRLEIGSGALVAGFEDQLIGMKPGEERDIEVTFPEDYHVKSLRGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
R + + E+ P+ +N++ F++ +K+++ ++ + ++ ++
Sbjct: 232 VARFHVKLHEIRRPVLRELNDEFVQEISEFQTVDEYVADLRKKLEERAKLEHERYIENEV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
+ + + T ++P ++E E + + ++ EE Y L
Sbjct: 292 VRKAAERATIEIPPVMIEREIDHQVGHFAQQLQMQQIPLDAYLEFTGLTMEELRDQYREL 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ V T +VL I + +EVTEE+++ + + + ++ LA LR
Sbjct: 352 AEQNVRTSLVLEAIADAEKVEVTEEDVEQEIARMAEQTGLEADRVRQLLSFRDPELASLR 411
Query: 414 APIFEDKVIDHILKSVQIV 432
A + K + ++ +IV
Sbjct: 412 ADLKTRKTVRLLVDHAKIV 430
>gi|42525092|ref|NP_970472.1| trigger factor [Bdellovibrio bacteriovorus HD100]
gi|67461779|sp|Q6MH01|TIG_BDEBA RecName: Full=Trigger factor; Short=TF
gi|39577303|emb|CAE81126.1| trigger factor [Bdellovibrio bacteriovorus HD100]
Length = 437
Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats.
Identities = 85/438 (19%), Positives = 198/438 (45%), Gaps = 13/438 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + L R+L++ +P+ + +F + I+ + IKGFR GK PL+ +KSLYG
Sbjct: 1 MKSNVEKVSNLSRKLNIEVPAAAVQTAFQKIFNGIQKEVTIKGFRKGKAPLATVKSLYGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + ++I++ E L++ P + D ++D+
Sbjct: 61 RVKQDVVQDLIQKHYAEALNEHKLEPISYPEFEFADPT---------ENKDFSFSAAFDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
P+I + ++ L+V ++ E D K+ID+ + I + FE ++ ++GD +++
Sbjct: 112 RPEITLKKYEGLEVEKEKAEFDPKKIDQVLENIRASRATFEVVAEDRAVKMGDIAVINFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ LE+ S + +G+ + +VG+K G+ K + FP+ + +LAGK
Sbjct: 172 GFMGGAPLENGSGTDHHLELGAKQFIEGFEDGIVGMKKGETKTLSLKFPDPYHSAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDL-AVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V ++ ++ + + + N+ A G ++ + ++Q + K ++
Sbjct: 232 PVEFKVTLNQIKAKVLPELTNEFLATLGGPSDLETLKKSIQEDLEQTETKRIEDAFKNRL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
L + + +VP SL++ + +++ + MS + S E+ + A
Sbjct: 292 LKTLVKENPVEVPPSLMKEQKASLVEDFKKRMSEQGMGPDDFASYVEKWDGDFEKTAAEM 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + ++ I +K+++ +E++ + + + E ++ + + + P + L +
Sbjct: 352 IQSSFLVDAIAKKHDLFCKKEDLDAKFAEYAQQTGIEESRIKEFYGR-PEQASRLTYMLT 410
Query: 418 EDKVIDHILKSVQIVDRK 435
E+KVI + KSV++ +
Sbjct: 411 EEKVIAFLNKSVKVKEVP 428
>gi|253575670|ref|ZP_04853006.1| trigger factor tig [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845008|gb|EES73020.1| trigger factor tig [Paenibacillus sp. oral taxon 786 str. D14]
Length = 473
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 87/482 (18%), Positives = 200/482 (41%), Gaps = 21/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + E L+V + + R+ + ++ + + K N+ GFR GKVP ++ +G
Sbjct: 1 MKATWEKIEKNLGVLEVEVEAERVAAALDKAFQKVVKKVNVPGFRKGKVPRPIFEARFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ID ++ E+ E + + D RP + I + K +
Sbjct: 61 ESLYQDAIDILLPEVYTEAVDQTDIFPVDRPEVDIEQ---------FAKGQPFKFKARIT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + ++V EV ++E++ ++ + + + + + ++ GD V +D+
Sbjct: 112 VKPEVKLGDYKGVEVPAINVEVSDEELNNELERLQQRHAELVVIDDEPAKNGDTVVIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + +GS + +VGL TGD K++ FPE + ++LAGK
Sbjct: 172 GSVDGVPFEGGKAERYSLELGSNTFIPGFEDQVVGLATGDFKDVTVTFPETYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + E+ ++++ A F++ + +++ E + + I
Sbjct: 232 EAVFKVKVHEIKRKQLPELDDEFAKDVSEFDTLDEFKEDLKKQLAARKEQEAKAAREGAI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
+D + ++PE++++ E +++ + + ++
Sbjct: 292 VDKVGENAEVEIPEAMIKGEVENMIRDFDNRLRAQGMNLDMFLGFSGQTVDDLRGQMQGD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV +VL I + IEVT++E+ L + +++ + +L L
Sbjct: 352 AEKRVRNNLVLEAIAKAEKIEVTQDEINKELNDMAEAYKRTPEEIRNILAAN-GSLGSLN 410
Query: 414 APIFEDKVIDHILKSVQIVD----RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
I K I +L++ + V + + + + + + ++EEA
Sbjct: 411 EEILIRKTIQFLLENSKEVPAEQAEAKSKEAKPAAKKSTKKSTKAEAKADADKTEAEEAQ 470
Query: 470 SE 471
E
Sbjct: 471 GE 472
>gi|302869361|ref|YP_003837998.1| trigger factor [Micromonospora aurantiaca ATCC 27029]
gi|315504164|ref|YP_004083051.1| trigger factor [Micromonospora sp. L5]
gi|302572220|gb|ADL48422.1| trigger factor [Micromonospora aurantiaca ATCC 27029]
gi|315410783|gb|ADU08900.1| trigger factor [Micromonospora sp. L5]
Length = 448
Score = 206 bits (523), Expect = 6e-51, Method: Composition-based stats.
Identities = 87/457 (19%), Positives = 180/457 (39%), Gaps = 23/457 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L + +P L S + +I + + GFR GKVP + I G+
Sbjct: 1 MKSTVETLSPTRVRLAIEVPFVELEPSLKKAYREIGQQVQVPGFRRGKVPSAVIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L+E I E I + + + + D + RP + I E L D
Sbjct: 61 GTVLNEAIQEAIPQNILAAVREHDLKTLGRPEVDITE---------FNDGDSLNFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + ++VT D ++ + EID Q+ + + + E ++ GD V +D
Sbjct: 112 VRPEITLPDPATIEVTVDEIQIADSEIDEQINSLRERFATLKTVERAAQEGDFVQIDLNA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + S N+ VGS L E LVGL GD D AG+
Sbjct: 172 TVDGEEVPGGSASNISHEVGSKQLLPGLDEALVGLAAGDSTTFTTQLV----GGDYAGRD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V +N+D A + F++ +R +++ + + + + L
Sbjct: 228 ADVAVTVRTVKEKELPELNDDFAQMASEFDTIDELRADLRERVTRGKQVEQIYAARDKAL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----A 354
+ + PE +V+ E + ++ + + +E+ + A
Sbjct: 288 EQMVAAAEVPAPEGVVKEEVESRKAAMVDQLERIGASLEEYLAAEEKTEEQIDTELTEAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
V ++L T+ + +++V+++E + + R ++ D + A A +
Sbjct: 348 TDGVKIQLLLDTLADAEDVQVSDDEFGHEIVHRAQRAGMAPQQYYDQLVRS-GAAAAVFG 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSES 448
+ K + +++ ++I D +V+ D L +
Sbjct: 407 DVRRGKALAAVMEKIKIKDSAGNEVSLDALRAQNEAE 443
>gi|331001369|ref|ZP_08324993.1| trigger factor [Parasutterella excrementihominis YIT 11859]
gi|329568628|gb|EGG50430.1| trigger factor [Parasutterella excrementihominis YIT 11859]
Length = 461
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 98/448 (21%), Positives = 200/448 (44%), Gaps = 13/448 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ E L+R +++ I L + + + KA GFRPG P + +++ YG+
Sbjct: 26 KAEEVKPNPLQRTIELTISRKELDARVAKALREKAKKAKFHGFRPGHAPAAMVRAAYGQE 85
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I + I+ ++ E + + + P I E G E + ++++
Sbjct: 86 IQFDAINALVSAAFVEKVQEGKYHVSGYPDIAPTE-------GAPENEDTMSFTATFEVF 138
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P +E+ D VT+ CE+ + ++++ + + K FE + + GD+V VD+ ++
Sbjct: 139 PDVEVPDMKDASVTEYECELTDADVEKTLDVMRKQRATFEKADKTAADGDRVIVDFKGTL 198
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V E + K+ F +G + E + G+K G+ K FPE++ K+LAGK+V+
Sbjct: 199 DGVAFEGGTAKDYAFALGQGRMLPEFENAIRGMKAGETKTFNLTFPENYPAKNLAGKEVQ 258
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFES-ESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++KEV + +++ A LG ++ + +++ + + K+ ++
Sbjct: 259 FEVTLKEVDEEILPALDDKFAKDLGVNDGIDKLKADVKENLQREVTARLEARTKQSAMNA 318
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + F VP + VE + ++ M + N D A++RV
Sbjct: 319 LLSVAKFPVPHAAVEEQREALVHDAIENMKAQGINLPN----DSIPANAMLDQAEQRVRL 374
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+ + I EK I T+E++++ + K+++D + P AEL A + E+
Sbjct: 375 GLQISAIVEKEKITSTDEQIKALADNIAKSY-EDPKEVVDWYLNNPQHKAELAAVVVENN 433
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSES 448
V+ ILK+ Q+ ++F+ L ++
Sbjct: 434 VVAWILKNAQVKKEPISFENLMGRGQQA 461
>gi|226311380|ref|YP_002771274.1| trigger factor [Brevibacillus brevis NBRC 100599]
gi|254788990|sp|C0ZAG1|TIG_BREBN RecName: Full=Trigger factor; Short=TF
gi|226094328|dbj|BAH42770.1| trigger factor [Brevibacillus brevis NBRC 100599]
Length = 430
Score = 206 bits (523), Expect = 7e-51, Method: Composition-based stats.
Identities = 80/439 (18%), Positives = 185/439 (42%), Gaps = 17/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + E + L + + + ++ + ++ + + K + GFR GKVP +S +G
Sbjct: 1 MAANWEKVENNQGVLTIEVDATQVDAALDQAFKKVVQKVQVPGFRKGKVPRKMFESRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D ++ + + + RP + + + E +L + +
Sbjct: 61 ESLYQDALDILLPTAYGQAVREAGIEPVDRPEVDVTQM---------EQGKNLIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+ P++++ + L + + V E+ +D ++ + + + E ++ GD +D+
Sbjct: 112 VKPEVKLGDYKGLSIEEKDFSVTEESVDAELKRMQERHAELVAVEEGAAQTGDIAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E ++ +GS + E L GL G++KEI FPE++ +LAGK
Sbjct: 172 GFQDGVAFEGGKAEDYSLELGSGTFIAGFEEQLAGLNIGEEKEITVTFPEEYHSPNLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + + V++++ A F++ ++ +K+++ + Q V+ Q+
Sbjct: 232 EAVFKVKLNSLKRKNMPVLDDEFAKDVSEFDTLEELKADTKKKLEEKTAQEKDQYVREQL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHML 353
+ + D+P +VE+E + ++ + + Q + +
Sbjct: 292 VLKAAENAEIDLPAVMVEHELDQMVNEFGQRLQYQGMTLELYYQFSGMDESQLRDQLRAD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A RV T + L IG+ NIE TEE++ + L + G + ++ + +A L
Sbjct: 352 ATSRVRTSLTLEAIGKAENIEATEEDVNAELDKLAGVYGRPADELRK-IFSAQDGMAALY 410
Query: 414 APIFEDKVIDHILKSVQIV 432
+ K +D ++ ++
Sbjct: 411 RDVQTRKTVDLLVAESKVT 429
>gi|303257393|ref|ZP_07343406.1| trigger factor [Burkholderiales bacterium 1_1_47]
gi|302859750|gb|EFL82828.1| trigger factor [Burkholderiales bacterium 1_1_47]
Length = 461
Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats.
Identities = 98/448 (21%), Positives = 200/448 (44%), Gaps = 13/448 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ E L+R +++ I L + + + KA GFRPG P + +++ YG+
Sbjct: 26 KAEEVKPNPLQRTIELTISRKELDARVAKALREKAKKAKFHGFRPGHAPAAMVRAAYGQE 85
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I + I+ ++ E + + + P I E G E + ++++
Sbjct: 86 IQFDAINTLVSAAFVEKVQEGKYHVSGYPDIAPTE-------GAPENEDTMSFTATFEVF 138
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P +E+ D VT+ CE+ + ++++ + + K FE + + GD+V VD+ ++
Sbjct: 139 PDVEVPDMKDASVTEYECELTDADVEKTLDVMRKQRATFEKADKTAADGDRVIVDFKGTL 198
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V E + K+ F +G + E + G+K G+ K FPE++ K+LAGK+V+
Sbjct: 199 DGVAFEGGTAKDYAFALGQGRMLPEFENAIRGMKAGETKTFNLTFPENYPAKNLAGKEVQ 258
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFES-ESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++KEV + +++ A LG ++ + +++ + + K+ ++
Sbjct: 259 FEVTLKEVDEEILPALDDKFAKDLGVNDGIDKLKADVKENLQREVTARLEARTKQSAMNA 318
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + F VP + VE + ++ M + N D A++RV
Sbjct: 319 LLSVAKFPVPHAAVEEQREALVHDAIENMKAQGINLPN----DSIPANAMLDQAEQRVRL 374
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G+ + I EK I T+E++++ + K+++D + P AEL A + E+
Sbjct: 375 GLQISAIVEKEKITSTDEQIKALADNIAKSY-EDPKEVVDWYLNNPQHKAELAAVVVENN 433
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSES 448
V+ ILK+ Q+ ++F+ L ++
Sbjct: 434 VVAWILKNAQVKKEPISFENLMGRGQQA 461
>gi|238018906|ref|ZP_04599332.1| hypothetical protein VEIDISOL_00766 [Veillonella dispar ATCC 17748]
gi|237864390|gb|EEP65680.1| hypothetical protein VEIDISOL_00766 [Veillonella dispar ATCC 17748]
Length = 434
Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats.
Identities = 83/438 (18%), Positives = 169/438 (38%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + L + +P+ + + ++ I + NI GFR G P ++ +GK
Sbjct: 1 MKATVNPVDQHVVTLTIEVPAAEVDKGIKQAVKRIAGQVNIPGFRKGHAPRRVLEMNFGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+IL E + + + L + D P I + E DL + +
Sbjct: 61 DAILEEAFEVLASQNYSAALRENDIVPVTDPEIEREQ---------FEEGKDLIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P++++ + L+ + V +++I+ Q+ I + + + D +D+
Sbjct: 112 KRPEVKLGDYKGLEAEKQDATVTDEQIEEQLNNIREQQAKMVVAEEGATIQKDDFAVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
SVD + K+ +GS + L+G K GD ++ FPED+ + +LAG
Sbjct: 172 AGSVDGKPFDGGEGKSYPLQIGSGSFIPGFEDQLIGAKAGDDVTVKVTFPEDYFVAELAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ I ++ +N++ A +E+ ++ K+++ +
Sbjct: 232 KEAEFKTHIHDIKRKELPELNDEFAKEASSYETIEELKKDLRAKMEEEASRRAIDTYNAD 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
++ T D+PE ++E+ ++Q++ M K + E+ Y
Sbjct: 292 LIQTAVKNATVDIPEVMIEDRVEQMIQELAMNMEGRGLKLDDYLKFSNKTIEDLRSEYKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A V +VL I IEVT ++M ++ F K++ D K +A L
Sbjct: 352 SAAENVRADLVLDAIATAEGIEVTPDDMNREIFIMAQNFGADPKEVWDIIAK-EGRVAML 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ K I+ + +
Sbjct: 411 AGSVARKKAARFIIDNAK 428
>gi|121534157|ref|ZP_01665982.1| trigger factor [Thermosinus carboxydivorans Nor1]
gi|121307260|gb|EAX48177.1| trigger factor [Thermosinus carboxydivorans Nor1]
Length = 429
Score = 206 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 86/436 (19%), Positives = 183/436 (41%), Gaps = 17/436 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + + K L++ +P + +F + + + ++ NI GFR GK P ++ GK
Sbjct: 1 MKVTAERIDNHKLVLEMEVPQEEVAKAFQKAYQKLAARVNIPGFRKGKAPRKILELHVGK 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E D + + + L ++ RP I I E L+ + +
Sbjct: 61 EVLKDEAFDLLANKAYWQALDEQKAEPVTRPEIEILT---------FEEGKPLRFKATVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYT 178
P++ + + L+V + EV +++ +Q+ + + V E + + GD +D+
Sbjct: 112 TKPEVTLGEYKGLKVAKPAAEVTVEDVHKQLENLRNRHAKMVVVEDAALQKGDFAIIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + K VGS E L+G K G+++E+ FPE++ + +LAGK
Sbjct: 172 GFIDGKPFKGGDAKGYPLEVGSGSFIPGFEEQLLGAKAGEEREVNVVFPENYFVPELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I ++ +++D A F++ ++ K+K+ + ++ + Q
Sbjct: 232 ASTFKVKIHDIKRKELPELDDDFAKDVSEFDTLEELKADIENKLKEAAAERAEREFRNQA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHML 353
+ + T D+PE ++E + ++ + + + K + + D Q Y
Sbjct: 292 IKLAVDNATVDIPEVMIEQRIDDMVSDLDINLQNRGMKLDDYLKATKMDLAGLRQNYREA 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A V T +VL I + IEV++E++Q+ + + +++ ++ + L
Sbjct: 352 AAYSVKTDLVLEAIAKAEGIEVSDEDVQAEVVAMARSYGASVEEVAKIIRE-QGRVGALY 410
Query: 414 APIFEDKVIDHILKSV 429
+ K I+ S
Sbjct: 411 ETVKRKKAAKLIIDSA 426
>gi|294629347|ref|ZP_06707907.1| trigger factor tig [Streptomyces sp. e14]
gi|292832680|gb|EFF91029.1| trigger factor tig [Streptomyces sp. e14]
Length = 462
Score = 206 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 86/448 (19%), Positives = 184/448 (41%), Gaps = 21/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEAELNPLGQPEVDITE---------LKDGETLNFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P IEI + ++V D EV ++++++ + ++ + + E +E GD VT+D
Sbjct: 112 VRPTIEIPDYSGIEVEVDAVEVTDEDVEKAVEQLRERFASTTPVERAAEDGDVVTIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED V + +GS +L + + GL+ G E F + AGK+
Sbjct: 172 KVDGEVLEDGIANGVSYTIGSGELLDGIDDAVKGLEAG----GEATFTSELKGGSAAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +++D A F++ +R ++++ ++ + + ++L
Sbjct: 228 AEVTVKVTQVAARELPELDDDFAQLASEFDTLEELRADSRKRLENMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
+ + VPE L+E+E N + ++ + EE
Sbjct: 288 EKLLELVEVPVPEKLLEDEINTRKHNLEHHQLGQMGLTLDKYLEIQGKTAEEFDTETREA 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + K + V +EE+ L ++ + + N + L
Sbjct: 348 AVKGIKTQFVLDELVNKEKLGVNQEELTEHLMRRAASSGMSPDQFAQAVVQ-QNQVPLLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ K + ++++ + D L
Sbjct: 407 GEVARGKALAVVVEAATVKDTNGEIVDL 434
>gi|302551411|ref|ZP_07303753.1| trigger factor [Streptomyces viridochromogenes DSM 40736]
gi|302469029|gb|EFL32122.1| trigger factor [Streptomyces viridochromogenes DSM 40736]
Length = 464
Score = 206 bits (522), Expect = 8e-51, Method: Composition-based stats.
Identities = 92/477 (19%), Positives = 191/477 (40%), Gaps = 21/477 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GKVP I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKVPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + + +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTDAVNEAELNVLGQPEVDITE---------LKDGETLNFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P IEI F ++V D EV ++++ + + E+ + + E +E GD VT+D
Sbjct: 112 IRPSIEIPDFSGIEVEVDAVEVTDEDVAKAVEELRERFASTSPVERAAEDGDVVTIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED V + +GS +L + + GL+ G E F + AGK+
Sbjct: 172 KVDGEVLEDGVADGVSYTIGSGELLDGIDDAVKGLEAG----GEATFTSELKGGSAAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + ++++ A F++ +R ++++ ++ + + ++L
Sbjct: 228 AEVTVKVTQVAARELPELDDEFAQLASEFDTIEELRADSRKRLENMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-----QKSQNVDSIDEEDLQYYHML 353
+ + VPE L+E+E N + + + +EE
Sbjct: 288 EKLLELVEVPVPEKLLEDEVNTRKHNLEHHQLGQMGLDLAKYLEIQGKSEEEFEAETREA 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + ++ + V +EE+ L ++ + + + L
Sbjct: 348 AVKGIKTQFVLDELVKQEKLNVNQEELTEHLMRRAASSGMSPDQFAQAVVE-GGQVPLLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ K + +++ + D L D E+ + S T +EE
Sbjct: 407 GEVARGKALAVVVEKATVKDTNGEVVDLDDEDEETEAPEAEATDSAEATESAEEKTE 463
>gi|15827779|ref|NP_302042.1| trigger factor [Mycobacterium leprae TN]
gi|221230256|ref|YP_002503672.1| trigger factor [Mycobacterium leprae Br4923]
gi|21264082|sp|Q9CBY2|TIG_MYCLE RecName: Full=Trigger factor; Short=TF
gi|254789013|sp|B8ZRP5|TIG_MYCLB RecName: Full=Trigger factor; Short=TF
gi|13093331|emb|CAC30431.1| possible molecular chaperone [Mycobacterium leprae]
gi|219933363|emb|CAR71575.1| possible molecular chaperone [Mycobacterium leprae Br4923]
Length = 469
Score = 206 bits (522), Expect = 9e-51, Method: Composition-based stats.
Identities = 76/480 (15%), Positives = 190/480 (39%), Gaps = 23/480 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F +++ + GFRPGKVP +++ +G+
Sbjct: 1 MKSSVEQLNPTRVRINVEVPFTELEPDFQRAYKELARHVQLPGFRPGKVPARLLEARFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + ++E + + L++ + + +P I + E DL + +
Sbjct: 61 ETLLDQVVNEAMPSRYGQALAESEVQPIGQPEIEV---------IRKEYGQDLAFTVEVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + F L+V D EV +++ ++ + + +GD V++D +
Sbjct: 112 VRPKIALPDFSTLKVVVDPVEVSTDDVEAELRSLRARFGTLIGVDRPVALGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+++ + + + + VG L + + LVGL G+ + + AG+
Sbjct: 172 TINGEKVPNADAEGLSHEVGYGRLIAGLDDALVGLSAGESRVFT----TQLATSKHAGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V +++ A F++ + +R ++++ +K++ +
Sbjct: 228 AEVIVTVKSVKERELPEPDDEFAQLVSEFDTMAELRANLGDQVRKAKYAQQAEKIRDAAV 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLA 354
D + + +PE +V+ ++N L + K V S EE A
Sbjct: 288 DALLERVDVPLPEGIVQAQFNNALHDALSGLGHDEAKFAEVLAERGSSREEFEAEARSAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+R V ++L + + I+V ++++ L ++ +++ ++ N L+ L
Sbjct: 348 ERDVTRQLLLDVVADDQKIQVGQDDLNERLLATSQQYGVDAQQLFGFLREN-NRLSSLVT 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ ++++ D + + F ++S + + + +E E
Sbjct: 407 DARRRLAVAAVVEAATFTDSDGNTIDTSEFFGKHAQSDKADQKTEEADPNSDAIDEEVDE 466
>gi|284044101|ref|YP_003394441.1| trigger factor [Conexibacter woesei DSM 14684]
gi|283948322|gb|ADB51066.1| trigger factor [Conexibacter woesei DSM 14684]
Length = 488
Score = 206 bits (522), Expect = 9e-51, Method: Composition-based stats.
Identities = 86/435 (19%), Positives = 177/435 (40%), Gaps = 15/435 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + ++ +P+ + S + + + GFR GKVP + G+
Sbjct: 6 KTNVTELPESRVRVEAEVPAAEVEKSLTRAAKQLARDMRVPGFRKGKVPPQVVIRRVGRD 65
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E + I E + P + + + L + +
Sbjct: 66 YVLDEAVRGSIGGWYAEAVDTARIHPVGEPRLDLGDLPP--------QGEPLSFTIEIGV 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P + + L+V + EVD++ ++ ++ + ++ E E E+ GD V VDY S
Sbjct: 118 RPTATLGDYTGLEVERREAEVDDERVEHELGHLREHLSRLETVEREAAEGDFVVVDYVGS 177
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++ +G L E L G K G+ + I+ FP+D+ LAG+
Sbjct: 178 IDGEPFEGGEGRDQLIELGGGRLIPGFEEQLTGAKAGEDRTIQVRFPDDYGAGHLAGRDA 237
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ S+KEV + + +N++LA GF++ ++ ++I + + + + +LD
Sbjct: 238 QFEISVKEVRARVLPELNDELASDAAGFDTLDELKDDIRRRISEQDGQTIENEYREAVLD 297
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAK 355
T DVP++L+E + + ++ Q + +EE L+ A+
Sbjct: 298 AAVANATVDVPDALIEARAAELWDQTSRQLQQRGLSKQAYMQMSGRSEEEILEEAKPDAE 357
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + VL + E +IE +E+++ +AL K+L +K N + LR
Sbjct: 358 QALKREAVLAAVVEAESIEPSEDDLAAALEHTASHENTTGAKLLARVKKTGN-VEALRED 416
Query: 416 IFEDKVIDHILKSVQ 430
+ + +D +++
Sbjct: 417 VATTQALDLLVERAN 431
>gi|311743058|ref|ZP_07716866.1| trigger factor [Aeromicrobium marinum DSM 15272]
gi|311313738|gb|EFQ83647.1| trigger factor [Aeromicrobium marinum DSM 15272]
Length = 456
Score = 206 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 78/470 (16%), Positives = 194/470 (41%), Gaps = 21/470 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L + +P T S + + I ++ + GFR GKVP + + G+
Sbjct: 1 MKSTTENLSPTRVKLTIEVPFEEFTPSLEQAYKTIGAQIQVPGFRKGKVPAAIVDQRIGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E I+ + +++ + +P I + + D+++ +D
Sbjct: 61 GAVLDEAINSALPGWYSAAVAETKLQPLSQPEIDL---------AKFDDGQDIEVVAEFD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT- 178
+ P IE+ ++V+ V + ++D Q+ + + F V E + GD +T+D +
Sbjct: 112 VRPAIELPDISTIEVSVSDATVGDDDVDEQIEALRQRFATFTVVERAAAEGDALTIDLSA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D +E + + + + +G+ + E + GL G+ F +L G+
Sbjct: 172 AEKDGTAIEAATAEGMPYTIGAGTMLDGLDEAVTGLSAGET----ATFGTTLVGGELKGQ 227
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+V + ++ EV ++ + + F++ MR ++K+ + + + +
Sbjct: 228 EVDVTVTVTEVKQTELPDLDEEFVQMASEFDTVDEMRADLTEKVTRGKRMEQAAEARDLV 287
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
L+ I + +PE +V E G Q++ +++ A + + + + + +R
Sbjct: 288 LEEIIGRVEAPLPEDIVSAELTGRRQQIEQQLAQAGLTFEGYLEDEGQTAEEFEAELERS 347
Query: 358 VL----TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
V +L + E N I + + E+ ++++ + + H ++ N + E+
Sbjct: 348 VRDSITAQFILDQVVEANEIGIDDNELSQHIFRRAQQSGQDPSSYIQHIMEH-NHVPEMV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETF 463
+ + K + +++ ++VD L + ++ S D++ T
Sbjct: 407 SEVLRGKALASLVEGAKVVDGSGNPVDLANLKADGSLGGPDDEAEAEPTA 456
>gi|223044103|ref|ZP_03614142.1| trigger factor [Staphylococcus capitis SK14]
gi|222442497|gb|EEE48603.1| trigger factor [Staphylococcus capitis SK14]
Length = 433
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 82/441 (18%), Positives = 190/441 (43%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKREGNEGVLTVTVPAEKVDKALDQAFKKVVKQINVPGFRKGKVPRQIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + +P +++ + IE D +
Sbjct: 61 EALYQDAVDILLPEAYGEAIDETGINPVAQPEVSVTQ---------IEKGKDFIFDATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ + E+ + + ++ E G+ V +D+T
Sbjct: 112 VEPEVKLGDYKGLEIEKQDIELTDDELQESIDHSLGHLAEMVVKEDGAVENGNTVNIDFT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + VGS E L G+KTG++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFEGGQAEGYDLEVGSGSFIPGFEEQLEGMKTGEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ +N+++A E+ + +++ + K +
Sbjct: 232 EATFKTKVNEIKYKDVPELNDEIANELDSNAETVDEYKENLRKRLSEQKATEAENTEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ + T D+PE++V E + ++Q+ + Q +++ +
Sbjct: 292 AINKATENTTIDIPEAMVNTELDRMIQEFGQRIQQQGLDLQTYYQISGQNEDQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I + N+EV++E++ L + +F + + +
Sbjct: 352 DAEQRVKTNLTLTAIADAENVEVSDEDIDKELEKMSEQFNISVEDIKSTL----GNTDIV 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKYVE 428
>gi|282850558|ref|ZP_06259937.1| trigger factor [Veillonella parvula ATCC 17745]
gi|282580051|gb|EFB85455.1| trigger factor [Veillonella parvula ATCC 17745]
Length = 434
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 82/438 (18%), Positives = 169/438 (38%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + L + +P+ + + ++ I + NI GFR G P ++ +GK
Sbjct: 1 MKATVNPVDQHVVTLTIEVPAAEVDKGIKQAVKRIAGQVNIPGFRKGHAPRRILEMNFGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E + + + L + D P I + E DL + +
Sbjct: 61 EAILEEAFEVLASQNYSAALRENDIVPVSEPEIEREQ---------FEEGKDLIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P++++ + L+V + V +++I+ Q+ I + + + D +D+
Sbjct: 112 KRPEVKLGDYKGLEVEKQDATVSDEQIEEQLNNIREQQAKMVVAEEGATIQKDDFAVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
SVD + K+ +GS + L+G K GD ++ FPED+ + +LAG
Sbjct: 172 AGSVDGKPFDGGEGKSYPLQIGSGSFIPGFEDQLIGAKAGDDVTVKVTFPEDYFVAELAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ I ++ +N++ A +E+ ++ K+++ +
Sbjct: 232 KEAEFKTHIHDIKRKELPELNDEFAKEASSYETIEELKKDLRTKMEEEASRRAIDTYNAD 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
++ T ++PE ++++ ++Q++ M K + E+ Y
Sbjct: 292 LIQTAVKNATVEIPEVMIKDRVEQMIQELAMNMEGRGLKLDDYLKFSNKTIEDLRSEYKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A V +VL I IEVT ++M ++ F K++ D K +A L
Sbjct: 352 SAAENVRADLVLDAIATAEGIEVTPDDMNREIFIMAQNFGADPKEVWDIIAK-EGRVAML 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ K I+ + +
Sbjct: 411 AGSVARKKAARFIIDNAK 428
>gi|95930404|ref|ZP_01313140.1| trigger factor [Desulfuromonas acetoxidans DSM 684]
gi|95133444|gb|EAT15107.1| trigger factor [Desulfuromonas acetoxidans DSM 684]
Length = 441
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 108/452 (23%), Positives = 213/452 (47%), Gaps = 12/452 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + +K+++ V I ++R+++ + + I A +KGFR GKVP+S ++S Y
Sbjct: 1 MNVQVENVSSVKKKISVEISADRVSEEIAKTYKKIAKSAKVKGFRDGKVPMSVVESYYVD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + +I E + L + A PSI S +E ++
Sbjct: 61 QMKQDVVGRLINETYYQALVDNEVAAISEPSIE--------ESSDLEKDKPFTYEAHVEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYTV 179
P++ + D+++ ++I + DEK +D ++ E+ + E + E++ GD VT+D+
Sbjct: 113 KPEVSAKDYTDIELKKEIFDFDEKIVDERLNEMLSSRSTMEVAERDEAQNGDFVTIDFEG 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD E + ++ + +GS E LVGLK G++KEI FPE++ KDLAGK+
Sbjct: 173 FVDGEAFEGGAAQDHELELGSGSFIPGFEEQLVGLKRGEEKEISVTFPEEYGNKDLAGKE 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++KE+ ++++ A G ES +R K+ + +K +++
Sbjct: 233 STFKIALKEIKVKQMPELDDEFAKGYGAESADDLREKIRDGYKKQETSRIDDDLKERLIT 292
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + +VPE+++E + + + + + + S + + +E Y A ++V
Sbjct: 293 VLVERNEVEVPEAMIERQLDFMHKNISNRLQSQGMTMEMMGMNEEAFRVMYRETAVKQVQ 352
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
++L IG + NI V ++E+ S L + ++ ++ A L A I E+
Sbjct: 353 GSLLLEAIGRQENISVDDDEVDSRLEEIAEMANAPLDEVKKYYSSD-EARKGLLAQIEEE 411
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
KVI ++L +I + VT + L + ++ E
Sbjct: 412 KVITYLLGQSKIEE--VTKEALAEKPADEEQE 441
>gi|302560649|ref|ZP_07312991.1| trigger factor tig [Streptomyces griseoflavus Tu4000]
gi|302478267|gb|EFL41360.1| trigger factor tig [Streptomyces griseoflavus Tu4000]
Length = 463
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 86/476 (18%), Positives = 193/476 (40%), Gaps = 21/476 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GKVP I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKVPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + + +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTDAVNEAELNPLGQPEVDITE---------LKDGETLNFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P IEI + ++V D EV ++++++ + ++ + + E +E GD VT+D
Sbjct: 112 IRPAIEIPDYSGIEVEVDAVEVTDEDVEKSVEQLRERFASTSPVERAAEDGDVVTIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED V + +GS +L + + G++ G E F + AGK+
Sbjct: 172 KVDGEVLEDGVASGVSYTIGSGELLDGIDDAVKGVEAG----GEATFTSELKGGSAAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + ++++ A F++ ++ ++++ ++ + + ++L
Sbjct: 228 AEVTVKVSQVAARELPELDDEFAQLASEFDTLEELKADSRKRLENMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-----QKSQNVDSIDEEDLQYYHML 353
+ + VPE L+E+E N + + + +EE
Sbjct: 288 EKLLELVEVPVPEKLLEDEINTRKHNLEHHQLGQMGLDLAKYLEIQGKTEEEFDTETREA 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + ++ + V++EE+ L ++ + + + L
Sbjct: 348 AVKGIKTQFVLDELVKQEKLNVSQEELTEHLMRRAASSGMSPDQFAQAVVE-QGQVPLLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+ K + +++ + D L D + + E ++ E E+
Sbjct: 407 GEVARGKALAVVVEKATVKDTNGEVVDLDDEEEDETTEDETTEAEATEAPAQEKTE 462
>gi|157829139|ref|YP_001495381.1| trigger factor [Rickettsia rickettsii str. 'Sheila Smith']
gi|165933867|ref|YP_001650656.1| trigger factor [Rickettsia rickettsii str. Iowa]
gi|166229929|sp|A8GTZ8|TIG_RICRS RecName: Full=Trigger factor; Short=TF
gi|189035950|sp|B0BVJ0|TIG_RICRO RecName: Full=Trigger factor; Short=TF
gi|157801620|gb|ABV76873.1| trigger factor [Rickettsia rickettsii str. 'Sheila Smith']
gi|165908954|gb|ABY73250.1| trigger factor, ppiase [Rickettsia rickettsii str. Iowa]
Length = 445
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 119/452 (26%), Positives = 215/452 (47%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +EGL + P + + D + + D+ K I GFR GKVP+S +K YG
Sbjct: 1 MGITVLKNEGLDFHARISTPLSEIDDDIQKELLDLTKKVKIPGFRAGKVPVSIVKKKYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ ++ I+ I V I+ + + RP I + ESD L+ + ++
Sbjct: 61 SVRNDIIERRINHSVNHIIKEHNLNIIGRPKIEELQNESD---------KALEFTVKIEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP+I I + + + EV+ K+++ Q+ ++A + + + + + GD+VT+D
Sbjct: 112 LPKITIPDLKKISLDRPKLEVNSKDVEEQLEKLAALTKNYTKESKAKIKDGDQVTIDAIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ ED + + I+GS L + L+G KTG + ++ FPE++ KDLAGK
Sbjct: 172 YIKEKTFEDGKLNDFKVIIGSNALIPGFEKQLIGSKTGSKVDVNVTFPENYHAKDLAGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
R IK V + P V++++ A + S +R +++I+ SE + +K + D
Sbjct: 232 ARFVVQIKAVHTAEPTVIDDEFAKKFQSNSLEELRTHFTKQIENESEEAINTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL+E E N + + +E YY+ LA RRV
Sbjct: 292 KLEKLLDFDVPESLLEQEKNILKSGTDKNEQDESLLKD---KSSKEITAYYNKLALRRVR 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++++ + QQ FPG E + D ++ P A+ L+ P ED
Sbjct: 349 IGLLLAEYAKSKNLQLEPDDLRKVIMQQARNFPGQENMIFDFYKNNPRAIEGLKGPALED 408
Query: 420 KVIDHILKS-VQIVDRKVTFDQLFDNSSESSP 450
K + +I +++ ++K T ++L
Sbjct: 409 KAVQYIFNHEIKLKEKKYTKEELEKYLEAEEQ 440
>gi|299535608|ref|ZP_07048929.1| trigger factor (TF) [Lysinibacillus fusiformis ZC1]
gi|298728808|gb|EFI69362.1| trigger factor (TF) [Lysinibacillus fusiformis ZC1]
Length = 429
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 84/441 (19%), Positives = 184/441 (41%), Gaps = 20/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + +P+ + + ++ + + + N+ GFR GK+P + +G
Sbjct: 1 MSAKWEKQEGNIGTLTIEVPAAEIDAAMDQAFKKVVKQINVPGFRKGKMPRKMFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ++ I+ E + + + P I E D
Sbjct: 61 ESLYQDALEIIVPESYAKAIDEAGIMPVDYPEIAGTE--------NFVHGQDFTFTAQVT 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P+ ++ + L+V++ EV ++E+D Q+ + E ++ GD +D+
Sbjct: 113 VKPEPKLGDYKGLEVSKLPVEVTDEEVDAQIQDQLARKAELEIKEDEAIVEGDTAVIDFE 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V E ++ +GS E LVG+K G+ K++ FPE++ +LAGK
Sbjct: 173 GFVGEEAFEGGKGEDYPLEIGSGSFIPGFEEQLVGVKAGESKDVVVTFPEEYHAAELAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++KEV + + +N++ A ES A+R ++ E ++ +
Sbjct: 233 EATFKVTVKEVKTKVLPELNDEFAKELDPEVESVEALRAKIKEQTAAQKETESDAALRDE 292
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
+++ + F+VP ++ +E + +LQ+ + + Q +E+
Sbjct: 293 LVEKAAENADFEVPAGMINSETDRMLQEFGQRLQTQGMNLDLYYQFSGQSEEDLRGQMKE 352
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ RV + L I E IE +E ++++ L + +F + ++ A L
Sbjct: 353 EAESRVRVSLTLEAIAEAEKIEASEADIEAELEKMAAQFNMTKDQITSAL----GGTAVL 408
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
I K ++ ++++ +I +
Sbjct: 409 ENDIKIQKTVEFLVENAKITE 429
>gi|284990112|ref|YP_003408666.1| trigger factor [Geodermatophilus obscurus DSM 43160]
gi|284063357|gb|ADB74295.1| trigger factor [Geodermatophilus obscurus DSM 43160]
Length = 491
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 85/448 (18%), Positives = 181/448 (40%), Gaps = 21/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + + +P L +F E +++ + + GFRPGKVP + G+
Sbjct: 1 MKSTIEELGPTRVRMAIEVPWGDLDHAFGEVYKELGKQVRVPGFRPGKVPNRVLDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + + I E+ E++ + R +P I + ++ L D
Sbjct: 61 PLVLEQVVQHAIPEVYSEVVRENQVRVLGQPDIEVT---------RLDDNDTLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ S D+L VT D EV ++EID Q++ + + + ++ GD V++D
Sbjct: 112 VAPKVELPSLDELAVTVDDVEVTDEEIDEQISVMRERFGMLTGVDRAAQDGDFVSIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + +LED S + + VGS +L + + GL + F AG+
Sbjct: 172 KLGDEVLEDGSTTGMSYEVGSGNLMEGLDDAVRGLSADE----STTFQTALLQGPNAGET 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V + ++++ A F++ +R ++ + + + +++
Sbjct: 228 ADVTVTVRSVKTKELPELDDEFASTASEFDTLEELREDVRTRLARTKVLQQGAQARDKLV 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI-----DEEDLQYYHML 353
+++ +PE+LVE E Q + E+ A + + E
Sbjct: 288 EHLLETVEVPIPENLVEREIEFRNQAMLNELQQAGMDWDSFLQMAGVESREAYDADQRKT 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
+ V T +L I + + V E++ + + Q R ++ Q+ +AE
Sbjct: 348 IEEAVRTQFILDAIADAREVTVDNEDLSAQIMAQAQRNRMSPEQYAQQLQQ-GGNIAEFV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQL 441
A + K + +L+ I D L
Sbjct: 407 ADVRRTKTLAQLLEQTTITDASGNVVDL 434
>gi|309812190|ref|ZP_07705948.1| trigger factor [Dermacoccus sp. Ellin185]
gi|308433877|gb|EFP57751.1| trigger factor [Dermacoccus sp. Ellin185]
Length = 495
Score = 205 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 91/473 (19%), Positives = 191/473 (40%), Gaps = 29/473 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V + ++ L S + I S+ I GFR GKVP I+ +G+
Sbjct: 1 MKSAVENLTPTRVKLTVDVTADELKPSIEKAYTTIGSQVQIPGFRKGKVPAKLIEQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ E ++E + E+ + + D + +P + I E +E L D
Sbjct: 61 AAVIQEAVNEALPELYTNAIVENDVKVLGQPEVDITEFP-------LEDGAGLSFTAEVD 113
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+I + +FD L+V + EV + +ID ++AE+ + E E +++ GD VT+D +
Sbjct: 114 IRPEITLPAFDTLEVEVEPIEVSDADIDERIAELRERFGTLESVERKAKKGDFVTIDLSA 173
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D ++ S V + +GS + E L GLK G++ + + G+
Sbjct: 174 TIDGNEIDAVSG--VSYEIGSGTMLDGLDEALTGLKAGEETTFT----SPLAGGEHEGEN 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ V ++++ A F++ ++ ++++ F + + ++L
Sbjct: 228 AQCTVKVESVKVRELPELDDEFAQLASSFDTIDELKADLRAEVERTKRFEQGVQARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + VPES+V E L+ D+E +++V
Sbjct: 288 EVLLEQLDIPVPESIVTEEVTNHLEGENR-------------LDDDEHRAEVTESTRQQV 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T ++L I EK+ I+V ++E+ L ++ + + +
Sbjct: 335 ATQLLLDEIVEKHEIQVGQDELIEYLIMSAQQYGMDPNTFAQAL-DAQGQVPAIMGEVAR 393
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + +L+S + D L E + + + SE
Sbjct: 394 RKALATVLESATVKDTAGNVVDLNAAVDTGEDEDEAQAADAADGENATPVASE 446
>gi|296129239|ref|YP_003636489.1| trigger factor [Cellulomonas flavigena DSM 20109]
gi|296021054|gb|ADG74290.1| trigger factor [Cellulomonas flavigena DSM 20109]
Length = 460
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 82/469 (17%), Positives = 184/469 (39%), Gaps = 29/469 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E K +L V + L S + + I + + GFR GKVP I G+
Sbjct: 1 MKSAVETLEPTKVKLSVEVTYAELKPSIDHAYQHIAEQVTVPGFRKGKVPPRIIDQRVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ ++E + + + + R +P + + + + +L +
Sbjct: 61 PAVIEHAVNEGLSSFYADAVRENSLRPMGQPEVEVTK----VPGLTAGDEGELHFTAEVE 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + D L VT D EV ++++D ++ + + + + + GD V +D T
Sbjct: 117 VRPEITLPELDGLSVTVDDVEVTDEDVDVRLDALRERFGSLVGVDRPAASGDFVVIDLTA 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D ++ S + Q GS ++ E LVGL TG++ E + + D G+K
Sbjct: 177 TIDGEQIDQVSGTSYQI--GSGNMLEGLDEALVGLSTGERTTFE----TELAGGDRKGEK 230
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + V V+++ A F++ ++ ++ + + + ++
Sbjct: 231 ALVSVTATGVKERQLPEVDDEFAQLASEFDTIDELKADLREQAARIKASNQAVQARDLLV 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++ + VP +VE E + L+ D+E A+ +
Sbjct: 291 EKLTTEVAIPVPAGVVEAEVHRHLES-------------EGRLEDDEHRAEVTEQAQTAL 337
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L T+ EK +I+V++ E+ L ++ + + + + A +
Sbjct: 338 RNQILLDTLAEKLDIKVSQSELLDYLVSASRQYGMDPNTFITTLDQ-QGQIPAMVAEVAR 396
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQ 464
K + L+ V +VD V + + E + +++
Sbjct: 397 SKALAVSLRKVAVVDGSGAAVDLSEFIGSDDEDEALEAAEQAPSDAATD 445
>gi|238898004|ref|YP_002923684.1| peptidyl-prolyl cis/trans isomerase (trigger factor), molecular
chaperone involved in cell division [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|259533617|sp|C4K4P3|TIG_HAMD5 RecName: Full=Trigger factor; Short=TF
gi|229465762|gb|ACQ67536.1| peptidyl-prolyl cis/trans isomerase (trigger factor), molecular
chaperone involved in cell division [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 440
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 91/454 (20%), Positives = 209/454 (46%), Gaps = 21/454 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV+ + +E LK+ + + S+ + + +++ A + GFR GKVP++ I+ YG+
Sbjct: 1 MQVLVETTEDLKKRATITLFSDDIEKAIKDKVVKTAKTAKMDGFRKGKVPINLIEQRYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + + + +++ + + + A RP G + + +++
Sbjct: 61 SIQQDILIDFMQDHFSKTILQEKLNLAGRPQ---------YLPGKYIKNENYTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
P+I++ + ++V + I +++ +ID+ + ++ + E+ + +E+GD+VT D+T
Sbjct: 112 YPEIKLKDLELIEVEKPIVSLNDDDIDKMLEKLRHQKKTWQEIPDLPAEMGDRVTFDFTG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
SVD E + + +G ++ E +VG K ++ I FP+++ + L GK+
Sbjct: 172 SVDGEKFEGGTASDFVMNLGEGNMIPGFEEGIVGHKMSEEFNITLTFPDEYHSESLKGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +K++ +N + S A+R + +++ +R+++K Q
Sbjct: 232 SQFLIHLKKIEKFQLPEINEEFIKNFDLPEESSIEALRAEIRKNMQRELTKAIRKRIKEQ 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ + + VP SL+E E + + K S D I E + A+
Sbjct: 292 TITSLCDLNKTKVPLSLIEEEIDALRTKAAS-------YSDKKDIIKELPRSVFAEKAES 344
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RVL G++L + ++N + V E ++Q L + + + K+ ++ ++ + +
Sbjct: 345 RVLVGLLLTEVIDRNKLTVDENKVQVFLEEIAEAY-ENPKETIEFYKNNKKLMNNIYNLA 403
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
E++ I +LK+ +I ++ ++F + E+
Sbjct: 404 LEEEAIQVLLKNAKITEKPISFSEFMKQIHETDT 437
>gi|294792183|ref|ZP_06757331.1| trigger factor [Veillonella sp. 6_1_27]
gi|294457413|gb|EFG25775.1| trigger factor [Veillonella sp. 6_1_27]
Length = 434
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 168/438 (38%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + L + +P+ + + ++ I + NI GFR G P ++ +GK
Sbjct: 1 MKATVNPVDQHVVTLTIEVPAAEVDKGIKQAVKRIAGQVNIPGFRKGHAPRRILEMNFGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E + + + L + D P I + E DL + +
Sbjct: 61 EAILEEAFEVLASQNYSAALRENDIVPVSEPEIEREQ---------FEEGKDLIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P++++ + L+ + V +++I+ Q+ I + + + D +D+
Sbjct: 112 KRPEVKLGDYKGLEADKQDATVSDEQIEEQLNNIREQQAKMVVAEEGATIQKDDFAVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
SVD + K+ +GS + L+G K GD ++ FPED+ + +LAG
Sbjct: 172 AGSVDGKPFDGGEGKSYPLQIGSGSFIPGFEDQLIGAKAGDDVTVKVTFPEDYFVAELAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ I ++ +N++ A +E+ ++ K+++ +
Sbjct: 232 KEAEFKTHIHDIKRKELPELNDEFAKEASSYETIEELKKDLRTKMEEEASRRAIDTYNAD 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
++ T ++PE ++++ ++Q++ M K + E+ Y
Sbjct: 292 LIQTAVKNATVEIPEVMIKDRVEQMIQELAMNMEGRGLKLDDYLKFSNKTIEDLRSEYKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A V +VL I IEVT ++M ++ F K++ D K +A L
Sbjct: 352 SAAENVRADLVLDAIATAEGIEVTPDDMNREIFIMAQNFGADPKEVWDIIAK-EGRVAML 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ K I+ + +
Sbjct: 411 AGSVARKKAARFIIDNAK 428
>gi|269798319|ref|YP_003312219.1| trigger factor [Veillonella parvula DSM 2008]
gi|269094948|gb|ACZ24939.1| trigger factor [Veillonella parvula DSM 2008]
Length = 434
Score = 205 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 82/438 (18%), Positives = 168/438 (38%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + L + +P+ + + ++ I + NI GFR G P ++ +GK
Sbjct: 1 MKATVNPVDQHVVTLTIEVPAAEVDKGIKQAVKRIAGQVNIPGFRKGHAPRRILEMNFGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E + + + L + D P I + E DL + +
Sbjct: 61 EAILEEAFEVLASQNYSTALRENDIVPVSEPEIEREQ---------FEEGKDLIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P++++ + L+ + V +++I+ Q+ I + + + D +D+
Sbjct: 112 KRPEVKLGDYKGLEADKQDATVSDEQIEEQLNNIREQQAKMVVAEEGATIQKDDFAVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
SVD + K+ +GS + L+G K GD ++ FPED+ + +LAG
Sbjct: 172 AGSVDGKPFDGGEGKSYPLQIGSGSFIPGFEDQLIGAKAGDDVTVKVTFPEDYFVAELAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ I ++ +N++ A +E+ ++ K+++ +
Sbjct: 232 KEAEFKTHIHDIKRKELPELNDEFAKEASSYETIEELKKDLRTKMEEEASRRAIDTYNAD 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
++ T ++PE ++E+ ++Q++ M K + E+ Y
Sbjct: 292 LIQTAVKNATVEIPEVMIEDRVEQMIQELAMNMEGRGLKLDDYLKFSNKTIEDLRSEYKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A V +VL I IEVT ++M ++ F K++ D K +A L
Sbjct: 352 SAAENVRADLVLDAIATAEGIEVTPDDMNREIFIMAQNFGADPKEVWDIIAK-EGRVAML 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ K I+ + +
Sbjct: 411 AGSVARKKAARFIIDNAK 428
>gi|308070426|ref|YP_003872031.1| Trigger factor (TF) [Paenibacillus polymyxa E681]
gi|305859705|gb|ADM71493.1| Trigger factor (TF) [Paenibacillus polymyxa E681]
Length = 437
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 88/447 (19%), Positives = 197/447 (44%), Gaps = 17/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + E L+V + ++R+ + ++ + + ++ GFR GKVP + YG
Sbjct: 1 MKATWEKIEKNLGVLEVEVDADRVAAALDKAFNKVAKQVSVPGFRKGKVPRPIFEKRYGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ID ++ E + + + D P + I++ K +
Sbjct: 61 ESLYQDAIDILLPEAYSQAVEQTDIFPVDSPDVEIDQ---------FAKGESFKFKAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++ + + ++V EV ++E+ +++ + + + V E ++ GD +D+
Sbjct: 112 VKPEVTLGDYKGVEVPVSKLEVSDEELAQELERLQQRHAELVVVDEDAAQSGDTAIIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + +GS E +VGL TGD K++E FPE++ DLAGK
Sbjct: 172 GSVDGVPFEGGQAEKYSLELGSNTFIPGFEEQVVGLHTGDSKDVEVTFPENYHSADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + E+ + ++++ A F++ + + +++ E + + +
Sbjct: 232 QAVFKVKVHELKRKVLPELDDEFAKDVSEFDTLAEFKEDLKKQLLDRKENEAKAAREGAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
++ ++ T D+PE++V++E +++ +SS + E+ +
Sbjct: 292 VEKVAENATIDIPEAMVKSEVQNMVRDFDNRLSSQGMNLEMFLGFSGQSKEDLEEQMKAD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV +VL + + NIEV+E E+ L + +++ + + A L+
Sbjct: 352 AEKRVRNNLVLEQVAKAENIEVSEAEIDEELKNMAEAYKRSVEEIRSILEGN-GSFANLK 410
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQ 440
I K I ++++ + V+ V +
Sbjct: 411 EEISLRKTIALLVENSKEVEAPVEAAE 437
>gi|70726251|ref|YP_253165.1| trigger factor [Staphylococcus haemolyticus JCSC1435]
gi|119370939|sp|Q4L716|TIG_STAHJ RecName: Full=Trigger factor; Short=TF
gi|68446975|dbj|BAE04559.1| prolyl isomerase [Staphylococcus haemolyticus JCSC1435]
Length = 434
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 191/441 (43%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLKVTVPAEKVDKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + +P I + + IE D + +
Sbjct: 61 EALYQDAVDILLPEAYGEAIDETGINPVAQPEINVTQ---------IEKGKDFEFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ ++++ + + ++ E GD V +D+
Sbjct: 112 VEPEVQLGDYKGLEIEKQDSELTDEDLQEAIDHSLGHLADMVVKEDGAVENGDTVNIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +GS + LVG+KTG++K++ FPE++ ++LAGK
Sbjct: 172 GYVDGEQFEGGQADGYDLEIGSGSFIPGFEDQLVGVKTGEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K + E+ +++++A L + S + +++ + K +
Sbjct: 232 KATFKTKVNEIKYKEVPELDDEIANELDSDANSVDEYKENLRKRLSEQKAEEAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ ++ T D+P+++++ E + ++Q+ + Q + + +
Sbjct: 292 AINKATDNATIDIPQAMIDTELDRMVQEFGQRIQQQGLDLQTYFQISGQDESQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++R+ T + L I +K NIE +E++ L + +F + + + +
Sbjct: 352 DAEQRIKTNLTLSAIADKENIEANDEDIDKELEKMSKQFNISVEDIKNTL----GNTDII 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKYVE 428
>gi|91206178|ref|YP_538533.1| trigger factor [Rickettsia bellii RML369-C]
gi|157826520|ref|YP_001495584.1| trigger factor [Rickettsia bellii OSU 85-389]
gi|119370930|sp|Q1RGS0|TIG_RICBR RecName: Full=Trigger factor; Short=TF
gi|166229927|sp|A8GUQ0|TIG_RICB8 RecName: Full=Trigger factor; Short=TF
gi|91069722|gb|ABE05444.1| Trigger factor [Rickettsia bellii RML369-C]
gi|157801824|gb|ABV78547.1| trigger factor [Rickettsia bellii OSU 85-389]
Length = 445
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 111/437 (25%), Positives = 215/437 (49%), Gaps = 14/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M +EGL + + P + + + + + D+ K I GFR GKVP++ ++ YG
Sbjct: 1 MATTILKNEGLDFHIKISTPLSEIDNDIQKELVDLTKKVKIAGFRAGKVPIAIVEKKYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ ++ I++ I + V ++ + + RP I + E L+ + ++
Sbjct: 61 SVRNDIIEKRINDSVNHVIKEHNLNIIGRPKIDDLQN---------EPNKPLEFTIKMEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP+I+I + + + EV +++ Q+ ++A+ ++ + + +++ GD++T+D
Sbjct: 112 LPKIDIPDLKKISINRPKLEVSPDDVEEQLKKLAEMMKSYTKESKAKAKDGDQITMDAVG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
V + E + + ++GS L + L+G K G + E+ FPE++ KDLAGK
Sbjct: 172 YVKDEAFEGGKLTDFKVVIGSNALIPGFEKQLIGSKAGSEVEVNVTFPENYHAKDLAGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
R +K V + P V++++ A + S +R ++KI+ SE + +K + D
Sbjct: 232 ARFVVQVKAVHTAEPTVIDDEFAKKFQSNSLEELRTHFTKKIENESEEAISTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL++ E N + + S S D E+ +YY LA RRV
Sbjct: 292 QLEKLLDFDVPESLLDQEKNILKSET---DKSEQDDSVFKDKSPEQVKEYYDKLALRRVR 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N++V ++++ + QQ FPG E + D ++ P A+ +L+ P E+
Sbjct: 349 IGLMLAEYAKDKNLQVEPDDLRRIIMQQARSFPGQENMLFDFYKNNPRAVEQLKGPALEE 408
Query: 420 KVIDHILKSV-QIVDRK 435
K + HI + + ++K
Sbjct: 409 KAVQHIFDNAVNLKEKK 425
>gi|294794048|ref|ZP_06759185.1| trigger factor [Veillonella sp. 3_1_44]
gi|294455618|gb|EFG23990.1| trigger factor [Veillonella sp. 3_1_44]
Length = 434
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 168/438 (38%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + L + +P+ + + ++ I + NI GFR G P ++ +GK
Sbjct: 1 MKATVNPVDQHVVTLTIEVPAAEVDKGIKQAVKRIAGQVNIPGFRKGHAPRRILEMNFGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E + + + L + D P I + E DL + +
Sbjct: 61 EAILEEAFEVLASQNYSAALRENDIVPVSEPEIEREQ---------FEEGKDLIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P++++ + L+ + V +++I+ Q+ I + + + D +D+
Sbjct: 112 KRPEVKLGDYKGLEAEKQDATVSDEQIEEQLNNIREQQAKMVVAEEGATIQKDDFAVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
SVD + K+ +GS + L+G K GD ++ FPED+ + +LAG
Sbjct: 172 AGSVDGKPFDGGEGKSYPLQIGSGSFIPGFEDQLIGAKAGDDVTVKVTFPEDYFVAELAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ I ++ +N++ A +E+ ++ K+++ +
Sbjct: 232 KEAEFKTHIHDIKRKELPELNDEFAKEASSYETIEELKKDLRTKMEEEASRRAIDTYNAD 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
++ T ++PE ++++ ++Q++ M K + E+ Y
Sbjct: 292 LIQTAVKNATVEIPEVMIKDRVEQMIQELAMNMEGRGLKLDDYLKFSNKTIEDLRSEYKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A V +VL I IEVT ++M ++ F K++ D K +A L
Sbjct: 352 SAAENVRADLVLDAIATAEGIEVTPDDMNREIFIMAQNFGADPKEVWDIIAK-EGRVAML 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ K I+ + +
Sbjct: 411 AGSVARKKAARFIIDNAK 428
>gi|119473464|ref|ZP_01614971.1| trigger factor [Alteromonadales bacterium TW-7]
gi|119444460|gb|EAW25793.1| trigger factor [Alteromonadales bacterium TW-7]
Length = 393
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/406 (19%), Positives = 185/406 (45%), Gaps = 18/406 (4%)
Query: 42 KGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDI 101
GFR GKVP+S I +G ++ E E+++ E + A PS
Sbjct: 1 DGFRAGKVPVSVINKRFGAAVRQEVAGEVMQRNYIEAIVAEKINPAGAPSFAPKS----- 55
Query: 102 TSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE 161
+E DL+ ++++ P++E+ D + V + V ++++ + + K + +
Sbjct: 56 ----LEAGKDLEFSATFEVYPEVEVQGLDKIAVEKPAVTVTDEDLANMLETLRKQHAEWA 111
Query: 162 VKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKE 221
+T + D+VTVD+ ++D + E + +G + + +VG K G++
Sbjct: 112 EVDTAAGESDRVTVDFVGTIDGEVFEGGKADDFPLELGQGRMIPGFEDNIVGKKAGEEVV 171
Query: 222 IERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQ 279
+ FPED+ ++L GK + ++K+V + ++ + A + G A++ +
Sbjct: 172 ADVTFPEDYHAENLKGKAAQFTITVKKVEAQELPELSEEFATKFGVTEGGVDALKEEVKK 231
Query: 280 KIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV 339
+ + + V+ VK Q + + +VP++LV+ E + + Q+ +
Sbjct: 232 NMTRELDQAVKANVKDQAIKGLLENNEIEVPKALVDQEVDALRQQAAQRFGG------DA 285
Query: 340 DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKML 399
++ E + +H A RV TG++LG + + N+I+V + ++++ + + +++
Sbjct: 286 KNMPELPAELFHEQAVTRVKTGLLLGEVIKANDIKVDDAKVEALIATVASAY-EDPTEVV 344
Query: 400 DHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
++++ + ++R E++ ++ IL + D + FD + +
Sbjct: 345 EYYKANDQLMQQMRNVAMEEQAVEAILAKANVSDVEKAFDDIMNPQ 390
>gi|304407480|ref|ZP_07389132.1| trigger factor [Paenibacillus curdlanolyticus YK9]
gi|304343431|gb|EFM09273.1| trigger factor [Paenibacillus curdlanolyticus YK9]
Length = 432
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 85/437 (19%), Positives = 186/437 (42%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + + L+V + + ++T++ ++ + + K N+ GFR GKVP +S +G
Sbjct: 1 MKATWEKIDTNLVSLNVEVGAEQVTEALDKAFKKVVQKVNVPGFRKGKVPRGIFESKFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ID I+ ++ +++ RP I + + K
Sbjct: 61 ESLYQDAIDIILPDVYAAAVTEAGILPVDRPEIDVEQ---------FAKGQTFKFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L+V V E+E++ ++ + + + + E E GD +D+
Sbjct: 112 VKPEVKLGDYKGLEVPSAEAVVTEEELNEELNRLQQRHAELNVIDEGTVESGDTAVIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + +GS + ++G+ TGD K++E FPE + + DLAGK
Sbjct: 172 GSVDGVAFEGGKSERYSLEIGSGSFIPGFEDQVIGMGTGDFKDVEVSFPESYHVADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ E+ ++++ A FE+ + + +K+ + +
Sbjct: 232 AAVFKVKLHEIKRKSLPALDDEFAKDVSEFETLAEYKQDLENNLKERKAKENEATRETAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHML 353
++ + ++P+++V E + +L+ + Q + +
Sbjct: 292 VEKAAEAAEIEIPQAMVNTETDYMLKDFENRLRMQGMNLELYFQFSGQNEAALREQMRGD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV +VL I + IEV+EE++ + L + ++ D F + N L L+
Sbjct: 352 AEKRVRNNLVLEAIAKAEGIEVSEEDVNAELETLSKAYNRPADELRDIFSRNGN-LENLK 410
Query: 414 APIFEDKVIDHILKSVQ 430
+ K I +L++ +
Sbjct: 411 EDVSLRKTIKFLLENSK 427
>gi|330469651|ref|YP_004407394.1| trigger factor [Verrucosispora maris AB-18-032]
gi|328812622|gb|AEB46794.1| trigger factor [Verrucosispora maris AB-18-032]
Length = 448
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 86/457 (18%), Positives = 181/457 (39%), Gaps = 23/457 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L + +P L S + +I + I GFR GKVP + I G+
Sbjct: 1 MKSTVETLSPTRVRLAIEVPFVELEPSLKKAYREIGQQIQIPGFRKGKVPPAIIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L+E + E I + + + + D + RP + I E L D
Sbjct: 61 GTVLNEAVQEAIPQNILAAVREHDLKTLGRPEVDITE---------FNDGDSLSFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + L+V D +VD+ EID Q+ + + + E + GD V +D
Sbjct: 112 VRPEITVPDLASLEVVVDELQVDDSEIDEQVKNLRERFATLKTVERAAAEGDYVQIDLRA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + S N+ VGS L E +VGL G+ + F D AG+
Sbjct: 172 TVDGEEVPGGSASNISHEVGSKQLLPGLDEAVVGLAAGE----DVTFTTQLVGGDFAGRD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V +N++ A F++ +R +++ + + + L
Sbjct: 228 AEVLVTVRTVKEKELPELNDEFAQLASEFDTIEELRNDLRERVTRGKRVEQIYAARDKAL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----A 354
+ + PE ++ +E Q + ++ ++ + +E+ + A
Sbjct: 288 EQLVEAAEVPAPEGVIRDEVESRKQAMVDQLERIGASMEDYLAAEEKTEEQIDAELTEAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V ++L T+ + +++V+++E + + R ++ D + A +
Sbjct: 348 TQGVKVQLLLDTLADAEDVQVSDDEFGHEIVHRAQRAGMAPQQYYDQLVRS-GAAGAVFG 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSES 448
+ K + +++ + I D +++ D L + S
Sbjct: 407 DVRRGKALASVMERITIKDTAGNEISLDALREASEAE 443
>gi|150011025|gb|ABR57169.1| trigger factor [Staphylococcus xylosus]
Length = 436
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 190/448 (42%), Gaps = 21/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGVLTVTVPAEKVDKAIDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + + +P I + IE ++ +
Sbjct: 61 EALYQDAVDILLPEAYGEAIDETGIKPVDQPEINVTS---------IEKGSEMTFEANVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ ++E+ + + ++ E GD V +D+
Sbjct: 112 VEPEVQLGDYKGLEIEKQNVELTDEELQESIDHQLGHLAEMVVKEDGAIENGDTVNIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +GS E LVG+KTG++K++ FPE++ ++LAGK
Sbjct: 172 GYVDGEQFEGGQAEGYDLEIGSGSFIPGFEERLVGVKTGEEKDVNVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ + +++A L E + + +++ + E K +
Sbjct: 232 EATFKTKVNEIKFKDVPELTDEIANELDAEANTVDEFKENLRKRLTEQKETDAENNQKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
+ SN T DVPE+++ E + ++Q+ M + + + +
Sbjct: 292 AISKASNNATIDVPEAMINTELDRMVQEFGQRMQQQGLNLETYFQISGQDESQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ RV T + L I + +EV+++++ L + G+F + + +
Sbjct: 352 DAEERVKTNLTLTAIADAEEVEVSDDDIDKELEKMSGQFNISVEDIKQTL----GNTDIV 407
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
+ + KVID ++ + V+ +
Sbjct: 408 KNDVRIQKVIDLLVDEAKFVEPSKDDSE 435
>gi|50954512|ref|YP_061800.1| trigger factor [Leifsonia xyli subsp. xyli str. CTCB07]
gi|67461740|sp|Q6AG00|TIG_LEIXX RecName: Full=Trigger factor; Short=TF
gi|50950994|gb|AAT88695.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Leifsonia xyli
subsp. xyli str. CTCB07]
Length = 466
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 83/468 (17%), Positives = 188/468 (40%), Gaps = 32/468 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L + + L S E I + NI GFR GKVP + I GK
Sbjct: 1 MKTTVEKLSPTRTKLTISVTPEELQPSIKHAYEHIAGQVNIPGFRKGKVPPAIIDQRVGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L ++E + + + + R RP I+E ++ + + DL L + D
Sbjct: 61 EAVLEHAVNEGLDGFYRLAVEENEVRPLGRPEADISEWPNEK-----DFSGDLLLTIEVD 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + +FD + +T + +V +++ ++ + + ++ GD +D
Sbjct: 116 VRPEITLPAFDGITLTVEAAQVTPDDVEEELDRLRSRFCTLVTVDRPAKKGDFAQIDLVA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ ++ + N+ + +GS +L E L L G+ E D G+
Sbjct: 176 EIGGEEVD--TAANISYEIGSGELIEGIDEALDTLTAGETTTFEAPL----MGGDHEGEN 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++ V ++D A F++ +R ++++ F + Q++
Sbjct: 230 AQITVTLNAVKERELPEADDDFAQISSEFDTIGELRESLRGQVERAKSFGQGTAARDQLV 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP LVE+E + L+ Q D+E +++
Sbjct: 290 EKLLELVEIPVPAQLVEDEVSRHLE-------------QESRLEDDEHRAEVTESSEKTF 336
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T I+L I ++ N++V+++E+ L Q ++ + + + ++ + I
Sbjct: 337 RTQILLDEIAQRENVKVSQDELTQYLVQGAAQYNMDPNEFVKILGEN-GQISSMVGEIAR 395
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETF 463
+K + +L ++VD ++V + + E + + ++ +T
Sbjct: 396 NKALAIVLGKAEVVDTNGKQVDLTEFVALPDD--GEAVDEDATPEDTD 441
>gi|290960369|ref|YP_003491551.1| cell division trigger factor [Streptomyces scabiei 87.22]
gi|260649895|emb|CBG73011.1| putative cell division trigger factor [Streptomyces scabiei 87.22]
Length = 466
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 88/480 (18%), Positives = 196/480 (40%), Gaps = 29/480 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L + +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLSIEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + + +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTDAVNEAELNVLGQPEVDITE---------LKDGETLNFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P IEI + ++V D EV E+++D+ + ++ + + E +E GD VT+D
Sbjct: 112 VRPAIEIPDYSGIEVEVDAVEVTEEDVDKAVEQLRERFASTSPVERAAEDGDVVTLDLQA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED + V + +GS +L + + GL+ G E F + AGK+
Sbjct: 172 KVDGEVLEDGVAEGVSYTIGSGELLDGIDDAVKGLEAG----GEATFASELKGGSAAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + ++++ A F++ +R ++++ ++ + + ++L
Sbjct: 228 AEVTVKVSQVAARELPALDDEFAQLASEFDTLEELRADSRKRLENMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
+ + VPE L+E+E N + + + EE
Sbjct: 288 EKLLEIVEVPVPEKLLEDEINTRKHNLEHHQLGQMGLDLEKYLEIQGKTVEEFDAETKEA 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + K + V +EE+ L ++ + + N + L
Sbjct: 348 AVKGIKTQFVLDELVSKEKLNVNQEELTEHLMRRAASSGMSPDQFAQAVVQN-NQVQLLV 406
Query: 414 APIFEDKVIDHILKSVQIVDR--------KVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ K + +++S + D + + S+E++ E ++ + ++
Sbjct: 407 GEVARGKALALVVESATVKDTNGEVVDLDDDEDETEAEGSAEATEETPAATEAEEKAPEA 466
>gi|313892915|ref|ZP_07826492.1| trigger factor [Veillonella sp. oral taxon 158 str. F0412]
gi|313442268|gb|EFR60683.1| trigger factor [Veillonella sp. oral taxon 158 str. F0412]
Length = 434
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 80/438 (18%), Positives = 168/438 (38%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + L + +P+ + + ++ I + NI GFR G P ++ +GK
Sbjct: 1 MKATVNPVDQHVVTLTIEVPAAEVDKGIKQAVKRIAGQVNIPGFRKGHAPRRILEMNFGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I+ E + + + L + D P I + E DL + +
Sbjct: 61 EAIMEEAFEVLASQNYTAALRENDIVPVSDPEIEREQ---------FEEGKDLIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P++++ + L+ + V +++I+ Q+ I + + + D +D+
Sbjct: 112 KRPEVKLGDYKGLEAEKQDATVTDEQIEEQLNNIREQQAKMVVAEEGATIQKDDFAVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
S+D + K+ +GS + L+G K GD ++ FPED+ + +LAG
Sbjct: 172 AGSIDGKPFDGGEGKSYPLQIGSGSFIPGFEDQLIGAKAGDDVTVKVTFPEDYFVAELAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ I ++ +N++ A +E+ ++ K+++ +
Sbjct: 232 KEAEFKTHIHDIKRKELPELNDEFAKEASSYETIEELKKDLRAKMEEEASRRAIDTYNAD 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
++ T ++PE ++E+ ++Q++ M K + E+ Y
Sbjct: 292 LIQTAVKNATVEIPEVMIEDRVEQMIQELAMNMEGRGLKLDDYLKFSNKTIEDLRSEYKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A V +VL I IEVT ++M ++ F K++ D K +A L
Sbjct: 352 SAAENVRADLVLDAIATAEGIEVTPDDMNREIFIMAQNFGADPKEVWDIIAK-EGRVAML 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ K I+ + +
Sbjct: 411 AGSVARKKAARFIIDNAK 428
>gi|297199672|ref|ZP_06917069.1| trigger factor [Streptomyces sviceus ATCC 29083]
gi|197713958|gb|EDY57992.1| trigger factor [Streptomyces sviceus ATCC 29083]
Length = 462
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 88/476 (18%), Positives = 193/476 (40%), Gaps = 22/476 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L + +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLSIEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEAEIDVLGQPEVDITE---------LKDGETLNFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P IEI + ++V D EV ++++D+ + E+ + + E +E GD VT+D
Sbjct: 112 VRPAIEIPDYSGIEVEVDAVEVSDEDVDKAVTELRERFASTSPVERAAEDGDVVTIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED V + +GS +L + + GL+ G E F + AGK+
Sbjct: 172 KVDGEVLEDGVASGVSYTIGSGELLDGIDDAVKGLEAG----GEATFASELKGGSAAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + ++++ A F++ +R ++++ ++ + + ++L
Sbjct: 228 AEVTVKVTQVAARELPELDDEFAQLASEFDTLDELRADSRKRLENMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
+ + VPE L+E+E N + + + EE
Sbjct: 288 EKLLELVEVPVPEKLLEDEINTRKHNLEHHQLGQMGLDLEKYLEIQGKTVEEFDTETKEA 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + ++ + V +EE+ L ++ + + + L
Sbjct: 348 AVKGIKTQFVLDELVKREKLNVNQEELTEHLMRRAASSGMSPDQFAQAVVE-GGQVPLLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+ K + ++++ + D L D+ + + E + S + E+
Sbjct: 407 GEVARGKALAVVVEAATVKDTNGEVIDL-DDDEDETAETVEAASEETPAEAEEKTE 461
>gi|196250176|ref|ZP_03148870.1| trigger factor [Geobacillus sp. G11MC16]
gi|196210360|gb|EDY05125.1| trigger factor [Geobacillus sp. G11MC16]
Length = 428
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 80/439 (18%), Positives = 183/439 (41%), Gaps = 21/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + ++ + + + ++ GFR GKVP + +G
Sbjct: 1 MSVKWEKLEGNEGVLTVEVDAEQVNKGLDAAFKKVVKNVSLPGFRKGKVPRVLFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E + + + P I I + E L +
Sbjct: 61 EALYQDALDILLPEAYAKAVEEAGIEPVSMPEIDIEQM---------EKGKSLIFKAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L+V + V +++++ ++ + +N VKE + D +D+
Sbjct: 112 VKPEVKLGQYKGLEVEKIDTTVTDEDVENELKRLQENYAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS + LVG+K G++KEI+ FPE++ + LAGK
Sbjct: 172 GFVDGEPFEGGKAENYSLEIGSGTFIPGFEDQLVGMKAGEEKEIQVTFPEEYHAEQLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++ A E+ ++ ++++ + V+
Sbjct: 232 PATFKVKVHEVKAKQLPALDDEFAKDVDEEVETLDELKSKIRTRLEEAKKNEAEAAVRNA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+++ + D+P +V+NE + +L++ + Q + +
Sbjct: 292 VVEKAAANAEIDIPAVMVQNETDRMLREFDQRLQMQGMNLQLYYQFSGQDEAALREQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I + NI+VT+EE+ L + + K+ + L +
Sbjct: 352 DAEKRVRAALTLEAIAKAENIDVTDEEVNEELEKMAASYNLSVDKLKELI----GNLDGV 407
Query: 413 RAPIFEDKVIDHILKSVQI 431
+ + K +D +++ +
Sbjct: 408 KEDLKWRKTVDFLVEHSTV 426
>gi|314933830|ref|ZP_07841195.1| trigger factor [Staphylococcus caprae C87]
gi|313653980|gb|EFS17737.1| trigger factor [Staphylococcus caprae C87]
Length = 433
Score = 204 bits (517), Expect = 3e-50, Method: Composition-based stats.
Identities = 82/441 (18%), Positives = 190/441 (43%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGVLTVTVPAEKVDKALDQAFKKVVKQINVPGFRKGKVPRQIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + +P +++ + IE D +
Sbjct: 61 EALYQDAVDILLPEAYGEAIDETGINPVAQPEVSVTQ---------IEKGKDFIFDATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ + E+ + + ++ E G+ V +D+T
Sbjct: 112 VEPEVKLGDYKGLEIEKQDTELTDDELQESIDHSLGHLAEMVVKEDGAVENGNTVNIDFT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + VGS E L G+KTG++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFEGGQAEGYDLEVGSGSFIPGFEEQLEGMKTGEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ +N+++A E+ + +++ + K +
Sbjct: 232 EANFKTKVNEIKYKDVPELNDEIANELDSNAETVDEYKENLRKRLSEQKATEAENTEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ + T D+PE++V E + ++Q+ + Q +++ +
Sbjct: 292 AINKATENTTIDIPEAMVNTELDRMIQEFGQRIQQQGLDLQTYYQISGQNEDQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I + N+EV++E++ L + +F + + +
Sbjct: 352 DAEQRVKTNLTLTAIADAENVEVSDEDIDKELEKMSEQFNISVEDIKSTL----GNTDIV 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKYVE 428
>gi|67459728|ref|YP_247352.1| trigger factor [Rickettsia felis URRWXCal2]
gi|75535881|sp|Q4UJV2|TIG_RICFE RecName: Full=Trigger factor; Short=TF
gi|67005261|gb|AAY62187.1| Trigger factor [Rickettsia felis URRWXCal2]
Length = 445
Score = 204 bits (517), Expect = 4e-50, Method: Composition-based stats.
Identities = 114/452 (25%), Positives = 216/452 (47%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +EGL + P + + D + + D+ K I GFR GKVP+S +K YG
Sbjct: 1 MGITVLKNEGLDFHARISTPLSEIDDDIQKELLDLTKKVKIAGFRAGKVPVSIVKKKYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ ++ I+ I V ++ + + RP I + E D L+ + ++
Sbjct: 61 SVRNDIIERRINHSVNHVIKEHNLNIIGRPKIEELQNEPD---------KALEFTVKIEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP+I I + + + EV+ K+++ Q+ ++A ++ + + + + G +VT+D
Sbjct: 112 LPKITIPDLKKISLDRPKLEVNSKDVEEQLEKLAALTKSYTKESKAKIKDGVQVTIDAIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + E + + ++GS L + L+G KTG + ++ FPE++ KDLAGK
Sbjct: 172 YIKDEAFEGGKLNDFKVVIGSNALIPGFEKQLIGSKTGSEVDVNVTFPENYHAKDLAGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
R IK V + P V++ + A + S +R +++I+ SE + +K + D
Sbjct: 232 ARFAVQIKSVHTAEPTVIDEEFAKKFQSNSLEELRTHFAKQIENESEEAINTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL+E E N + + + +E +YY+ LA RRV
Sbjct: 292 KLEKLLDFDVPESLLEQEKNILKSETDKNDQDESLLKD---KSPKEITEYYNKLALRRVR 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++++ + QQ FPG E + D ++ P A+ L+ P ED
Sbjct: 349 IGLLLAEYAKSKNLQLEPDDLRKVIMQQARNFPGQENMIFDFYKNNPRAIEGLKGPALED 408
Query: 420 KVIDHILKS-VQIVDRKVTFDQLFDNSSESSP 450
K + +I + +++ ++K T ++L
Sbjct: 409 KAVQYIFNNEIKLKEKKYTKEELEKYLEAEEQ 440
>gi|317123030|ref|YP_004103033.1| trigger factor [Thermaerobacter marianensis DSM 12885]
gi|315593010|gb|ADU52306.1| trigger factor [Thermaerobacter marianensis DSM 12885]
Length = 463
Score = 204 bits (517), Expect = 4e-50, Method: Composition-based stats.
Identities = 74/438 (16%), Positives = 175/438 (39%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E + L V + + + + + + I GFR G+ P ++ GK
Sbjct: 1 MKATVEKIENRRATLSVEVEPEAVARALDHAYRHLVHRVQIPGFRKGRAPRFLVERHLGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +D ++ E + +++ RP + I L+ +
Sbjct: 61 AALYEEALDHLLPEAYSQAVAETGIEPIDRPELKIET---------FSEEQGLRFTAEVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDY 177
+ P++++ + ++V V +++DR++ + E ++ +E G +D
Sbjct: 112 VKPEVDLGDYRSVRVEVPPVHVTAEDVDRELERWRELQATLEPAGEDAVAEKGMVAVLDL 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
++D + + + +GS L E LVG++ G++K++ FP+DH + L G
Sbjct: 172 AGTLDGEPIPNGQATDYMVELGSGRLLDGVEEQLVGMRPGEEKDVPVTFPDDHPDERLRG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K + +KE+ +++D A + S +R +++ + +E R +V++Q
Sbjct: 232 KTATFHIRLKELKRKQLPALDDDFARDVAGVASLQELRQQVEKELTRIAEERARAEVRQQ 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY----YHM 352
++ + +VPE+LV + ++ + + + + +
Sbjct: 292 VVQKVVEGARLEVPETLVRRQVEDRIRNLENRLRRQGDDLEGYLKATGQTREQLEASLRP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A V T +VL + + IE ++ E+++ L K+ F + + ++
Sbjct: 352 QAVEDVRTDLVLDAVAKAEGIEASDAEVEAELRTLAAAMGQPYAKVRQQFVRS-GLVLDV 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ K ID ++
Sbjct: 411 AETVRRRKTIDWLVARAT 428
>gi|84494303|ref|ZP_00993422.1| trigger factor [Janibacter sp. HTCC2649]
gi|84383796|gb|EAP99676.1| trigger factor [Janibacter sp. HTCC2649]
Length = 454
Score = 204 bits (517), Expect = 4e-50, Method: Composition-based stats.
Identities = 85/476 (17%), Positives = 188/476 (39%), Gaps = 32/476 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P + L + + I S+ I GFR GKVP I G+
Sbjct: 1 MKSAVETLSPTRVKLIVEVPFDELKSDLDAAYQTIGSQIQIPGFRKGKVPARIIDQRVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ E ++E + E + +A P + D+T+ +E DL+ + D
Sbjct: 61 GAVVQEAVNEALPRFFAEAVDNEGIKAIGSPDV-------DVTAVPLEDGQDLEFTVETD 113
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ D + V D + +++I+ ++ + + E E GD +++D
Sbjct: 114 VRPEIELPELDGIAVEVDEVKATDEDIEERLTSLRQRFGTLTAVERAVETGDVLSIDLKA 173
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S + V + VGS ++ + ++G GD K + D G+
Sbjct: 174 VIDGEDID--SVEGVTYEVGSGNMLEGLDDAVIGASAGDTKTFTAPL----AGGDNEGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ V +++D A F++ +R + +Q +F + + ++L
Sbjct: 228 ADCTVTVQSVKVRELPELDDDFAQLASQFDTLEELRADIVTQAEQAKKFEQGVQARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+++ VPE +VE E N L+ D+ ++ +
Sbjct: 288 EHLLEVTEVAVPEGIVEAEVNSHLEG-------------EGRLEDDTHRAEVDESTRKAL 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+L + EK IEV + E+ L ++ + + + + +
Sbjct: 335 KGQFLLDALAEKLEIEVEQPELIEYLIMSAQQYGMDPNQFAQAIDQ-QGQVPAMVQEVSR 393
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + +L+ + D + + ++L + PE + + + ++ E +E
Sbjct: 394 RKALAAVLEKAVVTDTAGKSIDLNELVPQAEVVEPELEDEADVEELSDEAVETETE 449
>gi|169829420|ref|YP_001699578.1| trigger factor (TF) [Lysinibacillus sphaericus C3-41]
gi|238688199|sp|B1HVE6|TIG_LYSSC RecName: Full=Trigger factor; Short=TF
gi|168993908|gb|ACA41448.1| Trigger factor (TF) [Lysinibacillus sphaericus C3-41]
Length = 429
Score = 204 bits (517), Expect = 4e-50, Method: Composition-based stats.
Identities = 84/441 (19%), Positives = 183/441 (41%), Gaps = 20/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + +P+ + + ++ + + + N+ GFR GK+P + +G
Sbjct: 1 MSAKWEKQEGNIGTLTIEVPAAEVDAAMDQAFKKVVKQINVPGFRKGKMPRKMFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ++ I+ + + + + P I E D
Sbjct: 61 ESLYQDALEIIVPDSYAKAIDEAGIMPVDYPEIAGTE--------NFVHGQDFSFTAQVT 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P+ ++ + L+V + EV ++E+D Q+ E E ++ GD +D+
Sbjct: 113 VKPEPKLGDYKGLEVAKLPVEVTDEEVDAQIQEQLARKAELEIKEDEAIVEGDTAVIDFE 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V + E ++ +GS E L G+K G+ K++ FPE++ +LAGK
Sbjct: 173 GFVGDEAFEGGKGEDYPLEIGSGSFIPGFEEQLTGVKAGESKDVVVTFPEEYHAAELAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++KEV + + +N++ A ES A+R ++ ++ +
Sbjct: 233 EATFKVTVKEVKTKVLPELNDEFAKELDSEVESVEALRAKIKEQTAAQKVAESDAALRDE 292
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
+++ S F+VP ++ +E + +LQ+ + + Q +E+
Sbjct: 293 LVEKASENAEFEVPAGMINSETDRMLQEFGQRLQTQGMNLDLYYQFSGQSEEDLRGQMKE 352
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ RV + L I E IE TE ++++ L + +F ++++ A L
Sbjct: 353 EAESRVRVSLTLEAIAEAEKIEATEADIEAELEKMAAQFNMTKEQITGAL----GGTAVL 408
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
I K ++ ++++ +I +
Sbjct: 409 ENDIKIQKTVEFLVENAKITE 429
>gi|172044190|sp|A4IRH3|TIG_GEOTN RecName: Full=Trigger factor; Short=TF
Length = 428
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 80/439 (18%), Positives = 183/439 (41%), Gaps = 21/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + ++ + + + ++ GFR GKVP + +G
Sbjct: 1 MSVKWEKLEGNEGVLTVEVDAEQVNKGLDAAFKKVVKNVSLPGFRKGKVPRVLFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E + + + P I I + E L +
Sbjct: 61 EALYQDALDILLPEAYAKAVEEAGIEPVSMPEIDIEQM---------EKGKSLIFKAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L+V + V +++++ ++ + +N VKE + D +D+
Sbjct: 112 VKPEVKLGQYKGLEVEKIDTTVTDEDVENKLKRLQENYAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS + LVG+K G++KEI+ FPE++ + LAGK
Sbjct: 172 GFVDGEPFEGGKAENYSLEIGSGTFIPGFEDQLVGMKAGEEKEIQVTFPEEYHAEQLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++ A E+ ++ ++++ + V+
Sbjct: 232 PATFKVKVHEVKAKQLPALDDEFAKDVDEEVETLDELKSKIRTRLEEAKKNEAEAAVRNA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+++ + D+P +V+NE + +L++ + Q + +
Sbjct: 292 VVEKAAANAEIDIPAVMVQNETDRMLREFDQRLQMQGMNLQLYYQFSGQDEAALREQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I + NI+VT+EE+ L + + K+ + L +
Sbjct: 352 DAEKRVRAALTLEAIAKAENIDVTDEEVNEELEKMAASYNLSVDKLKELI----GNLDGV 407
Query: 413 RAPIFEDKVIDHILKSVQI 431
+ + K +D +++ +
Sbjct: 408 KEDLKWRKTVDFLVEHSTV 426
>gi|238060620|ref|ZP_04605329.1| cell division trigger factor [Micromonospora sp. ATCC 39149]
gi|237882431|gb|EEP71259.1| cell division trigger factor [Micromonospora sp. ATCC 39149]
Length = 450
Score = 203 bits (516), Expect = 4e-50, Method: Composition-based stats.
Identities = 92/457 (20%), Positives = 183/457 (40%), Gaps = 23/457 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L + +P L S + +I S+ + GFR GKVP + I G+
Sbjct: 1 MKSTVETLSPTRVRLAIEVPFVELEPSLKKAYREIGSQVQVPGFRRGKVPATVIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L+E + E I + + + + D + RP + I E L D
Sbjct: 61 GTVLNEAVQEAIPQNILAAVREHDLKTLGRPEVEITE---------FNDGDSLNFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + + D ++VT D ++DE EID Q+ + + E + GD V +D
Sbjct: 112 VRPEITLPALDSIEVTVDELQIDESEIDEQVKNLRDRFATLKTVERAAAEGDYVQIDLNA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + S N+ VGS L E LVGL G+ D AG+
Sbjct: 172 TVDGEDVPGGSATNISHEVGSKQLLPGLDEALVGLAAGESTTFTTQLV----GGDFAGRD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +++ V +++D A F++ +RG +++ + + + L
Sbjct: 228 AEVSVTVRTVKEKELPELDDDFAQLASEFDTIEELRGDLRERVTRGKRVEQIYAARDKAL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----A 354
+ + PE +V E Q + ++ + + +E+ + A
Sbjct: 288 EQLVEAAGVPAPEGVVREEVESRKQAMIDQLERIGASLEEYLAAEEKTEEQVDAELNEAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
V ++L T+ + N++V+++E + + R ++ D + A A +
Sbjct: 348 TEGVKIQLLLDTLADAENVQVSDDEFGHEIVHRAQRAGMPPQQFYDQLVRS-GAAAAVFG 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSES 448
+ K + +++ + I D +V+ D + S E+
Sbjct: 407 DVRRGKALASVMERITIKDTAGNEVSLDAIRAESEEA 443
>gi|297626023|ref|YP_003687786.1| Trigger factor (TF) [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921788|emb|CBL56348.1| Trigger factor (TF) [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 527
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 79/476 (16%), Positives = 193/476 (40%), Gaps = 24/476 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P L + + I + N+ GFR GKVP I +G+
Sbjct: 1 MPSTVEKLNPTRVKLTIEMPFAELQPKIDAAYKQISEQVNLPGFRRGKVPARLIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + I++ I + + + + +P I + +E ++L D
Sbjct: 61 GAVLQQAINDAIPDAYSKAVQDNELFPLGQPDIEV---------SKLEDGDVVELSAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P +I F ++V + +V +++++ ++ + + + + ++ GD V D +
Sbjct: 112 VRPDFDIPDFSGIKVEVEPAKVSDEDVNERVELLRERFANLKEVDRAAKDGDVVNFDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D + D +Q+ VG+ + E LVG+K GD+K G+
Sbjct: 172 TQDGEPVPDAESNGMQYRVGAGGMVDGLDEALVGMKAGDEKSFS----SKLVGGSHGGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V + ++ +V +++D A F++ M +++ + + + +I+
Sbjct: 228 VDIKVTVNKVNEQELPALDDDFAQLVSEFDTVDEMLADLRDNLERMARIGQANEARDKIV 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI--------DEEDLQYY 350
+ + K F++P +++E + G ++ +++ + + EE
Sbjct: 288 EQVVEKVPFELPPAVLEADVKGYHDQIENQLNQSGLTLEQYLEEAEDEKADTPEEFWAEI 347
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A++ + IVL + E+ N+ V++EE + Q+ + ++ L H ++ N +
Sbjct: 348 DKRAEQGLRAQIVLDKLAEEQNVGVSQEEFTQLILQKAQQNGTTPEQELQHMSEH-NHMP 406
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
E + K ++ I+ + D L ++ + + + ++E
Sbjct: 407 EWMGEVRRGKALNTIVDEAVVTDTDGNAVDLKHLQADGTIAEPAADEKAEDADKAE 462
>gi|163841994|ref|YP_001626399.1| trigger factor [Renibacterium salmoninarum ATCC 33209]
gi|189035949|sp|A9WUW4|TIG_RENSM RecName: Full=Trigger factor; Short=TF
gi|162955470|gb|ABY24985.1| trigger factor, ppiase [Renibacterium salmoninarum ATCC 33209]
Length = 471
Score = 203 bits (516), Expect = 5e-50, Method: Composition-based stats.
Identities = 72/463 (15%), Positives = 171/463 (36%), Gaps = 25/463 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +LDV +P L S E + I + I GFR GK P I G+
Sbjct: 1 MKSAVENLSPTRVKLDVEVPFEELQPSIAEAYKTIAEQVQIPGFRKGKFPNRLIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L I+E + +++ R RP + I E +LK ++ D
Sbjct: 61 GYVLETAINEGLNGWYQNAVAETGLRPLSRPEVEITE-----VPDPAATDGELKFKVEVD 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + + V E +++ + + ++ + + + D +T+D
Sbjct: 116 VRPEVELPDYAGITVEVAPAEQSDEDRQKALDDLRGRFGTLKPADRPAAKDDFITIDINA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + ++ S + + VG+ + E + GL T ++ + + AG+
Sbjct: 176 KIADEDVD--SATGLSYQVGAGTMLEGLDEAVEGLSTDEEAIFDTKLV----GGEHAGEA 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + V ++D A F++ + +R +++ Q + + +++
Sbjct: 230 AQVTVKLTAVKVRELPEADDDFAQLASEFDTIAELREDLVKQVNQSKTVEQGVEARDKVM 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +PES++E + D EE +R
Sbjct: 290 EKLVELIEVPIPESVIEEQLEQHFDPANA--------HGEEDHDTEEHRVEVRENTERAF 341
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L + +K I V++ E+ + ++ + + + + + +
Sbjct: 342 KNEIILDAVADKEEISVSQAELIDYIVNSASQYGMDPNQFAQMLDQS-GQVPMVVSEVRR 400
Query: 419 DKVIDHILKSVQIVDRK---VTFDQLFDNSSESSPEKLLDKSS 458
K + H+L + D + V + + E L++++
Sbjct: 401 RKALAHVLGLATVTDTEGAAVDLSDFVKPAVDPELEAALNEAA 443
>gi|284030226|ref|YP_003380157.1| trigger factor [Kribbella flavida DSM 17836]
gi|283809519|gb|ADB31358.1| trigger factor [Kribbella flavida DSM 17836]
Length = 465
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 78/447 (17%), Positives = 177/447 (39%), Gaps = 20/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K L V +P L S + + I + + GFR GKVP I G+
Sbjct: 1 MKSTVESLSPTKVRLIVEVPFEELKPSLDAAYQSIAQQIVVPGFRKGKVPPQVIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ +L E I++ + ++ + + +A RP + + E +L+ +
Sbjct: 61 APVLEEAINDALPKLYSQAVQDNQVKAIGRPEVDVTE---------FNDKENLQFSAEVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ D L+ + + + + EI+ Q+ + + + E D +T+D +
Sbjct: 112 VRPEIELPDLDGLEASVEDIAISDDEIEEQIDALRQRFGSLNPVERAVADKDFITLDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D +E+ + + VGS L E ++GL G+ K F L G+
Sbjct: 172 TKDGEKIEEAQATGLSYQVGSGQLLDGLDEAVLGLTAGESK----TFVTQLVGGALKGED 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V + ++ V ++D A F++ ++ ++++ + +L
Sbjct: 228 VDVEVTVTAVKEQELPEFDDDFAQTASEFDTAEELKADVRTRLERGKRLEQAGDARDAVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEE----DLQYYHMLA 354
+ I VPE L+ +E + + ++ + + +E+ + +
Sbjct: 288 EKILTLVEVPVPEGLLTDEVAARRENLEQQLGYSGMTFEQFLESEEQTQEEFDEDLKKRS 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + VL + EK ++ V ++E+ + + R + H + N + L +
Sbjct: 348 EDAIKAQFVLDLVAEKQDLSVNDQELTEHIVRHAQRSGVSPDQFAQHAVEN-NLVPSLVS 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ K + +++++ +I D +L
Sbjct: 407 EVVRGKALAYLVENAKITDASGNEVEL 433
>gi|120404995|ref|YP_954824.1| trigger factor [Mycobacterium vanbaalenii PYR-1]
gi|166229908|sp|A1TCB8|TIG_MYCVP RecName: Full=Trigger factor; Short=TF
gi|119957813|gb|ABM14818.1| trigger factor [Mycobacterium vanbaalenii PYR-1]
Length = 473
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 76/475 (16%), Positives = 193/475 (40%), Gaps = 23/475 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L + + + + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEKLSPTRVRINVEVPFTELEPDIDRAFKQLAKQIRLPGFRPGKAPRKLLEARVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + +++ + E ++ + +P I + + +E +L D
Sbjct: 61 GAVLEQVVNDALPARYSEAVTAESLQPIGQPEIEVTK---------LEDNEELVFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P I++ L++T D V ++++D ++ + K + +E GD V++D +
Sbjct: 112 VRPDIDLPDLGALKITVDPISVTDEDVDAEIEALQKRFGTLTGVDRAAEDGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + + VGS L E ++GLK + K + AG++
Sbjct: 172 TVDGKDVPEANTEGLSHEVGSGQLIEGLDEAIIGLKADESKVFTTTLVAG----EHAGQE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K + V++D A F++ +R +KI + + ++ + +
Sbjct: 228 AEVTVTVKSIKVRELPEVDDDFAQLASEFDTVEELRADLKEKISRFKRVQQAEAIRDKAI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLA 354
+ + + VPE++V+ + + L + K EE A
Sbjct: 288 EVLLEQTEIPVPEAVVQAQVDDTLHNAIHGLDHDEDKFAESLKEQGSSREEFDADNRANA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ + T +++ +I +K I+V + ++ L ++ +++L + N L + A
Sbjct: 348 EKAIKTQLLMDSIADKLEIQVGQNDLTERLVLMSRQYGLEPQQLLQM-LQQNNQLPAMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
+ + ++ + D ++ + F S E + + + + + +
Sbjct: 407 DVRRGLTVAAVVHGATVTDTDGAEIDTAEFFGPSGEQAEAEQDEAAPAEDATEET 461
>gi|310820093|ref|YP_003952451.1| trigger factor [Stigmatella aurantiaca DW4/3-1]
gi|309393165|gb|ADO70624.1| Trigger factor [Stigmatella aurantiaca DW4/3-1]
Length = 426
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 75/434 (17%), Positives = 183/434 (42%), Gaps = 14/434 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + ++++L + + S R++D + + + GFR GKVP ++ + +
Sbjct: 1 MKVQVEELSPVEKKLSIEVDSTRVSDELTRAYTALGRQVKLPGFRQGKVPRRILEQRFRQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + I +++ E + + +P +T + ++ ++
Sbjct: 61 QVEDDVIQRVVQSAYVEAVREHKVEVVSQPQVT---------NSGLKAGAPFSFEARVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
P++E+ + +L + + VD+ ++ Q+ ++ ++ E + GD VTVDY
Sbjct: 112 KPKLELKDYKELPLKKTEVSVDDAQVSEQVEKMRQSLTRLEPVTDRDVAQSGDVVTVDYE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D ++V V +L L G K GD KE++ FP D+ ++++ GK
Sbjct: 172 ALIDGQPFAGNKAEDVAVNVAPGELVESNLAALEGAKVGDTKELDYAFPPDYRVEEVKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL--GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K + + + +N++ A G E+ A+R +++ + + +
Sbjct: 232 TAHFKMHVKGLKTKVVPELNDEFAKETGVGVETLEALRAKVKADLERSQRTKIDAEDRDT 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++ + + F+VP+++VE + +L+ +M+ + +N++ + A +
Sbjct: 292 VIKGLIERNPFEVPKAMVERAIDSMLEGAMRQMARSGLDVRNLNLDFLRLREEMRERAIQ 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V ++ I EK I+ TE +++ + + +F+ + L +
Sbjct: 352 EVKGTLLFEAIAEKEGIQATEGDVEKKIEDLAAEAGQPVSAVRKYFKSAEERMG-LSLRL 410
Query: 417 FEDKVIDHILKSVQ 430
E+K I+ + +
Sbjct: 411 REEKTIEFLKAQAK 424
>gi|239979448|ref|ZP_04701972.1| trigger factor [Streptomyces albus J1074]
gi|291451318|ref|ZP_06590708.1| trigger factor [Streptomyces albus J1074]
gi|291354267|gb|EFE81169.1| trigger factor [Streptomyces albus J1074]
Length = 465
Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats.
Identities = 92/478 (19%), Positives = 193/478 (40%), Gaps = 21/478 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEGELNVLGQPEVDITE---------LKDGELLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+IEI + ++V D EV ++++D+ + E+ + + E +E GD VT+D
Sbjct: 112 IRPEIEIPDYSGIEVEVDPVEVTDEDVDKAVEELRERFASTAPVERPAEDGDVVTLDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED +V + +GS +L + + GL+ G E F + AGK+
Sbjct: 172 KVDGEVLEDGLASDVSYTIGSGELLDGIDDAVKGLEAG----GEATFTSELKGGSAAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V +++D A F++ +R ++++ ++ + + ++L
Sbjct: 228 AEITVKVSKVAKRELPELDDDFAQLASEFDTLEEVRADSRKRLENMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-----QKSQNVDSIDEEDLQYYHML 353
D + +PE L+E+E N + + + EE
Sbjct: 288 DALLELAEVPIPEKLLEDEVNTRKHNLEHHQLGQMGLDLAKYLEIQGKTAEEFDAETREQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T +L + K + V +EE+ L ++ + + + L
Sbjct: 348 AIKGIKTQFILDELVNKEKLNVDQEELTEHLMRRAASSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ K + ++++V + D L D+ E++ +A S+
Sbjct: 407 GEVARGKALAVVVEAVTVKDTNGEVVDLSDDEDEAAEATEAAAGQTEGDAAEAKADSD 464
>gi|73662398|ref|YP_301179.1| trigger factor [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|119370940|sp|Q49YA7|TIG_STAS1 RecName: Full=Trigger factor; Short=TF
gi|72494913|dbj|BAE18234.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 436
Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats.
Identities = 81/448 (18%), Positives = 192/448 (42%), Gaps = 21/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGVLSVTVPAEKVDKAIDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + + +P I + IE ++ +
Sbjct: 61 EALYQDAVDILLPEAYGEAIDETGIKPVDQPEINVTS---------IEKGKEMTFEANVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L+V + E+ ++E+ + + ++ E GD V +D+
Sbjct: 112 VEPEVQLGDYKGLEVEKQDVELTDEELQESIDHQLGHLAEMVVKEDGAIENGDTVNIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +GS E LVG+KTG++K++ FPE++ ++LAGK
Sbjct: 172 GYVDGEQFEGGQAEGYDLEIGSGSFIPGFEEQLVGVKTGEEKDVNVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ + +++A L E + + +++ + E K +
Sbjct: 232 EATFKTKVNEIKYKDVPELTDEIANELDSEANTVDEYKENLRKRLTEQKETDAENNQKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ +N + DVP++++ E + ++Q+ M + + + +
Sbjct: 292 AINKAANNASIDVPDAMINTELDRMVQEFGQRMQQQGLNLETYFQISGQDESQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ RV T + L I + +IEV+++++ L + +F + + +
Sbjct: 352 DAEERVKTNLTLTAIADAEDIEVSDDDIDKELEKMSEQFNISVEDIKQTL----GNTDIV 407
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
+ + KVID ++ ++V+ +
Sbjct: 408 KNDVRIQKVIDLLVDEAKLVEPSKDDSE 435
>gi|291533784|emb|CBL06897.1| trigger factor [Megamonas hypermegale ART12/1]
Length = 430
Score = 203 bits (515), Expect = 7e-50, Method: Composition-based stats.
Identities = 91/437 (20%), Positives = 189/437 (43%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E K L + +P+ L + + ++ NI GFR GK P ++ GK
Sbjct: 1 MNVTTEKIENHKVVLTIEVPAEELDKGIKAACKSLANRVNIPGFRKGKAPRRILEMNIGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E D + ++ E L + + RP + I +E D+ + +
Sbjct: 61 EAILDEAFDRVAQKAFDEALKQENLDPVDRPQVDIVT---------LEEGKDVVFKATIT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE--IGDKVTVDY 177
+P++ + + L+V +D EV +++++ Q+ I ++ E + D +T+D+
Sbjct: 112 PVPEVTLGEYKGLKVAKDAVEVKDEQVEEQVKNILNHHAKMVDAEEGATVANDDFITLDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD V K+ +GS + LVGLK G++K++ FPE++ KDLAG
Sbjct: 172 KGEVDGVAFAGGEGKDYPLQIGSHSFIDTFEDQLVGLKVGEEKDVNVTFPEEYHAKDLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K + I + + ++ +ES M+ + I+++++ K + +
Sbjct: 232 KAAVFHCKINSIKHKEMPELTDEFVKASTSYESIEDMKAKLRENIEKNAQREADTKRRNE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
IL ++ T D+PE +VEN + ++Q++ + + + + + + Y
Sbjct: 292 ILKQATDNITVDIPEVMVENRVSNMIQELSVNLENQGMNLDAYLKYANMDMAKLREQYKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A V T ++L + + +I+V ++ + + + +++ +K + + L
Sbjct: 352 SAAIAVKTDLMLDAVAKAEDIKVENADINAEIALLAATYGTTPQEVSKIIKKNHS-IGNL 410
Query: 413 RAPIFEDKVIDHILKSV 429
A + K + I+ S
Sbjct: 411 VATVLHKKAANFIIDSA 427
>gi|291518667|emb|CBK73888.1| trigger factor [Butyrivibrio fibrisolvens 16/4]
Length = 444
Score = 202 bits (514), Expect = 7e-50, Method: Composition-based stats.
Identities = 77/435 (17%), Positives = 181/435 (41%), Gaps = 17/435 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L V + + L + + ++ ++ GFR GKVP ++ +YG
Sbjct: 1 MNVQVENLEKNMAKLTVTVDAAELEKAITKAYNKQKNSISVPGFRKGKVPQHMVEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + I++E P+ + +P + I + +E D +
Sbjct: 61 EIFYEDAANIIMQETYPQAYDESKLDIVSQPQVDITQ---------LEKGKDFIYTATVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + + VT+ +V E++ + + + K+ ++ GD +D+
Sbjct: 112 VKPEVKLGKYKGVSVTKIDSKVTATEVNESIKAELERDARMVTKKGKAANGDTAVIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D+V E +N ++GS + LVG K G+ ++E FPE + +DLAGK
Sbjct: 172 FIDDVAFEGGKGENYDLVLGSGSFIPGFEDQLVGHKAGEDVDVEVTFPETYQAEDLAGKA 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I EV ++++ FE+ + ++++ + + R+ + + +
Sbjct: 232 AVFKCHIHEVKKKDVPKLDDEYVSDHTEFETVDEYKASVKERLENNKKTEGRRAQEDEAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLA 354
I ++P+++++ + ++ M+ Q Q + + A
Sbjct: 292 AKIVEDSEMEIPDAMLDYQVENMINDFANNMAQQGLSLQQYMQFTGMTMDAFREQVRPDA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
R + +VL I + IE T+ ++ + L + ++ +++ + + ++
Sbjct: 352 LSRTQSSLVLEAIAKAEKIEATDADVDAKLEEMSKQYGMELEQIKNLVGENE--KESMKK 409
Query: 415 PIFEDKVIDHILKSV 429
I +K I+ I+ +V
Sbjct: 410 DIAIEKAIELIMDNV 424
>gi|314936220|ref|ZP_07843567.1| trigger factor [Staphylococcus hominis subsp. hominis C80]
gi|313654839|gb|EFS18584.1| trigger factor [Staphylococcus hominis subsp. hominis C80]
Length = 438
Score = 202 bits (514), Expect = 8e-50, Method: Composition-based stats.
Identities = 82/445 (18%), Positives = 190/445 (42%), Gaps = 21/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLKVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + +P I + + IE D + +
Sbjct: 61 EALYQDAVDILLPEAYGEAIEETKINPVAQPEINVTQ---------IEKGKDFEFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ +K++ + + ++ E GD V +D+
Sbjct: 112 VEPEVKLGDYKGLEIEKQDSELTDKDLQDAIDHSLGHLADMVVKEDGAVEEGDTVNIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +GS + LVG+KTG++K++ FPE++ ++LAGK
Sbjct: 172 GYVDGEQFEGGQADGYDLEIGSGSFIPGFEDQLVGVKTGEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ + +++A L + S + +++ + K +
Sbjct: 232 EATFKTKVNEIKYKEVPELTDEIANELDSDANSVDEYKENLRKRLSEEKAQDAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ + T D+P+++++ E + ++Q+ + Q + + +
Sbjct: 292 AINKATENTTIDIPQAMIDTELDRMVQEFGQRIQQQGLDLQTYFQISGQDESQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I ++ NIEVT+E++ L + +F + + +
Sbjct: 352 DAEQRVKTNLTLSAIADEENIEVTDEDIDKELEKMSSQFNISVEDIKQTL----GNTDII 407
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVT 437
+ + KVID + + + VD
Sbjct: 408 KNDVRIQKVIDLLRDNAKYVDSAKD 432
>gi|332678357|gb|AEE87486.1| Cell division trigger factor [Francisella cf. novicida Fx1]
Length = 438
Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats.
Identities = 99/451 (21%), Positives = 207/451 (45%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + ++ I + GFRPGKVP +K YG+
Sbjct: 1 MQVTVEKKEGIHCSLLIEVPANEIDSVVSKEINRTAKTIKMDGFRPGKVPAGMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P E++ F+ ++V + + E+ +KE+ + + + K F + E DKVT+D+
Sbjct: 111 FPDFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQFATFSEVDKVVEKDDKVTIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + + I+GS + + ++G+K G+QK I FP+D+ KDLAG +
Sbjct: 171 KDGEAFEGGTANDTDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAGAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGIKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E + Q + +M A N + + AK++V
Sbjct: 291 GLREIAEFETPKSLIKREIDAAKQNLLKQMGGAKGFDVN-----QLPDNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K +K +A L+A + E+
Sbjct: 346 TSLILDSIMNSQEFKAEEAEVESLLDELVQAY-EEPEKTKQQIKKNDKEMANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|254382772|ref|ZP_04998129.1| cell division cell division trigger factor [Streptomyces sp. Mg1]
gi|194341674|gb|EDX22640.1| cell division cell division trigger factor [Streptomyces sp. Mg1]
Length = 467
Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats.
Identities = 82/457 (17%), Positives = 182/457 (39%), Gaps = 21/457 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ D +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEADLNPLGQPEVDITE---------LKDGELLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IEI + ++V D EV E+++++ + ++ + + E + GD VT+D
Sbjct: 112 VRPEIEIPDYSGIEVEVDAIEVSEEDVEKSVEQLRGRFASTKDVERAATEGDVVTLDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +L D +V + +GS +L E + GL+ G E F GK
Sbjct: 172 KVDGEVLPDGVASDVSYTIGSGELLDGIDEAVKGLEAG----GEATFTSQLKGGSAEGKD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + ++++ A + F++ ++ +++ ++ + + ++L
Sbjct: 228 AEVTVKVTKVSARELPELDDEFAQMASEFDTLEELKADSRTRLENMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
+ + +PE L+ +E + + + EE
Sbjct: 288 EKLLELVEVPIPEKLLADEVQTRKHNLEHHQLGQMGLTIEKYLEFQGKTVEEFDAETSEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + K + V +EE+ L ++ + + + L
Sbjct: 348 AIKGIKTQFVLDALVNKEKLGVNQEELTEHLMRRAQSSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
+ K + ++++ ++ D L D+ E+
Sbjct: 407 GEVARGKALAVVVEAAKVTDTNGEVVDLSDDEDEAET 443
>gi|29831989|ref|NP_826623.1| trigger factor [Streptomyces avermitilis MA-4680]
gi|41018195|sp|Q82CA7|TIG_STRAW RecName: Full=Trigger factor; Short=TF
gi|29609107|dbj|BAC73158.1| putative cell division trigger factor [Streptomyces avermitilis
MA-4680]
Length = 463
Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats.
Identities = 88/477 (18%), Positives = 192/477 (40%), Gaps = 21/477 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEAELNPLGQPEVDITE---------LKDGETLNFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P IEI + ++V D EV ++++++ + E+ + + E +E GD VT+D
Sbjct: 112 VRPTIEIPDYSGIEVEVDAVEVSDEDVEKAVTELRERFASTSPVERAAEDGDVVTLDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED + V + +GS +L + + GL+ G E F + AGK+
Sbjct: 172 KVDGEVLEDGVAEGVSYTIGSGELLDGIDDAVKGLEAG----GETTFTSELKGGSAAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +++D A F++ ++ ++++ ++ + + ++L
Sbjct: 228 AEVTVKVSQVAARELPELDDDFAQLASEFDTLEELKADSRKRLENMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
+ + VPE L+E+E N + + + EE
Sbjct: 288 EKLLELAEVPVPEKLLEDEINTRKHNLEHHQLGQMGLDLEKYLEIQGKTVEEFDAETKEA 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + K + V +EE+ L ++ + + + L
Sbjct: 348 AVKGIKTQFVLDELVNKEKLNVNQEELTEHLMRRAASSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ K + ++++ + D L D S + + + E ++ +
Sbjct: 407 GEVARGKALAVVVEAATVKDTNGEIVDLDDEDETESTPETTEAAEAAEESTEDKPEA 463
>gi|157826317|ref|YP_001494037.1| trigger factor [Rickettsia akari str. Hartford]
gi|166229926|sp|A8GQ54|TIG_RICAH RecName: Full=Trigger factor; Short=TF
gi|157800275|gb|ABV75529.1| trigger factor [Rickettsia akari str. Hartford]
Length = 445
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 112/452 (24%), Positives = 219/452 (48%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +EGL + P + + D + + D+ K I GFR GKVP+S +K YG
Sbjct: 1 MGITVLKNEGLDFHARISTPLSEIDDDIQKELLDLTKKVKIAGFRAGKVPVSIVKQKYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ ++ I+ I V ++ K + RP I + E D L + ++
Sbjct: 61 SVRNDVIERRINHSVNHVIKKHNLSIIGRPKIEALQNEPD---------KALAFTVKIEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP++ I + + + EV+ K+++ Q+ ++A ++ + + + + GD+VT+D
Sbjct: 112 LPKVTIPDLKKISLDRPKLEVNAKDVEEQLEKLAALTKSYTKESKAKIKDGDQVTIDAIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + E +++ ++GS L + L+G KTG + ++ FPE++ KDLAGK+
Sbjct: 172 YIKDEAFEGGQLNDLKVVIGSNALIPSFEKQLIGSKTGSEVDVNVTFPENYHSKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
R IK V + P V++++ A + S +R +++I+ SE + +K + D
Sbjct: 232 ARFAVQIKAVHTAEPTVIDDEFAKKFQSNSLEELRTHFAKQIENESEEAINTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVP SL+E E N + + + +E +YY+ +A RRV
Sbjct: 292 QLEKLLDFDVPASLLEQEKNILKSETDKNNQDESLLKD---KSPKEITEYYNKVALRRVR 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++++ + Q+ FPG E + D ++ P+A+ L+ P ED
Sbjct: 349 IGLLLAEYAKSKNLQLEPDDLRKVIMQRARNFPGQENMIFDFYKNNPSAIEGLKGPALED 408
Query: 420 KVIDHILKS-VQIVDRKVTFDQLFDNSSESSP 450
K + +I + +++ ++K T ++L
Sbjct: 409 KAVQYIFNNEIKLKEKKYTKEELEKYLEAEEQ 440
>gi|227833721|ref|YP_002835428.1| trigger factor [Corynebacterium aurimucosum ATCC 700975]
gi|262184727|ref|ZP_06044148.1| trigger factor [Corynebacterium aurimucosum ATCC 700975]
gi|254788997|sp|C3PI36|TIG_CORA7 RecName: Full=Trigger factor; Short=TF
gi|227454737|gb|ACP33490.1| trigger factor [Corynebacterium aurimucosum ATCC 700975]
Length = 451
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 72/447 (16%), Positives = 179/447 (40%), Gaps = 20/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +L V +P L ++ I + +I GFR GK P I + +G+
Sbjct: 1 MKTTVDKLSDTRVKLTVNVPFAELDKEIDQAYAAIAQQVSIPGFRKGKAPRQLIDARFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL + +++++ + +++ D + +P I I +E ++ D
Sbjct: 61 GPILEQVVNDMLPSRYEQAVTENDLKVIGQPEIDI---------AKLEDNDFVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+ E+ F + V E E+++D+ + ++A + + + + GD +D T
Sbjct: 112 IRPEFEVPDFSKISVKVPALETSEEDVDKALEDLASRFGELKDTKRKMKTGDYAIIDITT 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD L++ S + + + +G +L L G+KT + E + G +
Sbjct: 172 EVDGTKLDEASHEGMTYRIGDDNLIKGLDTALRGMKTDEDNEFTTTIQSG----EHEGDE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ ++++ A + F++ +R ++++ + ++ ++L
Sbjct: 228 ATVKVHVQQSKERKLPDLDDEFAQMASEFDTIDELREDTKTRVEESKKSEQAAAIRDEVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY----HMLA 354
+ +F++P S+V+ + + L +V +++ + + + + A
Sbjct: 288 KAALEEVSFELPSSIVDEQVHAQLHQVMGQLAHDEKALAQLLEAQGTTREEFDADARKSA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V T + L + E EV+++E+ + + + + Q N L L +
Sbjct: 348 EESVRTQLFLDALAEIEEPEVSQQELTDHILFTAQSYGMDPNQFIQQLQSS-NQLGNLFS 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ K + + ++ D +
Sbjct: 407 DVRRGKALATAICRAEVTDEAGNKVDV 433
>gi|239948117|ref|ZP_04699870.1| trigger factor [Rickettsia endosymbiont of Ixodes scapularis]
gi|239922393|gb|EER22417.1| trigger factor [Rickettsia endosymbiont of Ixodes scapularis]
Length = 439
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 116/451 (25%), Positives = 219/451 (48%), Gaps = 14/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +EGL + P + + D + + D+ K I GFR GKVP+S +K YG
Sbjct: 1 MGITVLKNEGLDFHARISTPLSEIDDDIQKELLDLTKKVKIAGFRAGKVPVSIVKKKYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ ++ I+ I V ++ + + RP I + E D L+ + ++
Sbjct: 61 SVRNDIIERRINHSVNHVIKEHNLNIIGRPKIEELQNEPD---------KALEFTVKIEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP+I I + + + EV+ K+++ Q+ ++A + ++ + + + + GD+VT+D
Sbjct: 112 LPKITIPDLKKISLDRPKLEVNSKDVEEQLEKLAASTKSYTKESKAKIKDGDQVTIDAIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + E + + ++GS L + L+G KTG + ++ FPE++ KDLAGK
Sbjct: 172 YIKDEAFEGGKLNDFKVVIGSNTLIPGFEKQLIGSKTGSEVDVNVTFPENYHAKDLAGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
R IK V + P V++ + A + S +R +++I+ SE + +K + D
Sbjct: 232 ARFAVQIKVVHTAEPTVIDEEFAKKFQSNSLEELRTHFTKQIENESEEAINTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL+E E N + + + +E +YY+ LA RRV
Sbjct: 292 KLEKLLDFDVPESLLEQEKNILKSETDKNDQDESLLKD---KSSKEITEYYNKLALRRVR 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++++ + QQ FPG E + D ++ P A+ L+ P ED
Sbjct: 349 IGLLLAEYAKSKNLQLEPDDLRKVIMQQARNFPGQENMIFDFYKNNPRAIEGLKGPALED 408
Query: 420 KVIDHILKS-VQIVDRKVTFDQLFDNSSESS 449
KV+ +I + +++ ++K T ++L
Sbjct: 409 KVVQYIFNNEIKLKEKKYTKEELEKYLEAEE 439
>gi|118497649|ref|YP_898699.1| trigger factor [Francisella tularensis subsp. novicida U112]
gi|194323620|ref|ZP_03057396.1| trigger factor [Francisella tularensis subsp. novicida FTE]
gi|166229047|sp|A0Q6T0|TIG_FRATN RecName: Full=Trigger factor; Short=TF
gi|118423555|gb|ABK89945.1| trigger factor (TF) protein (peptidyl-prolyl cis/trans isomerase)
[Francisella novicida U112]
gi|194321984|gb|EDX19466.1| trigger factor [Francisella tularensis subsp. novicida FTE]
Length = 438
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 99/451 (21%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + ++ I + GFRPGKVP +K YG+
Sbjct: 1 MQVTVEKKEGIHCSLLIEVPANEIDSVVSKEINRTAKTIKMDGFRPGKVPAGMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F + E DKVT+D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQFATFSEVDKAVEKDDKVTIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + + I+GS + + ++G+K G+QK I FP+D+ KDLAG +
Sbjct: 171 KDGEAFEGGTANDTDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAGAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGVKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E + Q + +M A N + + AK++V
Sbjct: 291 GLREIAEFETPKSLIKREIDAAKQNLLKQMGGAKGFDVN-----QLPDNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K + +K +A L+A + E+
Sbjct: 346 TSLILDSIMNSQEFKAEEAEVESLLDELVQAY-EEPEKTKEQIKKNDKEMANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|300934282|ref|ZP_07149538.1| trigger factor [Corynebacterium resistens DSM 45100]
Length = 561
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 77/472 (16%), Positives = 192/472 (40%), Gaps = 20/472 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + ++ V +P L F++ + + N+ GFR GK P +++ G+
Sbjct: 38 KSSVEKLSATRTKITVEVPFEELKPEFDKAYASLAQQVNMPGFRKGKAPAKLLEARLGRG 97
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L + I+E++ + + + + + +P I I E +E +K D+
Sbjct: 98 VVLDQVINEMLPSRYSQAVEEHELKVLSQPDIDITE---------LEDGKHVKFTAEVDV 148
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I++ F + V D + DEK +D ++ + + E + GD V++D + +
Sbjct: 149 RPEIDVPDFSKISVEVDAIKADEKAVDEELKNLQARFGTLKPVERAVKKGDFVSIDLSAT 208
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D +++ + + + VG+ L + LVG+K G++ + A ++
Sbjct: 209 IDGETVDEATTEGLSHEVGNDSLIEGLDDTLVGMKEGEENTFT----SKLVAGEHADEEA 264
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + V +++D A F++ +R +++ + +++ ++L+
Sbjct: 265 EVTVKVVSVKERELPELDDDFAQLASEFDTLDELRDSLKSQVEAQLKNTQAGQIRDKVLE 324
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLAK 355
+ +PES+V+ + +G +Q++ + + +++ D E+ + A+
Sbjct: 325 AALEQVEVPLPESVVKEQVDGQIQQIIGQFGGDEKVFESMLAAQDMTREKFEEDARKSAE 384
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
V T + L + + V++EE+ + ++ + + Q+ N L L A
Sbjct: 385 DSVRTQLFLDALADVEQPNVSQEELMDHIAFTANQYGMDPNQFIMQLQQ-ANQLGSLFAD 443
Query: 416 IFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEE 467
+ K + + + D + E E +K + + +
Sbjct: 444 VRRGKALALNIAKTSVKDSDGSAVDPKQFFGEEESEATEADDTKAKAKEDKP 495
>gi|239637527|ref|ZP_04678499.1| trigger factor [Staphylococcus warneri L37603]
gi|239596745|gb|EEQ79270.1| trigger factor [Staphylococcus warneri L37603]
Length = 433
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 84/441 (19%), Positives = 194/441 (43%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +PS ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLTVTVPSEKVDKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + +P + + + IE D +
Sbjct: 61 EALYQDAVDILLPEAYGEAIDETGINPVAQPEVNVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ ++E++ + + ++ E GD V +D++
Sbjct: 112 VEPEVQLGDYKGLEIEKQDSELTDEELEESINHSLGHMAEMVVKEDGAVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + VGS E L G+KTG++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFEGGQAEGYDLEVGSGSFIPGFEEQLEGMKTGEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ +N+++A L E S + +++ + K +
Sbjct: 232 EATFKTKVNEIKYKDVPELNDEIANELDAEANSVDEYKENLRKRLAEQKATEAENTEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
+ ++ T D+P+++++ E + ++Q+ + Q + + +
Sbjct: 292 AIKKATDNATIDIPQAMIDTELDRMVQEFGQRIQQQGLDLQTYFQISGQDESQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I + NIEV++E++ L + +F + + + +
Sbjct: 352 DAEQRVKTNLTLTAIADAENIEVSDEDIDKELEKMSEQFNISVEDIKNTL----GNTDIV 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + ++V+
Sbjct: 408 KNDVRIQKVIDLLKDNAKLVE 428
>gi|228475191|ref|ZP_04059917.1| trigger factor [Staphylococcus hominis SK119]
gi|228270802|gb|EEK12204.1| trigger factor [Staphylococcus hominis SK119]
Length = 438
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 83/445 (18%), Positives = 190/445 (42%), Gaps = 21/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLKVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + +P I + + IE D + +
Sbjct: 61 EALYQDAVDILLPEAYGEAIEETKINPVAQPEINVTQ---------IEKGKDFEFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ +K++ + + ++ E GD V +D+
Sbjct: 112 VEPEVKLGDYKGLEIEKQDSELTDKDLQDAIDHSLGHLADMVVKEDGAVEEGDTVNIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +GS + LVG+KTG++KE+ FPE++ ++LAGK
Sbjct: 172 GYVDGEQFEGGQADGYDLEIGSGSFIPGFEDQLVGVKTGEEKEVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ + +++A L + S + +++ + K +
Sbjct: 232 EATFKTKVNEIKYKEVPELTDEIANELDSDANSVDEYKENLRKRLSEEKAQDAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ + T D+P+++++ E + ++Q+ + Q + + +
Sbjct: 292 AINKATENTTIDIPQAMIDTELDRMVQEFGQRIQQQGLDLQTYFQISGQDESQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I ++ NIEVT+E++ L + +F + + +
Sbjct: 352 DAEQRVKTNLTLSAIADEENIEVTDEDIDKELEKMSSQFNISVEDIKQTL----GNTDII 407
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVT 437
+ + KVID + + + VD
Sbjct: 408 KNDVRIQKVIDLLRDNAKYVDSAKD 432
>gi|242373967|ref|ZP_04819541.1| trigger factor [Staphylococcus epidermidis M23864:W1]
gi|242348321|gb|EES39923.1| trigger factor [Staphylococcus epidermidis M23864:W1]
Length = 433
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 82/441 (18%), Positives = 191/441 (43%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGVLTVTVPAEKVDKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + +P +++ + IE D +
Sbjct: 61 EALYQDAVDILLPEAYGEAIDETGINPVAQPEVSVTQ---------IEKGKDFIFDATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++E+ + L++ + E+ ++E+ + + ++ E G+ V +D++
Sbjct: 112 VEPEVELGEYKGLEIEKQDTELTDEELQESIDHSLGHLAEMVVKEDGAVENGNTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + VGS E L G+KTG++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFEGGQAEGYDLEVGSGSFIPGFEEQLEGMKTGEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ + +++A E+ + +++ + K +
Sbjct: 232 EATFKTKVNEIKYKEVPELTDEVANELDSNAETVDEYKENLRKRLSEQKATEAENTEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ ++ T D+PE++V E + ++Q+ + Q +E+ +
Sbjct: 292 AINKATDNTTIDIPEAMVNTELDRMIQEFGQRIQQQGLDLQTYYQISGQNEEQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I + N+EV++E++ L + +F + + +
Sbjct: 352 DAEQRVKTNLTLTAIADAENVEVSDEDIDKELEKMSEQFNISVEDIKSTL----GNTDIV 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKYVE 428
>gi|208779710|ref|ZP_03247054.1| trigger factor [Francisella novicida FTG]
gi|208744165|gb|EDZ90465.1| trigger factor [Francisella novicida FTG]
Length = 438
Score = 202 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 99/451 (21%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + ++ I + GFRPGKVP +K YG+
Sbjct: 1 MQVTVEKKEGIHCSLLIEVPANEIDSVVSKEINRTAKTIKMDGFRPGKVPAGMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F + E DKVT+D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQFATFSEVDKTVEKDDKVTIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + + I+GS + + ++G+K G+QK I FP+D+ KDLAG +
Sbjct: 171 KDGEAFEGGTANDTDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAGAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGVKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E + Q + +M A N + + AK++V
Sbjct: 291 GLREIAEFETPKSLIKREIDAAKQNLLKQMGGAKGFDVN-----QLPDNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K + +K +A L+A + E+
Sbjct: 346 TSLILDSIMNSQEFKAEEAEVESLLDELVQAY-EEPEKTKEQIKKNDKEMANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|254374464|ref|ZP_04989945.1| trigger factor [Francisella novicida GA99-3548]
gi|151572183|gb|EDN37837.1| trigger factor [Francisella novicida GA99-3548]
Length = 438
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 99/451 (21%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + ++ I + GFRPGKVP +K YG+
Sbjct: 1 MQVTVEKKEGIHCSLLIEVPANEIDSVVSKEINRTAKTIKMDGFRPGKVPAGMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F + E DKVT+D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQFATFSEVDKVVEKDDKVTIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + + I+GS + + ++G+K G+QK I FP+D+ KDLAG +
Sbjct: 171 KDGEAFEGGTANDTDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAGAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGVKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E + Q + +M A N + + AK++V
Sbjct: 291 GLREIAEFETPKSLIKREIDAAKQNLLKQMGGAKGFDVN-----QLPDNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K + +K +A L+A + E+
Sbjct: 346 TSLILDSIMNSQEFKAEEAEVESLLDELVQAY-EEPEKTKEQIKKNDKEMANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|172045672|sp|A8F2Y2|TIG_RICM5 RecName: Full=Trigger factor; Short=TF
Length = 445
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 118/452 (26%), Positives = 216/452 (47%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +EGL + P + + D + + D+ K I GFR GKVP+S +K YG
Sbjct: 1 MGITVLKNEGLDFHARISTPLSEIDDDIQKELLDLTKKVKIAGFRAGKVPVSIVKKKYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ ++ I+ I V ++ + + RP I + ESD L+ + ++
Sbjct: 61 SVRNDIIERKINHSVNHVIKEHNLNIIGRPKIEELQNESD---------KALEFTVKIEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP+I I F + + + EV+ K+++ Q+ ++A + + + + + GD+VT+D
Sbjct: 112 LPKITIPDFKKISLDRPKLEVNSKDVEEQLEKLAALTKNYTKESKAKIKAGDQVTIDAIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ +D + + I+GS L + L+G KTG + ++ FPE++ KDLAGK
Sbjct: 172 YIKEKAFKDGKLNDFKVIIGSNALIPGFEKQLIGSKTGSEIDVNVTFPENYHAKDLAGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
R IK V + P V++++ A + S +R +++I+ SE + +K + D
Sbjct: 232 ARFVVQIKAVHTAEPTVIDDEFAKKFQSNSLEELRTHFTKQIENESEEAINTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL+E E N + + +E YY+ LA RRV
Sbjct: 292 KLEKLLDFDVPESLLEQEKNILKSGTDKNEQDESLLKD---KSSKEITAYYNKLALRRVR 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++++ + QQ FPG E + D ++ P A+ L+ P ED
Sbjct: 349 IGLLLAEYAKSKNLQLEPDDLRKVIMQQARNFPGQENMIFDFYKNNPRAIEGLKGPALED 408
Query: 420 KVIDHILKS-VQIVDRKVTFDQLFDNSSESSP 450
K + +I +++ ++K T ++L
Sbjct: 409 KAVQYIFNHEIKLKEKKYTKEELEKYLEAEEQ 440
>gi|258404643|ref|YP_003197385.1| trigger factor [Desulfohalobium retbaense DSM 5692]
gi|257796870|gb|ACV67807.1| trigger factor [Desulfohalobium retbaense DSM 5692]
Length = 448
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 97/464 (20%), Positives = 205/464 (44%), Gaps = 19/464 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +++++ V +P+ + + I R I GFR GKVP S ++S +
Sbjct: 1 MEYQVENISPVEKKITVTVPAEEVNAALGAAIAMYRKDVQIDGFRKGKVPSSIVESKFKS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E ++++ + +I+ + + + + E D D S++
Sbjct: 61 QIYQEATNDLLNVHINQIMGELNLQPLSGLDVDAKEMVRD---------QDYIYTFSFEN 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
+P I++ + L T++ E E++I + + +N + E ++ + G+ VD+T
Sbjct: 112 VPDIDLPEYKGLSGTKEKVEAKEEDIQEVLDRVRQNMASMEEVDEDRTPKDGEVAVVDFT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D +E +N +G E E++ L G+Q E + FP D KDLA
Sbjct: 172 AEYDGKPVEGGEAQNFDLPLGEGQSLPEFEELVKTLTPGEQAEEDITFPSDFLNKDLADV 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + ++K + + V++D A GF S MR S+ + + + + ++ I
Sbjct: 232 TVNMKVTLKAIKQRVLPEVDDDFAEKAGGFGSAEEMRKAISESYENSRNQVAKSEAQKAI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD I + F +P S+VEN+ +++ R + + ++ + +E+ + Y A+
Sbjct: 292 LDKILEQVDFPLPPSMVENQIQAQIKQQRERLERQGKSLESTGTSEEQLREEYRPEAESL 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V + +VL I K + V+ +E++ LYQ + + + ++ +K N + LR +
Sbjct: 352 VKSHLVLLAIANKEELSVSPQEVEQHLYQMAVQSGQDFQTLKEYHEKN-NLMYALRDQLL 410
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVE 461
DK ++ I + ++ + S + S ++ +++ E
Sbjct: 411 ADKAMELIYDNAEVTEVP------AGGSDQESSDEDDSAATENE 448
>gi|310643607|ref|YP_003948365.1| trigger factor [Paenibacillus polymyxa SC2]
gi|309248557|gb|ADO58124.1| Trigger factor [Paenibacillus polymyxa SC2]
Length = 437
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 83/437 (18%), Positives = 193/437 (44%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + E L+V + ++R+ + ++ + + ++ GFR GKVP + YG
Sbjct: 1 MKATWEKIEKNLGVLEVEVDADRVAAALDKAFNKVVKQVSVPGFRKGKVPRPIFEKRYGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ID ++ E + + + D P + I++ K +
Sbjct: 61 ESLYQDAIDFLLPEAYSQAVEQTDIFPVDSPDVEIDQ---------FAKGESFKFKAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++ + + ++V EV ++E+ +++ + + + V E ++ GD +D+
Sbjct: 112 VKPEVTLGDYKGVEVPVSKNEVSDEELAQELERLQQRHAELVVVDEDAAQSGDTAIIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + +GS + ++GL TGD K++E FPE++ DLAGK
Sbjct: 172 GSVDGVQFEGGQAEKYSLELGSNTFIPGFEDQVIGLHTGDSKDVEVTFPENYHSADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + E+ + ++++ A F++ + + +++ + E + + +
Sbjct: 232 QAVFKVKVHELKRKVLPELDDEFAKDVSEFDTLAEFKEDLKKQLLERKENEAKAAREGAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
++ ++ T D+PE++V++E +++ + S + E+ +
Sbjct: 292 VEKVAENATIDIPEAMVKSEVQNMVRDFDNRLRSQGMNLEMFLGFSGQSKEDLEEQMKAD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV +VL + + NIEV+E E+ L + +++ + + A L+
Sbjct: 352 AEKRVRNNLVLEQVAKAENIEVSEAEINEELQNMADTYKRSVEEIRSILESN-GSFANLK 410
Query: 414 APIFEDKVIDHILKSVQ 430
I K I ++++ +
Sbjct: 411 EEISLRKTIALLVENSK 427
>gi|229828305|ref|ZP_04454374.1| hypothetical protein GCWU000342_00363 [Shuttleworthia satelles DSM
14600]
gi|229792899|gb|EEP29013.1| hypothetical protein GCWU000342_00363 [Shuttleworthia satelles DSM
14600]
Length = 465
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 70/435 (16%), Positives = 178/435 (40%), Gaps = 17/435 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L V + + L + + + ++ GFR GKVP ++ +YG
Sbjct: 24 MSVKVENLEKNMAKLTVEVDAAELEKALERAYQKQKKSISVPGFRKGKVPRQLVEKMYGP 83
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++++ + P + A +P I I + +E +
Sbjct: 84 QVFYDDAANDLLSKEYPRAYDECGLEIASQPKINIEQ---------LEKGKNFIFTAEVA 134
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+++++ + ++VT+ +V + E++ ++ N + E GD +++
Sbjct: 135 VKPEVKLADYKGIEVTKIDTDVTDDEVNTEIDLERNKNSRTVTVDRAIEKGDTANINFEG 194
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD + +N +GS + L+G + GD+ E+ FPE++ K LAGK
Sbjct: 195 FVDGQAFDGGKGENYDLKIGSGSFIDNFEDQLIGHRAGDELEVNVTFPENYQEKSLAGKA 254
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ EV + ++++ A F+S + +K+++ + ++ + + +
Sbjct: 255 ASFKVKVNEVKTTELPDLDDEFAQDVSEFDSLDEYKADVRKKLEERKKEQAKRTQQDEAV 314
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLA 354
++ ++P+ +V+ + + ++ + M+ Q Q + + A
Sbjct: 315 AKLAEASEMEIPDPMVDFQLDQMMNEFSQNMAQQGLSMQQYLQFTGMNMAQFREQARPDA 374
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
R+ + +VL + + + ++E+++ L + + K+ + + ++
Sbjct: 375 LSRIQSSLVLEALAKAEGLVASDEDVEEELKKMADSYKMELDKVKELV--DESQRENMKK 432
Query: 415 PIFEDKVIDHILKSV 429
+ K +D I +V
Sbjct: 433 DLAIQKAVDLIYDNV 447
>gi|254455488|ref|ZP_05068917.1| trigger factor [Candidatus Pelagibacter sp. HTCC7211]
gi|207082490|gb|EDZ59916.1| trigger factor [Candidatus Pelagibacter sp. HTCC7211]
Length = 477
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 127/463 (27%), Positives = 240/463 (51%), Gaps = 24/463 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + +GL +++ V+I + +E+ E+I+S N+KGFRPGKVP +K +GK
Sbjct: 1 MKVTIENIKGLNKDVKVLIDKETMNSHMDEKYEEIKSTVNLKGFRPGKVPKEVLKRQFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E +D+++K+ + L + + A +P + + D +L+ +S
Sbjct: 61 AVFGEVLDKVLKDTSAKALEENKIKPAGQPKLDLKTYGED---------KELEYVMSVTE 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP++E S + ++ + ++D+ E D+++ EIAKN +F+ ET+++ GD VT+DY
Sbjct: 112 LPKVETKSLESIKFDEYSVKIDDSETDKRIKEIAKNQPSFKEASPETKAKEGDLVTLDYN 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + KN Q +G + L+G K D+K +E PE+ K+L K
Sbjct: 172 ATIDGKEFKGSEGKNTQLTLGKDLFLKGFDKQLIGAKKDDEKIVEATLPENFPEKELVNK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
K + I V +P V +N+D A LG + + ++ L S++I + + Q K QIL
Sbjct: 232 KAKFVCKILNVKNPEDVKINDDFAKNLGAKDLNDLKTLISKQINDEYKNSLDQLAKNQIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
I ++PE+L+E E + Q + + + N + AK R+
Sbjct: 292 KEIEKIKIDEIPENLIEGEIKILSQGMSEDEAKKN-------------KAKFTETAKTRI 338
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
TG++L GE+N I+V+E+E+Q+ + +QL PG EK ++D +QK P+A+A LR ++E
Sbjct: 339 KTGLILNEFGEQNKIQVSEQEIQAEVQKQLRMMPGQEKMVMDFYQKNPSAVASLRGTVYE 398
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVE 461
+K+++ I + + ++++ + E+ + ++
Sbjct: 399 EKILNLIKEKAKPNKKEISKAEAEKILKEAHNHDHNHDTEAMD 441
>gi|308232138|ref|ZP_07415069.2| trigger factor protein tig [Mycobacterium tuberculosis SUMu001]
gi|308369724|ref|ZP_07418842.2| trigger factor protein tig [Mycobacterium tuberculosis SUMu002]
gi|308371020|ref|ZP_07423579.2| trigger factor protein tig [Mycobacterium tuberculosis SUMu003]
gi|308372239|ref|ZP_07427938.2| trigger factor protein tig [Mycobacterium tuberculosis SUMu004]
gi|308373418|ref|ZP_07432245.2| trigger factor protein tig [Mycobacterium tuberculosis SUMu005]
gi|308374585|ref|ZP_07436639.2| trigger factor protein tig [Mycobacterium tuberculosis SUMu006]
gi|308380373|ref|ZP_07489718.2| trigger factor protein tig [Mycobacterium tuberculosis SUMu011]
gi|308214892|gb|EFO74291.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu001]
gi|308326653|gb|EFP15504.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu002]
gi|308330079|gb|EFP18930.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu003]
gi|308333919|gb|EFP22770.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu004]
gi|308337722|gb|EFP26573.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu005]
gi|308341403|gb|EFP30254.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu006]
gi|308361715|gb|EFP50566.1| trigger factor protein tig [Mycobacterium tuberculosis SUMu011]
Length = 459
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 69/442 (15%), Positives = 184/442 (41%), Gaps = 23/442 (5%)
Query: 12 KRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL-SETIDEI 70
+ ++V +P L F +++ + + GFRPGK P +++ G+ + + +++
Sbjct: 5 RVRINVEVPFAELEPDFQRAYKELAKQVRLPGFRPGKAPAKLLEARIGREAMLDQIVNDA 64
Query: 71 IKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFD 130
+ + +++ D + RP+I + + E DL+ DI P+I
Sbjct: 65 LPSRYGQAVAESDVQPLGRPNIEVTKK---------EYGQDLQFTAEVDIRPKISPPDLS 115
Query: 131 DLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQS 190
L V+ D E+ E ++D ++ + + +GD V++D + +VD + + +
Sbjct: 116 ALTVSVDPIEIGEDDVDAELQSLRTRFGTLTAVDRPVAVGDVVSIDLSATVDGEDIPNAA 175
Query: 191 KKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVF 250
+ + VGS L + + +VGL + + + AG++ ++ +++ V
Sbjct: 176 AEGLSHEVGSGRLIAGLDDAVVGLSADESRVFTAKLAAG----EHAGQEAQVTVTVRSVK 231
Query: 251 SPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDV 309
+++ A F+S +R S +++Q ++++ +D + + +
Sbjct: 232 ERELPEPDDEFAQLASEFDSIDELRASLSDQVRQAKRAQQAEQIRNATIDALLEQVDVPL 291
Query: 310 PESLVENEYNGILQK----VRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLG 365
PES V+ +++ +L + + + N+ S +++ V ++L
Sbjct: 292 PESYVQAQFDSVLHSALSGLNHDEARFNELLVEQGSSRAAFDAEARTASEKDVKRQLLLD 351
Query: 366 TIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHI 425
+ ++ ++V ++++ L ++ +++ + + N L + A + + I
Sbjct: 352 ALADELQVQVGQDDLTERLVTTSRQYGIEPQQLF-GYLQERNQLPTMFADVRRELAIRAA 410
Query: 426 LKSVQIVDR---KVTFDQLFDN 444
+++ + D + + F
Sbjct: 411 VEAATVTDSDGNTIDTSEFFGK 432
>gi|239931286|ref|ZP_04688239.1| trigger factor [Streptomyces ghanaensis ATCC 14672]
gi|291439659|ref|ZP_06579049.1| trigger factor [Streptomyces ghanaensis ATCC 14672]
gi|291342554|gb|EFE69510.1| trigger factor [Streptomyces ghanaensis ATCC 14672]
Length = 462
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 83/441 (18%), Positives = 181/441 (41%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GKVP I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKVPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + + +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTDAVNEAELSPLGQPEVDITE---------LKDGETLNFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P IEI + ++V D EV ++++++ + ++ + + E +E GD VT+D
Sbjct: 112 IRPTIEIPDYSGIEVEVDAIEVTDEDVEKSVEQLRERFASTSPVERAAEDGDVVTIDLQA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED +V + +GS +L + + GL G++ F + AGK+
Sbjct: 172 KVDGEVLEDGVASDVSYTIGSGELLDGIDDAVKGLSAGEE----ATFTSELKGGSAAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V ++++ A F++ +R ++++ E+ + + ++L
Sbjct: 228 AEVTVKVTQVAKRELPELDDEFAQLASEFDTLEELRADSRKRLRDMKEYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
+ + VPE L+E+E N + ++ + EE
Sbjct: 288 EKLLELVEVPVPEKLLEDEVNTRKHNLEHHQLGQMGLTLDKYLEIQGKTVEEFETETREA 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + ++ V +EE+ L ++ + + + L
Sbjct: 348 AIKGIKTQFVLDELVKQEKHNVNQEELTEHLMRRAASSGMSPDQFAQAVVE-GGQVPLLV 406
Query: 414 APIFEDKVIDHILKSVQIVDR 434
+ K + +++ + D
Sbjct: 407 GEVARGKALAAVVEKATVKDT 427
>gi|238650827|ref|YP_002916682.1| trigger factor [Rickettsia peacockii str. Rustic]
gi|259533648|sp|C4K233|TIG_RICPU RecName: Full=Trigger factor; Short=TF
gi|238624925|gb|ACR47631.1| trigger factor [Rickettsia peacockii str. Rustic]
Length = 445
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 118/452 (26%), Positives = 215/452 (47%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +EGL + P + + D + + D+ K I GFR GKVP+S +K YG
Sbjct: 1 MGITVLKNEGLDFHARISTPLSEIDDDIQKELLDLTKKVKIAGFRAGKVPVSIVKKKYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ ++ I+ I V ++ + + RP I + ESD L+ + ++
Sbjct: 61 SVRNDIIERRINHSVNHVIKEHNLNIIGRPKIEELQNESD---------KALEFTVKIEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP+I I + + + EV+ K+++ Q+ ++A + + + + + GD+VT+D
Sbjct: 112 LPKITIPDLKKISLDRPKLEVNSKDVEEQLEKLAALTKNYTKESKAKIKDGDQVTIDAIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ ED + + I+GS L + L+G KTG + ++ FPE++ KDLAGK
Sbjct: 172 YIKEKAFEDGKLNDFKVIIGSNALIPGFEKQLIGSKTGSEVDVNVTFPENYHAKDLAGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
R IK V + P V++++ A + S +R +++I+ SE + +K + D
Sbjct: 232 ARFVVQIKAVHTAEPTVIDDEFAKKFQSNSLEELRTHFTKQIENESEEAINTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL+E E N + + +E YY+ LA RRV
Sbjct: 292 KLEKLLDFDVPESLLEQEKNILKSGTDKNEQDESLLKD---KSSKEITAYYNKLALRRVR 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++++ + QQ FPG E + D ++ P A+ L+ P ED
Sbjct: 349 IGLLLAEYAKSKNLQLEPDDLRKVIMQQARNFPGQENMIFDFYKNNPRAIEGLKGPALED 408
Query: 420 KVIDHILKS-VQIVDRKVTFDQLFDNSSESSP 450
K + +I +++ ++K T ++L
Sbjct: 409 KAVQYIFNHEIKLKEKKYTKEELEKYLEAEEQ 440
>gi|119713092|gb|ABL97161.1| trigger factor [uncultured marine bacterium EB0_49D07]
Length = 433
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 93/447 (20%), Positives = 197/447 (44%), Gaps = 17/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K + L+R+L V +P ++ ++ I+S A + GFR G VP +K YG
Sbjct: 1 MASKLKKLKDLERKLTVSVPVEDYDSKYSTKLAKIKSSAKLDGFRKGNVPDDVLKQRYGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI E ++E+I+E P+ L ++ + A P+I I + + + + +++
Sbjct: 61 SIHYEVLNELIQESYPKELQAQELKPASSPAIDILDE---------DASKPISYSAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P ++ + +D+ +ID + +I++ ++ E ++ D+V +D+
Sbjct: 112 FPDVKPKLSRWTSYEKTEITLDDADIDLAIDDISERYCNWDKVERAAQEKDQVIIDFEGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E K+ + I+GS + + L+ GD + FPED+ KDLA K+
Sbjct: 172 IDGESFEGNESKDFKLILGSKSMIPGFEDNLMNKSAGDTFSFKTNFPEDYFKKDLANKET 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ EV ++ +L G E E R +++K E + K +
Sbjct: 232 EFFITLHEVQEMHKAKIDKELFDTLAMEGIEDEVGFRDEILKRMKGEIEQQEKSLTKESL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + F VP+S V+ + N + + M + + + D + + A++R
Sbjct: 292 YETLLKSNDFKVPQSTVDEQVNLMRKDSLMRMGQTPETADD----DLFPPEDFKENAEKR 347
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V ++ + +K +EV EE++ + ++ G++ ++ Q P L + + I
Sbjct: 348 VRLDLLFSALLKKYALEVQEEDINKFIEEEAGKYK-DAEQFKTWIQSQPQQLDQYKMVIL 406
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDN 444
E+ +I+ + ++ + + F +L +
Sbjct: 407 ENLLIEKLESDLKSKIKVIKFSELANK 433
>gi|89256248|ref|YP_513610.1| trigger factor [Francisella tularensis subsp. holarctica LVS]
gi|167010855|ref|ZP_02275786.1| trigger factor [Francisella tularensis subsp. holarctica FSC200]
gi|119370900|sp|Q2A3U2|TIG_FRATH RecName: Full=Trigger factor; Short=TF
gi|89144079|emb|CAJ79330.1| trigger factor (TF) protein (peptidyl-prolyl cis/trans isomerase)
[Francisella tularensis subsp. holarctica LVS]
Length = 438
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 99/451 (21%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + ++ I + GFRPGKVP +K YG+
Sbjct: 1 MQVTLEKKEGIHCSLLIEVPANEIDSVVSKEINRTAKTIKMDGFRPGKVPAGMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F E DKVT+D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIDNLRKQFATFSEVYKVVEKDDKVTIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + ++ I+GS + + ++G+K G+QK I FP+D+ KDLAG +
Sbjct: 171 KDGEAFEGGTANDIDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAGAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGVKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E + Q + +M A N + + AK++V
Sbjct: 291 GLREIAKFETPKSLIKREIDAAKQNLLKQMGGAKGFDVN-----QLPDNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K + +K +A L+A + E+
Sbjct: 346 TSLILDSIMNSQEFKAEEAEVESLLDELVQAY-EEPEKTKEQIKKNDKEIANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|88855137|ref|ZP_01129802.1| trigger factor [marine actinobacterium PHSC20C1]
gi|88815665|gb|EAR25522.1| trigger factor [marine actinobacterium PHSC20C1]
Length = 443
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 87/466 (18%), Positives = 190/466 (40%), Gaps = 27/466 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L++ + L S + I S+ NI GFR GKVP + G+
Sbjct: 1 MKTTVEKLSPTRVKLNISVTPEELKPSIDHAYSHIASQVNIPGFRKGKVPPQLVDQRVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL+ + + + + +++ + R RP I + + + DL L + D
Sbjct: 61 EEILNHAVSDSLDGFYRQAVTEEEIRVLGRPEADIVTW-----PEVKDFSGDLVLAIEVD 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ ++ +D L +T D E ++ ++ + E ++ GD +D
Sbjct: 116 VRPEFDLPDYDKLTLTVDAVEASADDVKDELDNLRARFGTLVTVERPAKKGDFAQLDLVA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + ++ S ++ + +GS +L E L L G+ E D G+
Sbjct: 176 KIGDTEVD--SASSISYELGSGELIEGIDEALDSLSAGESTTFESVLL----GGDNEGET 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++ V ++D A + F++ ++ +++K+ F + + QI+
Sbjct: 230 AVISLTLLTVKERELPEADDDFAQMASEFDTIKELKADLKEQVKRSKAFGQGAEARDQIV 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + VPE LVE+E + L+ D+E + +++
Sbjct: 290 DELLKTLEIPVPEKLVEDEVHRHLENENR-------------LEDDEHRAEVVVASEKTF 336
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ I+L +I EK I+V++EE+ S L Q ++ + + K + + A +
Sbjct: 337 RSQILLDSIVEKEEIKVSQEELTSYLVQGAQQYGMEPGEFIQVLDKN-GQIPAMVAEVAR 395
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQ 464
K + +L ++VD K + ++ ++ + + D ++ E
Sbjct: 396 SKALAVVLSKAKVVDSKGKSVDVSAFTAVANADVVEDDAAVEEAAD 441
>gi|328676002|gb|AEB28677.1| Cell division trigger factor [Francisella cf. novicida 3523]
Length = 438
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 99/451 (21%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + ++ I + GFRPGKVP S +K YG+
Sbjct: 1 MQVTVEKKEGIHCSLLIEVPANEIDSVVSKEINRTAKTIKMDGFRPGKVPASMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFIANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F + E DKVT+D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQFATFSEVDKVVEKDDKVTIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + + I+GS + + ++G+K G+QK I FP+D+ KDLAG +
Sbjct: 171 KDGEAFEGGTANDTDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAGAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGIKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E Q + +M A + + + AK++V
Sbjct: 291 GLREIAEFETPKSLIKREIEAAKQNLLKQMGGAKGFD-----VSQLPDNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K + +K +A L+A + E+
Sbjct: 346 TSLILDSIMNSQEFKAEEAEVESLLNELVQAY-EEPEKTKEQIKKNDKEMANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|254373014|ref|ZP_04988503.1| trigger factor [Francisella tularensis subsp. novicida GA99-3549]
gi|151570741|gb|EDN36395.1| trigger factor [Francisella novicida GA99-3549]
Length = 438
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 97/451 (21%), Positives = 208/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + ++ I + GFRPGKVP +K YG+
Sbjct: 1 MQVTVEKKEGIHCSLLIEVPANEVDSVVSKEINRTAKTIKMDGFRPGKVPAGMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F + E DKVT+D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQFATFSEVDKVVEKDDKVTIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + + I+GS + + ++G+K G+QK I FP+D+ KDLAG +
Sbjct: 171 KDGEAFEGGTANDTDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAGAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGVKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E Q + +M A + + + A+++V
Sbjct: 291 GLREIAEFETPKSLIKREIEAAKQNLLKQMGGAKGFD-----VSQLPDNLFEANARQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K + +K +A L+A + E+
Sbjct: 346 TSLILDSIMNSQEFKAEEAEVESLLDELVQAY-EEPEKTKEQIKKNDKEMANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|78044834|ref|YP_359187.1| trigger factor [Carboxydothermus hydrogenoformans Z-2901]
gi|119370886|sp|Q3AF97|TIG_CARHZ RecName: Full=Trigger factor; Short=TF
gi|77996949|gb|ABB15848.1| trigger factor [Carboxydothermus hydrogenoformans Z-2901]
Length = 427
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 100/437 (22%), Positives = 202/437 (46%), Gaps = 19/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ E + EL + + + ++ ++ + + I K I GFR GK P ++ GK
Sbjct: 1 MKVTKETLEKSRVELTIEVEAEEVSKAYEKAYKKIAQKVVIPGFRKGKAPRVLVERHVGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E +DE++ E + +++ +P +++ L + D
Sbjct: 61 EYILEEALDELLPESYVKAVNEAGIEPVDKPEVSLVSYGV---------NEPLVYKAVVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++E+ + L+VT+ EV ++E+++++ + V++ E++ GD V +D+
Sbjct: 112 VKPEVELGQYTGLEVTKMPVEVTDEEVEKELEYLQNRYAKLITVEDGEAKFGDIVVIDFA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++ LE S N + +GS E +VG+K G+ KEI FPED+ +DLAGK
Sbjct: 172 GKMNGEPLEGGSADNYRLELGSKVFIPGFEEQIVGMKPGETKEINVTFPEDYQKEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KE+ ++++ A F + + ++ +KI Q E + R+K++ ++
Sbjct: 232 PAVFTVTLKEIKRKELAPLDDEFAKDVSEFSTLAELKEDLKKKIAQTKENISREKMEAEV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHML 353
++ + ++P S+V +E IL E+ Q +E +
Sbjct: 292 VEKAVDNANVEIPASMVNHEVEHILHHFEEELKYRRLTLEQYLNYQKKTLDELKEELKPR 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+R V T +VL I +K I T+EE+ L + + +++ F + +L
Sbjct: 352 AERNVKTELVLEAIAKKEGITATDEEIDKELGKIAELYQQPVEEIKKLF---AQRMDDLA 408
Query: 414 APIFEDKVIDHILKSVQ 430
I K ID ++++ +
Sbjct: 409 YSIVRRKTIDFLVENAK 425
>gi|167627758|ref|YP_001678258.1| trigger factor [Francisella philomiragia subsp. philomiragia ATCC
25017]
gi|189035938|sp|B0TZA4|TIG_FRAP2 RecName: Full=Trigger factor; Short=TF
gi|167597759|gb|ABZ87757.1| trigger factor (TF) protein (peptidyl-prolyl cis/trans isomerase)
[Francisella philomiragia subsp. philomiragia ATCC
25017]
Length = 438
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 92/451 (20%), Positives = 207/451 (45%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + + I + GFRPGKVP ++ YG+
Sbjct: 1 MQVTVEKKEGIHCSLLIEVPANEVDSIVTKEINKTAKTIKMDGFRPGKVPAGMVEKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKKGEPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F E + DKV +D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQLATFSEVERAVQKDDKVVIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D + E S + + ++GS + + ++G+ +Q+ I FPED+ KDLAGK+
Sbjct: 171 RDGEVFEGGSANDQELVIGSGQMIPGFEDGIIGMNKDEQRTITVTFPEDYQNKDLAGKEA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ V+++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQEAQLPEVDDEFVAKFGVKGGVDTFEDEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P++L++ E + Q + +M N + + AK++V
Sbjct: 291 GLREIAEFETPKALIKREIDAAKQNLVKQMGGGQNFDVN-----QLPDNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I E + + E++S L + + + +K + +K ++ L+ + E+
Sbjct: 346 TSLILDSIIESQKFQAEDAEVESLLDELVQAY-EEPEKTKEQIKKNDREISNLKGLVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L Q+ +++ F ++ + ++
Sbjct: 405 KLTDWVLSQAQVTEKQEDFFEVIKENMQAQQ 435
>gi|83589391|ref|YP_429400.1| trigger factor [Moorella thermoacetica ATCC 39073]
gi|119370906|sp|Q2RL32|TIG_MOOTA RecName: Full=Trigger factor; Short=TF
gi|83572305|gb|ABC18857.1| trigger factor [Moorella thermoacetica ATCC 39073]
Length = 446
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 84/437 (19%), Positives = 192/437 (43%), Gaps = 20/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + L+V + + R+ + ++ + + NI GFR GK P ++ GK
Sbjct: 1 MKAAVEKLDKNQVLLEVEVEAPRVQKAIDQAYRRLVKQVNIPGFRKGKAPRFILEQYIGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I +E + +I E +++ RP + I + +E L + +
Sbjct: 61 EPIYNEAAEIVIPPAYEEAVAEHQLEPIDRPEVEIVK---------VEDGEPLVFKARVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++++ + L+V + EV E +ID + + + E +++ + GD VT+D+
Sbjct: 112 VKPEVQLGPYTGLEVERQEVEVTEADIDAYLKRLQERYAELEVIEDEPAAAGDIVTIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD N +GS + E LVG + +++ + FP D+ KDLAGK
Sbjct: 172 GTVDGQPYPGMEGNNYPLELGSGTFITGFEEQLVGARVNEERTVNVTFPSDYHEKDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +++ + ++++ A E+ + +R +++++ + V V++ +
Sbjct: 232 EAVFQVTVRGIKRKKLAPLDDEFAKDVSECETLADLRQDIRRRLEESQKQRVEAAVRQAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE----EDLQYYHML 353
++ T ++PE +VE + ++++ + + + + + + +
Sbjct: 292 VEKAVAAATVELPEVMVERRIDARIRELERNLQAQKMTLEEFLKNTDKTIGDLEKEFRPG 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+R V T +VL I + NI+ ++EE+ + + + F + K L+ L+
Sbjct: 352 AERDVKTELVLEAIAKAENIQPSQEEIDAEIERMARIFRQDPDTVR----KNLGDLSVLK 407
Query: 414 APIFEDKVIDHILKSVQ 430
I K ID +++ +
Sbjct: 408 YDIMIKKTIDFLVEHSK 424
>gi|296270442|ref|YP_003653074.1| trigger factor [Thermobispora bispora DSM 43833]
gi|296093229|gb|ADG89181.1| trigger factor [Thermobispora bispora DSM 43833]
Length = 463
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 81/476 (17%), Positives = 197/476 (41%), Gaps = 20/476 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P L S + + + + GFRPGKVP I+ +G+
Sbjct: 1 MKTAVEELSPTRVKLTVEVPFQELESSLQAAYKKVAKQVRVPGFRPGKVPARIIEQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ +L ET+++ I ++ + + ++D +P I + + IE ++ D
Sbjct: 61 AVVLEETLNDAIPKLYSKAVDEQDLFPVSQPQIEVTK---------IEDGEQVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P E+ F+ +V +V ++++D Q+ + + + ++ GD V +D
Sbjct: 112 VRPAFEVPDFEGTEVVVSSAKVTDEDVDAQLDALRQRFATLTGVDRPAKDGDYVVMDMRA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++ L++Q +V + VG+ + + L G+ G++K + AG++
Sbjct: 172 EINGENLDEQQASDVSYEVGAGSILQGLDDALRGMSAGEEKTFRTTLV----GGEHAGQE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +K V + ++++ A F++ ++ +++++ ++ + + L
Sbjct: 228 ADVIVKVKSVKEKVLPELDDEFAQLSSEFDTLDELKESIRAQVRRNKLIEQVRQAREKAL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN----VDSIDEEDLQYYHMLA 354
D + K +PES ++ E Q + +++ + + + +EE L A
Sbjct: 288 DALLEKIDIPLPESALKVEIEARKQYLDQQIAQSGLSREAFFRLYQTTEEERLAEIEKTA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
R + G VL I + + V+E+E+ + +Q + + N L
Sbjct: 348 ARALKAGFVLDKIVKSEELGVSEQELTDFVVRQAMQMGVAPNTLAKQL-ADTNQLTLAMM 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
I +K + + ++ D L +E +P++ + + + + ++
Sbjct: 407 EIAREKAKTLLGDAAKVKDEDGNDVDLKAIYAELNPQQEQAEGEQDKEDKDDKGSE 462
>gi|157964991|ref|YP_001499815.1| trigger factor [Rickettsia massiliae MTU5]
gi|157844767|gb|ABV85268.1| Trigger factor [Rickettsia massiliae MTU5]
Length = 448
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 118/452 (26%), Positives = 216/452 (47%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +EGL + P + + D + + D+ K I GFR GKVP+S +K YG
Sbjct: 4 MGITVLKNEGLDFHARISTPLSEIDDDIQKELLDLTKKVKIAGFRAGKVPVSIVKKKYGT 63
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ ++ I+ I V ++ + + RP I + ESD L+ + ++
Sbjct: 64 SVRNDIIERKINHSVNHVIKEHNLNIIGRPKIEELQNESD---------KALEFTVKIEL 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP+I I F + + + EV+ K+++ Q+ ++A + + + + + GD+VT+D
Sbjct: 115 LPKITIPDFKKISLDRPKLEVNSKDVEEQLEKLAALTKNYTKESKAKIKAGDQVTIDAIG 174
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ +D + + I+GS L + L+G KTG + ++ FPE++ KDLAGK
Sbjct: 175 YIKEKAFKDGKLNDFKVIIGSNALIPGFEKQLIGSKTGSEIDVNVTFPENYHAKDLAGKD 234
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
R IK V + P V++++ A + S +R +++I+ SE + +K + D
Sbjct: 235 ARFVVQIKAVHTAEPTVIDDEFAKKFQSNSLEELRTHFTKQIENESEEAINTIMKMNLFD 294
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL+E E N + + +E YY+ LA RRV
Sbjct: 295 KLEKLLDFDVPESLLEQEKNILKSGTDKNEQDESLLKD---KSSKEITAYYNKLALRRVR 351
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++++ + QQ FPG E + D ++ P A+ L+ P ED
Sbjct: 352 IGLLLAEYAKSKNLQLEPDDLRKVIMQQARNFPGQENMIFDFYKNNPRAIEGLKGPALED 411
Query: 420 KVIDHILKS-VQIVDRKVTFDQLFDNSSESSP 450
K + +I +++ ++K T ++L
Sbjct: 412 KAVQYIFNHEIKLKEKKYTKEELEKYLEAEEQ 443
>gi|254369238|ref|ZP_04985250.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica
FSC022]
gi|157122188|gb|EDO66328.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica
FSC022]
Length = 438
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 98/451 (21%), Positives = 208/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + ++ I + GFRPGKVP +K YG+
Sbjct: 1 MQVTVEKKEGIHCSLLIEVPANEIDSVVSKEINRTAKTIKMDGFRPGKVPAGMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F E DKV +D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQFATFSEVYKVVEKDDKVMIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + ++ I+GS + + ++G+K G+QK I FP+D+ KDLAG +
Sbjct: 171 KDGEAFEGGTANDIDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAGAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGVKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E + Q + +M A N + + AK++V
Sbjct: 291 GLREIAKFETPKSLIKREIDAAKQNLLKQMGGAKGFDVN-----QLPDNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K + +K +A L+A + E+
Sbjct: 346 TSLILDSIMNSQEFKAEEAEVESLLDELVQAY-EEPEKTKEQIKKNDKEIANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|126436161|ref|YP_001071852.1| trigger factor [Mycobacterium sp. JLS]
gi|166229904|sp|A3Q2I4|TIG_MYCSJ RecName: Full=Trigger factor; Short=TF
gi|126235961|gb|ABN99361.1| trigger factor [Mycobacterium sp. JLS]
Length = 482
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 74/482 (15%), Positives = 197/482 (40%), Gaps = 25/482 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F+ +++ + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEKLSPTRVRINVEVPFTELEPDFDRAFKELAKQVRLPGFRPGKAPRKLLEARVGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + E + E ++ D + +P I I + E DL D
Sbjct: 61 EAMLDQVVGEAVPGRYTEAVTSSDVQPLGQPEIEITKK---------EYGEDLVFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + L++T D E+ ++E+D ++ + + ++ GD V++D +
Sbjct: 112 VRPEITLPDLSALEITVDPIEITDEEVDTELQSLRARFGTLTGVDRPAKDGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + + VGS L + +VGL G+ KE + AGK+
Sbjct: 172 TVDGKDVPEATTEGLSHEVGSGQLIEGLDDAIVGLSEGESKEFTTTLAAG----EHAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K + +++ A F++ ++ ++++++ ++++ + L
Sbjct: 228 AVVTVTVKSIKERELPEPDDEFAQLASEFDTIDELKESLTEQVRRVKRVQQAEQIRDKAL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY----HMLA 354
+ + + +PE +V+ + + + + + + + + A
Sbjct: 288 ELLLEQTEVPLPEKIVQAQIDDTVHNAIHGLDHDEDRFAEQLAEQGSSREEFDANTRTEA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V T +++ + ++ ++V + ++ L ++ +++L + N L + A
Sbjct: 348 EKAVKTQLLMDALADQLEVQVGQGDLTERLVLMSRQYGLEPQQLLQI-LQQNNQLPAMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNS--SESSPEKLLDKSSKVETFQSEEAP 469
+ I ++ + D + + F S +++ E + + + EA
Sbjct: 407 DVRRGLTIAAVVHGATVKDTDGNDIDTTEFFGPSGGAQAEAEGADEADADSDADSDTEAD 466
Query: 470 SE 471
S+
Sbjct: 467 SD 468
>gi|288553620|ref|YP_003425555.1| trigger factor [Bacillus pseudofirmus OF4]
gi|288544780|gb|ADC48663.1| trigger factor [Bacillus pseudofirmus OF4]
Length = 430
Score = 201 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 186/438 (42%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L + + + ++ + + + + K N+ GFR GKVP S + +G
Sbjct: 1 MTAKWEKLEGNEGVLTIDVEAEKVDAALDAAFKKVAKKVNVPGFRKGKVPRSLFEKQFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E + + + RP I I E +L
Sbjct: 61 EALYQDALDILLPEAYAAAIDETNIEPVDRPEIDIETM---------EKGSNLVFTAKVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+ P++ + + L+V + V +++++ ++ ++ + V E E GD +D+
Sbjct: 112 VKPEVTLGEYKGLEVEEQDTTVTDEDVEAELTQLQNRHAELVVVEDGAIENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E L+GLK GD+K++E FPE++ +DLAGK
Sbjct: 172 GFVDGAAFEGGQAENYSLEIGSNQFIPGFEEQLIGLKAGDEKDVEVNFPEEYHAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ ++++ A E+ ++ K+++ E +++
Sbjct: 232 AATFKVKVHDIKRKELPALDDEFAKDANENVETLDELKKEIKDKLQKEKEQAADTEIRDT 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+++ + T D+PE++V E + +LQ+ + + +E + +
Sbjct: 292 LVEKAAENATVDIPEAMVTTETDRMLQEFEQRLQMQGMNLEMYYQFAGQDEEAMREQFKK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I NIE T+ ++ + L + + ++ L +
Sbjct: 352 DAEKRVRINLTLEAIANAENIEATDADVDAELEKMAEMYQRSVEE-LKTIFAAQGGTEGI 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ + K ++ ++++ +
Sbjct: 411 KGDLKIQKAVELLVENSK 428
>gi|261418331|ref|YP_003252013.1| trigger factor [Geobacillus sp. Y412MC61]
gi|297529183|ref|YP_003670458.1| trigger factor [Geobacillus sp. C56-T3]
gi|319767710|ref|YP_004133211.1| trigger factor [Geobacillus sp. Y412MC52]
gi|261374788|gb|ACX77531.1| trigger factor [Geobacillus sp. Y412MC61]
gi|297252435|gb|ADI25881.1| trigger factor [Geobacillus sp. C56-T3]
gi|317112576|gb|ADU95068.1| trigger factor [Geobacillus sp. Y412MC52]
Length = 428
Score = 201 bits (509), Expect = 3e-49, Method: Composition-based stats.
Identities = 81/439 (18%), Positives = 186/439 (42%), Gaps = 21/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + ++ + + + + GFR GKVP + +G
Sbjct: 1 MSVKWEKLEGNEGVLTVEVDAEKVNKGLDAAFKKVVKNITLPGFRKGKVPRVLFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E + + + P I I + E L +
Sbjct: 61 EALYQDALDILLPEAYAKAVEEAGIEPVSMPEIDIEQM---------EKGKSLIFKAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L+V + V +++++ ++ + ++ VKE + D V +D+
Sbjct: 112 VKPEVKLGQYKGLEVEKMDTTVTDEDVENELKRLQEDYAELVVKEDGTVENGDTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E LVG+K G++KEI+ FP+++ K LAGK
Sbjct: 172 GFVDGEPFEGGKAENYSLEIGSGTFIPGFEEQLVGMKAGEEKEIQVTFPDEYHAKQLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++ A E+ ++ ++++ + ++
Sbjct: 232 PATFKVQVHEVKAKQLPALDDEFAKDVDEEVETLDELKAKIRARLEEAKKNEAETALRNA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+++ + D+PE +++NE + +L++ + Q + +
Sbjct: 292 VVEKAAANAEMDIPEVMIKNETDRMLREFDQRLQMQGLNLQLYYQFSGQDEASLREQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I + NIEVT+EE+ L + + K+ + +L +
Sbjct: 352 DAEKRVRAALTLEAIAKAENIEVTDEEVNKELEKMAEAYKLSVDKLKELL----GSLDGV 407
Query: 413 RAPIFEDKVIDHILKSVQI 431
+ + K +D +++ ++
Sbjct: 408 KEDLKWRKTVDFLVEHSKV 426
>gi|115314705|ref|YP_763428.1| trigger factor [Francisella tularensis subsp. holarctica OSU18]
gi|156502309|ref|YP_001428374.1| trigger factor [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|290953589|ref|ZP_06558210.1| trigger factor [Francisella tularensis subsp. holarctica URFT1]
gi|295313090|ref|ZP_06803780.1| trigger factor [Francisella tularensis subsp. holarctica URFT1]
gi|122325272|sp|Q0BM93|TIG_FRATO RecName: Full=Trigger factor; Short=TF
gi|166229046|sp|A7NBR5|TIG_FRATF RecName: Full=Trigger factor; Short=TF
gi|115129604|gb|ABI82791.1| peptidylprolyl isomerase [Francisella tularensis subsp. holarctica
OSU18]
gi|156252912|gb|ABU61418.1| trigger factor/ribosome-associated molecular chaperone [Francisella
tularensis subsp. holarctica FTNF002-00]
Length = 438
Score = 200 bits (508), Expect = 3e-49, Method: Composition-based stats.
Identities = 99/451 (21%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + ++ I + GFRPGKVP +K YG+
Sbjct: 1 MQVTLEKKEGIHCSLLIEVPANEIDSVVSKEINRTAKTIKMDGFRPGKVPAGMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F E DKVT+D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQFATFSEVYKVVEKDDKVTIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + ++ I+GS + + ++G+K G+QK I FP+D+ KDLAG +
Sbjct: 171 KDGEAFEGGTANDIDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAGAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGVKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E + Q + +M A N + + AK++V
Sbjct: 291 GLREIAKFETPKSLIKREIDAAKQNLLKQMGGAKGFDVN-----QLPDNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K + +K +A L+A + E+
Sbjct: 346 TSLILDSIMNSQEFKAEEAEVESLLDELVQAY-EEPEKTKEQIKKNDKEIANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|15893229|ref|NP_360943.1| trigger factor [Rickettsia conorii str. Malish 7]
gi|21264075|sp|Q92G20|TIG_RICCN RecName: Full=Trigger factor; Short=TF
gi|15620446|gb|AAL03844.1| trigger factor [Rickettsia conorii str. Malish 7]
Length = 445
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 118/452 (26%), Positives = 215/452 (47%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +EGL + P + + D + + D+ K I GFR GKVP+S +K YG
Sbjct: 1 MGITILKNEGLDFHARISTPLSEIDDDIQKELLDLTKKVKIAGFRAGKVPVSIVKKKYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ ++ I+ I V ++ + + RP I + ESD L+ + ++
Sbjct: 61 SVRNDIIERRINNSVNHVIKEHNLNIIGRPKIEELQNESD---------KALEFTVKIEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP+I I + + + EV+ K+++ Q+ ++A + + + + + GD+VT+D
Sbjct: 112 LPKITIPDLKKISLDRPKLEVNSKDVEEQLEKLAALTKNYTKESKAKIKDGDQVTIDAIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ ED + + I+GS L + L+G KTG + ++ FPE++ KDLAGK
Sbjct: 172 YIKEKAFEDGKLNDFKVIIGSNALIPGFEKQLIGSKTGSKVDVNVTFPENYHAKDLAGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
R IK V + P V++++ A + S +R +++I+ SE + +K + D
Sbjct: 232 ARFVVQIKAVHTAEPTVIDDEFAKKFQSNSLEELRTHFTKQIENESEEAINTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL+E E N + + +E YY+ LA RRV
Sbjct: 292 KLEKLLDFDVPESLLEQEKNILKSGTDKNEQDESLLKD---KSSKEITAYYNKLALRRVR 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++++ + QQ FPG E + D ++ P A+ L+ P ED
Sbjct: 349 IGLLLAEYAKSKNLQLEPDDLRKVIMQQARNFPGQENMIFDFYKNNPRAIEGLKGPALED 408
Query: 420 KVIDHILKS-VQIVDRKVTFDQLFDNSSESSP 450
K + +I +++ ++K T ++L
Sbjct: 409 KAVQYIFNHEIKLKEKKYTKEELEKYLEAEEQ 440
>gi|271968526|ref|YP_003342722.1| trigger factor [Streptosporangium roseum DSM 43021]
gi|270511701|gb|ACZ89979.1| trigger factor [Streptosporangium roseum DSM 43021]
Length = 468
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 91/477 (19%), Positives = 202/477 (42%), Gaps = 20/477 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P L +S + + + + GFRPGKVP I+ +G+
Sbjct: 1 MKTAVEELSPTRVKLTVEVPFEELGESLQAAYKKVAQQVRVPGFRPGKVPARIIEQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ +L ET+++ + ++ + + D +P I + + IE ++ D
Sbjct: 61 AVVLEETLNDAVPKLYGQAVDASDIFPVSQPEIEVTK---------IEDGEQVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P ++ F L+VT + EV ++++D Q+ + + E + GD V +D
Sbjct: 112 IRPNFDVPDFQGLEVTVPVAEVSDEDVDGQLDGLRQRFATLTGVERAAANGDYVVMDLAA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D V +E+Q +V + VG+ + + LVG+ GD KE + AG++
Sbjct: 172 AIDGVNIEEQQANDVSYEVGAGSVLQGLDDALVGMSAGDTKEFTTSLV----GGENAGEE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +IK V + ++++ A F+S ++ ++ +++ + + L
Sbjct: 228 AVVTITIKSVKEKVLPELDDEFAQLASEFDSLDELKDSIREQARRNKLIDQVVQARENAL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN----VDSIDEEDLQYYHMLA 354
D + K +PES + E + + +++ + + + +EE + A
Sbjct: 288 DALLAKIDIPLPESAFKAEVDNRKHNLEHQIAESGLSKEAYFRLYQTTEEERYAEFDENA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + TG VL I + + V+E+E+ + + ++ + + H +
Sbjct: 348 AKALKTGFVLDKIVKAEELGVSEQELTNFVVRRAMQMNVAPNTLAQHLADNDQLTLAMV- 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I DK + + ++ D L +E + E+ ++ ++ S + P+E
Sbjct: 407 EIVRDKAKSVVGDAAKVTDEAGNEVDLKAIYTEINGEESAEEDAEESNENSADKPAE 463
>gi|108800545|ref|YP_640742.1| trigger factor [Mycobacterium sp. MCS]
gi|119869684|ref|YP_939636.1| trigger factor [Mycobacterium sp. KMS]
gi|123178421|sp|Q1B5Z8|TIG_MYCSS RecName: Full=Trigger factor; Short=TF
gi|166229905|sp|A1UJ38|TIG_MYCSK RecName: Full=Trigger factor; Short=TF
gi|108770964|gb|ABG09686.1| trigger factor [Mycobacterium sp. MCS]
gi|119695773|gb|ABL92846.1| trigger factor [Mycobacterium sp. KMS]
Length = 478
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 74/482 (15%), Positives = 197/482 (40%), Gaps = 25/482 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F+ +++ + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEKLSPTRVRINVEVPFTELEPDFDRAFKELAKQVRLPGFRPGKAPRKLLEARVGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + E + E ++ D + +P I I + E DL D
Sbjct: 61 EAMLDQVVGEAVPGRYTEAVTSSDVQPLGQPEIEITKK---------EYGEDLVFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + L++T D E+ ++E+D ++ + + ++ GD V++D +
Sbjct: 112 VRPEITLPDLSALEITVDPIEITDEEVDTELQSLRARFGTLTGVDRPAKDGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + + VGS L + +VGL G+ KE + AGK+
Sbjct: 172 TVDGKDVPEATTEGLSHEVGSGQLIEGLDDAIVGLSEGESKEFTTTLAAG----EHAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K + +++ A F++ ++ ++++++ ++++ + L
Sbjct: 228 AIVTVTVKSIKERELPEPDDEFAQLASEFDTIDELKESLTEQVRRVKRVQQAEQIRDKAL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY----HMLA 354
+ + + +PE +V+ + + + + + + + + A
Sbjct: 288 ELLLEQTEVPLPEKIVQAQIDDTVHNAIHGLDHDEDRFAEQLAEQGSSREEFDANTRTEA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V T +++ + ++ ++V + ++ L ++ +++L + N L + A
Sbjct: 348 EKAVKTQLLMDALADQLEVQVGQGDLTERLVLMSRQYGLEPQQLLQI-LQQNNQLPAMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNS--SESSPEKLLDKSSKVETFQSEEAP 469
+ I ++ + D + + F S +++ E + + + EA
Sbjct: 407 DVRRGLTIAAVVHGATVKDTDGNDIDTTEFFGPSGGAQAEAEGADEADADSDADSDTEAD 466
Query: 470 SE 471
S+
Sbjct: 467 SD 468
>gi|237785952|ref|YP_002906657.1| trigger factor [Corynebacterium kroppenstedtii DSM 44385]
gi|259533561|sp|C4LJV9|TIG_CORK4 RecName: Full=Trigger factor; Short=TF
gi|237758864|gb|ACR18114.1| trigger factor [Corynebacterium kroppenstedtii DSM 44385]
Length = 495
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 80/478 (16%), Positives = 200/478 (41%), Gaps = 22/478 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P + L ++ + + + GFR GKVP +++ G+
Sbjct: 1 MKSSVEQQSATRVKLTVEVPFDELQPEIDQAYRSLAQQVTLPGFRKGKVPPRVLEARLGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+IL + I+ ++ + + + D + +P+I I +E ++ D
Sbjct: 61 GAILDQAINNMLPSRYSQAVEEHDLKVLTQPTIDIT---------RLEDNELVEFTAEAD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I++ F ++V D D+ +D ++ + + E + D V++D +
Sbjct: 112 VRPEIDLPDFSTIEVEVDPLVADDAAVDAELDNLRARFGTLKAVERPVQKDDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+V +++ + + + VG+ +L + L G+K + K + + A
Sbjct: 172 TVGGEPVDEATTEGLSHQVGNGELIEGLDDALEGMKVDESKTFKSNLVAGDHEGEEAEVT 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
V + + LP ++ + F++ +R +++++++ + ++ ++L+
Sbjct: 232 VTVKSLKER---ELPEADDDFAQLASEFDTIGELRESLAKQVEENKKAEQASSIRDKVLE 288
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLAK 355
K F++PE++VE + G L ++ + + + + S E+ + A+
Sbjct: 289 KALEKTDFELPEAVVEEQVKGQLNQLLQQFNGDEKAFDQLLAAQGSSREQFDRDTRSSAE 348
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
V T + L T+ ++ EV+++E + R+ ++ + Q + + L A
Sbjct: 349 EAVRTQLFLDTLADELQPEVSQQEFTEHIMFTAQRYGMEPQQFMQAIQAS-DQIGALYAD 407
Query: 416 IFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ K + + +V + D ++ + F E++ E + + SE PS
Sbjct: 408 VRRGKALAESICTVSVKDTDGNEIDPKEYFGE-EENTDETSTGSADAEASENSEATPS 464
>gi|315645728|ref|ZP_07898852.1| hypothetical protein PVOR_09630 [Paenibacillus vortex V453]
gi|315279206|gb|EFU42516.1| hypothetical protein PVOR_09630 [Paenibacillus vortex V453]
Length = 442
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 85/436 (19%), Positives = 188/436 (43%), Gaps = 17/436 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + E LDV + ++R+ + ++ + KAN+ GFR GKVP ++ YG
Sbjct: 1 MKATWEKIEKNLGVLDVEVDADRVASALDKAFNKVAKKANVPGFRKGKVPRPIFEARYGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ID ++ E E + + D RP + I + K +
Sbjct: 61 ESLYQDAIDILLPEAYSEAVDQADIFPVDRPEVDIEQ---------FAKGETFKFKARVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + ++V EV E+E++ ++ + + + + E S GD V +D+
Sbjct: 112 VKPEVKLGDYKGVEVAAVAAEVSEEELNEELERLQQRHAELAVIDEGASVSGDIVVIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + +GS + ++G+ TGD K++E FPE++ +LA K
Sbjct: 172 GSVDGVPFEGGQAERYSLELGSNSFIPGFEDQVIGMATGDFKDVEVTFPENYHAAELANK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + E+ ++++ A F++ + +++ E + + +
Sbjct: 232 QAVFKVKVHEIKRKQLPELDDEFAKDVSEFDTLDEYKEDLKKQLLTRKEQEAQGVRENEA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
++ + ++P++++++E +++ + + ++
Sbjct: 292 VEKAAANAEIEIPDAMIQSEVQNMMRDFDNRLRQQGMNLEMFLSFSGQSSDDLEGQMKED 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV +VL I ++ +EVTEEE+ L + +++ +L LR
Sbjct: 352 AEKRVRNNLVLEQIAKEEKLEVTEEEINKELENMADTYKRSAEEIRSILGAN-GSLDSLR 410
Query: 414 APIFEDKVIDHILKSV 429
+ K ID +L++
Sbjct: 411 EELLLRKTIDFLLENS 426
>gi|329934559|ref|ZP_08284600.1| Cell division trigger factor [Streptomyces griseoaurantiacus M045]
gi|329305381|gb|EGG49237.1| Cell division trigger factor [Streptomyces griseoaurantiacus M045]
Length = 463
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 89/477 (18%), Positives = 194/477 (40%), Gaps = 21/477 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + + +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTDAVNEAELNPLGQPEVDIKE---------LKDNELLSFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P +EI + ++V D EV ++++D+ + E+ + + E +E GD VT+D
Sbjct: 112 IRPALEIPDYSGIEVEVDAIEVADEDVDKAVEELRERFASTSPVERAAEEGDVVTLDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED K+V + +GS +L E + G G++ F + AGK+
Sbjct: 172 KVDGEVLEDGVAKDVSYTIGSGELLDGIDEAVKGKSAGEE----ATFTSELKGGSAAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + ++++ A F++ +R +++ E+ + + ++L
Sbjct: 228 AEVTVKVSQVAARELPELDDEFAQLASEFDTLEELRADSRKRLVNMKEYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
D + VPE L+E+E N + ++ + + EE
Sbjct: 288 DKLLELVEVPVPEKLLEDEINTRKHNLEHHQLGQMGLTLDKYLELQEKTAEEFETETREA 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + K + V +EE+ L ++ + + + L
Sbjct: 348 AVKGIKTQFVLDELVNKEKLNVNQEELTEHLVRRAAGSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ K + ++++ + D L D+ + + + ++ + + S
Sbjct: 407 GEVARGKALAVVVEAATVKDTNGEVVDLSDDEDDDEAAEGAEAAADGDEKAEDSKES 463
>gi|56421188|ref|YP_148506.1| trigger factor [Geobacillus kaustophilus HTA426]
gi|67461629|sp|Q5KWJ8|TIG_GEOKA RecName: Full=Trigger factor; Short=TF
gi|56381030|dbj|BAD76938.1| trigger factor (prolyl isomerase) [Geobacillus kaustophilus HTA426]
Length = 428
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 81/439 (18%), Positives = 186/439 (42%), Gaps = 21/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + ++ + + + + GFR GKVP + +G
Sbjct: 1 MSVKWEKLEGNEGVLTVEVDAEKVNKGLDAAFKKVVKNITLPGFRKGKVPRVLFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E + + + P I I + E L +
Sbjct: 61 EALYQDALDILLPEAYAKAVEEAGIEPVSMPEIDIEQM---------EKGKSLIFKAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L+V + V +++++ ++ + ++ VKE + D V +D+
Sbjct: 112 VKPEVKLGQYKGLEVEKMDTTVTDEDVENELKRLQEDYAELVVKEDGTVENGDTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E LVG+K G++KEI+ FP+++ K LAGK
Sbjct: 172 GFVDGEPFEGGKAENYSLEIGSGTFIPGFEEQLVGMKAGEEKEIQVTFPDEYHAKQLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++ A E+ ++ ++++ + ++
Sbjct: 232 PATFKVKVHEVKAKQLPALDDEFAKDVDEEVETLDELKAKIRARLEEAKKNEAETALRNA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+++ + D+PE +++NE + +L++ + Q + +
Sbjct: 292 VVEKAAANAEMDIPEVMIKNETDRMLREFDQRLQMQGLNLQLYYQFSGQDEASLREQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I + NIEVT+EE+ L + + K+ + +L +
Sbjct: 352 DAEKRVRAALTLEAIAKAENIEVTDEEVNKELEKMAEAYKLSVDKLKELL----GSLDGV 407
Query: 413 RAPIFEDKVIDHILKSVQI 431
+ + K +D +++ ++
Sbjct: 408 KEDLKWRKTVDFLVEHSKV 426
>gi|172041061|ref|YP_001800775.1| trigger factor [Corynebacterium urealyticum DSM 7109]
gi|171852365|emb|CAQ05341.1| putative trigger factor [Corynebacterium urealyticum DSM 7109]
Length = 541
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 72/440 (16%), Positives = 189/440 (42%), Gaps = 20/440 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + ++ V +P + L F++ + + +I GFR GKVP I++ G+
Sbjct: 23 KSSVEKLSATRTKITVEVPFDELKPEFDKAYASLSQQVSIPGFRKGKVPAKIIETRLGRG 82
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L + I+E++ + + + D +A +P I I E ++ + D+
Sbjct: 83 VVLDQVINEMLPSRYSQAVEEHDVKALGQPEIDITE---------LKDGESVTFTAEVDV 133
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ F D+ V D + D++ ++ ++ + + + + + GD V++D + +
Sbjct: 134 RPEIEVPDFSDISVEVDAIKADDEAVEGELKNLQARFGTLKSVDRKVKKGDFVSIDLSAT 193
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD +++ + + + VG+ L + LVG+K G++ + A ++
Sbjct: 194 VDGETVDEATTEGLSHEVGNDSLIEGLDDALVGMKAGEESTFT----SKLVAGEHADEEA 249
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + V +++D A F++ ++ + ++++ + +++ ++L+
Sbjct: 250 EVTVKVDSVKERELPELDDDFAQLASEFDTLDELKDSLATQVEEQLKNGQAGQIRDKVLE 309
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAK 355
K +P+S+V+ + G +Q++ + + + + + E+ + A+
Sbjct: 310 AALEKVEVPLPQSVVDEQVQGQVQQLISQFGGDEKVFEQMLAAQDITREKFEEDAREAAE 369
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
V T + L + + EV++EE+ + ++ + + Q+ + L A
Sbjct: 370 GSVRTQLFLDALADVEQPEVSQEELMDHIGFTAAQYGMDPNQFIMQLQQ-AGQIGSLFAD 428
Query: 416 IFEDKVIDHILKSVQIVDRK 435
+ K + + + D +
Sbjct: 429 VRRGKALAINISKSSVKDSE 448
>gi|34581103|ref|ZP_00142583.1| trigger factor [Rickettsia sibirica 246]
gi|28262488|gb|EAA25992.1| trigger factor [Rickettsia sibirica 246]
Length = 445
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 119/452 (26%), Positives = 216/452 (47%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +EGL + P + + D + + D+ K I GFR GKVP+S +K YG
Sbjct: 1 MGITILKNEGLDFHARISTPLSEIDDDIQKELLDLTKKVKIAGFRAGKVPVSIVKKKYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ ++ I+ I V ++ + + RP I + ESD L+ + ++
Sbjct: 61 SVRNDIIERRINHSVNHVIKEHNLNIIGRPKIEELQNESD---------KALEFTVKIEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP+I I + + + EV+ K+++ Q+ ++A + + + + + GD+VT+D
Sbjct: 112 LPKITIPDLKKISLDRPKLEVNSKDVEEQLEKLAALTKNYTKESKAKIKDGDQVTIDAIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ ED + + I+GS L + L+G KTG + ++ FPE++ KDLAGK
Sbjct: 172 YIKEKAFEDGKLNDFKVIIGSNALIPGFEKQLIGSKTGSEVDVNVTFPENYHAKDLAGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
R IK V + P V++++ A + S +R +++I+ SE + +K + D
Sbjct: 232 ARFVVQIKAVHTAEPTVIDDEFAKKFQSNSLEELRTHFTKQIENESEEAINTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL+E E N + + +E YY+ LA RRV
Sbjct: 292 KLEKLLDFDVPESLLEQEKNILKSGTDKNEQDESLLKD---KSSKEITAYYNKLALRRVR 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++++ + QQ FPG E + D ++ P A+ EL+ P ED
Sbjct: 349 IGLLLAEYAKSKNLQLEPDDLRKVIMQQARNFPGQENMIFDFYKNNPRAIEELKGPALED 408
Query: 420 KVIDHILKS-VQIVDRKVTFDQLFDNSSESSP 450
K + +I +++ ++K T ++L
Sbjct: 409 KAVQYIFNHEIKLKEKKYTKEELEKYLEAEEQ 440
>gi|319651748|ref|ZP_08005874.1| trigger factor [Bacillus sp. 2_A_57_CT2]
gi|317396567|gb|EFV77279.1| trigger factor [Bacillus sp. 2_A_57_CT2]
Length = 428
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 78/438 (17%), Positives = 188/438 (42%), Gaps = 21/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L + + + ++ + + + + + N+ GFR GK+P + +G
Sbjct: 1 MSAKFEKLEGNRGVLTIEVDAEKVNEGLDAAFKKVVKQVNVPGFRKGKMPRGMFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D ++ E + + RP I + + IE +L + +
Sbjct: 61 ESLYQDAVDYLLPEAYANAIDETGIEPVDRPEIDVEQ---------IEQGKNLIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L+V V +++++ ++ + + +E ++E GD V +D+
Sbjct: 112 VKPEVKLGEYKGLEVKPLETNVTDEDVNSELTSLQERQAELAVKEEGKAETGDTVVMDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS + L G G+ KE+E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLELGSGQFIPGFEDQLTGTAAGESKEVEVTFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ E+ + ++++ A E+ A++ ++++ + V+
Sbjct: 232 PATFKVTVHEIKTKQLPELDDEFAKDADEEVETLDALKEKIKTRLEESKKHEAEHHVRDT 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
+++ + ++P ++V+ E N ++Q+ + Q + +
Sbjct: 292 VVEAAAANAEMEIPAAMVDTEVNRMMQEFEQRLQMQGMNLELYFQFSGQDEAALREQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I + NIEV++EE+ L + + ++ +L L
Sbjct: 352 EAEKRVRVNLTLEAIAKAENIEVSDEEVTEELNKMAEMYNMSADQITQAL----GSLEGL 407
Query: 413 RAPIFEDKVIDHILKSVQ 430
+A + K +D ++++ +
Sbjct: 408 KADLQIKKAVDFLVENSK 425
>gi|258451810|ref|ZP_05699832.1| trigger factor [Staphylococcus aureus A5948]
gi|257860522|gb|EEV83348.1| trigger factor [Staphylococcus aureus A5948]
Length = 433
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 186/441 (42%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLTVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ID ++ + E + + D + +P +++ + IE D +
Sbjct: 61 EALYQDAIDILLPDAYGEAIDETDIKPVAQPEVSVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P +++ + L++ + E+ + E+ + + ++ E GD V +D++
Sbjct: 112 VEPVVKLGDYKGLEIEKQETELSDDELQEAIDHSLGHLAEMVVKEDGVVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + +GS E L G+K ++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFEGGQAEGYDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ + +++A L E + + +++ + K +
Sbjct: 232 EATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
+ ++ T D+PE++V E + ++ + + Q + + +
Sbjct: 292 AITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQGLDLQTYFQISGQDETQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I E IE T+E++ L + +F + + + +
Sbjct: 352 DAEQRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTL----GNTDII 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKFVE 428
>gi|229587209|ref|YP_002845710.1| trigger factor [Rickettsia africae ESF-5]
gi|259533645|sp|C3PLX7|TIG_RICAE RecName: Full=Trigger factor; Short=TF
gi|228022259|gb|ACP53967.1| Trigger factor [Rickettsia africae ESF-5]
Length = 445
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 118/452 (26%), Positives = 216/452 (47%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +EGL + P + + D + + D+ K I GFR GKVP+S +K YG
Sbjct: 1 MGITILKNEGLDFHARISTPLSEIDDDIQKELLDLTKKVKIAGFRVGKVPVSIVKKKYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ ++ I+ I V ++ + + RP+I + ESD L+ + ++
Sbjct: 61 SVRNDIIERRINHSVNHVIKEHNLNIIGRPTIEELQNESD---------KALEFTVKMEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP+I I + + + EV+ K+++ Q+ ++A + + + + + GD+VT+D
Sbjct: 112 LPKITIPDLKKISLDRPKLEVNSKDVEEQLEKLAALTKNYTKESKAKIKDGDQVTIDAIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ ED + + I+GS L + L+G KTG + ++ FPE++ KDLAGK
Sbjct: 172 YIKEKAFEDGKLNDFKVIIGSNALIPGFEKQLIGSKTGSEVDVNVTFPENYHAKDLAGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
R IK V + P V++++ A + S +R +++I+ SE + +K + D
Sbjct: 232 ARFVVQIKAVHTAEPTVIDDEFAKKFQSNSLEELRTHFTKQIENESEEAINTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL+E E N + + +E YY+ LA RRV
Sbjct: 292 KLEKLLDFDVPESLLEQEKNILKSGTDKNEQDESLLKD---KSSKEITAYYNKLALRRVR 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++++ + QQ FPG E + D ++ P A+ L+ P ED
Sbjct: 349 IGLLLAEYAKSKNLQLEPDDLRKVIMQQARNFPGQENMIFDFYKNNPRAIEGLKGPALED 408
Query: 420 KVIDHILKS-VQIVDRKVTFDQLFDNSSESSP 450
K + +I +++ ++K T ++L
Sbjct: 409 KAVQYIFNHEIKLKEKKYTKEELEKYLEAEEQ 440
>gi|301060531|ref|ZP_07201371.1| trigger factor [delta proteobacterium NaphS2]
gi|300445374|gb|EFK09299.1| trigger factor [delta proteobacterium NaphS2]
Length = 446
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 92/439 (20%), Positives = 197/439 (44%), Gaps = 14/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +K++L V + + + ++ I+ + I GFRPGKVP ++S +GK
Sbjct: 1 MKASLEDISQVKKKLSVEVDAKEVNKKLDDAYGKIKKQTKIPGFRPGKVPRKILESYFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++ E++ E P+ + + D +P + G ++ + ++
Sbjct: 61 QIEADVASELVNETFPKAVEETDAFPLSQPELE---------KGPVKLDEKFIYSATMEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
PQ E+ + L+ ++I V ++ +++++ +I + N E + + GD V + Y
Sbjct: 112 RPQFEVKDYLGLEAEKEIVSVTDEAVEKRLEQIREGNGKLESLTELRPVQEGDFVVIRYQ 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D+ LE+ +N VG D + E LVGL D+ EI F ED+ +L GK
Sbjct: 172 GFEDDQPLEEIKDQNFLLNVGKGDFHKKFDEALVGLNKDDETEIVVDFEEDYFNNNLKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
VR SI ++ +N++ A F+ +R + + E V Q +KR+
Sbjct: 232 TVRFEVSIIDIKERNLPELNDEFARNLGADFKDLEGLREEVKKNVVAQEENRVEQDLKRR 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L IS F++P+ LV+ E + + +R + + Q + ++
Sbjct: 292 LLGKISQGTEFELPQVLVDAEVDFSVNSLRSNFERSGSSFEKAGISPAMLQQQFRPSSES 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV ++L I ++++I V+++E L + + + +++ + L+ +
Sbjct: 352 RVRERLILAQIAKQDDITVSDDEFTEGLEKLAKGMGQEVETIRKYYEA-RGEVDILKEQM 410
Query: 417 FEDKVIDHILKSVQIVDRK 435
E+K ++++++ + + +
Sbjct: 411 LEEKTLNYLVEKANVKEVE 429
>gi|296118748|ref|ZP_06837324.1| trigger factor [Corynebacterium ammoniagenes DSM 20306]
gi|295968237|gb|EFG81486.1| trigger factor [Corynebacterium ammoniagenes DSM 20306]
Length = 464
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 77/477 (16%), Positives = 193/477 (40%), Gaps = 20/477 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +L V +P L ++ I + I GFR GK P I + +G+
Sbjct: 1 MKTTVDKLSDTRVKLTVNVPFAELDKEIDQAYSAIAQQVQIPGFRKGKAPRQLIDARFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + +++++ + +++ D + +P+I I + +E ++ D
Sbjct: 61 GAMLEQVVNDMLPSRYEQAVNENDLKVIGQPNIDIPK---------VEDNDFVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IEI F + VT V +++++ ++ E+A+ + + + + GD +D
Sbjct: 112 VRPEIEIPDFSKISVTVPALAVSDEDVENELNELAERFGELKDTKRKLKTGDFAIIDIDA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD + + S + + + VG DL L G+K+ + E + K+
Sbjct: 172 EVDGEKVSEVSTEGLSYRVGDDDLIKGLDTALRGMKSEEDNEFSATIESG----EHKDKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ ++++ A + F++ +R +++ + V+ ++L
Sbjct: 228 ATIKVHVQQTKERKLPELDDEFAQMASEFDTIEELRENTKTGLEESKKNDQAVAVRDEVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLA 354
+ +F++P+S+V+ + + L ++ EM+ + + + + EE + A
Sbjct: 288 KAALAEVSFELPQSVVDEQVHAQLHQILGEMAHDDAALTRLLEAQGTTREEFDKESRESA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V T + L T+ + EV+++E+ + + + + + L +
Sbjct: 348 EESVRTQLFLDTLADVEEPEVSQQELSDHILFTAQSYGMDPNQFIQQISSN-GQIGNLFS 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ K + + V+ D + + E ++ E+ E + E
Sbjct: 407 DVRRGKALAAAICRVEAKDDEGNAVDVEQYFGEEDANDSTADTAADESKAEETSTDE 463
>gi|258424092|ref|ZP_05686974.1| trigger factor tig [Staphylococcus aureus A9635]
gi|257845713|gb|EEV69745.1| trigger factor tig [Staphylococcus aureus A9635]
Length = 433
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 187/441 (42%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLTVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ID ++ + E + + D + +P +++ + IE D +
Sbjct: 61 EALYQDAIDILLPDAYGEAIDETDIKPVAQPEVSVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ + ++ + + ++ E GD V +D++
Sbjct: 112 VEPEVKLGDYKGLEIEKQETELSDDDLQEAIDHSLGHLAEMVVKEDGVVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + +GS E L G+K ++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFEGGQAEGYDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ + +++A L E + + +++ + K +
Sbjct: 232 EATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
+ ++ T D+PE++V E + ++ + + Q + + +
Sbjct: 292 AITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQGLDLQTYFQISGQDESQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I E IE T+E++ L + +F + + + +
Sbjct: 352 DAEQRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTL----GNTDII 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKFVE 428
>gi|269125772|ref|YP_003299142.1| trigger factor [Thermomonospora curvata DSM 43183]
gi|268310730|gb|ACY97104.1| trigger factor [Thermomonospora curvata DSM 43183]
Length = 481
Score = 200 bits (507), Expect = 5e-49, Method: Composition-based stats.
Identities = 88/484 (18%), Positives = 200/484 (41%), Gaps = 27/484 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P L + ++ ++I + IKGFRPGK P I G+
Sbjct: 1 MKTDVEELSPTRVKLTVEVPFEELKPNLDKAYKEISKQVRIKGFRPGKAPAPLIDRYIGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + E+ + + +P + I + ++ ++ D
Sbjct: 61 GAVLQEAVNDALPELYGRAVEASEIFVLGQPEVEITK---------LDDGKEMTFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ ++ +D+L+VT D +V ++E++ + + + + E +E GD VT+D +
Sbjct: 112 VRPKFQVPDYDNLEVTVDEAKVTDEEVEETLGNLRERFASLTTVERAAETGDFVTIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +ED + + VGS E L G+ G+ K + AG++
Sbjct: 172 QVDGEAVEDAAATGYSYEVGSNSSVEGLDEALTGMSAGESKTFT----SKLVGGERAGQE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V +++ A F++ +R ++ + + + + L
Sbjct: 228 AEITVTVQSVKVKKLPEADDEFAQLASEFDTIEELRTDLRTRLGRTKRMQQLSQARDRAL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLA 354
+ + + +PE +V+ E +++ ++ + + EE A
Sbjct: 288 EALMEQIDIPLPEKVVQAEIERRNEQLEQQLKWSGLSKEAYLKQQGKTAEEFDAEIAEAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+R V G VL + + V EE+ + Q + +++ DH + L L +
Sbjct: 348 RRAVKGGFVLDQLALDEELGVENEELSEYVVSQAMQMGVQPQQLADHLTQS-GQLPALVS 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFD----QLFDNSSESSPEKLLDKSSKVETFQSEE 467
+ +K ++ +++ V+I D V + +L +++ E + + K E ++E
Sbjct: 407 EVLRNKALNLLVEHVKITDEAGNAVDIEALRRELSGEAAQPEAEAAEESAGKAEETKAEA 466
Query: 468 APSE 471
E
Sbjct: 467 KDEE 470
>gi|269203294|ref|YP_003282563.1| trigger factor [Staphylococcus aureus subsp. aureus ED98]
gi|262075584|gb|ACY11557.1| trigger factor [Staphylococcus aureus subsp. aureus ED98]
Length = 433
Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 188/441 (42%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP S + +G
Sbjct: 1 MTATWEKKEGNEGLLTVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRSIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ID ++ + E + + D + +P +++ + IE D +
Sbjct: 61 EALYQDAIDILLPDAYGEAIDETDIKPVAQPEVSVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ + E+ + + ++ E GD V +D++
Sbjct: 112 VEPEVKLGDYKGLEIEKQETELSDDELQEAIDHSLGHLAEMVVKEDGVVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + +GS E L G+K ++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFEGGQAEGYDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ + +++A L E + + +++ + K +
Sbjct: 232 EATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
+ ++ T D+PE++V E + ++ + + Q + + +
Sbjct: 292 AITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQGLDLQTYFQISGQDETQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I E IE T+E++ L + +F + + + +
Sbjct: 352 DAEQRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTL----GNTDII 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKFVE 428
>gi|118471714|ref|YP_888937.1| trigger factor [Mycobacterium smegmatis str. MC2 155]
gi|166229903|sp|A0R199|TIG_MYCS2 RecName: Full=Trigger factor; Short=TF
gi|118173001|gb|ABK73897.1| trigger factor [Mycobacterium smegmatis str. MC2 155]
Length = 469
Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats.
Identities = 78/467 (16%), Positives = 198/467 (42%), Gaps = 23/467 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F+ +++ + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFTELEPDFDRAFKELAKQVRLPGFRPGKAPRKLLEARIGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + +++ + E +S D + +P I I + +E +L D
Sbjct: 61 GAVLEQVVNDALPSRYSEAVSTSDLKPLGQPEIEITK---------LEDNEELVFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+I + + L++T D EV ++E+D ++ + + E + GD V++D +
Sbjct: 112 IRPEITLPELESLKITVDPIEVTDEEVDAELQSLRARFGTLKGVERGVQEGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + + VGS L E ++GLK + K + AG+
Sbjct: 172 TVDGNEVPEAATEGLSHEVGSGQLIDGLDEAIIGLKADESKTFTTKLVAG----EYAGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V +++ A +++ +R ++++ ++++ + +
Sbjct: 228 AEVTVTVKSVKERELPEPDDEFAQLASEYDTIEELRNSLVDQVRRLKSVQQAEQIRDKAI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLA 354
+ + + +PE +V+ + + ++ + ++ S EE A
Sbjct: 288 EALLEQTEVPLPEKIVQAQIDEVVHNAIHGLDHDEEKFAEQLAEQGSSREEFDAETRTEA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V T +++ + +K I+V++ ++ L ++ ++++ + N L + A
Sbjct: 348 EKAVKTQLLMDAVADKLEIQVSQNDLTERLVLMSRQYGLEPQQLIQI-LQQNNQLPAMFA 406
Query: 415 PIFEDKVIDHILKSVQIVDRK---VTFDQLFDNSSESSPEKLLDKSS 458
+ I ++ + + D + + F S E + E ++S+
Sbjct: 407 DVRRGLTIAAVVHAATVTDTDGNVIDTMEFFGPSGEQAAEDSAEEST 453
>gi|255658238|ref|ZP_05403647.1| trigger factor [Mitsuokella multacida DSM 20544]
gi|260849548|gb|EEX69555.1| trigger factor [Mitsuokella multacida DSM 20544]
Length = 429
Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats.
Identities = 77/436 (17%), Positives = 188/436 (43%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E + L + + + + + + + + ++ +I GFR GK P ++ GK
Sbjct: 1 MKVTVENGENQQVTLTIEVEAAEVNKAVEQACKRLANRVSIPGFRKGKAPRMIVERHVGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E D + + + + ++ RPS+ I +E DL + +
Sbjct: 61 DAVLQEAFDIVAPKALSKAFDEQKIDPVTRPSVDIET---------LEEGKDLVFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDY 177
P++++ + L V ++ + ++++++Q+ E + GD T+D+
Sbjct: 112 PRPEVKLGDYKGLNVPKNEVNITDEDVEKQLKTFQDRQGKLVDAPEGAEVKDGDFTTLDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD + K+ +GS + LVG K G+++++ FPE++ K+LAG
Sbjct: 172 KGFVDGEAFDGGEGKDYPLQIGSNSFIPGFEDQLVGAKIGEERDVNVKFPEEYHAKELAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K +I+ + + ++++LA + FE+ ++ + +++++E K
Sbjct: 232 KDATFKCTIRSIKTKELPAIDDELAKKVSKFETLDELKADIRKNLEENAERTAENDQKSA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHM 352
++ +N T D+P +++N ++Q++ + K + D + Y
Sbjct: 292 AIEMATNNITVDIPAVMIDNRVTAMIQEMAMRLEQQGMKLEQYLQYAGTDIAKLREQYRE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V T ++L + + +I+V +++ + + +++ K + +L
Sbjct: 352 TAEKNVKTDLMLEEVAKAEDIKVEAKDLDEEVAAMAAAYGATPQQV-QKIIKEQGRIGDL 410
Query: 413 RAPIFEDKVIDHILKS 428
A + K I+ +
Sbjct: 411 AASVLRKKTAQFIIDN 426
>gi|68535615|ref|YP_250320.1| trigger factor [Corynebacterium jeikeium K411]
gi|119370891|sp|Q4JWV5|TIG_CORJK RecName: Full=Trigger factor; Short=TF
gi|68263214|emb|CAI36702.1| putative trigger factor [Corynebacterium jeikeium K411]
Length = 526
Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats.
Identities = 79/468 (16%), Positives = 194/468 (41%), Gaps = 24/468 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L + +P L F++ + + N+ GFR GKVP +++ G+
Sbjct: 1 MKSSVEKLSATRTKLTIEVPFEELKPEFDKAYATLAQQVNMPGFRKGKVPAKILEARLGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+E++ + + + D +A +P I I E +E + D
Sbjct: 61 GVVLDQVINEMLPSRYSQAVEENDVKALGQPEIEIAE---------LEDGKHITFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ F + V + D++ ID ++ + + + + GD V++D +
Sbjct: 112 VRPEIEVPDFSAISVEVAPLKADDEAIDAELKNLQARFGTLKPADRAVKKGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D +++ + + + VG+ L + LVG+K G++ + A ++
Sbjct: 172 TIDGETVDEATTEGLSHEVGNDSLIEGLDDALVGMKEGEESTFTSKLVAG----EHADEE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V +++D A F++ ++ +++Q + +++ ++L
Sbjct: 228 AEVTVKLGSVKERELPELDDDFAQLASEFDTLDELKESLKGQVEQQLKNTQAGEIRDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLA 354
+ F++PE +V+ + + +Q++ + + +++ D E+ + A
Sbjct: 288 AEALEQTEFELPEGVVKEQVDAQIQQIIQQFGGDEKVFESMLAAQDMTREKFEEDARSSA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V T + L + +K EV++EE+ + ++ + + Q+ L L A
Sbjct: 348 EDSVRTQLFLDAVADKEQPEVSQEELMDHIAFTANQYGMDPNQFIMQLQQ-AGQLGSLFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSK 459
+ K + + + D V + F E+ +K +
Sbjct: 407 DVRRGKALALNIARTSVKDTDGADVDPKEYFG-DVEAEGDKADKAETD 453
>gi|205374364|ref|ZP_03227162.1| trigger factor [Bacillus coahuilensis m4-4]
Length = 428
Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats.
Identities = 84/438 (19%), Positives = 189/438 (43%), Gaps = 21/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + ++++ + ++ + + + N+ GFR GK+P + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVEVSADKVNEGLDQAFKKVVKQVNVPGFRKGKMPRGMFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + + + RP I + + E +L +
Sbjct: 61 ESLYQDALDIILPDAYANAIEEAGIDPVDRPEIDVTQM---------EKGKELIFTATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++++ + L+V + EV +++D ++ + + +E E GD + +D+
Sbjct: 112 VKPEVKLGEYKGLEVDEISTEVTAEDVDNEIKAMQERQAELVLKEEGTVEEGDTIVMDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS + LVGL G++K++E FPE++ +DLAGK
Sbjct: 172 GFVDGEAFEGGQAENYSLEIGSGQFIPGFEDQLVGLAAGEEKDVEVSFPEEYHAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + ++++ A E+ + ++ + + + + Q ++
Sbjct: 232 PATFKVKIHEIKTKQLPELDDEFAKDADEEVETLAELKEKLEKSLTESKKTEADQTIREV 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
++ S+ D+P ++V+ E N ++Q+ + Q +E
Sbjct: 292 LIQKASDNAEMDIPSAMVDTELNRMMQEFDQRLQMQGMNLELYFQFSGQDEEALRSQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ RV T + L I N+EV++EE ++ + ++ + + L
Sbjct: 352 DAEARVRTNLTLEAIAIAENLEVSDEEAEAEVNTMAEQYNMTADMIKQAL----GGVEGL 407
Query: 413 RAPIFEDKVIDHILKSVQ 430
+A + K ID ++++ +
Sbjct: 408 KADMKVRKAIDFLVENSK 425
>gi|298694946|gb|ADI98168.1| trigger factor prolyl isomerase [Staphylococcus aureus subsp.
aureus ED133]
Length = 433
Score = 199 bits (505), Expect = 8e-49, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 187/441 (42%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLTVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ID ++ + E + + D + +P +++ + IE D +
Sbjct: 61 EALYQDAIDILLPDAYGEAIDETDIKPVAQPEVSVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ + E+ + + ++ E GD V +D++
Sbjct: 112 VEPEVKLGDYKGLEIEKQETELSDDELQEAIDHSLGHLAEMVVKEDGVVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + +GS E L G+K ++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFEGGQAEGYDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ + +++A L E + + +++ + K +
Sbjct: 232 EATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLVEQKATDAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
+ ++ T D+PE++V E + ++ + + Q + + +
Sbjct: 292 AITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQGLDLQTYFQISGQDESQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I E IE T+E++ L + +F + + + +
Sbjct: 352 DAEQRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTL----GNTDII 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKFVE 428
>gi|15924665|ref|NP_372199.1| trigger factor [Staphylococcus aureus subsp. aureus Mu50]
gi|15927254|ref|NP_374787.1| trigger factor [Staphylococcus aureus subsp. aureus N315]
gi|21283348|ref|NP_646436.1| trigger factor [Staphylococcus aureus subsp. aureus MW2]
gi|49486502|ref|YP_043723.1| trigger factor [Staphylococcus aureus subsp. aureus MSSA476]
gi|57650547|ref|YP_186560.1| trigger factor [Staphylococcus aureus subsp. aureus COL]
gi|87160551|ref|YP_494317.1| trigger factor [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88195480|ref|YP_500284.1| trigger factor [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148268156|ref|YP_001247099.1| trigger factor [Staphylococcus aureus subsp. aureus JH9]
gi|150394223|ref|YP_001316898.1| trigger factor [Staphylococcus aureus subsp. aureus JH1]
gi|156979993|ref|YP_001442252.1| trigger factor [Staphylococcus aureus subsp. aureus Mu3]
gi|161509894|ref|YP_001575553.1| trigger factor [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253317181|ref|ZP_04840394.1| trigger factor [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253732327|ref|ZP_04866492.1| trigger factor [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253734540|ref|ZP_04868705.1| trigger factor [Staphylococcus aureus subsp. aureus TCH130]
gi|255006460|ref|ZP_05145061.2| trigger factor [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257794061|ref|ZP_05643040.1| trigger factor tig [Staphylococcus aureus A9781]
gi|258415765|ref|ZP_05682036.1| trigger factor [Staphylococcus aureus A9763]
gi|258421998|ref|ZP_05684918.1| trigger factor tig [Staphylococcus aureus A9719]
gi|258438244|ref|ZP_05689528.1| trigger factor [Staphylococcus aureus A9299]
gi|258443702|ref|ZP_05692041.1| trigger factor [Staphylococcus aureus A8115]
gi|258445913|ref|ZP_05694089.1| trigger factor [Staphylococcus aureus A6300]
gi|258448406|ref|ZP_05696523.1| trigger factor [Staphylococcus aureus A6224]
gi|258454298|ref|ZP_05702267.1| trigger factor [Staphylococcus aureus A5937]
gi|262048650|ref|ZP_06021533.1| trigger factor [Staphylococcus aureus D30]
gi|262052248|ref|ZP_06024453.1| trigger factor [Staphylococcus aureus 930918-3]
gi|282893171|ref|ZP_06301405.1| trigger factor tig [Staphylococcus aureus A8117]
gi|282920216|ref|ZP_06327941.1| trigger factor tig [Staphylococcus aureus A9765]
gi|282927806|ref|ZP_06335417.1| trigger factor tig [Staphylococcus aureus A10102]
gi|284024724|ref|ZP_06379122.1| trigger factor [Staphylococcus aureus subsp. aureus 132]
gi|294848697|ref|ZP_06789443.1| trigger factor tig [Staphylococcus aureus A9754]
gi|295405986|ref|ZP_06815794.1| trigger factor tig [Staphylococcus aureus A8819]
gi|296274897|ref|ZP_06857404.1| trigger factor [Staphylococcus aureus subsp. aureus MR1]
gi|297207611|ref|ZP_06924046.1| trigger factor [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297245088|ref|ZP_06928965.1| trigger factor tig [Staphylococcus aureus A8796]
gi|300911693|ref|ZP_07129137.1| trigger factor [Staphylococcus aureus subsp. aureus TCH70]
gi|304380733|ref|ZP_07363402.1| trigger factor [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|54039731|sp|P66935|TIG_STAAW RecName: Full=Trigger factor; Short=TF
gi|54039733|sp|P99080|TIG_STAAN RecName: Full=Trigger factor; Short=TF
gi|54042018|sp|P66934|TIG_STAAM RecName: Full=Trigger factor; Short=TF
gi|56749672|sp|Q6G8Q0|TIG_STAAS RecName: Full=Trigger factor; Short=TF
gi|67461616|sp|Q5HF97|TIG_STAAC RecName: Full=Trigger factor; Short=TF
gi|118574088|sp|Q2FG61|TIG_STAA3 RecName: Full=Trigger factor; Short=TF
gi|118574089|sp|Q2FXQ6|TIG_STAA8 RecName: Full=Trigger factor; Short=TF
gi|166229942|sp|A7X397|TIG_STAA1 RecName: Full=Trigger factor; Short=TF
gi|189035958|sp|A6U2E3|TIG_STAA2 RecName: Full=Trigger factor; Short=TF
gi|189035959|sp|A5ITK0|TIG_STAA9 RecName: Full=Trigger factor; Short=TF
gi|189035960|sp|A8Z2J6|TIG_STAAT RecName: Full=Trigger factor; Short=TF
gi|13701472|dbj|BAB42766.1| trigger factor [Staphylococcus aureus subsp. aureus N315]
gi|14247447|dbj|BAB57837.1| prolyl isomerase [Staphylococcus aureus subsp. aureus Mu50]
gi|21204788|dbj|BAB95484.1| trigger factor [Staphylococcus aureus subsp. aureus MW2]
gi|49244945|emb|CAG43406.1| trigger factor (prolyl isomerase) [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57284733|gb|AAW36827.1| trigger factor [Staphylococcus aureus subsp. aureus COL]
gi|87126525|gb|ABD21039.1| trigger factor [Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87203038|gb|ABD30848.1| trigger factor [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147741225|gb|ABQ49523.1| trigger factor [Staphylococcus aureus subsp. aureus JH9]
gi|149946675|gb|ABR52611.1| trigger factor [Staphylococcus aureus subsp. aureus JH1]
gi|156722128|dbj|BAF78545.1| prolyl isomerase [Staphylococcus aureus subsp. aureus Mu3]
gi|160368703|gb|ABX29674.1| peptidylprolyl isomerase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253723927|gb|EES92656.1| trigger factor [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253727481|gb|EES96210.1| trigger factor [Staphylococcus aureus subsp. aureus TCH130]
gi|257788033|gb|EEV26373.1| trigger factor tig [Staphylococcus aureus A9781]
gi|257839358|gb|EEV63831.1| trigger factor [Staphylococcus aureus A9763]
gi|257842042|gb|EEV66471.1| trigger factor tig [Staphylococcus aureus A9719]
gi|257848288|gb|EEV72279.1| trigger factor [Staphylococcus aureus A9299]
gi|257851108|gb|EEV75051.1| trigger factor [Staphylococcus aureus A8115]
gi|257855155|gb|EEV78094.1| trigger factor [Staphylococcus aureus A6300]
gi|257858374|gb|EEV81259.1| trigger factor [Staphylococcus aureus A6224]
gi|257863528|gb|EEV86287.1| trigger factor [Staphylococcus aureus A5937]
gi|259159849|gb|EEW44888.1| trigger factor [Staphylococcus aureus 930918-3]
gi|259163297|gb|EEW47856.1| trigger factor [Staphylococcus aureus D30]
gi|269941156|emb|CBI49543.1| trigger factor (prolyl isomerase) [Staphylococcus aureus subsp.
aureus TW20]
gi|282590316|gb|EFB95395.1| trigger factor tig [Staphylococcus aureus A10102]
gi|282594564|gb|EFB99549.1| trigger factor tig [Staphylococcus aureus A9765]
gi|282764489|gb|EFC04615.1| trigger factor tig [Staphylococcus aureus A8117]
gi|285817359|gb|ADC37846.1| Cell division trigger factor [Staphylococcus aureus 04-02981]
gi|294824723|gb|EFG41146.1| trigger factor tig [Staphylococcus aureus A9754]
gi|294968983|gb|EFG45004.1| trigger factor tig [Staphylococcus aureus A8819]
gi|296887628|gb|EFH26526.1| trigger factor [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|297178168|gb|EFH37416.1| trigger factor tig [Staphylococcus aureus A8796]
gi|300887114|gb|EFK82315.1| trigger factor [Staphylococcus aureus subsp. aureus TCH70]
gi|304340732|gb|EFM06663.1| trigger factor [Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|312830054|emb|CBX34896.1| trigger factor [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315130693|gb|EFT86679.1| trigger factor [Staphylococcus aureus subsp. aureus CGS03]
gi|315198630|gb|EFU28958.1| trigger factor [Staphylococcus aureus subsp. aureus CGS01]
gi|320140446|gb|EFW32300.1| trigger factor [Staphylococcus aureus subsp. aureus MRSA131]
gi|320143984|gb|EFW35753.1| trigger factor [Staphylococcus aureus subsp. aureus MRSA177]
gi|329314349|gb|AEB88762.1| Trigger factor [Staphylococcus aureus subsp. aureus T0131]
gi|329727083|gb|EGG63539.1| trigger factor [Staphylococcus aureus subsp. aureus 21172]
gi|329728412|gb|EGG64849.1| trigger factor [Staphylococcus aureus subsp. aureus 21189]
gi|329733151|gb|EGG69488.1| trigger factor [Staphylococcus aureus subsp. aureus 21193]
Length = 433
Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 187/441 (42%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLTVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ID ++ + E + + D + +P +++ + IE D +
Sbjct: 61 EALYQDAIDILLPDAYGEAIDETDIKPVAQPEVSVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ + E+ + + ++ E GD V +D++
Sbjct: 112 VEPEVKLGDYKGLEIEKQETELSDDELQEAIDHSLGHLAEMVVKEDGVVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + +GS E L G+K ++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFEGGQAEGYDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ + +++A L E + + +++ + K +
Sbjct: 232 EATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
+ ++ T D+PE++V E + ++ + + Q + + +
Sbjct: 292 AITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQGLDLQTYFQISGQDETQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I E IE T+E++ L + +F + + + +
Sbjct: 352 DAEQRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTL----GNTDII 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKFVE 428
>gi|256824759|ref|YP_003148719.1| trigger factor [Kytococcus sedentarius DSM 20547]
gi|256688152|gb|ACV05954.1| trigger factor [Kytococcus sedentarius DSM 20547]
Length = 452
Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats.
Identities = 74/473 (15%), Positives = 191/473 (40%), Gaps = 29/473 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P L + +E + I S+ I GFR GKVP I +G+
Sbjct: 1 MKSAVETLNPTRVKLAVEVPHEELKPALDEAYKTIGSQVQIPGFRKGKVPARIIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ E I+ ++ ++ +++ + P + I + + + LK + D
Sbjct: 61 GAVVQEAINTVMPDLYARSITENELTPIGEPELEITDIPA-------QDGEPLKFTVEVD 113
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P IE+ +++ D E+ ++++ ++ ++ + + ++ D V++D T
Sbjct: 114 VRPTIELPDTAGMKIEVDAVEISDEDVQTRLDDLRERFGTLNGVDRAAKSEDHVSIDLTA 173
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ + + V + +G + E LVG+ G+ K + D G+
Sbjct: 174 EIDGEEID--TVEGVSYQIGQGTMIEGLDEALVGMSAGETKTFTAPL----AGGDREGED 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +++ V V+++ A F++ ++ + ++++ F + + +IL
Sbjct: 228 SQVTVTLQSVKERELPEVDDEFAQLASSFDTVEELKADLRTQAERNAAFTQGIEARDKIL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + VP S+VE E + L++ D+E + +
Sbjct: 288 DSLIEQLDIPVPASIVEAEVHAHLERENR-------------LEDDEHRAEVTKSTEDAL 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++ + E++ +E+ + E+ L + + + + ++ +
Sbjct: 335 RAQFLMDALVERDAVEIEQNELLEYLMMSAQSSGMDPNQFISMLDQ-QGQIGQVVEEVRR 393
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + +L++ IVD + L + + ++ E+ + +E
Sbjct: 394 RKALAGVLETASIVDTQGNPVDLSALEDDEEADGGQAEAGSEESAVEADEQTE 446
>gi|49483918|ref|YP_041142.1| trigger factor [Staphylococcus aureus subsp. aureus MRSA252]
gi|82751264|ref|YP_417005.1| trigger factor [Staphylococcus aureus RF122]
gi|257425791|ref|ZP_05602215.1| trigger factor tig [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428457|ref|ZP_05604855.1| trigger factor tig [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431091|ref|ZP_05607468.1| trigger factor prolyl isomerase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433774|ref|ZP_05610132.1| trigger factor prolyl isomerase [Staphylococcus aureus subsp.
aureus E1410]
gi|257436690|ref|ZP_05612734.1| trigger factor tig [Staphylococcus aureus subsp. aureus M876]
gi|282904247|ref|ZP_06312135.1| bacterial trigger factor protein [Staphylococcus aureus subsp.
aureus C160]
gi|282906072|ref|ZP_06313927.1| trigger factor tig [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908987|ref|ZP_06316805.1| trigger factor [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282911303|ref|ZP_06319105.1| trigger factor [Staphylococcus aureus subsp. aureus WBG10049]
gi|282914472|ref|ZP_06322258.1| trigger factor [Staphylococcus aureus subsp. aureus M899]
gi|282916935|ref|ZP_06324693.1| trigger factor [Staphylococcus aureus subsp. aureus D139]
gi|282919441|ref|ZP_06327176.1| trigger factor tig [Staphylococcus aureus subsp. aureus C427]
gi|282924818|ref|ZP_06332484.1| trigger factor tig [Staphylococcus aureus subsp. aureus C101]
gi|283770740|ref|ZP_06343632.1| trigger factor [Staphylococcus aureus subsp. aureus H19]
gi|283958427|ref|ZP_06375878.1| trigger factor [Staphylococcus aureus subsp. aureus A017934/97]
gi|293503550|ref|ZP_06667397.1| trigger factor tig [Staphylococcus aureus subsp. aureus 58-424]
gi|293510565|ref|ZP_06669270.1| trigger factor tig [Staphylococcus aureus subsp. aureus M809]
gi|293537107|ref|ZP_06671787.1| trigger factor [Staphylococcus aureus subsp. aureus M1015]
gi|295428247|ref|ZP_06820876.1| trigger factor tig [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297590790|ref|ZP_06949428.1| trigger factor [Staphylococcus aureus subsp. aureus MN8]
gi|56749675|sp|Q6GG30|TIG_STAAR RecName: Full=Trigger factor; Short=TF
gi|118574090|sp|Q2YTB4|TIG_STAAB RecName: Full=Trigger factor; Short=TF
gi|49242047|emb|CAG40746.1| trigger factor (prolyl isomerase) [Staphylococcus aureus subsp.
aureus MRSA252]
gi|82656795|emb|CAI81224.1| trigger factor prolyl isomerase [Staphylococcus aureus RF122]
gi|257271485|gb|EEV03631.1| trigger factor tig [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275298|gb|EEV06785.1| trigger factor tig [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278039|gb|EEV08687.1| trigger factor prolyl isomerase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281867|gb|EEV12004.1| trigger factor prolyl isomerase [Staphylococcus aureus subsp.
aureus E1410]
gi|257284041|gb|EEV14164.1| trigger factor tig [Staphylococcus aureus subsp. aureus M876]
gi|282313184|gb|EFB43580.1| trigger factor tig [Staphylococcus aureus subsp. aureus C101]
gi|282317251|gb|EFB47625.1| trigger factor tig [Staphylococcus aureus subsp. aureus C427]
gi|282319422|gb|EFB49774.1| trigger factor [Staphylococcus aureus subsp. aureus D139]
gi|282321653|gb|EFB51978.1| trigger factor [Staphylococcus aureus subsp. aureus M899]
gi|282324998|gb|EFB55308.1| trigger factor [Staphylococcus aureus subsp. aureus WBG10049]
gi|282327251|gb|EFB57546.1| trigger factor [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331364|gb|EFB60878.1| trigger factor tig [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595865|gb|EFC00829.1| bacterial trigger factor protein [Staphylococcus aureus subsp.
aureus C160]
gi|283460887|gb|EFC07977.1| trigger factor [Staphylococcus aureus subsp. aureus H19]
gi|283470943|emb|CAQ50154.1| trigger factor [Staphylococcus aureus subsp. aureus ST398]
gi|283790576|gb|EFC29393.1| trigger factor [Staphylococcus aureus subsp. aureus A017934/97]
gi|290919952|gb|EFD97020.1| trigger factor [Staphylococcus aureus subsp. aureus M1015]
gi|291095216|gb|EFE25481.1| trigger factor tig [Staphylococcus aureus subsp. aureus 58-424]
gi|291466456|gb|EFF08977.1| trigger factor tig [Staphylococcus aureus subsp. aureus M809]
gi|295127647|gb|EFG57284.1| trigger factor tig [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297575676|gb|EFH94392.1| trigger factor [Staphylococcus aureus subsp. aureus MN8]
gi|302333341|gb|ADL23534.1| trigger factor (prolyl isomerase) [Staphylococcus aureus subsp.
aureus JKD6159]
gi|312437866|gb|ADQ76937.1| trigger factor [Staphylococcus aureus subsp. aureus TCH60]
gi|315195578|gb|EFU25965.1| trigger factor [Staphylococcus aureus subsp. aureus CGS00]
gi|323440780|gb|EGA98489.1| trigger factor [Staphylococcus aureus O11]
gi|323442935|gb|EGB00558.1| trigger factor [Staphylococcus aureus O46]
Length = 433
Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 187/441 (42%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLTVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ID ++ + E + + D + +P +++ + IE D +
Sbjct: 61 EALYQDAIDILLPDAYGEAIDETDIKPVAQPEVSVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ + E+ + + ++ E GD V +D++
Sbjct: 112 VEPEVKLGDYKGLEIEKQETELSDDELQEAIDHSLGHLAEMVVKEDGVVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + +GS E L G+K ++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFEGGQAEGYDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ + +++A L E + + +++ + K +
Sbjct: 232 EATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
+ ++ T D+PE++V E + ++ + + Q + + +
Sbjct: 292 AITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQGLDLQTYFQISGQDESQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I E IE T+E++ L + +F + + + +
Sbjct: 352 DAEQRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTL----GNTDII 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKFVE 428
>gi|300780628|ref|ZP_07090483.1| trigger factor [Corynebacterium genitalium ATCC 33030]
gi|300533614|gb|EFK54674.1| trigger factor [Corynebacterium genitalium ATCC 33030]
Length = 489
Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats.
Identities = 77/438 (17%), Positives = 180/438 (41%), Gaps = 18/438 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + +L V +P L ++ + I + NI GFR GK P I + +G+
Sbjct: 17 KTSVDKLSDTRAKLTVTVPFEELGTEIDQAYKAIAQQVNIPGFRRGKAPRQLIDARFGRG 76
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
IL + +++++ + +++ + +P I I E IE ++ DI
Sbjct: 77 PILEQVVNDMLPTRYEQAVTENELNVLGQPQIEITE---------IEDNDHVEFTAEVDI 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ F + VT +V + +D ++ + + + + + GD +D +
Sbjct: 128 RPEIEVPDFSKISVTVPSIKVGDDAVDEELDNLRARFGELKDTKRKLKKGDFAVIDLEAT 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD +E+ S + + + +G DL + + GLKTG+ E E + A V
Sbjct: 188 VDGEKIEEASTEGISYEIGRDDLMEGLDKAIKGLKTGESAEFESEIQYGEHKGEQATITV 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ + + LP + + + F++ +R +++++S+ ++ ++L
Sbjct: 248 TVQQTKER---TLPELDEEFVQMASEFDTVEELRESTKTQLEENSKNQQAADIRDEVLKA 304
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKR 356
+ +F++P + V+ + + L ++ +M+ + EE + A+
Sbjct: 305 ALAQSSFELPTAAVDEQVHNQLHQILGQMAHDESAFAQLLEAQGTTREEFDKESRENAED 364
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ T + L + ++ EV+++E+ + + + + Q+ +A L A +
Sbjct: 365 SIRTQLFLDAVADQEEPEVSQQELTDHILFTAQSYGMDPNQFIMQLQQS-GQVANLYADV 423
Query: 417 FEDKVIDHILKSVQIVDR 434
K + + + D
Sbjct: 424 RRGKALAAAIARTTVKDE 441
>gi|15604672|ref|NP_221190.1| trigger factor [Rickettsia prowazekii str. Madrid E]
gi|6226230|sp|Q9ZCB7|TIG_RICPR RecName: Full=Trigger factor; Short=TF
gi|3861367|emb|CAA15266.1| TRIGGER FACTOR (tig) [Rickettsia prowazekii]
gi|292572503|gb|ADE30418.1| Trigger factor [Rickettsia prowazekii Rp22]
Length = 445
Score = 199 bits (505), Expect = 9e-49, Method: Composition-based stats.
Identities = 112/452 (24%), Positives = 220/452 (48%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M +I +EGL + P + + D + + D+ K + GFR GKVP+S +K YG
Sbjct: 1 MGIIVLKNEGLNFHARISTPLSEIDDDIQKELLDLTKKVKVAGFRAGKVPVSIVKKKYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + I++ I +V I+ + + RP I + E D DL+ + ++
Sbjct: 61 SVRHDIIEKRINNLVNHIIKEYNLNIIGRPKIEELQNEPD---------KDLEFTVKIEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP+I I + + + V+ ++++ Q+ ++A + + +T+ + GD+VT+D
Sbjct: 112 LPKITIPDLKKISLDRPKLAVNSQDVEIQLEKLAALTKCYTKESKTKIKDGDQVTIDAIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + + + + ++GS L + L+G KTG++ ++ FPE++ K+L+GK
Sbjct: 172 YIKDRAFDGGKLNDFKVVIGSNTLIQGFEQQLIGSKTGNEVDVNVTFPENYHDKNLSGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
IK V + P +++ + A + S +R +++I+ SE + +K + D
Sbjct: 232 AHFVVQIKAVHTAEPTIIDEEFAKKFQSNSLEELRTHFAKQIENESEEAINTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL+E E N + + + + S +E +YY+ LA RRV
Sbjct: 292 KLEKLLDFDVPESLLEQEKNILKSET---DKNKHDGSLLNGKSSKEITEYYNKLALRRVR 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++ + + QQ FPG E + D ++ P A+ L+ P ED
Sbjct: 349 IGLLLAEYAKFKNLQLEPDDFKKIIMQQARNFPGQENMIFDFYKNNPRAIEGLKGPALED 408
Query: 420 KVIDHILKS-VQIVDRKVTFDQLFDNSSESSP 450
K + +I + +Q+ +++ T ++L
Sbjct: 409 KTVQYIFNNEIQLKEKRYTKEELEKYLETEEQ 440
>gi|151221781|ref|YP_001332603.1| trigger factor [Staphylococcus aureus subsp. aureus str. Newman]
gi|172048937|sp|A6QHK9|TIG_STAAE RecName: Full=Trigger factor; Short=TF
gi|150374581|dbj|BAF67841.1| trigger factor, prolyl isomerase [Staphylococcus aureus subsp.
aureus str. Newman]
Length = 433
Score = 199 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 187/441 (42%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLTVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ID ++ + E + + D + +P +++ + IE D +
Sbjct: 61 EALYQDAIDILLPDAYGEAIDETDIKPVAQPEVSVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ + E+ + + ++ E GD V +D++
Sbjct: 112 VEPEVKLGDYKGLEIEKQETELSDDELQEAIDHSLGHLAEMVVKEDGVVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + +GS E L G+K ++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFEGGQAEGYDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ + +++A L E + + +++ + K +
Sbjct: 232 EATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
+ ++ T D+PE+++ E + ++ + + Q + + +
Sbjct: 292 AITKATDNTTIDIPEAMINTELDRMVSEFAQRIQQQGLDLQTYFQISGQDETQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I E IE T+E++ L + +F + + + +
Sbjct: 352 DAEQRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTL----GNTDII 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKFVE 428
>gi|148272643|ref|YP_001222204.1| trigger factor [Clavibacter michiganensis subsp. michiganensis
NCPPB 382]
gi|166229035|sp|A5CR04|TIG_CLAM3 RecName: Full=Trigger factor; Short=TF
gi|147830573|emb|CAN01508.1| putative cell division trigger factor [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 484
Score = 199 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 83/461 (18%), Positives = 177/461 (38%), Gaps = 34/461 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L + L + I + I GFR GKVP I G+
Sbjct: 1 MKTTVEKLSPTRVKLAISATPEDLKPHIDHAYGHIAEQVAIPGFRKGKVPPPIIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L +++ + + + D R RP + E + T DL L + D
Sbjct: 61 EAVLEHAVNDGMDGFYQAAVKETDIRPLGRPEADVKEWPGK------DLTGDLLLEIEVD 114
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ ++ +++ L++T D EV + E+ ++ + + ++ GD V +D T
Sbjct: 115 VRPEFDLPAYEGLELTVDSVEVTDDEVATELDSLRSRFGTLITVDRPAKTGDFVQIDLTA 174
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++ ++ S + + +GS DL E L L G+ E D G+
Sbjct: 175 TIGGNAVDTASG--ISYELGSGDLIDGIDEALESLTAGESTTFE----SKLLGGDNEGET 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V ++D A F++ +R ++ + F + + QI+
Sbjct: 229 AEIAVTVQSVKERELPEADDDFAQIASEFDTIDELRADLKVQVGKSKVFGQVTQARDQIV 288
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + VPE LVE+E L+ D+ +++
Sbjct: 289 DKLLEGVEIPVPEKLVEDEVQRHLENENR-------------LEDDVHRAEVKESSEKAF 335
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++L I EK ++V+++E+ L Q ++ + + Q+ N + + +
Sbjct: 336 RQQLLLDVIAEKEELKVSQDELTQYLIQGAQQYNMEPNEFVQVLQQN-NQIPAMVGEVAR 394
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFDN---SSESSPEKL 453
+K + +L ++VD + V + +++ E+
Sbjct: 395 NKALAVVLDKAKVVDADGKVVDVTEFTKPVVRDADAVSEEP 435
>gi|19553611|ref|NP_601613.1| trigger factor [Corynebacterium glutamicum ATCC 13032]
gi|62391255|ref|YP_226657.1| trigger factor [Corynebacterium glutamicum ATCC 13032]
gi|145296395|ref|YP_001139216.1| trigger factor [Corynebacterium glutamicum R]
gi|23822222|sp|Q8NMZ9|TIG_CORGL RecName: Full=Trigger factor; Short=TF
gi|166229041|sp|A4QGE8|TIG_CORGB RecName: Full=Trigger factor; Short=TF
gi|21325185|dbj|BAB99807.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Corynebacterium glutamicum ATCC 13032]
gi|41326595|emb|CAF21077.1| TRIGGER FACTOR, PPIASE INVOVED INTO CELL DIVISION, MOLECULAR
CHAPERONE [Corynebacterium glutamicum ATCC 13032]
gi|140846315|dbj|BAF55314.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 449
Score = 199 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 73/441 (16%), Positives = 188/441 (42%), Gaps = 20/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++ V +P + L ++ + + I GFR GK P I + +G+
Sbjct: 1 MKSSVEKLSDTRSKITVEVPFSELKPEIDQAYAALAQQVQIPGFRKGKAPRQLIDARFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + +++++ + + +A +P++ + + IE ++ D
Sbjct: 61 GAVLEQVVNDMLPNRYAQAIEAEGIKAIGQPNVEVTK---------IEDNELVEFVAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ F+D+ V + DE+ I+ ++ + + + + G+ VT++ T
Sbjct: 112 VRPEFELPKFEDITVEVPAIKADEEAIEAELETLRARFSTLKDHNHKLKKGEFVTINITA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
S+D +E+ + + + + +GS DL + L+G K + F + + + GK+
Sbjct: 172 SIDGEKIEEATTEGLSYEIGSDDLIDGLDKALIGAKKDET----VEFTSELANGEHKGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ I ++++ A F++ +R ++ + ++ ++L
Sbjct: 228 AQISVEITATKQRELPELDDEFAQLASEFDTIEELRESTVSDVEAKQKNEQAAAIRDEVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHMLA 354
+ F +P+S+V+ + + L ++ E++ N + + EE + A
Sbjct: 288 AAALGEADFALPQSIVDEQAHSQLHQLLGELAHDDAALNSLLEAQGTTREEFDKKNVEDA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V T + L T+ E EV+++E+ + + + + Q+ +A L +
Sbjct: 348 EKAVRTQLFLDTLSEVEEPEVSQQELTDHILFTAQSYGMDPNQFIGQLQQS-GQIANLFS 406
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
+ K + + V + D +
Sbjct: 407 DVRRGKALAQAICRVNVKDSE 427
>gi|298529123|ref|ZP_07016526.1| trigger factor [Desulfonatronospira thiodismutans ASO3-1]
gi|298510559|gb|EFI34462.1| trigger factor [Desulfonatronospira thiodismutans ASO3-1]
Length = 442
Score = 199 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 87/435 (20%), Positives = 194/435 (44%), Gaps = 13/435 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +K+++++ +P+ + + + +KGFR GKVP S ++ + K
Sbjct: 1 MEYTVEDISPVKKKINIQVPTEEVHAALSAATAMYSRDVELKGFRKGKVPASVVEGRFKK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I +E ++I + +I+S+ R D+ +GL+E D +S+++
Sbjct: 61 QIYNEATTDLINVHINQIMSEMKFNPLSR---------IDVDAGLLEREKDFNYSVSFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
P+ E+ + + + ++ V+ +E+D+ + I N +E + V +D+
Sbjct: 112 APEFELPPYKGITIEEEEVLVNAEEVDQVINRIRNNMAELVVIDEERPPRDNEAVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ +E N Q +G E E++ LK G+ E P+D ++LAG+
Sbjct: 172 AFDNGKPIEGVKADNFQMTLGEGGALPEFEELIKELKPGETGSREIPLPDDFLNEELAGR 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + ++ + V+++LA GF+S +R + Q K + L + +++
Sbjct: 232 PVLMQVTLHSIKEKKLPDVDDELAQKAGGFDSVEKLREVIEQSYKSTRKELHKSSAQKKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + + F++PESLV+ + ++ +M + ++ EE + + A+
Sbjct: 292 LDELKARVEFELPESLVQGRIQQKISDLQSQMEKKGKSLDSLGKSREELEEQFRPEAEDM 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + L + ++V+E+EM + + +Q ++ +Q N + L+ +
Sbjct: 352 AKSQLFLLAVARAEGLDVSEDEMDAYIQKQAQSGGQDPAQLKKFYQDN-NLMFALKDSLL 410
Query: 418 EDKVIDHILKSVQIV 432
DK +D I ++ Q+
Sbjct: 411 ADKAMDFIYENAQVN 425
>gi|116670952|ref|YP_831885.1| trigger factor [Arthrobacter sp. FB24]
gi|166229013|sp|A0JXL5|TIG_ARTS2 RecName: Full=Trigger factor; Short=TF
gi|116611061|gb|ABK03785.1| trigger factor [Arthrobacter sp. FB24]
Length = 469
Score = 199 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 80/443 (18%), Positives = 170/443 (38%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L+V +P L S +E + + S+ + GFR GKVP I G+
Sbjct: 1 MKSAVENLTPTRVKLNVEVPFEELKPSIDEAYKTVASQIQVPGFRKGKVPAKLIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L I+E + E + + R RP + I E +LK D
Sbjct: 61 GYVLETAINEGLNGWYQEAVQETGIRPLSRPEVEITE-----VPDPTATDGELKFHAEVD 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ + ++V E E ++D+ + E+ + + + GD +T+D T
Sbjct: 116 VRPEIELPDYSGIKVEVAAAESSEADVDKALDELRGRFGTLKSVDRPAADGDFLTIDITA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
S+D ++ S + + VG+ + E + GL + + D AG+
Sbjct: 176 SIDGAEVDSASG--LSYQVGAGTMLEGLDEAVTGLSADEDAIFDTTLV----GGDHAGEA 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +K V ++D A F++ + +R +++ + + + ++L
Sbjct: 230 AQVKVVVKSVKERELPEADDDFAQLASEFDTLAELREDLAKQAAESKVVEQGVEARDKVL 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + VP S+VE + + A + + EE +R
Sbjct: 290 DKLVELVEVPVPASVVEEQLEQHFK--------AENSHGDGEHDTEEHRAEVKANTERAF 341
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L I +K + V++ E+ + ++ + + + + + +
Sbjct: 342 QNEIILDAIADKEEVGVSQNELIDYIVTTASQYGMDPNQFAQIIDQS-GQVPMMVSEVRR 400
Query: 419 DKVIDHILKSVQIVDRKVTFDQL 441
K + +L ++ D + L
Sbjct: 401 RKALAVVLGQAEVTDSEGNKVDL 423
>gi|27468268|ref|NP_764905.1| trigger factor [Staphylococcus epidermidis ATCC 12228]
gi|57867150|ref|YP_188813.1| trigger factor [Staphylococcus epidermidis RP62A]
gi|282875904|ref|ZP_06284771.1| trigger factor [Staphylococcus epidermidis SK135]
gi|293366376|ref|ZP_06613055.1| trigger factor [Staphylococcus epidermidis M23864:W2(grey)]
gi|38258350|sp|Q8CNY4|TIG_STAES RecName: Full=Trigger factor; Short=TF
gi|67461621|sp|Q5HNM8|TIG_STAEQ RecName: Full=Trigger factor; Short=TF
gi|27315814|gb|AAO04949.1|AE016748_183 trigger factor [Staphylococcus epidermidis ATCC 12228]
gi|57637808|gb|AAW54596.1| trigger factor [Staphylococcus epidermidis RP62A]
gi|281294929|gb|EFA87456.1| trigger factor [Staphylococcus epidermidis SK135]
gi|291319501|gb|EFE59868.1| trigger factor [Staphylococcus epidermidis M23864:W2(grey)]
gi|329724694|gb|EGG61200.1| trigger factor [Staphylococcus epidermidis VCU144]
gi|329733741|gb|EGG70067.1| trigger factor [Staphylococcus epidermidis VCU045]
gi|329737250|gb|EGG73504.1| trigger factor [Staphylococcus epidermidis VCU028]
Length = 433
Score = 199 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 191/441 (43%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGVLTVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + + +P + + + IE D +
Sbjct: 61 EALYQDAVDILLPEAYGEAIEETEINPVAQPEVNVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + ++ ++E+ + + ++ E GD V +D++
Sbjct: 112 VEPEVKLGDYKGLEIEKQETDLSDEELQESIDHSLSHLAEMVVKEDGAVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + + +GS E + G+KTGD+K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFDGGQAEGYDLEIGSGSFIPGFEEQIEGMKTGDEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ +N+++A E+ + +++ + K +
Sbjct: 232 EATFKTKVNEIKFKDVPELNDEIANELDSDAENVDEYKENLRKRLSEQKATEAENTEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ + + D+PE+++ E + ++Q+ + Q +E+
Sbjct: 292 AINKATENASIDIPEAMINTELDRMIQEFGQRIQQQGLDLQTYYQISGQNEEQLRDQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I ++ NIEV++E++ L + +F + + +
Sbjct: 352 DAEQRVKTNLTLTAIADEENIEVSDEDIDKELEKMSEQFNISVEDIKSTL----GNTDIV 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKYVE 428
>gi|71083578|ref|YP_266297.1| trigger factor [Candidatus Pelagibacter ubique HTCC1062]
gi|119370917|sp|Q4FM95|TIG_PELUB RecName: Full=Trigger factor; Short=TF
gi|71062691|gb|AAZ21694.1| trigger factor [Candidatus Pelagibacter ubique HTCC1062]
Length = 477
Score = 199 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 124/472 (26%), Positives = 232/472 (49%), Gaps = 24/472 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + +GL +++ V I + +E+ E+I+ N+KGFRPGKVP +K +G+
Sbjct: 1 MKVTVENKKGLNKDIKVFIDKETMNSYMDEKYEEIKKTVNLKGFRPGKVPKEVLKRQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I SE +D+++K+ + L + A +P + + D DL+ +S
Sbjct: 61 AIFSEVLDKVLKDTSVKALEDNKIKPAGQPKLDLKTYGED---------KDLEYVMSITE 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP++E+ S ++++ + ++D E D+++ EIAK+ F+ + + + V DY
Sbjct: 112 LPKVELKSVENIKFDEYSVKIDTNETDKRIKEIAKSQNNFKEVAADVRAVEENLVIFDYK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D KN Q I+G + L+G+K D+K ++ PE++ K+ A K
Sbjct: 172 ATIDGKDFTGGEGKNTQLILGKDLFIKGFDKQLIGVKKNDEKSVDVTLPENYPQKEYANK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
K I EV V +++ A LG + + ++ L S++I + + + K QIL
Sbjct: 232 KANFICKITEVKKSEEVKIDDVFAKNLGAKDLADLKVLVSKQINDEYKNSLDKLAKTQIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
I N ++PE+L+E E + Q + E S + + +AK+R+
Sbjct: 292 KEIENFKVDEIPENLIEEEVKILSQGMTEEDSKK-------------SRKNFEEIAKKRI 338
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L GE+N I+VTE+E+Q+ + +QL PG EK +++ +QK P+ALA LR ++E
Sbjct: 339 KVGLILNEFGEQNKIKVTEQEVQAEVQKQLRMMPGQEKMVMEFYQKNPSALASLRGTVYE 398
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+K+ID I + ++++ ++ E + + E
Sbjct: 399 EKIIDLIKTKAKPSKKEISKEEAEKILKEHQKQDHNHEHDHNHDHDHPEEKK 450
>gi|319400991|gb|EFV89210.1| trigger factor [Staphylococcus epidermidis FRI909]
Length = 433
Score = 199 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 80/443 (18%), Positives = 191/443 (43%), Gaps = 21/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGVLTVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + + +P + + + IE D +
Sbjct: 61 EALYQDAVDILLPEAYGEAIEETEISPVAQPEVNVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ ++E+ + + ++ E GD V +D++
Sbjct: 112 VEPEVKLGDYKGLEIEKQETELSDEELQESIDHSLSHLAEMVVKEDGAVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + + +GS E + G+KTGD+K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFDGGQAEGYDLEIGSGSFIPGFEEQIEGMKTGDEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ +N+++A E+ + +++ + K +
Sbjct: 232 EATFKTKVNEIKFKDVPELNDEIANELDSDAENVDEYKENLRKRLSEQKATEAENTEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ + + D+PE+++ E + ++Q+ + Q +E+
Sbjct: 292 AINKATENASIDIPEAMINTELDRMIQEFGQRIQQQGLDLQTYYQISGQNEEQLRDQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I ++ NIEV++E++ L + +F + + +
Sbjct: 352 DAEQRVKTNLTLTAIADEENIEVSDEDIDKELEKMSEQFNISVEDIKSTL----GNTDIV 407
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKYVEVT 430
>gi|313836725|gb|EFS74439.1| trigger factor [Propionibacterium acnes HL037PA2]
gi|314929869|gb|EFS93700.1| trigger factor [Propionibacterium acnes HL044PA1]
gi|314972296|gb|EFT16393.1| trigger factor [Propionibacterium acnes HL037PA3]
Length = 500
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 83/483 (17%), Positives = 189/483 (39%), Gaps = 29/483 (6%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-I 62
+ + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+ +
Sbjct: 23 TLEKLSTHRVKLTIEMPFDELKPSLDKAYKDIAAQVNVPGFRKGKVPAPIIDQRFGRGVV 82
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
L E I++ + + + + +P I + +E ++ D+ P
Sbjct: 83 LQEAINDALPAAYGKAVEENTVVPLGQPEIEVT---------RLEDGEVVEFTAEVDVRP 133
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVD 182
++ + V EV ++++D ++ + + E + D VT+D + D
Sbjct: 134 DFDLPDVAAISVEVPAVEVPDEDVDERIETLRQRFATNTEVERAAAKDDLVTIDLIGTRD 193
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
LE+ + +V + VGS + E + GLK G+ E F L G+ +
Sbjct: 194 GETLEEATASDVTYKVGSEGMLEGLDEAVTGLKAGESAE----FHSTLVGGPLRGQDADV 249
Query: 243 NFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++ +V V++D A F++ MR ++ + + ++L+ +
Sbjct: 250 KVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVLEEV 309
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYHMLA 354
+K ++P +L+++E Q+V +++ A + ++ +
Sbjct: 310 ISKIDIELPANLIDSELEARRQQVNQQLTEAGMTVEEYLEDSEEEVDNADDFWAEIEKRS 369
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 370 LDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPDWMQ 428
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFD------NSSESSPEKLLDKSSKVETFQSEEA 468
I K + ++ + + D K +L + E + E + S + A
Sbjct: 429 EIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADEPAEEDAPGEDSAEKVDDKAAA 488
Query: 469 PSE 471
+
Sbjct: 489 TKK 491
>gi|260578315|ref|ZP_05846231.1| trigger factor [Corynebacterium jeikeium ATCC 43734]
gi|258603617|gb|EEW16878.1| trigger factor [Corynebacterium jeikeium ATCC 43734]
Length = 524
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 76/461 (16%), Positives = 191/461 (41%), Gaps = 23/461 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L + +P L F++ + + N+ GFR GKVP +++ G+
Sbjct: 1 MKSSVEKLSATRTKLTIEVPFEELKPEFDKAYATLAQQVNMPGFRKGKVPAKILEARLGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+E++ + + + D +A +P I I+E +E + D
Sbjct: 61 GVVLDQVINEMLPSRYSQAVEENDVKALGQPEIEISE---------LEDGKHVTFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ F + V + D++ ID ++ + + + + GD V++D +
Sbjct: 112 VRPEIEVPDFSAISVEVAPLKADDEAIDAELKNLQARFGTLKPADRAVKKGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D +++ + + + VG+ L + L+G+K G++ + A ++
Sbjct: 172 TIDGETVDEATTEGLSHEVGNDSLIEGLDDALIGMKEGEESTFTSKLVAG----EHADEE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V +++D A F++ ++ +++Q + +++ ++L
Sbjct: 228 AEVTVKLGSVKERELPELDDDFAQLASEFDTLDELKESLKGQVEQQLKNTQAGEIRDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLA 354
+ F++PE +V+ + + +Q++ + + +++ D E+ + A
Sbjct: 288 AEALEQTEFELPEGVVKEQVDAQIQQIIQQFGGDEKVFESMLAAQDMTREKFEEDARSSA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V T + L + +K EV++EE+ + ++ + + Q+ L L A
Sbjct: 348 EDSVRTQLFLDAVADKEQPEVSQEELMDHIAFTANQYGMDPNQFIMQLQQ-AGQLGSLFA 406
Query: 415 PIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEK 452
+ K + + + D V + F +
Sbjct: 407 DVRRGKALALNIARTSVKDTDGADVDPKEYFGDVEAEDKAD 447
>gi|170781892|ref|YP_001710224.1| trigger factor [Clavibacter michiganensis subsp. sepedonicus]
gi|189035931|sp|B0RAS0|TIG_CLAMS RecName: Full=Trigger factor; Short=TF
gi|169156460|emb|CAQ01608.1| putative cell division trigger factor [Clavibacter michiganensis
subsp. sepedonicus]
Length = 480
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 83/461 (18%), Positives = 177/461 (38%), Gaps = 34/461 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L + L + I + I GFR GKVP I G+
Sbjct: 1 MKTTVEKLSPTRVKLAISATPEDLKPHIDHAYGHIAEQVAIPGFRKGKVPPPIIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L +++ + + + D R RP + E + T DL L + D
Sbjct: 61 EAVLEHAVNDGMDGFYQAAVKETDIRPLGRPEADVKEWPGK------DLTGDLLLEIEVD 114
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ ++ +++ L++T D EV + E+ ++ + + ++ GD V +D T
Sbjct: 115 VRPEFDLPAYEGLELTVDSVEVTDDEVATELDSLRSRFGTLITVDRPAKTGDFVQIDLTA 174
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++ ++ S + + +GS DL E L L G+ E D G+
Sbjct: 175 TIAGNAVDTASG--ISYELGSGDLIDGIDEALESLTAGESTTFE----SKLLGGDNEGET 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +++ V ++D A F++ +R ++ + F + + QI+
Sbjct: 229 AEIAVTVQSVKERELPEADDDFAQIASEFDTIDELRADLKVQVGKSKVFGQVTQARDQIV 288
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + VPE LVE+E L+ D+ +++
Sbjct: 289 DKLLEGVEIPVPEKLVEDEVQRHLENENR-------------LEDDVHRAEVKESSEKAF 335
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++L I EK ++V+++E+ L Q ++ + + Q+ N + + +
Sbjct: 336 RQQLLLDVIAEKEELKVSQDELTQYLIQGAQQYNMEPNEFVQVLQQN-NQIPAMVGEVAR 394
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFDN---SSESSPEKL 453
+K + +L ++VD + V + +++ E+
Sbjct: 395 NKALAVVLDKAKVVDADGKVVDVTEFTQPVVRDADAPVEEP 435
>gi|87123283|ref|ZP_01079134.1| FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
[Synechococcus sp. RS9917]
gi|86169003|gb|EAQ70259.1| FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
[Synechococcus sp. RS9917]
Length = 460
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 77/439 (17%), Positives = 185/439 (42%), Gaps = 18/439 (4%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-S 61
V G + ++V +P+ R +S+ I + N+ GFR GKVP + + G
Sbjct: 8 VKTTACPGSRLSVEVAVPAARCKESYEAAISRLSRTINLPGFRKGKVPRAVLLQQIGPLR 67
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I + ++ I+ + E + + + A +P + G + + DL + L D+
Sbjct: 68 IRATALESIVDAVWREAIEQENIEALGQPDL---SGGFEPLLEAFDPGKDLTVTLETDVA 124
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDYT 178
P ++ + L+ + D ++D + + K E + + V+ + T
Sbjct: 125 PVPKLKATKGLKAEAESVRFDPSQVDAMLEQSRKQMATLVPVEDRPAANGDVAVVSFEGT 184
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S D +E S ++ + + E ++G+ G++K ++ FPED+ +D G+
Sbjct: 185 YSDDGSAIEGGSADSMDVELEDGQMIPGFVEGILGMAIGEEKTVDCQFPEDYPKEDARGR 244
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K ++K++ + +++ A + ++ + +R +++K +E + +
Sbjct: 245 KASFVITLKDLKTRELPELDDAFAKQASDKDTMAELRQDLEKRLKDDAERRQQSNRHDAL 304
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLAK 355
L + + ++P SLV+ E ++++ + + +++ + D ++ A+
Sbjct: 305 LAALVEQLEVELPASLVQQEVRNLVEQTAGQFAQQGMDVKSLFTPDLVRSLMESSRPEAE 364
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL-AELRA 414
R+ + L + E N++V EEE+++ L + + G P L +
Sbjct: 365 ERLRRSLALSALAEAENLKVEEEEIEAKLKEVKRQLSGERDI-------DPQRLRDAVVD 417
Query: 415 PIFEDKVIDHILKSVQIVD 433
+ DK++ + ++ I +
Sbjct: 418 DLLRDKLLGWLEENSSITE 436
>gi|197123827|ref|YP_002135778.1| trigger factor [Anaeromyxobacter sp. K]
gi|196173676|gb|ACG74649.1| trigger factor [Anaeromyxobacter sp. K]
Length = 429
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 80/436 (18%), Positives = 181/436 (41%), Gaps = 14/436 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + ++R++ + + +R+ + + + ++GFRPGK P ++ +
Sbjct: 1 MKIQVETVSPVERKVTIEVDPDRVAKELDRAYASLSRRVKLRGFRPGKAPRKVLERQFKA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + I+ E E + PS++I +G ++ ++ ++
Sbjct: 61 EVEGEVAERIVTETFTEAVRVESLPVVAPPSVSITDGVAE--------GKPMRYSARVEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P++E + L+VT+ EV ++ + ++ +I + E E++ GD +D+
Sbjct: 113 KPKLEPKDYKGLEVTRKPPEVTDEAVSGELTKIQDSMAQLVPVEGRFEAQEGDWAVIDHE 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + + + V V + E L G K GD E++ FP DH + L GK
Sbjct: 173 GTIDGKPFDGSTAEGVTVKVAPGPITEGNVEALKGKKIGDVVELDEPFPADHRDEALRGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ ++K + + +++ LA G E+ A+R +++ + ++K
Sbjct: 233 TAHMKVTLKALKARQAPSLDDALAKDLGIEGVETLDALRARIRSDLEKREKRRAESELKD 292
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
++ + F+VP +LVE + +L+ + + + A
Sbjct: 293 ALVKAALARNEFEVPPALVERAIDTMLEGAAERFARQGIDIRQLQLDVSRMRADLREQAL 352
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+V ++L I + IEVTEE++++ + K+ + +A L+
Sbjct: 353 LQVRGALLLEAIADAEKIEVTEEDLEAEAARIADELGMPLAKVQQQTRG-KDAREALKNR 411
Query: 416 IFEDKVIDHILKSVQI 431
I E+K + + + I
Sbjct: 412 IREEKALSLLSSAATI 427
>gi|51474009|ref|YP_067766.1| trigger factor [Rickettsia typhi str. Wilmington]
gi|67461734|sp|Q68VS2|TIG_RICTY RecName: Full=Trigger factor; Short=TF
gi|51460321|gb|AAU04284.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Rickettsia typhi str. Wilmington]
Length = 446
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 112/456 (24%), Positives = 224/456 (49%), Gaps = 14/456 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M +I +EGL + P + + + + D+ K + GFR GKVP+S +K YG
Sbjct: 1 MGIIVLKNEGLNFHARISTPLSEIDYDIQKELLDLTKKVKVAGFRVGKVPISIVKKKYGI 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI ++ I++ I +V ++ + + RP I + E D L+ + ++
Sbjct: 61 SIRNDIIEKRINNLVNHVIKEYNLNIIGRPKIEELQNEPD---------KALEFTVKIEL 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP+I I + + + V+ K+++ Q+ ++A + + +T+ + GD+VT+D
Sbjct: 112 LPKITIPDLKKISLDRPKLAVNSKDVEAQLEKLAALTKCYTKESKTKIKDGDQVTIDAIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + ++ + + I+GS L + L+G KTG + ++ FPE++ ++L+GK
Sbjct: 172 YIKDRAFDEGKLNDFKVIIGSNTLIPGFEQQLIGSKTGSKVDVNVTFPENYHARNLSGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
IK V + P V++ + A + S +R +++I+ SE + +K + D
Sbjct: 232 AHFVVQIKAVHTAEPTVIDEEFAKKFQSNSLEELRTHFAKQIENESEEAINTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL+E E N + + + + S +E ++YY+ LA RRV
Sbjct: 292 KLEKLLDFDVPESLLEQEKNILKSET---DKNKHDGSLLNGKSSKEIIEYYNKLALRRVR 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++++ + QQ FPG E + D ++ P A+ LR P ED
Sbjct: 349 IGLLLAEYAKFKNLQLEPDDLKKVIMQQARNFPGQENMIFDFYKNNPRAIEGLRGPALED 408
Query: 420 KVIDHILKS-VQIVDRKVTFDQLFDNSSESSPEKLL 454
K + +I + +Q+ +++ + ++L +++
Sbjct: 409 KTVQYIFNNEIQLKEKRYSKEELEKYLETEEQQRIS 444
>gi|308177636|ref|YP_003917042.1| trigger factor [Arthrobacter arilaitensis Re117]
gi|307745099|emb|CBT76071.1| trigger factor [Arthrobacter arilaitensis Re117]
Length = 443
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 80/443 (18%), Positives = 171/443 (38%), Gaps = 23/443 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P L +E + I + I GFR GKVP I +G+
Sbjct: 1 MKSAVENVNPTRVKLTVEVPYEELKPRVDEAYKTIAQQIQIPGFRKGKVPAKMIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ ++E + E + + + + RP + I E + S EG L L D
Sbjct: 61 GHVIETAVNEGLNEYYQKAMVENELTPLSRPEVDITE----LPSLEKEGEGQLVFTLEVD 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + ++V+ + EV +++I++ + ++ + E + VT+D T
Sbjct: 117 VRPKVELPDYKGIEVSVEAKEVADEDIEKALDDLRGRFGTLKEVEAPAAADSFVTIDLTA 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
SV+ ++ S + + + +GS ++ E + GL G+ E + + AGK
Sbjct: 177 SVEGEEVD--SAQGLSYQIGSGNMLEGMDEAVTGLSAGEDATFETTL----AGGEHAGKT 230
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V N+D A F++ + +R S+ + + + +L
Sbjct: 231 ATVKVVVNAVKQRELPEANDDFAQLASEFDTIAELRKNLSKDAAEGKVVEQGVEARELVL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + VP S+++ + N D EE +R
Sbjct: 291 DKLVELVEVPVPASVIDEQIEQHF----------NAPDAEADHDTEEHRAEVRENTERAF 340
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L + + + V + E+ + Q G++ + + + +
Sbjct: 341 KNEIILDAVADAEEVGVEQSELIDYIVQTAGQYGMEPNQFAQMLDG-AGQVPMMMGEVRR 399
Query: 419 DKVIDHILKSVQIVDRKVTFDQL 441
K + +L+ ++ D + L
Sbjct: 400 RKALAKVLEFAKVTDSNGSVVDL 422
>gi|134302070|ref|YP_001122039.1| trigger factor [Francisella tularensis subsp. tularensis WY96-3418]
gi|166229048|sp|A4IYB7|TIG_FRATW RecName: Full=Trigger factor; Short=TF
gi|134049847|gb|ABO46918.1| trigger factor (peptidyl-prolyl cis/trans isomerase) [Francisella
tularensis subsp. tularensis WY96-3418]
Length = 438
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 98/451 (21%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + ++ I + GFRPGKVP +K YG+
Sbjct: 1 MQVTVEKKEGIHCSLLIEVPANEIDSVVSKEINRTAKTIKMDGFRPGKVPAGMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F + E DKVT+D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQFATFSEVDKVVEKDDKVTIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + ++ I+GS + + ++G+K G+QK I FP+D+ KDLA +
Sbjct: 171 KDGEAFEGGTANDIDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAEAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGVKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E + Q + +M A N + + AK++V
Sbjct: 291 GLREIAEFETPKSLIKREIDAAKQNLLKQMGGAKGFDVN-----QLPDNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K + +K +A L+A + E+
Sbjct: 346 TSLILDSIMNSQEFKAEEAEVESLLDELVQAY-EEPEKTKEQIKKNDKEIANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|219670384|ref|YP_002460819.1| trigger factor [Desulfitobacterium hafniense DCB-2]
gi|219540644|gb|ACL22383.1| trigger factor [Desulfitobacterium hafniense DCB-2]
Length = 426
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 76/436 (17%), Positives = 184/436 (42%), Gaps = 17/436 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + E EL+V + + + + + + + +K NI GFR GK P + ++ G
Sbjct: 1 MSVKMEKIEKNTVELEVTVDAKVFSAAVTKAAKALANKVNIPGFRKGKAPRTMVERYVGT 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ ++ +D+I+ + +++ RP + + + E +L +
Sbjct: 61 AALYNDAVDDILGVEYMKAVNEAGIEPVDRPDVDLIQM---------EDGKELVFKAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++E+ S+ L+V + V ++E+++++ + + ++E + D V +D+
Sbjct: 112 VKPEVELGSYKGLEVEKTAAVVTDEELEQELQRKQEQHAKVLNLEEGTVQAQDTVNIDFA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + + ++GS E L+G + G + ++ FP+++ + DL GK
Sbjct: 172 GSVDGVAFEGGTAEGYDLVIGSGSFIPGFEEQLIGAQIGQEVDVNVRFPDEYHVADLQGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ ++++ A FE+ ++ K+ +E + K I
Sbjct: 232 DALFKVKVNKLKRKEYAPLDDEFAKDISEFETLDELKADLRDKLMTAAEQRAEMEHKNAI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
+ + ++PE++V + + +L + +S + + +
Sbjct: 292 VAKAVENASVEIPEAMVNSRIDMMLDDMAQNLSYQGLDLETYCHYTGTSMDTMREELRPR 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + T +VL I + I V+EEE+ + L + R+ + + + R
Sbjct: 352 ASENLKTELVLEAIAKVEGITVSEEELNNELAKLAERYQTSPENLKQALMA-RGDMGMYR 410
Query: 414 APIFEDKVIDHILKSV 429
+ +K ++ +++
Sbjct: 411 QSLVSEKTVNFLVEQA 426
>gi|242242939|ref|ZP_04797384.1| trigger factor [Staphylococcus epidermidis W23144]
gi|242233540|gb|EES35852.1| trigger factor [Staphylococcus epidermidis W23144]
Length = 433
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 191/441 (43%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGVLTVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + + +P + + + IE D +
Sbjct: 61 EALYQDAVDILLPEAYGEAIEETEISPVAQPEVNVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ ++E+ + + ++ E GD V +D++
Sbjct: 112 VEPEVKLGDYKGLEIEKQETELSDEELQESIDHSLSHLAEMVVKEDGAVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + + +GS E + G+KTGD+K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFDGGQAEGYDLEIGSGSFIPGFEEQIEGMKTGDEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ +N+++A E+ + +++ + K +
Sbjct: 232 EATFKTKVNEIKFKDVPELNDEIANELDSDAENVDEYKENLRKRLSEQKATEAENTEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ + + D+PE+++ E + ++Q+ + Q +E+
Sbjct: 292 AINKATENASIDIPEAMINTELDRMIQEFGQRIQQQGLDLQTYYQISGQNEEQLRDQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I ++ NIEV++E++ L + +F + + +
Sbjct: 352 DAEQRVKTNLTLTAIADEENIEVSDEDIDKELEKMSEQFNISVEDIKSTL----GNTDIV 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVID + + + V+
Sbjct: 408 KNDVRIQKVIDLLRDNAKYVE 428
>gi|187931470|ref|YP_001891454.1| trigger factor [Francisella tularensis subsp. mediasiatica FSC147]
gi|238691553|sp|B2SG17|TIG_FRATM RecName: Full=Trigger factor; Short=TF
gi|187712379|gb|ACD30676.1| trigger factor (TF) protein (peptidyl-prolyl cis/trans isomerase)
[Francisella tularensis subsp. mediasiatica FSC147]
Length = 438
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 98/451 (21%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + ++ I + GFRPGKVP +K YG+
Sbjct: 1 MQVTVEKKEGIHCSLLIEVPANEIDSVVSKEINRTAKTIKMDGFRPGKVPAGMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F + E DKVT+D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQFATFSEVDKVVEKDDKVTIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + ++ I+GS + + ++G+K G+QK I FP+D+ KDLA +
Sbjct: 171 KDGEAFEGGTANDIDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAEAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGVKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E + Q + +M A N + + AK++V
Sbjct: 291 GLREIAEFETPKSLIKREIDAAKQNLLKQMGGAKGFDVN-----QLPDNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K + +K +A L+A + E+
Sbjct: 346 TSLILDSIMNLQEFKAEEAEVESLLDELVQAY-EEPEKTKEQIKKNDKEIANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|260887079|ref|ZP_05898342.1| trigger factor [Selenomonas sputigena ATCC 35185]
gi|330839144|ref|YP_004413724.1| trigger factor [Selenomonas sputigena ATCC 35185]
gi|260863141|gb|EEX77641.1| trigger factor [Selenomonas sputigena ATCC 35185]
gi|329746908|gb|AEC00265.1| trigger factor [Selenomonas sputigena ATCC 35185]
Length = 429
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 78/437 (17%), Positives = 180/437 (41%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + + + L + + + L + + +D+ ++ +I GFR GK P I+ GK
Sbjct: 1 MKVTAEKMDNHEVVLTIEVEAEVLKKAEAKACKDLANRVSIPGFRKGKAPRHIIEQRVGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL D + + + L ++D P I + +E D+ + +
Sbjct: 61 QAILDTAFDAVADKAFADALKEQDVTPVSHPDIEVVT---------LEEGKDVVFKARFT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDY 177
P++ + + +QV + + E+ +++ID+++ + + E + GD VT+D+
Sbjct: 112 AKPEVTLGEYKGIQVEKKVDEITDEDIDKEIESMRRRRSQMVDAAEGAEVKNGDLVTLDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD E K+ +GS + L+G K G+ +++ FPE++ KDLAG
Sbjct: 172 KGFVDGEAFEGGEGKDYPLEIGSNRFIPGFEDQLIGAKIGEARDVNVTFPEEYHSKDLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K + +I + + ++ + F++ +R + ++ ++ K
Sbjct: 232 KPAKFECTIHSIKERQLPELGDEFVKKVSKFQTVDELRADIRKNLEHAAQQKADNDYKVA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+++ + T D+P ++EN ++Q++ + K + + + Y
Sbjct: 292 VIEKATENITVDIPAVMIENRVTMMIQEMAMRLEQQGMKLEQYLQYAGTDLNQIREQYKK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ V T ++L + + +I+V +++ + + ++ K + +L
Sbjct: 352 TAEENVKTDLMLEAVAKAEDIKVEGKDLDDEVAAMALTYGATPAQVRK-VVKEQGRIGDL 410
Query: 413 RAPIFEDKVIDHILKSV 429
+ K IL +
Sbjct: 411 ITTVLRKKTSQFILDNA 427
>gi|145596012|ref|YP_001160309.1| trigger factor [Salinispora tropica CNB-440]
gi|145305349|gb|ABP55931.1| trigger factor [Salinispora tropica CNB-440]
Length = 465
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 87/449 (19%), Positives = 174/449 (38%), Gaps = 23/449 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + L + +P L S + +I + + GFR GKVP + I G+
Sbjct: 19 KSTVETLSPTRVRLAIEVPFVELEPSLKKAYREIGQQVQVPGFRRGKVPAAVIDQRVGRG 78
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L+E + E I + + + + D + RP + I E L DI
Sbjct: 79 TVLNEAVQEAIPQNILAAVREHDLKTLGRPEVEITE---------FADGDSLNFTAEVDI 129
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + ++VT D ++D+ EID Q+ + + + E + GD V +D +
Sbjct: 130 RPELTLPDLSTVEVTVDELKIDDSEIDEQVQSLRERFATLKTVERAAGEGDFVQIDLNAT 189
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + S N+ VGS L E +VGL G F D AG+
Sbjct: 190 VDGEEVPGGSASNLSHEVGSKQLLPGLDEAVVGLAAG----ASTTFTTQLVGGDYAGRDA 245
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ +++ V ++++ A F++ + +R S+++ Q + + L+
Sbjct: 246 EVSVTVRTVKEKELPQLDDEFAELASEFDTMAELRDDVSERVTQGKRVEQIYAARDKALE 305
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----AK 355
I PE +V E + ++ + + +E+ + A
Sbjct: 306 QIVEATEVPAPEGVVREEVESRKAAMVDQLERVGASMEEYLAAEEKTEEQIDTELTEAAT 365
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ V ++L T+ + I+V+++E + + R ++ D + A +
Sbjct: 366 QGVKIQLLLDTVADAEEIQVSDDEFGHEIVHRAQRAGVAPQQFYDQLVRS-GAAGAVYGD 424
Query: 416 IFEDKVIDHILKSVQIVD---RKVTFDQL 441
+ K + I+ + I D V+ D L
Sbjct: 425 VRRGKALASIMDRITIKDAAGEAVSLDAL 453
>gi|328907726|gb|EGG27490.1| trigger factor [Propionibacterium sp. P08]
Length = 481
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 84/486 (17%), Positives = 190/486 (39%), Gaps = 29/486 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSTLEKLSTHRVKLTIEMPFDELKPSLDKAYKDIAAQVNVPGFRKGKVPAPIIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAVEENTVVPLGQPEIEVT---------RLEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV ++++D ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVAAISVEVPAVEVPDEDVDERIETLRQRFATNTEVERAAAKDDLVTIDLIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LE+ + +V + VGS + E + GLK G+ E F L G+
Sbjct: 172 TRDGETLEEATASDVTYKVGSEGMLEGLDEAVTGLKAGESAE----FHSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADVKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P +L+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPANLIDSELEARRQQVNQQLTEAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD------NSSESSPEKLLDKSSKVETFQS 465
I K + ++ + + D K +L + E + E + S +
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADEPAEEDAPGEDSAEKVDDK 466
Query: 466 EEAPSE 471
A +
Sbjct: 467 AAATKK 472
>gi|302671764|ref|YP_003831724.1| trigger factor Tig [Butyrivibrio proteoclasticus B316]
gi|302396237|gb|ADL35142.1| trigger factor Tig [Butyrivibrio proteoclasticus B316]
Length = 485
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 83/437 (18%), Positives = 182/437 (41%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + + +++L + + E ++K + GFR GK P I+ +YGK
Sbjct: 1 MSVTVEKLEKSMAKLKITVSADQLEKAMQKAYEKNKNKIQLPGFRKGKAPRKMIEQMYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +E+I+E P+ + + E P I + + IE D
Sbjct: 61 GVFYEDAANELIEEEYPKAVEECGESVVSSPKIDVEQ---------IEAGKDFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P +++ + ++V + EV ++++D ++ + N + + GD VT+D+
Sbjct: 112 LKPPVKLGKYKGVEVPKMDVEVTDEDVDAEIDKQRNTNARTVDVTDRAVKDGDIVTLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V + + +GS E LVG + G + ++ FPED+ +DLAGK
Sbjct: 172 GFVDGVAFQGGKGTDYPLTIGSGAFIPGFEEQLVGFEIGKEGDVNVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + + +N++ A F++ + + K+ + + K + +
Sbjct: 232 AATFKCTVKAIKAKELPELNDEFASDVSDFDTLAEYKEDVKNKLVERKTADEKAKREDLV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ + ++PE+++E + I+ + ++ L+
Sbjct: 292 VKAVIEDSEMELPEAMIETQQRQIVNDFAQRLQMQGMNFDQYMQYTGNTVDKMLEQVRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R+ +VL + E I V++E+ + L + ++ K+ L +R
Sbjct: 352 AIERIQARLVLEAVAEAEKITVSDEDFDAELNKMAEQYKMEADKLKGLMGDAE--LKTMR 409
Query: 414 APIFEDKVIDHILKSVQ 430
+ K D ++++V+
Sbjct: 410 EDLTVQKAADFLVENVK 426
>gi|314919379|gb|EFS83210.1| trigger factor [Propionibacterium acnes HL050PA1]
Length = 530
Score = 198 bits (502), Expect = 2e-48, Method: Composition-based stats.
Identities = 83/482 (17%), Positives = 187/482 (38%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV +++++ ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVNERVETLRQRFATNTEVERAAAKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LED + V + VGS + E + GLK G+ E F L G+
Sbjct: 172 TRDGEALEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAE----FHSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLHQAADAPDKGL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ +K ++P SL+++E Q+V +++ A + ++
Sbjct: 288 GEVISKIDIELPTSLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I K + ++ + + D K +L + + + +E+A +
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSAEKADGK 466
Query: 472 IS 473
+
Sbjct: 467 AT 468
>gi|241668322|ref|ZP_04755900.1| trigger factor [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254876855|ref|ZP_05249565.1| cell division trigger factor protein [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254842876|gb|EET21290.1| cell division trigger factor protein [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 438
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 92/451 (20%), Positives = 206/451 (45%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + + I + GFRPGKVP ++ YG+
Sbjct: 1 MQVTVEKKEGIHCSLLIEVPANEVDSIVTKEINKTAKTIKMDGFRPGKVPAGMVEKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKKGEPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F E + DKV +D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQLATFSEVERAVQKDDKVVIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D + E S + + ++GS + + ++G+ QK I FPE++ KDLAGK+
Sbjct: 171 RDGEVFEGGSANDQELVIGSGQMIPGFEDGIIGMNKDQQKTITVTFPEEYQNKDLAGKEA 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ V+++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQEAQLPEVDDEFVAKFGVKGGVDTFEDEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P++L++ E + Q + +M N + + AK++V
Sbjct: 291 GLREIAEFETPKALIKREIDAAKQNLVKQMGGGQNFDVN-----QLPDNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I E + + E++S L + + + +K + +K ++ L+ + E+
Sbjct: 346 TSLILDSIIESQKFQAEDAEVESLLDELVQAY-EEPEKTKEQIKKNDREISNLKGLVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L Q+ +++ F ++ + ++
Sbjct: 405 KLTDWVLSQAQVTEKQEDFFEVIKENMQAQQ 435
>gi|315658063|ref|ZP_07910935.1| trigger factor [Staphylococcus lugdunensis M23590]
gi|315496392|gb|EFU84715.1| trigger factor [Staphylococcus lugdunensis M23590]
Length = 435
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 86/448 (19%), Positives = 196/448 (43%), Gaps = 21/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLTVTVPAEKVNKALDKAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + + +P + + + IE D + +
Sbjct: 61 EALYQDAVDILLPEAYGEAIEETGIKPVDQPEVNVTQ---------IEKGKDFEFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++E+ + L++ + E+ ++E+ + + ++ E GD V +D++
Sbjct: 112 VEPEVELGDYKGLEIEKQETELTDEELQESIDHSLSHLADMVVKEDGVVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + +GS E L GLKTG++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEAFEGGQAEKYDLEIGSGSFIPGFEEQLEGLKTGEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ I E+ +++++A L E S + +++ + E K +
Sbjct: 232 EATFKTKINEIKFKEVPELDDEIANELDSEANSVDEYKENLRKRLAEQKETNAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ + D+P++++ E + ++Q+ + Q + + +
Sbjct: 292 AINKATENAKIDIPQAMINTELDRMVQEFAQRIQQQGLDLQTYFQISGQDESQMREQMKG 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I + NIEV+EE++ L + +F + + + +
Sbjct: 352 DAEQRVKTNLTLTAIADAENIEVSEEDIDKELEKMSSQFNLSVEDIKNTL----GNTDII 407
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
+ + KVID + + ++V+ K +
Sbjct: 408 KNDVRIQKVIDLLRDNAKLVEAKSEDKE 435
>gi|293376037|ref|ZP_06622290.1| trigger factor [Turicibacter sanguinis PC909]
gi|325844607|ref|ZP_08168250.1| trigger factor [Turicibacter sp. HGF1]
gi|292645338|gb|EFF63395.1| trigger factor [Turicibacter sanguinis PC909]
gi|325489032|gb|EGC91419.1| trigger factor [Turicibacter sp. HGF1]
Length = 427
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 85/437 (19%), Positives = 181/437 (41%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + E K +L + I + + + + + + GFR GK+P + +G
Sbjct: 1 MAVKVETVETNKVKLTMTISAESFDKALDTAFKKVSKNLAVPGFRKGKMPRQMFEQKFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ++ ++ + + + + PS I + I +L +
Sbjct: 61 EALYEDALEVVLPGAYMQAIQETNIAPVAAPSWDIEQ---------IGKGQELIASATVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + ++V + +V E+++ ++ + + VK+ E GD +DY
Sbjct: 112 VKPEVELGQYAGIEVEKLSTDVTEEDVQSELNGLLERQAEIVVKDGAVENGDTAVIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D V E +N ++GS E L+G+ G++KEI FPE + DLAG +
Sbjct: 172 FKDGVAFEGGKGENHPLVIGSNSFIPGFEEQLIGMTAGEEKEINVTFPEAYHSADLAGAE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV---RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++ R G E+ ++ + IK+ E R V
Sbjct: 232 ATFKVKVHEVKTRELPQLDDEFVKDLDRDGIETVEELKADLEKVIKERKETAARNHVIDT 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
+++ + FD+P +++ E ++++ Q + E
Sbjct: 292 VVEKATENAKFDIPVEMIDAEVAQMVKEAEQRFQMQGFNLDLYFQFTGTDLEGFKAQLRP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++R+ + L I + NI+VTEEE+ + L + G + +++ LA L
Sbjct: 352 EAEKRLSYNLTLEAIVKAENIDVTEEEVDAKLVEIAGAYGRDVQELKAALPS----LAML 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ + K +D I++
Sbjct: 408 KEDLKVQKAVDFIVEKA 424
>gi|220918592|ref|YP_002493896.1| trigger factor [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956446|gb|ACL66830.1| trigger factor [Anaeromyxobacter dehalogenans 2CP-1]
Length = 429
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 80/436 (18%), Positives = 181/436 (41%), Gaps = 14/436 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + ++R++ + + +R+ + + + ++GFRPGK P ++ +
Sbjct: 1 MKIQVETVSPVERKVTIEVDPDRVAKELDRAYASLSRRVKLRGFRPGKAPRKVLERQFKT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + I+ E E + PS++I +G ++ ++ ++
Sbjct: 61 EVEGEVAERIVTETFTEAVRVESLPVVAPPSVSITDGVAE--------GKPMRYSARVEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P++E + L+VT+ EV ++ + ++ +I + E E++ GD +D+
Sbjct: 113 KPKLEPKDYKGLEVTRKPPEVTDEAVSGELTKIQDSMAQLVPVEGRFEAQEGDWAVIDHE 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + + + V V + E L G K GD E++ FP DH + L GK
Sbjct: 173 GTIDGKPFDGSTAEGVTVKVAPGPITEGNVEALKGKKIGDVVELDEPFPADHRDEALRGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ ++K + + +++ LA G E+ A+R +++ + ++K
Sbjct: 233 TAHMKVTLKALKARQAPSLDDALAKDLGIEGVETLDALRARIRSDLEKREKRRAESELKD 292
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
++ + F+VP +LVE + +L+ + + + A
Sbjct: 293 ALVKAALARNEFEVPPALVERAIDTMLEGAAERFARQGIDIRQLQLDVSRMRADLREQAL 352
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+V ++L I + IEVTEE++++ + K+ + +A L+
Sbjct: 353 LQVRGALLLEAIADAEKIEVTEEDLEAEAARIADELGMPLAKVQQQTRG-KDAREALKNR 411
Query: 416 IFEDKVIDHILKSVQI 431
I E+K + + + I
Sbjct: 412 IREEKALSLLSSAATI 427
>gi|303328064|ref|ZP_07358503.1| trigger factor [Desulfovibrio sp. 3_1_syn3]
gi|302861890|gb|EFL84825.1| trigger factor [Desulfovibrio sp. 3_1_syn3]
Length = 454
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 85/463 (18%), Positives = 198/463 (42%), Gaps = 11/463 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +K+++ + + + + ++ + GFR GKVP S I+ +
Sbjct: 1 MEYSAEDLSPVKKKIVITTEPQEVEAAIMGAVALYKTSVQLDGFRKGKVPASVIEQRFRD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E ++I + E++ D + ++ + +E + +++
Sbjct: 61 KIYEEARQDLINVHINEVMQNLDVQPLSGINVD--------GAEALERGKGYTYSIEFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE--IGDKVTVDYT 178
LP ++ ++ ++V Q+ EV E+E+ + I ++ + G ++D+
Sbjct: 113 LPTFDLPPYEGMEVEQEKVEVKEQEVADVIERIRRDRAQLVPVDGAGPAVDGQVASIDFA 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ LE +N +G + ++ + G + E E FP+D KDLAGK
Sbjct: 173 AYENGQPLEGVKAENFDLALGEHQALEDFEALVKTIPYGQEGEGEIRFPDDFIAKDLAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V + + V +N+DLA LG ++ ++ ++ Q E L + ++ +L
Sbjct: 233 TVTMKVKVHAVKERKLPELNDDLAKSLGLDNVDKLKETITRSYTQSRENLNKSAAQKTML 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + F +PESL++ + +L ++ + + +++ EE + A+
Sbjct: 293 DRLLKMVDFPLPESLLDIQMRTLLTDLKARLERQGKGLESLGKSPEELRKEMLPQAEELA 352
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++L +I +K +EV+++E+ + +YQ+ R K + + +++ + LR +
Sbjct: 353 RIQVLLLSIAKKEGLEVSDQEVNTHIYQESLRSGEDFKALRESYERS-GLIFVLRDRLLA 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVE 461
DK +D I ++ + + + D +E+ E + + +
Sbjct: 412 DKAMDRIYAKAKVTEVEPREPRTGDGDAETPAEAPAESKEETK 454
>gi|159039409|ref|YP_001538662.1| trigger factor [Salinispora arenicola CNS-205]
gi|189035951|sp|A8M1L0|TIG_SALAI RecName: Full=Trigger factor; Short=TF
gi|157918244|gb|ABV99671.1| trigger factor [Salinispora arenicola CNS-205]
Length = 448
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 83/459 (18%), Positives = 175/459 (38%), Gaps = 23/459 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L + +P L S + +I + + GFR GKVP I G+
Sbjct: 1 MKSTVETLSPTRVRLAIEVPFVELEPSLKKAYREIGQQVQVPGFRRGKVPAVVIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L+E + E I + + + + D + RP + I E L D
Sbjct: 61 GTVLNEAVQEAIPQNILAAVREHDLKTLGRPEVEITE---------FTDGDSLNFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++ + ++VT D ++D+ EID Q+ + + + + + GD V +D
Sbjct: 112 VRPELTLPDLSTVEVTVDELKIDDSEIDEQVQSLRERFATLKTVDRAAGEGDFVQIDLNA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + S N+ VGS L E +VGL G F D AG+
Sbjct: 172 TVDGEEVPGGSASNLSHEVGSKQLLPGLDEAVVGLAAG----ASTTFTTQLVGGDHAGRD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +++ V ++++ A F++ + +R +++ + + + L
Sbjct: 228 AEVSVTVRTVKEKELPELDDEFAELASEFDTMAELRDDVRERVTRGKRVEQIYAARDKAL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----A 354
+ I PE +V E + ++ + + +E+ + A
Sbjct: 288 EQIVEAADVPAPEGVVREEVESRKTAMVDQLERIGASMEEYLAAEEKTEEQIDTELNEAA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V ++L T+ + +++V+++E + + R ++ D + A +
Sbjct: 348 VQGVKIQLLLDTVADAEDVQVSDDEFGHEIVHRAQRAGVAPQQFYDQLVRS-GAAGAVYG 406
Query: 415 PIFEDKVIDHILKSVQIVD---RKVTFDQLFDNSSESSP 450
+ K + I+ + I D V+ D L +
Sbjct: 407 DVRRGKALASIMDRITIRDAAGEPVSLDALRAENEAEHA 445
>gi|153006265|ref|YP_001380590.1| trigger factor [Anaeromyxobacter sp. Fw109-5]
gi|171769312|sp|A7HFW0|TIG_ANADF RecName: Full=Trigger factor; Short=TF
gi|152029838|gb|ABS27606.1| trigger factor [Anaeromyxobacter sp. Fw109-5]
Length = 430
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 81/436 (18%), Positives = 185/436 (42%), Gaps = 14/436 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + ++R++ + + +R+ + + ++GFRPGK P ++ +
Sbjct: 1 MKIQVENVSPVERKVSIEVDPDRVAQELERAYAGLGRRVKLRGFRPGKAPRKVLERQFRA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ SE +++I+++ E + P ++++EG +D ++ ++
Sbjct: 61 EVESEVLEKIVQQTFAEAVKVESLPLVAPPHVSVSEGVAD--------GKPIRYTARVEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P I + L+VT+ EV ++ + +++ + + E E++ D +D+
Sbjct: 113 KPAIAPKDYRGLEVTRKAPEVTDQMVSDELSRLQDSLAQLVPVEGRFEAQEDDWAVIDHE 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D E + V V + E L G K G+ E++ FPEDH ++ L GK
Sbjct: 173 GTIDGKPFEGGKAEGVTVKVAPGAISDGNLEALKGKKLGETVELDEPFPEDHRVEQLRGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ ++K + + +++ LA G E+ A+R +++ + +VK
Sbjct: 233 TAHMKVTLKALKTRQLPALDDALAKEAGVEGIETLDALRARIRADLEKREKRRAESEVKD 292
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
++ K F+VP +LVE + +L+ + + + ++ + A
Sbjct: 293 ALVKAALAKNEFEVPPALVERAIDSMLEGAAERFARSGIDIRRLELDFAKMRADMREQAL 352
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+V ++L I + IEVT+E++Q+ + K+ + +A L+
Sbjct: 353 LQVRGALLLEAIADAEKIEVTDEDLQAEAARIAEELGAPLAKVQQQMRG-KDAREALKNK 411
Query: 416 IFEDKVIDHILKSVQI 431
+ EDK + + + I
Sbjct: 412 VREDKALALLSSAANI 427
>gi|323489954|ref|ZP_08095175.1| trigger factor (TF) [Planococcus donghaensis MPA1U2]
gi|323396250|gb|EGA89075.1| trigger factor (TF) [Planococcus donghaensis MPA1U2]
Length = 428
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 84/441 (19%), Positives = 178/441 (40%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L V +P+ + ++ + + + N+ GFR GK+P + +G
Sbjct: 1 MSAKWEKQEGNTGILTVEVPAEEVNAGLDKAFKKVVKEINVPGFRKGKMPRQMFEKRFGA 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + + + RP I I IE L
Sbjct: 61 ESLYQDALDFILPDAYANAVEEAGINPVDRPEIDIET---------IEKNQPLVFTAKVI 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++E+ + L+ ++ EV +++I++Q+ E + ++ GD +D+
Sbjct: 112 VKPEVELGEYKGLEASKPDTEVTDEDIEKQLKENQERLAELTVKEDEAIVEGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +GS E LVG+K G++K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGQGNDYSLEIGSNSFIPGFEEQLVGVKAGEEKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV +N++LA ES A+R + + K++ +
Sbjct: 232 AATFKVKVNEVKGKELPELNDELAKEIDPEVESLEALRTKMKDSLVAEKKSAADAKLRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ + T D+P +++ E + ++ ++ + + + H
Sbjct: 292 LVQKAAENATIDIPHAMIHTEMDRMMSDFEQRLTQQGMNLELYYQFSGQDEAALREQMHG 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ RV + L I + N++VT E++ L + +F +++ L
Sbjct: 352 DAETRVRVSMTLEAIAKAENMQVTSEDIDKELEKMAAQFNMDIEQIKTAL----GGTEML 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
I ++ ++ + +I +
Sbjct: 408 ENDIRMQNTVEFLVDNAKISE 428
>gi|86159773|ref|YP_466558.1| trigger factor [Anaeromyxobacter dehalogenans 2CP-C]
gi|119370878|sp|Q2IEW0|TIG_ANADE RecName: Full=Trigger factor; Short=TF
gi|85776284|gb|ABC83121.1| trigger factor [Anaeromyxobacter dehalogenans 2CP-C]
Length = 429
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 79/436 (18%), Positives = 180/436 (41%), Gaps = 14/436 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + ++R++ + + +R+ + + + ++GFRPGK P ++ +
Sbjct: 1 MKIQVETVSPVERKVTIEVDPDRVAKELDRAYASLSRRVKLRGFRPGKAPRKVLERQFKA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + I+ E E + PS++I +G ++ ++ ++
Sbjct: 61 EVEGEVAERIVTETFTEAVRVESLPVVAPPSVSITDGVAE--------GKPMRYSARVEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P++E + L+VT+ EV ++ + ++ +I + E E++ GD +D+
Sbjct: 113 KPKLEPKDYKGLEVTRKPPEVTDESVSAELTKIQDSMAQLVAVEGRFEAQEGDWAVIDHE 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + + + V V + E L G K GD E++ FP DH + L GK
Sbjct: 173 GTIDGKPFDGSTAEGVTVKVAPGPITEGNVEALKGKKIGDTVELDEPFPADHRDEALRGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ ++K + +++ LA G E+ A+R +++ + ++K
Sbjct: 233 TAHMKVTLKALKVRQAPALDDALAKELGIEGVETLDALRTRIRSDLEKREKRRAESELKD 292
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
++ K F+VP +LVE + +++ + + + A
Sbjct: 293 ALVKAALAKNEFEVPPALVERAIDTMIEGAAERFARQGIDLRQLQLDVSRMRADLREQAL 352
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+V ++L I + +EVTEE++++ + K+ + +A L+
Sbjct: 353 LQVRGALLLEAIADAEKVEVTEEDLEAEAARIADELGMPLAKVQQQTRG-KDAREALKNR 411
Query: 416 IFEDKVIDHILKSVQI 431
I E+K + + + I
Sbjct: 412 IREEKALSLLSSAATI 427
>gi|89895951|ref|YP_519438.1| hypothetical protein DSY3205 [Desulfitobacterium hafniense Y51]
gi|119370876|sp|Q24SJ8|TIG1_DESHY RecName: Full=Trigger factor 1; Short=TF 1
gi|89335399|dbj|BAE84994.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 426
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 76/436 (17%), Positives = 184/436 (42%), Gaps = 17/436 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + E EL+V + + + + + + + +K NI GFR GK P + ++ G
Sbjct: 1 MSVKMEKIEKNTVELEVTVDAKVFSAAVTKAAKALANKVNIPGFRKGKAPRTMVERYVGT 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ ++ +D+I+ + +++ RP + + + E +L +
Sbjct: 61 AALYNDAVDDILGVEYMKAVNEAGIEPVDRPDVDLIQM---------EDGKELVFKAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++E+ S+ L+V + V ++E+++++ + + ++E + D V +D+
Sbjct: 112 VKPEVELGSYKGLEVEKTAAVVTDEELEQELQRKQEQHAKVLNLEEGTVQAQDTVNIDFA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + + ++GS E L+G + G + ++ FP+++ + DL GK
Sbjct: 172 GSVDGVAFEGGTAEGYDLVIGSGSFIPGFEEQLIGAQIGQEVDVNVRFPDEYHVADLQGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ ++++ A FE+ ++ K+ +E + K I
Sbjct: 232 DALFKVKVNKLKRKEYAPLDDEFAKDISEFETLDELKADLRDKLMTAAEQRAEMEQKNAI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
+ + ++PE++V + + +L + +S + + +
Sbjct: 292 VAKAVENASVEIPEAMVNSRIDMMLDDMAQNLSYQGLDLETYCHYTGTSMDTMREELRPR 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + T +VL I + I V+EEE+ + L + R+ + + + R
Sbjct: 352 ASENLKTELVLEAIAKVEGITVSEEELNNELAKLAERYQTSPENLKQALMA-RGDMGMYR 410
Query: 414 APIFEDKVIDHILKSV 429
+ +K ++ +++
Sbjct: 411 QSLVSEKTVNFLVEQA 426
>gi|313822074|gb|EFS59788.1| trigger factor [Propionibacterium acnes HL036PA1]
gi|313823692|gb|EFS61406.1| trigger factor [Propionibacterium acnes HL036PA2]
gi|314924770|gb|EFS88601.1| trigger factor [Propionibacterium acnes HL036PA3]
Length = 530
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 83/482 (17%), Positives = 189/482 (39%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV ++++D ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAAKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LED + V + VGS + E + GLK G+ E L G+
Sbjct: 172 TRDGEALEDATASGVTYQVGSEGMLEGLDEAVTGLKAGESAEF----HSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P SL+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPTSLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I K + ++ + + D K +L + + + +E+A +
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSAEKADGK 466
Query: 472 IS 473
+
Sbjct: 467 AT 468
>gi|167628596|ref|YP_001679095.1| trigger factor [Heliobacterium modesticaldum Ice1]
gi|167591336|gb|ABZ83084.1| trigger factor [Heliobacterium modesticaldum Ice1]
Length = 461
Score = 197 bits (500), Expect = 3e-48, Method: Composition-based stats.
Identities = 69/436 (15%), Positives = 176/436 (40%), Gaps = 17/436 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + E + L + I + + + + + GFR GK P +++ YGK
Sbjct: 32 KASVERLENNQVSLQIEIDEATFEQGLEKAYKKVVRQVAVPGFRKGKTPRKILEARYGKE 91
Query: 62 IL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
IL + ++ I+ + + +++ + +P I + + IE L + +
Sbjct: 92 ILFEDAVEFIVPDAYKQAIAEHNVEPVEQPKIDVIQ---------IEAGKPLIFKALVTV 142
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTV 179
P++ + + ++V EV E+++ RQ+ + K + E E+++GD +D+
Sbjct: 143 KPEVVLGEYKGIEVEVQPVEVREEDVQRQLETMQKRHARLITLTEGEAQMGDTAVIDFEG 202
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D + + +GS E LVG+ G+ ++ FPE + +++LAG+
Sbjct: 203 FKDGLSFPGGKGTDHPLELGSNTFIPGFEEGLVGVSVGETVDLHLTFPEQYHVEELAGQP 262
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V ++KE+ ++++ A FE+ ++ + + +E Q + ++
Sbjct: 263 VLFKVTVKELKRKEYAPIDDEFAKDVSDFETLDELKEDIRKNLMSAAEKAREQAKRNAVV 322
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN----VDSIDEEDLQYYHMLA 354
+ + D+P ++++ + +L++ + + ++ + A
Sbjct: 323 EKVVGASQVDIPMVMIDSRVDQMLEEYGHRLRYQGISMEQFLAMTKQTQKDLKAQFIPEA 382
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V +VL + + + V++EE+ + + + ++ + + L
Sbjct: 383 EKVVKEELVLEAVAKAEGMSVSDEELNKEIEEMAANYRKPADQIRK-ILESRGQIDALTE 441
Query: 415 PIFEDKVIDHILKSVQ 430
I K ++ S +
Sbjct: 442 GILLKKAAKFLVDSAK 457
>gi|313763506|gb|EFS34870.1| trigger factor [Propionibacterium acnes HL013PA1]
gi|314920713|gb|EFS84544.1| trigger factor [Propionibacterium acnes HL050PA3]
gi|327454885|gb|EGF01540.1| trigger factor [Propionibacterium acnes HL087PA3]
gi|328755282|gb|EGF68898.1| trigger factor [Propionibacterium acnes HL087PA1]
Length = 530
Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats.
Identities = 82/482 (17%), Positives = 189/482 (39%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV +++++ ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVNERVETLRQRFATNTEVERAAAKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LED + V + VGS + E + GLK G+ E L G+
Sbjct: 172 TRDGEALEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEF----HSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P SL+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPTSLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I K + ++ + + D K +L + + + +E+A +
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSAEKADGK 466
Query: 472 IS 473
+
Sbjct: 467 AT 468
>gi|56707748|ref|YP_169644.1| trigger factor [Francisella tularensis subsp. tularensis SCHU S4]
gi|110670219|ref|YP_666776.1| trigger factor [Francisella tularensis subsp. tularensis FSC198]
gi|224456818|ref|ZP_03665291.1| trigger factor [Francisella tularensis subsp. tularensis MA00-2987]
gi|254370251|ref|ZP_04986257.1| trigger factor [Francisella tularensis subsp. tularensis FSC033]
gi|254874561|ref|ZP_05247271.1| trigger factor [Francisella tularensis subsp. tularensis MA00-2987]
gi|67461648|sp|Q5NH48|TIG_FRATT RecName: Full=Trigger factor; Short=TF
gi|123359554|sp|Q14IK0|TIG_FRAT1 RecName: Full=Trigger factor; Short=TF
gi|56604240|emb|CAG45256.1| trigger factor (TF) protein (peptidyl-prolyl cis/trans isomerase)
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110320552|emb|CAL08639.1| trigger factor (TF) protein (peptidyl-prolyl cis/trans isomerase)
[Francisella tularensis subsp. tularensis FSC198]
gi|151568495|gb|EDN34149.1| trigger factor [Francisella tularensis subsp. tularensis FSC033]
gi|254840560|gb|EET18996.1| trigger factor [Francisella tularensis subsp. tularensis MA00-2987]
gi|282158919|gb|ADA78310.1| trigger factor [Francisella tularensis subsp. tularensis NE061598]
Length = 438
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 99/451 (21%), Positives = 209/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EG+ L + +P+N + ++ I + GFRPGKVP +K YG+
Sbjct: 1 MQVTVEKKEGIHCSLLIEVPANEIDSVVSKEINRTAKTIKMDGFRPGKVPAGMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F + E DKVT+D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQFATFSEVDKVVEKDDKVTIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + ++ I+GS + + ++G+K G+QK I FP+D+ KDLA +
Sbjct: 171 KDGEAFEGGTANDIDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAEAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGVKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E + Q + +M A N S + AK++V
Sbjct: 291 GLREIAEFETPKSLIKREIDAAKQNLLKQMGGAKGFDVNQLS-----DNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K + +K +A L+A + E+
Sbjct: 346 TSLILDSIMNSQEFKAEEAEVESLLDELVQAY-EEPEKTKEQIKKNDKEIANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|289428777|ref|ZP_06430460.1| trigger factor [Propionibacterium acnes J165]
gi|289158175|gb|EFD06395.1| trigger factor [Propionibacterium acnes J165]
gi|313808035|gb|EFS46516.1| trigger factor [Propionibacterium acnes HL087PA2]
gi|313826016|gb|EFS63730.1| trigger factor [Propionibacterium acnes HL063PA1]
gi|314978948|gb|EFT23042.1| trigger factor [Propionibacterium acnes HL072PA2]
gi|314986609|gb|EFT30701.1| trigger factor [Propionibacterium acnes HL005PA2]
gi|314990966|gb|EFT35057.1| trigger factor [Propionibacterium acnes HL005PA3]
gi|315089230|gb|EFT61206.1| trigger factor [Propionibacterium acnes HL072PA1]
gi|327329649|gb|EGE71405.1| trigger factor [Propionibacterium acnes HL096PA3]
gi|327446334|gb|EGE92988.1| trigger factor [Propionibacterium acnes HL013PA2]
gi|328752476|gb|EGF66092.1| trigger factor [Propionibacterium acnes HL020PA1]
gi|332676001|gb|AEE72817.1| trigger factor [Propionibacterium acnes 266]
Length = 530
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 83/482 (17%), Positives = 189/482 (39%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV ++++D ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAAKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LED + V + VGS + E + GLK G+ E L G+
Sbjct: 172 TRDGEALEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEF----HSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P SL+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPTSLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I K + ++ + + D K +L + + + +E+A +
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSAEKADGK 466
Query: 472 IS 473
+
Sbjct: 467 AT 468
>gi|315083635|gb|EFT55611.1| trigger factor [Propionibacterium acnes HL027PA2]
Length = 530
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 83/482 (17%), Positives = 189/482 (39%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV ++++D ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAAKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LED + V + VGS + E + GLK G+ E L G+
Sbjct: 172 TRDGEALEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEF----HSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P SL+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPTSLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I K + ++ + + D K +L + + + +E+A +
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDPAEKADGK 466
Query: 472 IS 473
+
Sbjct: 467 AT 468
>gi|317124501|ref|YP_004098613.1| trigger factor [Intrasporangium calvum DSM 43043]
gi|315588589|gb|ADU47886.1| trigger factor [Intrasporangium calvum DSM 43043]
Length = 468
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 88/474 (18%), Positives = 186/474 (39%), Gaps = 32/474 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P L S + I+ I + GFR GKVP I+ G+
Sbjct: 1 MKSALETLSPTRVKLTVEVPFEELKPSLDAAIKHIGEHVQVPGFRKGKVPARIIEQRVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E ++ + ++ L + D R +P IT + + D D
Sbjct: 61 AAVLEEAVNNALPDLYGRALEENDVRPLGQPEITDLKVPA-------TDGEDFSFTAEVD 113
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P+IE+ F D+++T D V + ++ ++ + + + + GD V++D +
Sbjct: 114 RRPEIELPDFSDIELTVDEAVVSDDDVAERLDALRARFGTLKGVDRPVQDGDFVSIDLSA 173
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ + V + VGS ++ E LVG+ + K F + D G++
Sbjct: 174 EIDGEEIDAVNG--VSYEVGSKNMLEGMDEALVGMAADETKS----FVAPLAGGDQEGRE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ V ++++ A F++ ++ +QK + ++F + Q+L
Sbjct: 228 ANCTVTVLAVKERELPELDDEFAQLASEFDTLEELKADLTQKAEVDAKFAQGVSARDQLL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D I + +PE +VE E N L+ D+E ++ +
Sbjct: 288 DAILGRVEVPIPEGIVEAEVNSHLEG-------------EGRLEDDEHRAEVDESTRKGL 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T ++L I E+ ++V + E+ L ++ K + + A +
Sbjct: 335 KTQLLLDAIAEREEVQVQQAELIEFLVMNAQQYGMDPNAFAQTLDK-EGQIPAMVAEVAR 393
Query: 419 DKVIDHILKSVQIVDRK---VTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
K + +L+ V + D V ++ + E + ++ ++ EA
Sbjct: 394 RKALASVLEKVSVKDTAGNVVDLNEAVPGTEADEDEPVDAEADGAGDIEAAEAQ 447
>gi|212704615|ref|ZP_03312743.1| hypothetical protein DESPIG_02678 [Desulfovibrio piger ATCC 29098]
gi|212672014|gb|EEB32497.1| hypothetical protein DESPIG_02678 [Desulfovibrio piger ATCC 29098]
Length = 481
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 84/439 (19%), Positives = 187/439 (42%), Gaps = 10/439 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ +K+++ + + + + ++ I GFR GKVP S I+ + I
Sbjct: 45 TVEDLSPVKKKVAITTDPKEVEAAIMGAVALYKTSVQIDGFRKGKVPASVIEQRFRDRIY 104
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E +++ + E++SK + ++ E ++E + + +++LP
Sbjct: 105 EEARQDLVNVHINEVMSKLNVTPVSGINMVDGE-------PVMERGKGMNYSIEFEVLPT 157
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYTVSV 181
++ ++ ++V Q+ VD+ E++ + I ++ + + G +D+
Sbjct: 158 FDLPPYEGMEVEQEKTIVDDAEVEEVVERIRRDRAKLVPVDGDGPAVDGQVANIDFCAYE 217
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
+ LE +G + ++ +K G + E + FPED KDLAGK V
Sbjct: 218 NGQPLEGIKADGFDLALGEKQALEDFENLVKTIKLGCEAEGDITFPEDFLAKDLAGKTVT 277
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
+ + + V+++LA +G E+ ++ + + L + ++ +LD +
Sbjct: 278 MKVKVHAIKERQLPAVDDELAKAVGVENVEKLKAGIRESYRSSRYNLNKGSAQKSMLDKL 337
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
F++P S+V+ + +L +R M + ++ +EE L+ A+
Sbjct: 338 VKMVEFELPPSMVDVQARTLLADMRARMERQGKSLDSLGKTEEELLKEVQPQAEEITRMQ 397
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++L I +K ++V E+E+ + LYQ R K++ + ++K + LR I DK
Sbjct: 398 VLLLAIAKKEGLDVNEQEVNAQLYQLCMRSGEDFKQVREAYEKS-GMIFTLRDRILADKA 456
Query: 422 IDHILKSVQIVDRKVTFDQ 440
+D I Q+ + + +
Sbjct: 457 MDAIYAKAQVKEVEPKAAE 475
>gi|289426464|ref|ZP_06428207.1| trigger factor [Propionibacterium acnes SK187]
gi|295131124|ref|YP_003581787.1| trigger factor [Propionibacterium acnes SK137]
gi|289153192|gb|EFD01910.1| trigger factor [Propionibacterium acnes SK187]
gi|291376222|gb|ADE00077.1| trigger factor [Propionibacterium acnes SK137]
gi|313773443|gb|EFS39409.1| trigger factor [Propionibacterium acnes HL074PA1]
gi|313793895|gb|EFS41919.1| trigger factor [Propionibacterium acnes HL110PA1]
gi|313801286|gb|EFS42537.1| trigger factor [Propionibacterium acnes HL110PA2]
gi|313811496|gb|EFS49210.1| trigger factor [Propionibacterium acnes HL083PA1]
gi|313816688|gb|EFS54402.1| trigger factor [Propionibacterium acnes HL059PA1]
gi|313829485|gb|EFS67199.1| trigger factor [Propionibacterium acnes HL063PA2]
gi|313831237|gb|EFS68951.1| trigger factor [Propionibacterium acnes HL007PA1]
gi|313834259|gb|EFS71973.1| trigger factor [Propionibacterium acnes HL056PA1]
gi|313839991|gb|EFS77705.1| trigger factor [Propionibacterium acnes HL086PA1]
gi|314914805|gb|EFS78636.1| trigger factor [Propionibacterium acnes HL005PA4]
gi|314930593|gb|EFS94424.1| trigger factor [Propionibacterium acnes HL067PA1]
gi|314954452|gb|EFS98858.1| trigger factor [Propionibacterium acnes HL027PA1]
gi|314957557|gb|EFT01660.1| trigger factor [Propionibacterium acnes HL002PA1]
gi|314961943|gb|EFT06044.1| trigger factor [Propionibacterium acnes HL002PA2]
gi|314963750|gb|EFT07850.1| trigger factor [Propionibacterium acnes HL082PA1]
gi|314968423|gb|EFT12521.1| trigger factor [Propionibacterium acnes HL037PA1]
gi|314974113|gb|EFT18209.1| trigger factor [Propionibacterium acnes HL053PA1]
gi|314976597|gb|EFT20692.1| trigger factor [Propionibacterium acnes HL045PA1]
gi|314984260|gb|EFT28352.1| trigger factor [Propionibacterium acnes HL005PA1]
gi|315079598|gb|EFT51591.1| trigger factor [Propionibacterium acnes HL053PA2]
gi|315081173|gb|EFT53149.1| trigger factor [Propionibacterium acnes HL078PA1]
gi|315087055|gb|EFT59031.1| trigger factor [Propionibacterium acnes HL002PA3]
gi|315095457|gb|EFT67433.1| trigger factor [Propionibacterium acnes HL038PA1]
gi|315099134|gb|EFT71110.1| trigger factor [Propionibacterium acnes HL059PA2]
gi|315100383|gb|EFT72359.1| trigger factor [Propionibacterium acnes HL046PA1]
gi|315109111|gb|EFT81087.1| trigger factor [Propionibacterium acnes HL030PA2]
gi|327328485|gb|EGE70247.1| trigger factor [Propionibacterium acnes HL096PA2]
gi|327444272|gb|EGE90926.1| trigger factor [Propionibacterium acnes HL043PA2]
gi|327444848|gb|EGE91502.1| trigger factor [Propionibacterium acnes HL043PA1]
gi|327452078|gb|EGE98732.1| trigger factor [Propionibacterium acnes HL092PA1]
gi|327457830|gb|EGF04485.1| trigger factor [Propionibacterium acnes HL083PA2]
gi|328758237|gb|EGF71853.1| trigger factor [Propionibacterium acnes HL025PA2]
gi|328759920|gb|EGF73504.1| trigger factor [Propionibacterium acnes HL099PA1]
Length = 530
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 83/482 (17%), Positives = 189/482 (39%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV ++++D ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAAKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LED + V + VGS + E + GLK G+ E L G+
Sbjct: 172 TRDGEALEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEF----HSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P SL+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPTSLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I K + ++ + + D K +L + + + +E+A +
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSAEKADGK 466
Query: 472 IS 473
+
Sbjct: 467 AT 468
>gi|134300402|ref|YP_001113898.1| trigger factor [Desulfotomaculum reducens MI-1]
gi|172044338|sp|A4J7M0|TIG_DESRM RecName: Full=Trigger factor; Short=TF
gi|134053102|gb|ABO51073.1| trigger factor [Desulfotomaculum reducens MI-1]
Length = 435
Score = 197 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 84/440 (19%), Positives = 190/440 (43%), Gaps = 17/440 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E L++ + R+ + N+ + + + N+ GFR GK P ++ G
Sbjct: 1 MKATAERIEKNTVLLEIEVEQERVDQALNQAYKKVVKQVNVPGFRKGKAPRKMVERFVGT 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++ II + E L + +P I I +G E L + + +
Sbjct: 61 ETLFGEAVEIIIPDAYMEALKETATEPIDQPKIDIVQG---------EAGKALIFKATVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++ + + L+VT+ EV ++++++++A + + +E E + D +D+T
Sbjct: 112 VKPEVTLGEYKGLEVTKASSEVTDEDVEKELARLQDRHAKLVTLEEGEIKKDDITLIDFT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS E L+G+K G++KE+ FPE++ ++LAGK
Sbjct: 172 GYVDGEAFEGGHAENYSLTVGSGTFIPGFEEQLLGVKLGEEKEVNVTFPEEYHAENLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I E+ ++++ A F++ ++ +K+ + +E + V+
Sbjct: 232 PATFKVKINEIKRKELASLDDEFAKDVSEFDTLDELKSDIRKKLMEVAERTAKSSVENGA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
++ K T ++P++++ + +L + ++ ++ Q
Sbjct: 292 VEAAVEKATVEIPQAMISQKVEEMLNSMGQRLAQQGINLDQYFQYTNTSMDDMRQRMRPD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ V +VL I + NI T EE + + + + +++ + L +
Sbjct: 352 AEKNVKNELVLDAIAKVENITATAEETNEEIQKIAE-YVKQDAEIVRKTLELQGELGHIN 410
Query: 414 APIFEDKVIDHILKSVQIVD 433
I KV+ ++++ ++V+
Sbjct: 411 QDIARRKVVQFLVENAKVVE 430
>gi|157804231|ref|YP_001492780.1| trigger factor [Rickettsia canadensis str. McKiel]
gi|166229928|sp|A8F062|TIG_RICCK RecName: Full=Trigger factor; Short=TF
gi|157785494|gb|ABV73995.1| trigger factor [Rickettsia canadensis str. McKiel]
Length = 442
Score = 197 bits (499), Expect = 5e-48, Method: Composition-based stats.
Identities = 114/439 (25%), Positives = 213/439 (48%), Gaps = 17/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +EGL + P + + D + + D+ K I GFR GKVP+S +K YG
Sbjct: 1 MGITVLKNEGLDFHAKISTPLSEIDDDMQKELLDLTKKVKIAGFRAGKVPVSIVKKKYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI ++ I+ I V ++ + + RP I + E D L+ + +I
Sbjct: 61 SIRNDIIERRINHWVNHVIKEHNLNIIGRPKIEELQNEPD---------KALEFTVKIEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYTV 179
LP+I I + + + EV K+++ Q+ ++A ++ + + D+VT+D
Sbjct: 112 LPKITIPDLKKISLDRPKLEVKPKDVEEQLEKLATLTKSYTKESKVTIKDGDQVTIDAIG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + + +++ ++GS L + L+G KTG + ++ FPE++ KDLAGK
Sbjct: 172 YIKDKTFDGGKLNDLKVVIGSNTLIPGFEKQLIGSKTGSEIDVNVTFPENYHAKDLAGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
R IK V + P +++++ A + + +R +++I+ SE + +K + D
Sbjct: 232 ARFVVQIKAVHTSEPTLIDDEFAKKFQSNNLEELRTHFAKQIENESEEAINTIMKMNLFD 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ FDVPESL+E E N + + + S D +E +YY+ LA RRV
Sbjct: 292 KLEKLLDFDVPESLLEQEKNILKSETDKDESLL------KDKSSKEITEYYNKLALRRVR 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + N+++ ++ + + QQ FPG E + D ++ P A+ L+ ED
Sbjct: 346 IGLLLAEYAKSKNLQLEPDDFKKVIIQQARNFPGQENMIFDFYKNNPKAIEALKGTALED 405
Query: 420 KVIDHILKS-VQIVDRKVT 437
KV+ +I + +++ ++K T
Sbjct: 406 KVVQYIFNNEIKLKEKKYT 424
>gi|314923828|gb|EFS87659.1| trigger factor [Propionibacterium acnes HL001PA1]
gi|314966158|gb|EFT10257.1| trigger factor [Propionibacterium acnes HL082PA2]
gi|315104387|gb|EFT76363.1| trigger factor [Propionibacterium acnes HL050PA2]
gi|327328172|gb|EGE69941.1| trigger factor [Propionibacterium acnes HL103PA1]
Length = 515
Score = 197 bits (499), Expect = 5e-48, Method: Composition-based stats.
Identities = 82/482 (17%), Positives = 188/482 (39%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV ++++D ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAVKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LED + V + VGS + E + GLK G+ E L G+
Sbjct: 172 TRDGEALEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEF----HSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P +L+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPTNLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I K + ++ + + D K +L + + + E+ S+
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSVEKVDSK 466
Query: 472 IS 473
+
Sbjct: 467 AT 468
>gi|38234364|ref|NP_940131.1| trigger factor [Corynebacterium diphtheriae NCTC 13129]
gi|67461787|sp|Q6NFU3|TIG_CORDI RecName: Full=Trigger factor; Short=TF
gi|38200627|emb|CAE50323.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Corynebacterium
diphtheriae]
Length = 448
Score = 197 bits (499), Expect = 5e-48, Method: Composition-based stats.
Identities = 70/452 (15%), Positives = 183/452 (40%), Gaps = 23/452 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L+V +P L ++ + + + I GFR GK P I + G+
Sbjct: 1 MKSSVEKLSETRVKLNVEVPFEELKPEIDQAYKALAQQITIPGFRRGKAPRQLIDARIGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + I++++ +++ + + +P I I + +E ++ D
Sbjct: 61 GAVLEQVINDMLPTRYQQVVEENELVVLGQPHIDITK---------LEDNEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + F V + +++ ID Q+ ++ + + + + + D +D
Sbjct: 112 VRPEITVPDFSAFAVEVPALKSNDEAIDAQIDKLRERFGELKDTKRKLKTDDFAIIDIEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D LE+ + + + + VG+ DL L GLK G+ E + GK+
Sbjct: 172 AIDGEKLEEATTEGMSYQVGAGDLIDGLDTALRGLKAGESAEFTTTLKAG----EHEGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++++ ++ + F++ +R ++++ + ++ ++ ++L
Sbjct: 228 AAVTVTVQQTKERKLPELDEEFVQTASEFDTVEELRESIAEQVAEQAKAEQATAIRDEVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLA 354
+ TF++PE +VE++ + L ++ ++ E+ +
Sbjct: 288 KAALAEATFELPEGVVEDQIHAQLHQLLNQVGGDEAALNAALEAQGTSREQFDADNRKNS 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V T + L + E+ EV+++E+ + + + + Q+ + L +
Sbjct: 348 EEAVRTQLFLDALAEQEQPEVSQQELTDHILFTAQSYGMDPNQFITQLQQS-GQIGNLFS 406
Query: 415 PIFEDKVIDHILKSVQIVD---RKVTFDQLFD 443
+ K + + V + D + V + F
Sbjct: 407 DVRRGKALAAAICRVSVKDDEGKAVDPSEYFG 438
>gi|289550568|ref|YP_003471472.1| Cell division trigger factor [Staphylococcus lugdunensis HKU09-01]
gi|289180100|gb|ADC87345.1| Cell division trigger factor [Staphylococcus lugdunensis HKU09-01]
Length = 435
Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats.
Identities = 85/448 (18%), Positives = 196/448 (43%), Gaps = 21/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLTVTVPAEKVNKALDKAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + + +P + + + IE D + +
Sbjct: 61 EALYQDAVDILLPEAYGEAIEETGIKPVDQPEVNVTQ---------IEKGKDFEFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++E+ + L++ + E+ ++E+ + + ++ E GD V +D++
Sbjct: 112 VEPEVELGDYKGLEIEKQETELTDEELQESIDHSLSHLADMVVKEDGVVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + +GS E L GLKTG++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEAFEGGQAEKYDLEIGSGSFIPGFEEQLEGLKTGEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ I E+ +++++A L E S + +++ + E K +
Sbjct: 232 EATFKTKINEIKFKEVPELDDEIANELDSEANSVDEYKENLRKRLAEQKETNAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ + D+P++++ E + ++Q+ + Q + + +
Sbjct: 292 AINKATENAKIDIPQAMINTELDRMVQEFAQRIQQQGLDLQTYFQISGQDESQMREQMKG 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I + NIEV+E+++ L + +F + + + +
Sbjct: 352 DAEQRVKTNLTLTAIADAENIEVSEKDIDKELEKMSSQFNLSVEDIKNTL----GNTDII 407
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
+ + KVID + + ++V+ K +
Sbjct: 408 KNDVRIQKVIDLLRDNAKLVEAKSEDKE 435
>gi|282854726|ref|ZP_06264061.1| trigger factor [Propionibacterium acnes J139]
gi|282582308|gb|EFB87690.1| trigger factor [Propionibacterium acnes J139]
gi|314982023|gb|EFT26116.1| trigger factor [Propionibacterium acnes HL110PA3]
gi|315090837|gb|EFT62813.1| trigger factor [Propionibacterium acnes HL110PA4]
Length = 515
Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats.
Identities = 82/480 (17%), Positives = 187/480 (38%), Gaps = 23/480 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV ++++D ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAVKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LED + V + VGS + E + GLK G+ E L G+
Sbjct: 172 TRDGEALEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEF----HSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P +L+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPTNLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I K + ++ + + D K +L + + + E+ S+
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSVEKVDSK 466
>gi|289422728|ref|ZP_06424568.1| trigger factor [Peptostreptococcus anaerobius 653-L]
gi|289156907|gb|EFD05532.1| trigger factor [Peptostreptococcus anaerobius 653-L]
Length = 427
Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats.
Identities = 89/438 (20%), Positives = 194/438 (44%), Gaps = 17/438 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ EG ++ + + + + + RS+ I GFR GK P I+ YGK
Sbjct: 1 MKAELIKKEGNSVSFEMAVDAKEFDAAVEKAYKKTRSRYKIDGFRKGKAPRRIIEMNYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I ++ +D ++ EI P + + + +P + I E D L L + D
Sbjct: 61 GIFFNDALDILLPEIYPVAVDELGLKVVSQPELDIKEANED---------GSLVLVATAD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ ++ +++ + EV+E+ ID ++ + +++ + E G+ +D+
Sbjct: 112 VRPEVEVKNYKGVEIEKVSAEVEEERIDAELNSMLQSHARVVTVDAPVENGNTAVIDFKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++ E + + +GS E ++G K G++ E+ FPE++ ++LAGK
Sbjct: 172 LLNGEAFEGGTAEAYSLEIGSGTFIPGFEEQIIGRKAGEEFEVNVTFPEEYPAEELAGKP 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V + EV +N++ A FES + ++ K+++ +E +++++ +
Sbjct: 232 VVFEVKLHEVKVKELPELNDEFAQDTTEFESLAELKADVKAKLEKDAEEEAKRQMRDAAV 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHMLA 354
++ ++P S+VE + + +L + ++S + EE + A
Sbjct: 292 AKVAEGVEVEIPNSMVEAQMDRMLNDLNMQLSYQGWSIEQFAELSGQSMEEIREARREDA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
V + +V+ I E N+EV++E++ L + + +K+ Q P + +
Sbjct: 352 LNIVKSTLVVEEIAELENVEVSQEDLDKDLEKFAAMYQIDIEKVKKSLQ--PEDIENISN 409
Query: 415 PIFEDKVIDHILKSVQIV 432
I +K +D IL + +
Sbjct: 410 RIRSEKTVDLILDAAVVK 427
>gi|210621779|ref|ZP_03292808.1| hypothetical protein CLOHIR_00753 [Clostridium hiranonis DSM 13275]
gi|210154543|gb|EEA85549.1| hypothetical protein CLOHIR_00753 [Clostridium hiranonis DSM 13275]
Length = 427
Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats.
Identities = 87/437 (19%), Positives = 195/437 (44%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ EG L + + ++ + + + R + +I GFR GK P I+ YG+
Sbjct: 1 MKAELLKKEGNVVTLKITVDYDKFNGAVEKAYKKTRGRYSIPGFRKGKAPRKIIEMNYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + ID + E+ + + PSI ++E + L + + +
Sbjct: 61 GIFYGDAIDALFPEVFVPAVEETGILPIGAPSIDVDEISKE---------NGLVMSVEVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++VT+D+ EV + I ++ + + N E E GD V +D+
Sbjct: 112 VRPEVKLGDYKGVEVTKDVPEVTDTMITEELDRMVEKNSRLVDVERNVEDGDIVNIDFKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD E + + + +GS E LVG ++ E+ FPE +S +DLA K
Sbjct: 172 FVDGEEFEGGNAEGYELTIGSHTFIDNFEEQLVGKALNEEVEVNVTFPEGYSREDLASKP 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDL-AVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ I + +N++ A FE+ ++ +++ + + +++ +++
Sbjct: 232 AKFEVKINAIKVREMPELNDEFAADTTEFETLDELKADIRANLEEQANNMAENQLREELV 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHMLA 354
+ I++ F P ++VE++ + ++Q + +++ S + + + I +D + A
Sbjct: 292 NKIADAADFITPNAMVEDQLDRMMQDLNYQLMSQGLQMEMLLEITGKDLNGLKEERREDA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V +VL I + NIE +EE++ + + + + ++M + P L ++
Sbjct: 352 EKLVRGTLVLDEIAKLENIEASEEDVDAEIAKMAEMYKMEAEEMKKALR--PEDLEDIAG 409
Query: 415 PIFEDKVIDHILKSVQI 431
+ K ID ++++ I
Sbjct: 410 QLKVRKTIDFLVENATI 426
>gi|306836724|ref|ZP_07469687.1| trigger factor [Corynebacterium accolens ATCC 49726]
gi|304567402|gb|EFM43004.1| trigger factor [Corynebacterium accolens ATCC 49726]
Length = 451
Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats.
Identities = 78/465 (16%), Positives = 187/465 (40%), Gaps = 23/465 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +L V +P L ++ I + +I GFR GK P I + +G+
Sbjct: 1 MKTTVDKLSDTRVKLTVNVPFAELDQEIDQAYAAIAQQVSIPGFRKGKAPRQLIDARFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL + +++++ + + D + +P + I IE ++ D
Sbjct: 61 GPILEQVVNDMLPSRYEQAVQSEDLKVIGQPDVDI---------SKIEDKDFVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ F ++ +T + E+++D+ + ++A+ + + + + GD +D T
Sbjct: 112 VRPEFEVPDFSEISITVPAIKAGEEDVDKALEDLAERFGELKDTKRKMKTGDYAIIDITA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +E+ S + + + +G +L L G+KTG+ E + A
Sbjct: 172 EVDGDKIEEASTEGLSYSIGDDNLIKGLDTALRGMKTGEDNEFTSTIQSGEHKDEEA--- 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ ++++ A + +++ +R ++++ + +++ ++L
Sbjct: 229 -TFKVHVQQTKERKLPDMDDEFAQMASEYDTIEELREATKTEVEESKKAEQAGQIRDEVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLA 354
F++P+S+V+ + + L ++ +++ + + EE Q A
Sbjct: 288 KAALADVDFELPQSVVDEQAHAQLHQILGQLAHDEKALAQLLEAQGTSREEFDQQTREQA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V T I L + EK EV+++E+ + + + + Q +A L +
Sbjct: 348 EESVRTQIFLDAVAEKEEPEVSQQELSDHILFTAQSYGMDPNQFIQQLQSN-GQIANLFS 406
Query: 415 PIFEDKVIDHILKSVQIVDRK---VTFDQLFDNSSESSPEKLLDK 456
+ K + + + D + V +Q F E E +
Sbjct: 407 DVRRGKALAAAICRTTVKDEEGNDVDVEQYFGEVEEDENEATDAE 451
>gi|212638445|ref|YP_002314965.1| trigger factor [Anoxybacillus flavithermus WK1]
gi|226703991|sp|B7GH24|TIG_ANOFW RecName: Full=Trigger factor; Short=TF
gi|212559925|gb|ACJ32980.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Anoxybacillus flavithermus WK1]
Length = 428
Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats.
Identities = 85/440 (19%), Positives = 192/440 (43%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V + + ++ + +E + + K I GFR GK+P S + +G
Sbjct: 1 MSAKWEKLEGNQGVLTVEVDAEKVNEGLDEAFKKVVKKVQIPGFRKGKIPRSLFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ ++ +D ++ E + + + RP I + + E L
Sbjct: 61 ESLYADALDILLPEAYAKAVEETGIEPVDRPEIDVEQM---------EKGKSLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++ + + L+V + V ++++++++ + + + VKE + D V +D+
Sbjct: 112 VKPEVTLGEYKGLEVEKLDDTVTDEDVEQELKRLQERHAELVVKEEGTVENGDTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N ++GS E L+G+ G++K+IE FPE++ + LAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLVIGSGTFIPGFEEQLIGMAAGEEKDIEVTFPEEYHAEQLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ E+ + ++++ A E+ A++ +++ + + ++
Sbjct: 232 PAVFKIKLHEIKTKQLPALDDEFAKDVDEEVETLDALKEKIKERLTKEKKEEAEAALRDA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++ + D+PE +V+NE + ++++ + Q + +
Sbjct: 292 VVQKATENAQMDIPEVMVKNETDRMIREFEQRLQMQGLNLDLYYQFSGQDEAALREQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I + NI+VTEEE++ L + + K+ + L L
Sbjct: 352 EAEKRVRVTLTLEAIVKAENIDVTEEEVEKELQEMASLYNLSVDKLKELL----GTLDGL 407
Query: 413 RAPIFEDKVIDHILKSVQIV 432
+ + K ID ++++ ++V
Sbjct: 408 KEDLKMRKAIDFLVENSKVV 427
>gi|255325473|ref|ZP_05366575.1| trigger factor [Corynebacterium tuberculostearicum SK141]
gi|311741265|ref|ZP_07715089.1| trigger factor [Corynebacterium pseudogenitalium ATCC 33035]
gi|255297411|gb|EET76726.1| trigger factor [Corynebacterium tuberculostearicum SK141]
gi|311303435|gb|EFQ79514.1| trigger factor [Corynebacterium pseudogenitalium ATCC 33035]
Length = 452
Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats.
Identities = 82/440 (18%), Positives = 184/440 (41%), Gaps = 18/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +L V +P L ++ I + +I GFR GK P I + +G+
Sbjct: 1 MKTTVDKLSDTRVKLTVNVPFAELDQEIDQAYAAIAQQVSIPGFRKGKAPRQLIDARFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL + +++++ + + + D + +P + I IE ++ D
Sbjct: 61 GPILEQVVNDMLPSRYEQAVKENDLKVIGQPDVDI---------SKIEDKDFVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+ EI F + VT + DE+++D+ + E+A+ + + + + GD +D T
Sbjct: 112 IRPEFEIPDFSKISVTVPALKADEEDVDKALEELAERFGELKDTKRKMKTGDYAIIDITA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D +ED S + + + +G DL L G+KTG+ E + A K
Sbjct: 172 EIDGEKIEDASTEGLSYRIGDDDLIKGLDTALRGMKTGEDNEFTSTIQSGEHKDEEATIK 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
V + S + LP + + + F++ +R ++++ + +++ ++L
Sbjct: 232 VHVQQSKER---KLPAMDDEFAQMASEFDTMDELRESTKTQVEETKKAEQAAQIRDEVLK 288
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAK 355
++ F++P+S+V+ + + L ++ +++ + + EE + A+
Sbjct: 289 SALSEVEFELPQSVVDEQAHSQLHQILGQLAHDEKALAQLLEAQGTSREEFDKQTREQAE 348
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
V T + L + EK EV+++E+ + + + + Q +A L +
Sbjct: 349 ESVRTQLFLDAVAEKEEPEVSQQELTDHILFTAQSYGMDPNQFIQQLQSN-GQIANLFSD 407
Query: 416 IFEDKVIDHILKSVQIVDRK 435
+ K + + + D +
Sbjct: 408 VRRGKALAAAICRTTVKDEE 427
>gi|225378751|ref|ZP_03755972.1| hypothetical protein ROSEINA2194_04421 [Roseburia inulinivorans DSM
16841]
gi|225209410|gb|EEG91764.1| hypothetical protein ROSEINA2194_04421 [Roseburia inulinivorans DSM
16841]
Length = 447
Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats.
Identities = 85/437 (19%), Positives = 190/437 (43%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L V +P+ + + ++K +I GFR GKVP + I+ +YG
Sbjct: 1 MSVQVEKLEKNMAKLTVEVPAEEVEKALQAAYMKEKNKISIPGFRKGKVPRAMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E + +I++ + + E RP+I I + IE
Sbjct: 61 AVFYEEAANILIQDNYAAAMEESKEDIVSRPTIDIVQ---------IESGKPFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++ + + +QVT+ V ++E++ + + + N + GD +D+
Sbjct: 112 VRPEVTLGKYKGVQVTKIDTTVTDEEVEAALEKEQQKNSRTVTVTDRPVANGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + E +N +GS + LVG GD+ E+ FPE + DLAGK
Sbjct: 172 GFVDGIAFEGGKGENHPLEIGSHSFIDTFEDQLVGHNAGDEVEVNVTFPEKYQAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I E+ + +N++ A F++ + + + ++ E ++ + +
Sbjct: 232 PAVFKVKINEIKAKELPELNDEFASEVSEFDTLAEYKEDLRKHLEVEKENEAKRTKEDEA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ I +K T ++PE+++E + ++ + ++ + + + +
Sbjct: 292 IKKIIDKSTMEIPEAMIETQCENMINEFAQRIAQSGLSMEQYMQFSGMTIDGLKEQVRPE 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ R+ + +VL I ++ NIEV+E+E+ + + + ++ K+ ++ + ++
Sbjct: 352 AETRIKSSLVLEQIAKEENIEVSEDEINAEVEKMAAQYGMEADKLKEYLGEAE--KESIK 409
Query: 414 APIFEDKVIDHILKSVQ 430
+ K +D I+++V+
Sbjct: 410 RDLSVTKAVDLIMENVK 426
>gi|251798426|ref|YP_003013157.1| trigger factor [Paenibacillus sp. JDR-2]
gi|247546052|gb|ACT03071.1| trigger factor [Paenibacillus sp. JDR-2]
Length = 434
Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats.
Identities = 78/442 (17%), Positives = 186/442 (42%), Gaps = 17/442 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + + +DV + + ++ + ++ + + K N+ GFR GKVP +S +G
Sbjct: 1 MKATWEKIDKNLVSIDVEVDAEKVAAALDQAFKKVVQKVNVPGFRKGKVPRGMFESRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ID ++ + E + ++R RP I + + K +
Sbjct: 61 ESLYQDAIDILLPQAYEEAVKVTEQRPVDRPEIDVEQ---------FAKGQSFKFKAKVI 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++ + + L+V V E+E++ ++ + + + ++E ++ GD +D+
Sbjct: 112 VRPEVTLGEYKGLEVPSFEATVSEEEVNAELERLQQRHAELTVLEEGAAQNGDITVIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + ++ +GS + +VG++TGD K++E FPE + ++LAGK
Sbjct: 172 GYVDGEAFDGGKAESYSLELGSNSFIPGFEDQVVGMQTGDFKDVEVTFPESYHAENLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG-----FESESAMRGLCSQKIKQHSEFLVRQKV 293
+ E+ ++++ A + E + + + + +E ++ V
Sbjct: 232 PAVFKVKLHEIKRKNLPALDDEFAKDISEFDTLEEYKQDLVSKLKENKEGEAERNLQNAV 291
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
+ + + + + V+ ++R + + + Q ++
Sbjct: 292 IEKAAEAAEVEVPEPMINTEVDFMLRDFENRLRMQGMNIDLYYQFSGQSEQVLRDQMKED 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV +VL I + NI+V+EE++ L + ++ D F+K L+
Sbjct: 352 AQKRVRNNLVLNAIAKSENIQVSEEDVNEELESLSKAYNRPAAELRDVFEKN-GQFDSLK 410
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I K I+ ++++ + +
Sbjct: 411 EDIELRKTIEFLVENSKTAEVA 432
>gi|91762001|ref|ZP_01263966.1| trigger factor [Candidatus Pelagibacter ubique HTCC1002]
gi|91717803|gb|EAS84453.1| trigger factor [Candidatus Pelagibacter ubique HTCC1002]
Length = 477
Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats.
Identities = 123/477 (25%), Positives = 237/477 (49%), Gaps = 26/477 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + +GL +++ V I + +E+ E+I+ N+KGFRPGKVP +K +G+
Sbjct: 1 MKVTVENKKGLNKDIKVFIDKETMNSYMDEKYEEIKKTVNLKGFRPGKVPKEVLKRQFGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I SE +D+++K+ + L + A +P + + D DL+ +S
Sbjct: 61 AIFSEVLDKVLKDTSVKALEDNKIKPAGQPKLDLKTYGED---------KDLEYVMSITE 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP++E+ S ++++ + ++D E D+++ EIAK+ F+ + ++ + V DY
Sbjct: 112 LPKVELKSVENIKFDEYSVKIDTNETDKRIKEIAKSQNNFKEVAADVKAVEENLVIFDYK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D KN Q I+G + L+G+K D+K ++ PE++ K+ A K
Sbjct: 172 ATIDGKDFTGGEGKNTQLILGKDLFIKGFDKQLIGVKKNDEKSVDVTLPENYPQKEYANK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
K I EV V +++ A LG + + ++ L S++I + + + K QIL
Sbjct: 232 KANFICKITEVKKSEEVKIDDVFAKNLGAKDLADLKVLVSKQINDEYKNSLDKLAKTQIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
I N ++PE+++E E + Q + E S + + +AK+R+
Sbjct: 292 KEIENFKVDEIPENIIEEEVKILSQGMTEEDSKK-------------SRKNFEEIAKKRI 338
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
G++L GE+N I+VTE+E+Q+ + +QL PG EK +++ +QK P+ALA LR ++E
Sbjct: 339 KVGLILNEFGEQNKIKVTEQEVQAEVQKQLRMMPGQEKMVMEFYQKNPSALASLRGTVYE 398
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFD--NSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
+K+ID I + ++++ ++ + + + E+ S+ +
Sbjct: 399 EKIIDLIKTKAKPSKKEISKEEAEKILKAHQKQDHNHEHDHNHDHDHPEEKKASKST 455
>gi|297562337|ref|YP_003681311.1| trigger factor [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296846785|gb|ADH68805.1| trigger factor [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 481
Score = 196 bits (498), Expect = 6e-48, Method: Composition-based stats.
Identities = 79/440 (17%), Positives = 181/440 (41%), Gaps = 20/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L + +P L +F+ + + + IKGFRPGK P I G+
Sbjct: 1 MKTDVEELSPTRVKLTIEVPFEELDHAFDVTYKSLAKQVRIKGFRPGKAPARLIDRYVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++SE ++ + E+ E + K + A +P + + + +E +L D
Sbjct: 61 GAVISEAVNHAVPELYNEAIQKEELFALGQPDVEVTK---------LEDNDELAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ + ++VT D EV ++++D Q+ + + + E GD +++D +
Sbjct: 112 VRPKFEVEDYKGIEVTVDSAEVTDEQVDEQIGTLRERFSTLVGVDRPVEDGDHLSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD LED + + VG+ + E L G++ G E F + G++
Sbjct: 172 AVDGEKLEDVAVSGYSYEVGTNTMLEGLDETLRGMEAG----GEATFSTTLVGGEHEGRE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ V ++++ A F++ +R ++ + + + L
Sbjct: 228 ADVTVTVHSVKVKELPELDDEFAQLASEFDTIEELRADVRNRMGEVRRLQQLSAARDKAL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----A 354
+ + + +PES+VE E Q + +++ + + E+ + + A
Sbjct: 288 EQLIDSVDIPLPESVVEEEITRRRQSLEQQLAQSGLTKEAYLESQEKTEEEFDEELTTGA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V G +L + + ++ + E+ +++Q R ++ H +
Sbjct: 348 RSAVKAGFILDQLAIQEDLSADQGELSQYVFEQAQRMGVSPDQLAQHLVESNQIRVAFT- 406
Query: 415 PIFEDKVIDHILKSVQIVDR 434
+ K +D +L +I D
Sbjct: 407 EVVRGKAMDLVLAGARITDE 426
>gi|332981495|ref|YP_004462936.1| trigger factor [Mahella australiensis 50-1 BON]
gi|332699173|gb|AEE96114.1| trigger factor [Mahella australiensis 50-1 BON]
Length = 440
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 90/442 (20%), Positives = 201/442 (45%), Gaps = 21/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +L + + + ++ + K + GFR GKVP ++ YG+
Sbjct: 1 MGSQLEQLENNVAKLRIEVDAAAFEEAIKKAYRKNVKKFRVPGFRVGKVPQHIVEQYYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
S+ + ID++ + + + + D P I I + I DL L
Sbjct: 61 SVFYEDAIDDVFPDAYSKAIEENDLTPVDLPQIDIVQ---------IGKGKDLILSADVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++ + + +QV + + V ++++++++ ++ + N ++ S+ GD VTVDYT
Sbjct: 112 VKPEVTLGEYKGIQVKRPVYNVTDEDVEKELEDLRQKNARLIAVEDRASQEGDTVTVDYT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E ++ +G E LVG++ G+ KE FPED+ DLAGK
Sbjct: 172 GYLDGQEFEGGKAEDQVIELGQGRFIPGFEEQLVGMRVGENKEFNIVFPEDYGNNDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+V + ++KE+ ++++ A F++ +R ++++ + + ++ +
Sbjct: 232 EVTFSVTMKEIKYKELPELDDEFAKDVSEFDTLEELRQSIRERLENEAAQQTQSALENAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+ ++ + D+P+ +VE E + +LQ++ + + Q ++ E + Y +
Sbjct: 292 IAKVTENSSVDIPDVMVERELDDVLQELDYNLQYNGLSLDIYLQITNTSKEALREQYKDV 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R+ + +VL IG+ NIEV+ EE+ + ++ + ++ P+ +
Sbjct: 352 AHNRLKSRMVLEKIGQVENIEVSPEEVDEEIKKRAEQMNVDVEQYKQRI--NPSF---IE 406
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
+ DK+I ++++ + D +
Sbjct: 407 ETLRMDKIISFLIENAVVEDVE 428
>gi|313906305|ref|ZP_07839648.1| trigger factor [Eubacterium cellulosolvens 6]
gi|313468861|gb|EFR64220.1| trigger factor [Eubacterium cellulosolvens 6]
Length = 440
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 68/437 (15%), Positives = 173/437 (39%), Gaps = 19/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + + + + + +I GFR GKVP + ++ +YG
Sbjct: 1 MSVKVENLENSMAKLTIEVSAEEFEKELQNAYQKQKKNISIPGFRKGKVPRAMVEKMYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + + +I + + + RP+I + + IE
Sbjct: 61 AVFYDDAANALIPKAYVDAEKESGLDIVSRPAIDVVQ---------IEKGKAFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA--FEVKETESEIGDKVTVDY 177
P++ + + ++V + V ++++ +++ + + N E ++ GD +T+D+
Sbjct: 112 TKPEVTLGDYKGVEVPKTDTTVTDEDVQKRLEQEQRKNSREITREAEDAAQDGDTLTLDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D V + + N +GS LVG+KTG+ K+I FPED+ ++L G
Sbjct: 172 EGKIDGVAFDGGTASNQTLKLGSNSFIPGFEAQLVGVKTGETKDITVTFPEDYHAEELKG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ ++ ++ + ++++ A F++ + +++++ + +Q +
Sbjct: 232 KEAVFTCTVHKITATELPELDDEFAGDVSEFDTLDEFKADLKKQLQEEKDRAAKQAKRDN 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
L + T ++P+++++ + +++ + S
Sbjct: 292 GLTKAAANATIEIPQAMMDTRCDDMVENFARRLQSQGMSLDQYMQYTGSDMNAMRAQVKP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ ++ +VL I E NI VT+++++ + + + + +
Sbjct: 352 QAEIQIRNELVLEKIAEVENITVTDDDVKGEMETMAKAYNMKLEDIEKMIGD--EQKEII 409
Query: 413 RAPIFEDKVIDHILKSV 429
+ + K D I +
Sbjct: 410 KKDLALQKAADLIADNA 426
>gi|325963650|ref|YP_004241556.1| trigger factor [Arthrobacter phenanthrenivorans Sphe3]
gi|323469737|gb|ADX73422.1| trigger factor [Arthrobacter phenanthrenivorans Sphe3]
Length = 465
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 76/443 (17%), Positives = 166/443 (37%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L+V +P L S + + + S+ + GFR GKVP I G+
Sbjct: 1 MKSAVENLTPTRVKLNVEVPFEELKPSIDSAYKTVASQIQVPGFRKGKVPAKLIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L I+E + + + R RP + I E LK D
Sbjct: 61 GYVLETAINEGLNGWYQAAVQESGIRPLSRPEVEITE-----VPDPSATDGGLKFAAEVD 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ + ++V + ++++D+ + E+ + + + GD +T+D T
Sbjct: 116 VRPEIELPDYSGIKVEVAAAQSSDEDVDKALDELRGRFGTLKSVDRPAADGDFLTIDITA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D ++ S + + VG+ + E + GL + + D AG+
Sbjct: 176 TIDGEEVD--SAAGLSYQVGAGTMLEGMDEAVTGLSADEDAIFDTTLV----GGDHAGEA 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +K V N+D A F++ + +R +++ + + ++L
Sbjct: 230 AQVKVVVKAVKERELPEANDDFAQLASEFDTLAELREDLAKQAADSKIVEQGVEARDKVL 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + VP+S+VE + + + EE + R
Sbjct: 290 DKLVELVEVPVPDSVVEEQLEAHFK--------EGNGHGEGEHDTEEHREEVRANTARAF 341
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L I EK + V++ E+ + ++ + + + + + +
Sbjct: 342 QNEIILDAIAEKEEVNVSQNELIDYIVTTASQYGMDPNQFAQIIDQS-GQVPMMVSEVRR 400
Query: 419 DKVIDHILKSVQIVDRKVTFDQL 441
K + +L ++ D + L
Sbjct: 401 RKALAVVLGQAEVTDTEGNAVDL 423
>gi|70699879|gb|AAZ06848.1| trigger factor [Microbacterium arborescens]
Length = 509
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 86/442 (19%), Positives = 181/442 (40%), Gaps = 27/442 (6%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SI 62
+ + +L + + + L S E I I GFR GKVP I G+ ++
Sbjct: 5 TVETLSPTRVKLHITVSPDELKPSITHAYEHIAQDVQIPGFRKGKVPAPIIDQRVGRGAV 64
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
+ + E + E ++ + R RPS + + SD + + DLK+ + D+ P
Sbjct: 65 IEHAVSEGLDGFYREAVTANELRVLGRPSAEVVDWPSDK-----DFSGDLKVEVEVDVRP 119
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVD 182
+ E+ +++D+ + + D+ ID ++ + + + GD V +D ++D
Sbjct: 120 EFELPAYEDITIEVEPVATDDAAIDEELDRLRGRFGTLVTVDRPATKGDFVELDLVATID 179
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
++ + V + VGS +L E + L G+ + F D AG++ +
Sbjct: 180 GNEID--RAEGVSYEVGSGELLEGIDEAIDSLTAGE----DTTFRSKLVGGDHAGEEAEV 233
Query: 243 NFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++K V ++D A + F++ + +R ++++ Q S F + +++D +
Sbjct: 234 AVTVKAVKERELPEADDDFAQMASEFDTIAELRESLAERVSQQSVFTQGAAAREKLVDAL 293
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
K VP LVE+E + L+ D+ ++++ T
Sbjct: 294 LEKVEIPVPAGLVEDEVHAHLEG-------------EGRLEDDAHRAEVTEASEKQFRTQ 340
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+VL I E + ++V+++E+ L Q ++ + ++ Q+ L + + +K
Sbjct: 341 MVLDKIAETHEVQVSQDELTQYLIQASAQYGMAPQDFVNALQQN-GQLPVMVGEVARNKA 399
Query: 422 IDHILKSVQIVDRKVTFDQLFD 443
+ L V +VD L
Sbjct: 400 LAIALGKVTVVDTDGKAVDLTG 421
>gi|313813444|gb|EFS51158.1| trigger factor [Propionibacterium acnes HL025PA1]
Length = 530
Score = 196 bits (497), Expect = 7e-48, Method: Composition-based stats.
Identities = 82/482 (17%), Positives = 188/482 (39%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV ++++D ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAAKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LED + V + VGS + E + GLK G+ E L G+
Sbjct: 172 TRDGEALEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEF----HSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P SL+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPTSLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I K + ++ + + D K +L + + + +E+ +
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSAEKVDGK 466
Query: 472 IS 473
+
Sbjct: 467 AT 468
>gi|220903964|ref|YP_002479276.1| trigger factor [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
gi|254788998|sp|B8IYM1|TIG_DESDA RecName: Full=Trigger factor; Short=TF
gi|219868263|gb|ACL48598.1| trigger factor [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
Length = 452
Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats.
Identities = 87/461 (18%), Positives = 189/461 (40%), Gaps = 11/461 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +++++ + + S I ++ + GFR GKVP S I+ +
Sbjct: 1 MEYSAEDISPVRKKVVITTEPQEVEASIMGTIALYKTSVQVDGFRKGKVPASVIEQRFRD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E ++I + +++ K D + T E + +++
Sbjct: 61 KIYEEARQDLINVHINDVMQKLDVMPLAGLDVD--------TPDAFERGKGFAYTIEFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE--IGDKVTVDYT 178
LP ++ ++ + V Q+ VDEKE+ + I ++ E + G TVD+
Sbjct: 113 LPTFDLPPYEGMDVEQEKVVVDEKEVQEVLDRILRDRAQLVPVEGKGPAVDGQIATVDFA 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ +E ++ +G + ++ + G++ E E FPED KDLAGK
Sbjct: 173 AFENGEPVEGVKAESFDLALGERQALEDFEALVKTIPYGEEGEGEIHFPEDFIAKDLAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V + + + ++++LA LG ES ++ ++ + L R ++ +L
Sbjct: 233 TVTMKVKVHAIKERKLPALDDELAKSLGLESVEKLKEAITKSYTESRTGLNRSAAQKSLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + F++P SLVE + N +L + + + +++ E+ + A
Sbjct: 293 DGLLKMVAFELPPSLVETQMNTLLADMAGRLERQGRSLESLGKSMEDLRKDMQPQADELA 352
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++L ++ +K ++VT+ E+ + +YQ R K + + +++ + LR +
Sbjct: 353 RAQVLLLSVAKKEGLDVTDHEVTTQIYQLAMRTGEDFKALREQYERS-GMIFVLRDRMLA 411
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSK 459
DK +D I + + + + + + + SK
Sbjct: 412 DKAMDLIYAKANVKEVEPKAPETGAEADAAPGASASAQESK 452
>gi|226227815|ref|YP_002761921.1| trigger factor [Gemmatimonas aurantiaca T-27]
gi|226091006|dbj|BAH39451.1| trigger factor [Gemmatimonas aurantiaca T-27]
Length = 414
Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats.
Identities = 80/435 (18%), Positives = 177/435 (40%), Gaps = 26/435 (5%)
Query: 1 MQVIEKFSE--GLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLY 58
M + +E G+ R L + +P++ + ++ ++ + GFRPGK P S ++ +
Sbjct: 1 MNISITPTETAGVSRRLQITVPADTVASYEDQAARKYATQVRLPGFRPGKAPPSMVRKRF 60
Query: 59 GKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+++ E I+ +I + E + + + A +P I E L+ L
Sbjct: 61 PEAVRQEAIELVINDAFREAIDREGFKLAAQPHI---------HDLKSEPGQPLEFELHC 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
++ P++ + D +T+ V E+ ID Q+ + + + E + GD VTV +
Sbjct: 112 EVRPELALEKVDGFTITRRDTTVTEELIDEQIERLREQKADWSPVEEKPAPGDMVTVILS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ IL K + ++G E+++ G E +PED + G
Sbjct: 172 TEETDGILP--EGKEYRIVLGGGQAIPGIEELIMETAPGASSEKSVRWPEDFPDESQRGA 229
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +K+V +++ A + F++ +R + +HS+ V+ Q+
Sbjct: 230 TKLVRVQLKDVKRKALPALDDAFAREIGDFDTVQVLRDAVRTDMGEHSKREADADVRGQL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
++ I FDVP++ V +G +Q + Q + +A+R+
Sbjct: 290 IEQIVTANPFDVPKAWVMQLVDGYMQMYGVPENQKQ-----------TFTQEFMPMAERQ 338
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V +++ T+ E+ ++ + ++ + + + ++ QK L E+ +
Sbjct: 339 VRRDLIVDTLAERESLTASAADVDARVEELAKARNADPGQVYAQLQK-AGRLTEVERELT 397
Query: 418 EDKVIDHILKSVQIV 432
ED+V +L+ +
Sbjct: 398 EDRVFGWLLEKNPVT 412
>gi|328952151|ref|YP_004369485.1| Trigger factor [Desulfobacca acetoxidans DSM 11109]
gi|328452475|gb|AEB08304.1| Trigger factor [Desulfobacca acetoxidans DSM 11109]
Length = 443
Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats.
Identities = 93/461 (20%), Positives = 190/461 (41%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + ++R+L V++PS ++ + KA IKGFRPGK P S ++ YGK
Sbjct: 5 MKVELEEISPVQRKLSVLVPSQKVDKQMDLAYRKWGGKAKIKGFRPGKAPRSILQRYYGK 64
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E E+ + + E L + + + I D + ++
Sbjct: 65 EIEQEVSQELFHQSLNEALQEANLKPVA--------LRPPDQLPPIVHGDDYMYSIELEV 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTVDYT 178
P+ ++ +L +T V E+ +++++ EI + E + + D V +DY
Sbjct: 117 APEFTPENYLNLNLTAPEVAVTEEMVEQRLHEIQQQQATLEPIAADRPIQDKDIVVIDYK 176
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ +E + N +G+ L +E L+GLK G++ P D LAG+
Sbjct: 177 AFAEGKPIEGGNSDNAYLEIGAGKLPAEFELHLIGLKKGEETAFPLEVPADFINPVLAGR 236
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I ++ +++ LA F + + +R + +++ E ++++RQ
Sbjct: 237 TADFKIRIIDIKELKIPELDDALAQSLSERFSTLADLRQVVEADLQRRGEQQRYEELRRQ 296
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
L+ I D P SLV E +++ + +D E+ L+ A++
Sbjct: 297 ALEQILESNPVDAPPSLVRQEQERTVRQQLNVLHRQGLNVAALD--PEKLLERAQEAAEK 354
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ ++L I + + VTEE++++ + + + + +Q+ + +LR I
Sbjct: 355 QTKINLILEKIAAREGLIVTEEDLETGYQRIAEQAGDTPQMVKKIYQE-KELVDDLRGQI 413
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+K I+ ++ I N +E++ E +S
Sbjct: 414 RGEKTIEFLIDKASIT-----------NPTEAATETAEKES 443
>gi|50843049|ref|YP_056276.1| trigger factor [Propionibacterium acnes KPA171202]
gi|81611396|sp|Q6A7E7|TIG_PROAC RecName: Full=Trigger factor; Short=TF
gi|50840651|gb|AAT83318.1| trigger factor (chaperone in protein export) [Propionibacterium
acnes KPA171202]
gi|315106879|gb|EFT78855.1| trigger factor [Propionibacterium acnes HL030PA1]
Length = 530
Score = 196 bits (497), Expect = 8e-48, Method: Composition-based stats.
Identities = 82/482 (17%), Positives = 190/482 (39%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV ++++D ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAAKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D +LED + V + VGS + E + GLK G+ E L G+
Sbjct: 172 TRDGEVLEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEF----HSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P +L+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPTNLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I K + ++ + + D K +L + + + +E+A +
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSAEKADGK 466
Query: 472 IS 473
+
Sbjct: 467 AT 468
>gi|300859023|ref|YP_003784006.1| trigger factor [Corynebacterium pseudotuberculosis FRC41]
gi|300686477|gb|ADK29399.1| trigger factor [Corynebacterium pseudotuberculosis FRC41]
gi|302206722|gb|ADL11064.1| Trigger factor [Corynebacterium pseudotuberculosis C231]
gi|302331276|gb|ADL21470.1| Trigger factor [Corynebacterium pseudotuberculosis 1002]
gi|308276965|gb|ADO26864.1| Trigger factor [Corynebacterium pseudotuberculosis I19]
Length = 450
Score = 195 bits (496), Expect = 8e-48, Method: Composition-based stats.
Identities = 76/440 (17%), Positives = 181/440 (41%), Gaps = 20/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L+V +P L ++ + + + NI GFR GK P I + G+
Sbjct: 1 MKSSVEKLSDTRVKLNVEVPFEELKSEIDQAYKALAQQINIPGFRRGKAPRQLIDARIGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + +++++ + + + +P+I I + IE ++ D
Sbjct: 61 GPVLEQVVNDMLPARYQQACEENELVVLGQPAIDITK---------IEDNDVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+I + F + V +VDE+ +D ++ + + + + + + D T+D
Sbjct: 112 IRPEITVPDFAEFNVEVPALKVDEEAVDAEIDRLRERFGELKDTKRKLKTNDFATIDLAA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
SVD +E+ + + + VG+ DL L GLKTG+ E + AGK+
Sbjct: 172 SVDGEAIEEAVTEGMSYQVGAGDLIDGLDTALRGLKTGESAEFTTTLQAG----EYAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDL-AVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++++ V+ + + F++ +R + ++++ ++ ++ ++L
Sbjct: 228 ATVTVTVQQTKERKLPEVDEEFVQMASEFDTVEELRESVTAQVEEKAKAAQATAIRDEVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLA 354
+ TF++PE +V + L ++ +++ E+ +
Sbjct: 288 KVALAESTFELPEGVVNEQVEAQLHQLLGQLAHDEAALNAALEAQGTTREDFDAENRKNS 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V T + L + E+ EV+++E+ + + + + Q+ +A L +
Sbjct: 348 EEAVRTQLFLDALAEQETPEVSQQELTDHILFTAQSYGMDPNQFVAQLQQT-GQIANLFS 406
Query: 415 PIFEDKVIDHILKSVQIVDR 434
+ K + + V + D
Sbjct: 407 DVRRGKALAAAICRVSVKDE 426
>gi|227503043|ref|ZP_03933092.1| trigger factor [Corynebacterium accolens ATCC 49725]
gi|227076104|gb|EEI14067.1| trigger factor [Corynebacterium accolens ATCC 49725]
Length = 451
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 79/465 (16%), Positives = 188/465 (40%), Gaps = 23/465 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +L V +P L ++ I + +I GFR GK P I + +G+
Sbjct: 1 MKTTVDKLSDTRVKLTVNVPFAELDQEIDQAYAAIAQQVSIPGFRKGKAPRQLIDARFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL + +++++ + + D + +P + I IE ++ D
Sbjct: 61 GPILEQVVNDMLPSRYEQAVQSEDLKVIGQPDVDI---------SKIEDKDFVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ +F ++ VT + E+++D+ + ++A+ + + + + GD +D T
Sbjct: 112 VRPEFEVPNFSEISVTVPAIKAGEEDVDKALEDLAERFGELKDTKRKMKTGDYAIIDITA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +E+ S + + + +G +L L G+KTG+ E + A
Sbjct: 172 EVDGEKIEEASTEGLSYSIGDDNLIKGLDTALRGMKTGEDNEFTSTIQSGEHKDEEA--- 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++ ++++ A + +++ +R ++++ + +++ ++L
Sbjct: 229 -TFKVHVQQTKERKLPDMDDEFAQMASEYDTIEELREATKTEVEESKKAEQAGQIRDEVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLA 354
F++P+S+V+ + + L ++ +++ + + EE Q A
Sbjct: 288 KAALAGVEFELPQSVVDEQAHAQLHQILGQLAHDEKALAQLLEAQGTSREEFDQQTREQA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V T I L + EK EV+++E+ + + + + Q +A L +
Sbjct: 348 EESVRTQIFLDAVAEKEEPEVSQQELSDHILFTAQSYGMDPNQFIQQLQSN-GQIANLFS 406
Query: 415 PIFEDKVIDHILKSVQIVDRK---VTFDQLFDNSSESSPEKLLDK 456
+ K + + + D + V +Q F E E +
Sbjct: 407 DVRRGKALAAAICRTTVKDEEGNDVDVEQYFGEVEEDENEATDAE 451
>gi|182414554|ref|YP_001819620.1| trigger factor [Opitutus terrae PB90-1]
gi|238692914|sp|B1ZW06|TIG_OPITP RecName: Full=Trigger factor; Short=TF
gi|177841768|gb|ACB76020.1| trigger factor [Opitutus terrae PB90-1]
Length = 440
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 92/446 (20%), Positives = 181/446 (40%), Gaps = 20/446 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V ++ L V + ++ + + E + + +A I GFRPGK P + I + K
Sbjct: 1 MNVQLNSLSDTRKSLVVSLEASEVDAAHQEVVAEFARQARIPGFRPGKAPAAIIAKRFAK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E ++ + + L K+ ++ G + + ++ D+
Sbjct: 61 DITDEFKQRVVTKAYRDGLEKQKLDVL---------TVVNVEPGEVAQGKPASVTITVDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P ++ + L + E E E+DR + + F+V E + GD V + Y
Sbjct: 112 RPDFKLPDYVGLPTSVAPSEATEDEVDRVIEGMRAERAEFKVAERPAAKGDYVKLAYEGK 171
Query: 181 VDNVILEDQSKKNVQF----------IVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
+D + + + + + + + L GLK GD+K++E FP D
Sbjct: 172 IDGKPIAEIAPDKQIYSKVPQTWEEVEGANEGVIPGLGKQLAGLKVGDKKDVEIDFPADF 231
Query: 231 SI-KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+ +LAGKK + EV + ++ + ++ +IK+ E
Sbjct: 232 AAVPELAGKKAVYAAEVLEVRERVLPPLDEAFFKAQHVGNLETLKVSVRSEIKRRKEAQN 291
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
R + +RQ+ D ++ K F +PESL+E+E +L+ E + + +E +
Sbjct: 292 RAEQRRQVTDALTAKVDFPIPESLIESETQTVLRSFIEENMRRGVPQEQFEKDKKELFEG 351
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A +RV + +VL I E +EV E+++ + +Y++ R K++ L
Sbjct: 352 ARQAATKRVKSRLVLAKIAEAEKVEVNEQDIDAFIYREAMRTGQKPDKLVKMLTTDREQL 411
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRK 435
++ I DK ID ++ + +
Sbjct: 412 RAVQQSIIFDKAIDFLVSKATVTTVQ 437
>gi|325000577|ref|ZP_08121689.1| trigger factor [Pseudonocardia sp. P1]
Length = 487
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 82/479 (17%), Positives = 173/479 (36%), Gaps = 24/479 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P + L F+ + I + I GFRPGK P +++ G+
Sbjct: 1 MKSTVEHLSPTRVRINVEVPFDELKPDFDRAYKKIAQQVRIPGFRPGKAPARILEARIGR 60
Query: 61 S-ILSETIDEIIKEIVPEI-LSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ +L E ++ I E +S D RP I + E I +
Sbjct: 61 APVLDEVVNNAIPTKYQEAVVSAEDVTPIGRPDIEVTE---------IADGERIAFTAEV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
D+ P+I + D L V D EVDE+++ Q+ ++ E + GD V +D +
Sbjct: 112 DVRPEIALPDLDGLAVEVDETEVDEEQVTEQLDQLRARFGTLAGVERPATSGDYVQIDLS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD +E+ + + +G L E L G+ ++K + A
Sbjct: 172 AAVDGKEIEEATTTGFSYEIGQGGLIEGIDEALEGMSADEEKTFT----SKLVAGEHADA 227
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + V +++ A F++ + +++ Q + + ++
Sbjct: 228 DAEITVKVTTVKERHLPDADDEFAQLASEFDTLDELTENLRERLGQSKRMEQAAQARDRL 287
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
LD + +PES+V+ E + L ++ D E+
Sbjct: 288 LDKLVEGTEVPLPESVVQAEVDNRLHDAVHAFDHDEERFAEFLSSQDKTREQFDAESREE 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ V +VL + + + V ++E+ + Q ++ ++ + Q+ A
Sbjct: 348 AEKAVRYRLVLDALADSEEVSVNDQEITERILYQAQQYGMAPEQFVQQIQQAGQIGAI-Y 406
Query: 414 APIFEDKVIDHILKSVQIV---DRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+ K + +++ + V L + + VE E +
Sbjct: 407 QDVRRSKALITAVRAASVTLPNGEAVDLSDLLGDDEATDEAADEAAEGTVEGTVVEGSE 465
>gi|225164220|ref|ZP_03726494.1| trigger factor [Opitutaceae bacterium TAV2]
gi|224801159|gb|EEG19481.1| trigger factor [Opitutaceae bacterium TAV2]
Length = 441
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 91/443 (20%), Positives = 177/443 (39%), Gaps = 19/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +++L V + + + + +I + GFRPGK P + I+ Y K
Sbjct: 1 MNIEVQDVSATRKKLVVSLDAAEIAAERKAVVAEISRSVRLPGFRPGKAPAAMIEKRYAK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +I+ + E L K+ + +I I L L+ D+
Sbjct: 61 HIDDELKQKILSKSYREGLEKQKLQVIQLINIE--------GGDTIAADAPATLTLTVDV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P ++ + L T + + E++ + + F+V E ++ D V + Y +
Sbjct: 113 EPTFDLPDYTGLPTTIQPTDATDAEVEELLQNLRAERADFKVAEHPAQKSDYVKLSYEGT 172
Query: 181 VDNVILEDQSKKNVQF----------IVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
VD + + L + L GL D+K+I FP D
Sbjct: 173 VDGKPALELVGDKQIYASVPQTWEEVEGAHDGLIPGLGKHLAGLAKDDKKDIPITFPADF 232
Query: 231 SI-KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+ LAGK V +++E+ + +N + E+ A++ +++ E
Sbjct: 233 AAVPALAGKTVTYAVTVQEIRERVLPEINEEFLKAHQVETLDALKDNLRKQLTARKENAN 292
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
R +RQ+ + + +K F++P SL+E E L+ + + + +E +
Sbjct: 293 RNDQRRQVAEALCSKVEFEIPLSLIEAETQNTLRNFMEDNLRRGATPEQFEENKKELYEG 352
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+A RV T I+L I K ++VTE ++ S LYQQ R +K++ + + L
Sbjct: 353 ARKVAVTRVKTQIILSKIAAKEELKVTERDIDSYLYQQAMRTGQRPEKIVKELTQNRDRL 412
Query: 410 AELRAPIFEDKVIDHILKSVQIV 432
++ I DK ++ ++ +
Sbjct: 413 QSIQQGILFDKSLELVVSKATVT 435
>gi|295838899|ref|ZP_06825832.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|197695451|gb|EDY42384.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 465
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 85/448 (18%), Positives = 182/448 (40%), Gaps = 21/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L S + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKSSLDAAYKKINQQVTVKGFRKGKIPARIIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEGELNVLGQPEVDIKE---------LKDGELLSFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P++EI + ++V D EV E+++D+ + E+ + + E +E GD VT+D
Sbjct: 112 IRPELEIPDYTGIEVEVDPIEVAEEDVDKAVEELRERFASTSAVERAAEDGDVVTIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
V+ +LED V + +GS +L E + GL+ G E F + AGK+
Sbjct: 172 KVEGEVLEDGIASEVSYTIGSGELLDGIDEAVKGLEAG----GEATFTSELKGGSAAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N+D A F++ +R ++++ ++ + + ++L
Sbjct: 228 AEVAVKVSKVEARELPELNDDFAQLASEFDTLEELRADSRKRLENMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
D + +PE L+ +E + ++ + EE
Sbjct: 288 DKLLELVEVPIPEKLLADEIETRTHNLEHHQLPQMGLDLDKYLEIQGKTAEEFKTETEEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + + + V++EE+ L ++ + + + L
Sbjct: 348 AVKGIKTQFVLDELVSREKLNVSQEELTEHLLRRASSSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ K + ++++ + D L
Sbjct: 407 GEVARGKALATVVEAATVKDTNGEVVDL 434
>gi|220932331|ref|YP_002509239.1| trigger factor [Halothermothrix orenii H 168]
gi|254789005|sp|B8CY75|TIG_HALOH RecName: Full=Trigger factor; Short=TF
gi|219993641|gb|ACL70244.1| trigger factor [Halothermothrix orenii H 168]
Length = 429
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 111/435 (25%), Positives = 204/435 (46%), Gaps = 17/435 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ EG K EL V I R+ + + + +I GFR GKVP +++ YGK
Sbjct: 1 MEVKKEQLEGNKVELKVEIEPERVDKALEQAYRKVVKNVSIPGFRKGKVPRRVLEARYGK 60
Query: 61 SILS-ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + D ++ E + + RP IT IE +
Sbjct: 61 EVLHRDAFDILVPPAYQEAVQAAEIEPIDRPEIT---------DFYIEENKPATFSAVVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETE-SEIGDKVTVDYT 178
+ P++E+ + L + +D EV E++I+ Q+ + + + + + E E GD V +D+
Sbjct: 112 VKPEVELGEYKGLGIEKDEVEVTEEDIEAQLKSLQEQHSQLKSTDKEVVEEGDFVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + S + VGS E LVG K G++ E+E FPED+ +DLAGK
Sbjct: 172 GTIDGEEFQGGSAEEYNLEVGSGTFIPGFEEQLVGKKVGEETEVEVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
IKE+ ++++ A F++ ++ +++ E R+K++ +I
Sbjct: 232 DAVFKVDIKEIKVKETPELDDEFAKEASEFDTLEELKDDIKERLTSQKEDRARRKLEDEI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHML 353
+D ++ DVPE+LV NE + + Q + + +SS K ++ +E +
Sbjct: 292 VDRVTENAEVDVPETLVNNELDMMYQNLAYSISSYGMKVEDYLKSMGLDEESWREENREE 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++R + +VL IG+K IEVT+EE+ + + + + + + + + L L+
Sbjct: 352 AEKRAKSNLVLEAIGKKEGIEVTDEEIDNKIEEIAKD-GEQKPEQIKAYLQLQGQLEGLK 410
Query: 414 APIFEDKVIDHILKS 428
IF KVID +++
Sbjct: 411 HTIFVRKVIDFLVEH 425
>gi|54113499|gb|AAV29383.1| NT02FT0772 [synthetic construct]
Length = 438
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 100/451 (22%), Positives = 210/451 (46%), Gaps = 17/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVI + EG+ L + +P+N + ++ I + GFRPGKVP +K YG+
Sbjct: 1 MQVIVEKKEGIHCSLLIEVPANEIDSVVSKEINRTAKTIKMDGFRPGKVPAGMVKKKYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I ++I + + + A ++ + LK + ++
Sbjct: 61 QIRMEVISDLIPQKYSKAIQDEKLAVAG----------IEVELKENKEGQPLKFVANLEL 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E++ F+ ++V + + E+ +KE+ + + + K F + E DKVT+D+
Sbjct: 111 FPEFEVTGFEKIEVQKPVVELTDKEVKQMIENLRKQFATFSEVDKVVEKDDKVTIDFVGK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E + ++ I+GS + + ++G+K G+QK I FP+D+ KDLA +
Sbjct: 171 KDGEAFEGGTANDIDVIIGSGQMIPGFEDGIIGMKKGEQKTITVTFPQDYQNKDLAEAET 230
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ VN++ + G + + +++ +F++++KVK Q+
Sbjct: 231 TFDITVKKIQQAELPEVNDEFVKKFGVKGGVDTFENEIKENMQRELKFILQRKVKDQVFK 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F+ P+SL++ E + Q + +M A N S + AK++V
Sbjct: 291 GLREIAEFETPKSLIKREIDAAKQNLLKQMGGAKGFDVNQLS-----DNLFEANAKQKVE 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L +I + E E++S L + + + +K + +K +A L+A + E+
Sbjct: 346 TSLILDSIMNSQEFKAEEAEVESLLDELVQAY-EEPEKTKEQIKKNDKEIANLKALVIEN 404
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ D +L+ ++ ++ F ++ + ++
Sbjct: 405 KLTDWVLEQAKVTEKTEDFFEVIKENMQAQQ 435
>gi|162451418|ref|YP_001613785.1| trigger factor [Sorangium cellulosum 'So ce 56']
gi|161162000|emb|CAN93305.1| trigger factor [Sorangium cellulosum 'So ce 56']
Length = 422
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 82/434 (18%), Positives = 183/434 (42%), Gaps = 15/434 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + E V +P++R+ ++ ++ A ++G+RPGK P + LYG
Sbjct: 1 MQVNVEKLSPVLMEFQVEVPADRVRSEVDKAYTALQRTARVRGYRPGKAPRQVLAHLYGG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++ ++ + + L+ + + +P+I E D + +++
Sbjct: 61 RIHADVAQRLVDATLNQALADKQVQPLSQPAIAPTELRPD---------DAFSYKARFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P I ++ +V + ++ ID ++ + + + + E E +
Sbjct: 112 RPDIAEVKWEGFEVKRPSTTPTDEMIDAEITALRREHSTLQAPEPERPAAKGDVATIAFT 171
Query: 181 VD-NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++ L D ++ ++ +GS +F E + L G+ G K++ F E HS DL GK+
Sbjct: 172 LEVGGALRDTKEQEIETELGSGQVFKEIEDALAGMTPGQSKDVPVTFSEQHSNADLRGKQ 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K++ + V+++ A G ES SA+R +K+++ V Q++
Sbjct: 232 ATFHITLKDLRERIFPEVDDEFAKDCGDESLSALRESLRKKLEKELTQRASDAVAEQLVV 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ VP SLV+ + +++ Q+ + A+ +V
Sbjct: 292 ELCKANPIPVPPSLVDQQAQLAERELLATARRQGQRVDPTPE----FRARVRLDAEMKVR 347
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G+V+ I + + +TE +++ + + + K+ +++ P I ED
Sbjct: 348 AGLVMAEIAKAKAVRITEADLEKGYEELAEQTGKNVAKIKAEYRE-PQKRELFAGMILED 406
Query: 420 KVIDHILKSVQIVD 433
K++D I + ++ D
Sbjct: 407 KILDIIEAAAKVAD 420
>gi|323140769|ref|ZP_08075688.1| trigger factor [Phascolarctobacterium sp. YIT 12067]
gi|322414787|gb|EFY05587.1| trigger factor [Phascolarctobacterium sp. YIT 12067]
Length = 427
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 88/438 (20%), Positives = 188/438 (42%), Gaps = 19/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L + P+ + + + ++ I +ANI GFR GK P + I+ YGK
Sbjct: 1 MNVTVERVEN-EATLKITAPAAEVNAGYKKAVQKIADQANIPGFRKGKAPRAIIEMHYGK 59
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E + + + E L++ P + E D++L +
Sbjct: 60 EAVKQEAFEIVANKAYSEALNQEKLIPVSDPKVE---------ESTFEEGKDMELTIKVT 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
+ P+ E+ + L V + EV ++++D Q+ ++ + + E GD +D+
Sbjct: 111 LKPEPELGEYKGLHVEKKEVEVTDEQVDAQIKDMMGRDAKMVVAEEGAVIEKGDFAIIDF 170
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+VD K VGS + LVGL GD ++E FPED+ +KDLAG
Sbjct: 171 AGTVDGEPFSGGEGKGYPLEVGSNSFIPGFEDQLVGLSKGDSTDVEVTFPEDYFVKDLAG 230
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDL-AVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ +I++V +N++ A + F++ +R +++++ +E + + + +
Sbjct: 231 KEAIFKVNIQDVKRKELPELNDEYVASKTEFKTVEDLRANYKERMQKAAEANAKAEYEHE 290
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++D F VPE ++E++ + ++++++ + S + +
Sbjct: 291 LIDLAVANAKFSVPEIMIEDKISQMVEEMKMSLESRKMSLDMYMQYTGLDMAKIRENQRP 350
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
+A+ V T +VL I + +I+V ++ + + + +++ + + L
Sbjct: 351 VAEENVKTDLVLDAIAKAEDIQVDMADVDAEIAAISAQHGASPEEVKKIIKGN-GTMGLL 409
Query: 413 RAPIFEDKVIDHILKSVQ 430
A I K ++ S +
Sbjct: 410 LANILRRKAAHVVIDSAK 427
>gi|297583713|ref|YP_003699493.1| trigger factor [Bacillus selenitireducens MLS10]
gi|297142170|gb|ADH98927.1| trigger factor [Bacillus selenitireducens MLS10]
Length = 433
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 90/437 (20%), Positives = 188/437 (43%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L V + S R ++ +E + + + N+ GFR G+VP + +G
Sbjct: 1 MTANWEKQEGNTGVLSVEVSSERFDNALDEAFKKVVKQVNVPGFRKGRVPRQIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ID ++ E + +++ +P I+I++ +E LK +
Sbjct: 61 ESLYQDAIDLVLPEAYTQAVNEAGIEPVDQPDISIDQ---------VEKGSALKFTATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+ P++E+ + L+V EV ++E+D+++ + + E E GD V +D+
Sbjct: 112 VKPEVELGDYKGLEVEAQPVEVTDEEVDQEIEATREKHADLIAIEDGEVAKGDTVVMDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS + LVG K G+ E+ FPED+ +DLAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEIGSGQFIPGFEDQLVGAKQGEDAEVNVEFPEDYHSEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ ++++ A FES + ++ +K+++ + K
Sbjct: 232 PALFKVKVHDIKRKDLPELDDEFAKDVNEEFESFADLKKDIREKLEKTKKDEADMAKKDS 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+++ + T +VP ++VE E + +L++ + + +E +
Sbjct: 292 LVEQATENATIEVPSAMVETEKDRMLEEFSQRLQAQGMTMDMYYQFAQTDEEGMKAQFSG 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I EK +I+V++E ++ + + + + +L
Sbjct: 352 DAEKRVRMNLTLEAISEKEDIQVSDEAVEEEIEKMAEMYG-RPADEIKQILMMQGGTDQL 410
Query: 413 RAPIFEDKVIDHILKSV 429
+A + K ID + +
Sbjct: 411 KADLRIRKAIDLLAEEA 427
>gi|229821080|ref|YP_002882606.1| trigger factor [Beutenbergia cavernae DSM 12333]
gi|259533554|sp|C5BXG1|TIG_BEUC1 RecName: Full=Trigger factor; Short=TF
gi|229566993|gb|ACQ80844.1| trigger factor [Beutenbergia cavernae DSM 12333]
Length = 470
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 76/482 (15%), Positives = 187/482 (38%), Gaps = 38/482 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E + +L V + + L S + + I + N+ GFR GKVP I G+
Sbjct: 1 MKSAVENLEPTRVKLTVEVAFDELKASLDHAYQHIAQQVNVPGFRKGKVPPRVIDQRVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ +++ + + + +++ + + +P + + + +L D
Sbjct: 61 AAVVEHAVNDALPDFYRQAVTESELKVLGQPEVEVT-------GVPDTTSGELTFTAEVD 113
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P + + DL++ D V + ++ ++ + + + +E GD V +D T
Sbjct: 114 VRPDFTLPALADLELEVDDVAVTDDDVAERLDLLRQRYGTLTGVDRAAETGDYVVIDMTA 173
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D ++ S V + +GS ++ E LVGL + F + D AG+
Sbjct: 174 TIDGEEVDTVSG--VSYEIGSGNMLDGLDEALVGLAADET----ATFSAPLAGGDRAGEA 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++ V ++D A F++ ++ +I + + ++L
Sbjct: 228 ADVSVTVTAVKVQELPEADDDFAQLASEFDTLEELQADLRTQISDAKVNNQAVQARDRLL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + F +P+ ++E E + L+ D+E + A + +
Sbjct: 288 EKLVEATDFPLPQGVIEAEIHRHLES-------------EGRLEDDEHREEVREEATQAL 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + ++ +++V + E+ L + ++ + + + K + A +
Sbjct: 335 RRQLVLDVLADQVSVQVNQNELVEFLLRTAQQYRVDPNEFITNADKT-GQIPSFVAELAR 393
Query: 419 DKVIDHILKSVQIVDRK---------VTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+K + L+ V++VD + ++ + E + S +EE
Sbjct: 394 NKSLAVALRDVRVVDASGNAVDLTSFIGSEETDAEDAAEGVESVEVDLSAAAEDDAEETS 453
Query: 470 SE 471
E
Sbjct: 454 DE 455
>gi|302519067|ref|ZP_07271409.1| trigger factor [Streptomyces sp. SPB78]
gi|318060123|ref|ZP_07978846.1| trigger factor [Streptomyces sp. SA3_actG]
gi|318076381|ref|ZP_07983713.1| trigger factor [Streptomyces sp. SA3_actF]
gi|302427962|gb|EFK99777.1| trigger factor [Streptomyces sp. SPB78]
Length = 462
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 85/448 (18%), Positives = 183/448 (40%), Gaps = 21/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L S + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKSSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEGELNVLGQPEVDIKE---------LKDGELLSFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P++EI + ++V D EV E+++D+ + E+ + + E +E GD VT+D
Sbjct: 112 IRPELEIPDYSGIEVEVDPIEVSEEDVDKAVEELRERFASTSAVERAAEDGDVVTIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
V+ +LED V + +GS +L E + GL+ G E F + AGK+
Sbjct: 172 KVEGEVLEDGIASEVSYTIGSGELLDGIDEAVKGLEAG----GEATFTSELKGGSAAGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + +N+D A + F++ +R ++++ ++ + + ++L
Sbjct: 228 AEVAVKVSKVEARELPELNDDFAQMASEFDTLEELRADSRKRLENMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
D + +PE L+ +E + ++ + EE
Sbjct: 288 DKLLELVEVPIPEKLLADEIETRSHNLEHHQLPQMGLDLDKYLEIQGKTAEEFKTETEEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + + + V++EE+ L ++ + + + L
Sbjct: 348 AVKGIKTQFVLDELVSREKLNVSQEELTEHLLRRAASSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ K + ++++ + D L
Sbjct: 407 GEVARGKALATVVEAATVKDTNGEVVDL 434
>gi|319941574|ref|ZP_08015900.1| ATP-dependent Clp protease proteolytic subunit [Sutterella
wadsworthensis 3_1_45B]
gi|319804944|gb|EFW01786.1| ATP-dependent Clp protease proteolytic subunit [Sutterella
wadsworthensis 3_1_45B]
Length = 453
Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 77/436 (17%), Positives = 190/436 (43%), Gaps = 16/436 (3%)
Query: 11 LKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEI 70
L+R L++ +PS ++ + + + A + GFR G VP+ ++++YG E ++E+
Sbjct: 28 LERTLELSVPSAQVRELAQKHLRGYAKDARMPGFRKGHVPMKQVEAMYGMRAFDEALNEL 87
Query: 71 IKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFD 130
+ + + + A P + E G ++ +++ P+I F
Sbjct: 88 VGQAWSKAAQASGLQIAGAPKVEAVE-------GANGDEETMRFTAKFEVFPEITYPDFK 140
Query: 131 DLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYTVSVDNVILED 188
L + + VD+ ++ + + K V + + ++ D+VTV++T + + +
Sbjct: 141 ALNLKRYTSTVDDAAVEETINVMRKQRVTYTEAAADRAAQKDDRVTVNFTGTKEGIEFPG 200
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKE 248
+ QF++GS + +E + G+K G+ K + FP+++ DL G V+ + +
Sbjct: 201 GKAEGFQFVIGSGRMLAEFDAAVAGMKAGESKTFDLTFPKEYGPADLNGATVQFLVEVTK 260
Query: 249 VFSPLPVVVNNDLAVRLGFES-ESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
V P ++++ A LG + +AMR + +++ + + Q+ ++ + TF
Sbjct: 261 VEEPHFPTIDDEFAQSLGVKDGVAAMRADVKKNLEREVSYRLEQRTAAEVFSALDKVLTF 320
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTI 367
VP ++VE E + Q+ M S +++ + + A ++ G+ + +
Sbjct: 321 PVPAAVVEEERRAMAQQYAQAMRSRG-----LEAPKDIPDSMFQEPAVKKARVGLFISEV 375
Query: 368 GEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILK 427
++ + T+E++ + + + +++ + + + + E+ V + +L
Sbjct: 376 VQREKLTATDEQITARAQSIAASY-ENPAEVVQYLTTDRQSRVNVAMQVQEENVTNWLLG 434
Query: 428 SVQIVDRKVTFDQLFD 443
+ V FD++
Sbjct: 435 QATTEEVPVEFDKVMK 450
>gi|78357265|ref|YP_388714.1| trigger factor [Desulfovibrio desulfuricans subsp. desulfuricans
str. G20]
gi|119370895|sp|Q30Z77|TIG_DESDG RecName: Full=Trigger factor; Short=TF
gi|78219670|gb|ABB39019.1| trigger factor [Desulfovibrio desulfuricans subsp. desulfuricans
str. G20]
Length = 438
Score = 195 bits (494), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/438 (21%), Positives = 191/438 (43%), Gaps = 13/438 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +K+++ + +P + + I ++ N+ GFR GKVP S I+ + K
Sbjct: 1 MEYNVEDLSPVKKKITITVPVEEVNAALAATIAVYQTSVNLSGFRKGKVPASIIEGRFRK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E +++ + E++ D + A R D G +E + +S+++
Sbjct: 61 EVYNEATQDLVNVHINEVVGSLDTQPASR---------IDFDGGQLERDKEFVYTISFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
+P E+ +D ++V Q+ EVDE E++ + I N + ++ G+ +D+
Sbjct: 112 MPVFEMPDYDGMEVEQEKPEVDENEVNAVLERIRTNLADVVTVAEHRPAKDGEIAVLDFA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + + N + +G + E++ G+ E + FPED + AGK
Sbjct: 172 AYENGEPIAGVAADNFELNLGGNQALVDFEELVKRAVPGEATEGDVTFPEDFINPEFAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + ++ V ++++LA + GFES MR Q + L + + ++ +
Sbjct: 232 TVTMKVTVHAVKERKLPELDDELAKKAGGFESFDKMRETVEQSYLESRTQLCKAQAQKTM 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D + F VPES++E + +L + + + + +++ EE A+
Sbjct: 292 VDSLLKTLDFPVPESMLEMYMDSLLAEKKDRLERQGKSLESLGKSPEELRDEVRPEAEHI 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
T I L +K + V+E+E+ L Q R + M +H+ + N + LR +
Sbjct: 352 ARTQIFLVKAAQKEGVTVSEQEVDRQLQQIAMRSGQDFQTMKEHYTRT-NMIFNLRDRML 410
Query: 418 EDKVIDHILKSVQIVDRK 435
DK ++ I + I +
Sbjct: 411 ADKAMEAIYEKAAIKEVP 428
>gi|149192588|ref|ZP_01870748.1| trigger factor [Vibrio shilonii AK1]
gi|148833576|gb|EDL50653.1| trigger factor [Vibrio shilonii AK1]
Length = 388
Score = 195 bits (494), Expect = 2e-47, Method: Composition-based stats.
Identities = 81/404 (20%), Positives = 191/404 (47%), Gaps = 18/404 (4%)
Query: 47 GKVPLSHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLI 106
GKVP+ + +YGK++ + + E+++ E + A P+ E
Sbjct: 1 GKVPMKMVAQMYGKAVRQDVMGEVMQRHFIEAIVSEKINPAGAPTFAPVEN--------- 51
Query: 107 EGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETE 166
E DL ++++ P++E+ +++ V + EV++ +++ + + K + E
Sbjct: 52 EAGKDLVFTATFEVYPEVELKGLENIVVEKPATEVNDADVEEMIDTLRKQQATWTDVEEA 111
Query: 167 SEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFF 226
+E G +VT+D+T S+D E +N +G+ + + + G G + EI+ F
Sbjct: 112 AEDGKRVTIDFTGSIDGEEFEGGKAENFPLEMGAGRMIPGFEDGIQGKTAGMEFEIDVNF 171
Query: 227 PEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQH 284
PED+ ++L GK + + +V + VN++ + G A++ + +++
Sbjct: 172 PEDYHAENLKGKAAKFLIKVNKVEARELPEVNDEFVAKFGVAEGGVDALKAEVRKNMERE 231
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE 344
+ ++ ++K Q LD + + DVP +L++ E + Q+ + +Q +
Sbjct: 232 LKQAIKNRIKEQALDGLVKENDIDVPAALIDQEIGALRQQAAQRFGGNPEAAQQL----- 286
Query: 345 EDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQK 404
+ + AKRRV+ G++LG + + +E ++E+++ + + + +++ ++++
Sbjct: 287 -PRELFEEQAKRRVVVGLLLGEVIKSEELEASDEKVKELISEMATAY-EDPSEVISYYEQ 344
Query: 405 YPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
+ +R E++ ID IL Q+ D++V+F++L + +
Sbjct: 345 NEQMMNNMRNVALEEQAIDAILAKAQVSDKEVSFNELMNQQPAA 388
>gi|327334164|gb|EGE75878.1| trigger factor [Propionibacterium acnes HL097PA1]
Length = 530
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 82/482 (17%), Positives = 189/482 (39%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPALVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV ++++D ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAAKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LED + V + VGS + E + GLK G+ E L G+
Sbjct: 172 TRDGETLEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEF----HSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P +L+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPTNLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I K + ++ + + D K +L + + + +E+A +
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSAEKADGK 466
Query: 472 IS 473
+
Sbjct: 467 AT 468
>gi|313673005|ref|YP_004051116.1| trigger factor [Calditerrivibrio nitroreducens DSM 19672]
gi|312939761|gb|ADR18953.1| trigger factor [Calditerrivibrio nitroreducens DSM 19672]
Length = 443
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 82/448 (18%), Positives = 194/448 (43%), Gaps = 15/448 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ +E ++ L++ +P T++F +++ I + GFR GK P ++ +
Sbjct: 1 MKFNLTDAENSQKLLEIELPYETYTEAFEKQLSKIMPTVKLPGFRVGKAPRDMVRKEFKH 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + ++E I E + + + + P + + E + ++ D+
Sbjct: 61 KLSVQALEETINEAISKAIKESGVVPLNIPMV---------KDVVFEDDKPITFKVYVDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
P +E+ ++ ++I V E +I+ + + + + +E + TE + GD+V +D+
Sbjct: 112 YPSVELKNYKGFDFEREIRVVTEDDINEVLENLREQHAIWEVAPEGTEVKEGDRVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + E S N +GS ++G+K G+ K+I FPE++ DLAG+
Sbjct: 172 GKKNGEVFEGGSANNHTLEIGSNTFIPGFESGIIGMKKGETKDIVVTFPENYHAADLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLA--VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+V + ++ E+ + +N++ A V E+ + + I +E + ++
Sbjct: 232 EVTFSVTVNEIKNKKLPDLNDEFATTVDPNVENLEKLIETIRKDIMDETEIVNKENFYDI 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSS-ANQKSQNVDSIDEEDLQYYHMLAK 355
++ + + FD+P+S+++ + + + + ++ ++ Y A
Sbjct: 292 LIKKLVEENPFDLPQSMIDEQSRNLADRAIKNYCRAYGIDPKTLNFDPDKIKDQYKEQAI 351
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ I+L I EK NI VT+E++ + + ++ D K ++ ++
Sbjct: 352 LQTKGAILLNAIAEKENIAVTDEDLDKKIAEYAEALKMKPEEYRDLAIKN-GTISTIKNN 410
Query: 416 IFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ DK+ D + I D+ +T +L +
Sbjct: 411 VLVDKIYDFLCSVNNITDKTITLKELRE 438
>gi|315650621|ref|ZP_07903681.1| trigger factor [Eubacterium saburreum DSM 3986]
gi|315487118|gb|EFU77440.1| trigger factor [Eubacterium saburreum DSM 3986]
Length = 446
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 80/439 (18%), Positives = 185/439 (42%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + E +L V + + + E + +++ N+ GFR G + S + +YG
Sbjct: 19 MSVEVQKLEKNMAKLTVTVEAKEFDKAIAESFKKNKNRFNVPGFRKGHITQSIFEKMYGA 78
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
S++ + ID + P + RP I I ++ D
Sbjct: 79 DSLIPDAIDFALDVSYPGAARESGLEIVSRPQIDIK---------NVKKGEDFVYEALIA 129
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++E+ + ++V + V++ +I + + N V+ E GD +T+D+T
Sbjct: 130 VRPEVELGEYKGIEVKKADEVVNDDDIASALRSEQEKNARLITVEGRPVESGDNITLDFT 189
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + + ++GS + ++G G+ ++ FPE++ +KDLAGK
Sbjct: 190 GSIDGVPFDGGKGEGYPLVIGSGTFIPGFEDQIIGHNAGEDFDVNITFPENYQMKDLAGK 249
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
N +K++ +++D A F++ + +++ + + + I
Sbjct: 250 AAVFNCKVKDIKKKELPELDDDFASEISEFDTLDEYKEDLRKQLAEAKAKRAATENENAI 309
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL----QYYHML 353
+D + D+P+ +V+ + G++ M S I +
Sbjct: 310 VDKLIEISNMDIPDPMVDAQVEGLVADYGRRMESQGITLDQYFQITGMSRADLSNQFKPQ 369
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +++ T +VL + ++ NI+++E+E+ + + + + +K+ F ++ ++
Sbjct: 370 ALKQIKTRLVLEEVAKRENIQISEDEINAEIKKVADNYKMDVEKIKGLFGEHE--RKQMS 427
Query: 414 APIFEDKVIDHILKSVQIV 432
+ K ID ++++ ++V
Sbjct: 428 DDLAVQKAIDFLVENAKLV 446
>gi|257439815|ref|ZP_05615570.1| trigger factor [Faecalibacterium prausnitzii A2-165]
gi|257197724|gb|EEU96008.1| trigger factor [Faecalibacterium prausnitzii A2-165]
Length = 438
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 73/443 (16%), Positives = 185/443 (41%), Gaps = 20/443 (4%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
+ + E EL I + + + + K ++ GFR GK P S I+ +YG +
Sbjct: 4 IKCEKLEKSMAELQFSIDAEAFKGAVADVFKKEGKKYSVPGFRKGKAPRSLIEKMYGADV 63
Query: 63 L-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ I+E+ + + RP ++++ T + L + ++
Sbjct: 64 FTYDAINELFPAAYEAAVKEAGIEPVGRPEVSVD---------AASETEGVTLTVKVAVM 114
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++++ +++ L V + + V ++ +D ++ + + N +E +E GD +D+ V
Sbjct: 115 PEVKVGNYNGLTVEKTVHTVTDEAVDAELKRVQERNARELTREGAAENGDIADIDFEGFV 174
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V E ++ +GS + +VG G++ ++ FPE++ +LAGK
Sbjct: 175 DGVAFEGGKAEHYNLTLGSGSFIPGFEDQIVGHSAGEEFDVNVTFPEEYQAAELAGKAAV 234
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ EV ++++LA +++ + + ++ + V+ ++D
Sbjct: 235 FKIKLHEVKYKELPALDDELAKDCSEYDTLEEFKESIRKNNQEQLDKQDDLAVENALVDQ 294
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAKR 356
+ ++P+++ + + ++ F + + ++ ++ + A++
Sbjct: 295 VIESMEAEIPQAMYDTRMDEMVNDFAFRVEQQGLRLEDYLKYMGQTMDQFRASFMPQAEK 354
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V + L + NIE +EE++ + + + ++ E K+ + + +L+ +
Sbjct: 355 QVKIRLALEAVAAAENIEASEEDVSAEIKRIADQYKMEEDKVRELVN-----VDDLKKDL 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFD 439
+K ID I IV++ +
Sbjct: 410 AINKAIDFIKSHANIVEKAAEAE 432
>gi|224476766|ref|YP_002634372.1| trigger factor [Staphylococcus carnosus subsp. carnosus TM300]
gi|254789020|sp|B9DNC1|TIG_STACT RecName: Full=Trigger factor; Short=TF
gi|222421373|emb|CAL28187.1| trigger factor [Staphylococcus carnosus subsp. carnosus TM300]
Length = 440
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 86/440 (19%), Positives = 191/440 (43%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + NI GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNQGVLSVTVPAKKVDQAIDQAFKKVVKQVNIPGFRKGKVPRQIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + + +P I +N+ IE DLK +
Sbjct: 61 EALYQDAVDILLPEAYGEAIEETGIKPVDQPEIEVNQ---------IEKGKDLKFDATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++++ + L++ + ++ ++E+ + + ++ E GD V +D+
Sbjct: 112 VQPEVKLGEYKGLEIEKQNADLTDEELQEAIDHSLGHLAEMVIKEDGSVEEGDTVNIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E ++ +GS E LVGLKTGD+K+++ FPE++ ++LAGK
Sbjct: 172 GYVDGEQFEGGQAESYDLEIGSGMFIPGFEEQLVGLKTGDEKDVKVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ I E+ +++++A ++ + +++ + + K +
Sbjct: 232 EATFKVKINEIKYKNVPELDDEIANELDSDADNVEEYKENLRKRLSEEKKVNAENVEKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
++ N D+PE+++ NE + ++Q+ + + + + + +
Sbjct: 292 AINKAVNNAEVDIPEAMINNELDRMMQEFAQRIQQSGLNLETYFQISGQDESQLREQMKD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ RV T + L I +E TEE++ L +F + + +
Sbjct: 352 DAEERVKTNLTLNAIANAEEVEATEEDIDKELEAMSTQFNISVEDIKKTLGST----DIV 407
Query: 413 RAPIFEDKVIDHILKSVQIV 432
+ + KVID +L ++V
Sbjct: 408 KDDVRVKKVIDLLLDDAKLV 427
>gi|145642385|ref|ZP_01797945.1| trigger factor [Haemophilus influenzae R3021]
gi|145272928|gb|EDK12814.1| trigger factor [Haemophilus influenzae 22.4-21]
Length = 357
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 73/371 (19%), Positives = 171/371 (46%), Gaps = 17/371 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + +E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAIHEEFKRAAKNVCVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + ++ D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDIAKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKVENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + DVP S+VE E N + + N + + + A RRV
Sbjct: 292 NGLIEQNPIDVPASVVEEEINVLRNQAAQRFGG------NTQQAAQLPRELFEAEATRRV 345
Query: 359 LTGIVLGTIGE 369
G++ + +
Sbjct: 346 QVGLLFSEVIK 356
>gi|320094143|ref|ZP_08025956.1| trigger factor protein [Actinomyces sp. oral taxon 178 str. F0338]
gi|319978945|gb|EFW10475.1| trigger factor protein [Actinomyces sp. oral taxon 178 str. F0338]
Length = 450
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 77/456 (16%), Positives = 180/456 (39%), Gaps = 36/456 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E + L V +P L ++ +DI + NI GFR G VP I +G+
Sbjct: 1 MKSSVETLEPTRVRLTVEVPFEELKSEMDKAYKDIAGQVNIPGFRKGHVPPRIIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ++E++ ++ D R +P + + E I + L
Sbjct: 61 AAVIEQVVNEVLPGHYSSAVASNDLRPMAQPEVEVTE----IPNTTGPQGGQLVFTAEVA 116
Query: 120 ILPQIE-ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
++P E + + ++V D EV ++++D+++ E+ + + + GD T+D
Sbjct: 117 VVPPFELPAIDESIEVVVDSAEVADEDVDKELEELRGRFATLKTVDRAAAAGDFTTIDLV 176
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ ++ S +V + +GS D+ E L G GD+ D G+
Sbjct: 177 ARIGGEEVDSVS--DVSYEIGSGDMLDGQDEALSGASAGDEVAFTAVL----KGGDHEGE 230
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ ++K V ++D A F++ + ++ Q E + + ++
Sbjct: 231 EAEVSLTVKSVKVRELPTADDDFAQMVSEFDTIGELTEDLREQAAQSKESQQALQARDRL 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D + + +PES VE+E + ++ + D R
Sbjct: 291 IDLLLERVEIQLPESAVEHELSHRVEAA----------------GESADQDALRAEVVRE 334
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + ++ + ++ +++V+++E+ Q + ++ P ++ + A +
Sbjct: 335 MRSELLSEAVAKEFDVQVSQQELIDYAIQMSQNYGVD----INQLFSSPQQMSNVVADLG 390
Query: 418 EDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSP 450
K + LK V + D +V + F ++
Sbjct: 391 RSKALIEALKRVTVKDSSGAEVDLSKFFGEDPAAAE 426
>gi|315095049|gb|EFT67025.1| trigger factor [Propionibacterium acnes HL060PA1]
Length = 515
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 82/482 (17%), Positives = 188/482 (39%), Gaps = 23/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLDQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV ++++D ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAVKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LED + V + VGS + E + GLK G+ E L G+
Sbjct: 172 TRDGEALEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEF----HSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P +L+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPTNLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + IVL + + + I V + E+ L+++ + ++ H ++ N L +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPEEEAQHMMQH-NHLPD 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I K + ++ + + D K +L + + + E+ S+
Sbjct: 407 WMQEIRRGKALASMVGAATVTDSKGNALELDRIQPDGTIADKQAEEDAPAEDSVEKVDSK 466
Query: 472 IS 473
+
Sbjct: 467 AT 468
>gi|305680793|ref|ZP_07403600.1| trigger factor [Corynebacterium matruchotii ATCC 14266]
gi|305658998|gb|EFM48498.1| trigger factor [Corynebacterium matruchotii ATCC 14266]
Length = 450
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 72/442 (16%), Positives = 171/442 (38%), Gaps = 30/442 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++ V +P LT+ ++ + I + NI GFR GK P I + +G+
Sbjct: 1 MKSSVEKLNDTRVKMTVEVPFEELTNEIDQAYKTIAASVNIPGFRKGKAPRKLIDARFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + +++ + +++ +P + + + IE ++ D
Sbjct: 61 GPVLEQVVNDALPSRYEAAIAENQLVPLGQPKLDLTK---------IEDGDVIEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P I + F ++ V +E+ +++++ + + + + VT+D
Sbjct: 112 VRPDITLPDFTEVSVQVPALGDEEEAVNKELDRLRERFAELTDVDEPVAEDNFVTIDIKA 171
Query: 180 SV-DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ ++D + + + VGS DL + ++G GD+
Sbjct: 172 VDAEGNPVDDLAADALSYQVGSKDLMDGLDDAIIGKNKGDEVTFTENDN----------- 220
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +I V V+ D F++ +R ++ + + ++ +
Sbjct: 221 --TITVTINAVKHRTLPEVDEDFVQLASEFDTVDELRADLREQAVAYLKNEQAGAIRDAV 278
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSS----ANQKSQNVDSIDEEDLQYYHML 353
LD + F+VP +V+ + + L ++ E++ N+ + +S E+ +
Sbjct: 279 LDKVLADTPFEVPAGMVDEQAHAALHQIFGELAHDEDFMNRVLEAQNSSMEQFMAESKQH 338
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ + I L + E+ EV+++E+ + + ++ + K N L L
Sbjct: 339 AEKDLRVQIFLDVLAEQEKPEVSQQELTEHIVFTARSYNMSPEEFMSQVTK-GNQLGALF 397
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
A I K + L V + D
Sbjct: 398 ANITRGKALAAALCRVNVTDET 419
>gi|125975221|ref|YP_001039131.1| trigger factor [Clostridium thermocellum ATCC 27405]
gi|256003117|ref|ZP_05428109.1| trigger factor [Clostridium thermocellum DSM 2360]
gi|281419195|ref|ZP_06250211.1| trigger factor [Clostridium thermocellum JW20]
gi|166229040|sp|A3DJ09|TIG_CLOTH RecName: Full=Trigger factor; Short=TF
gi|125715446|gb|ABN53938.1| trigger factor [Clostridium thermocellum ATCC 27405]
gi|255992808|gb|EEU02898.1| trigger factor [Clostridium thermocellum DSM 2360]
gi|281407061|gb|EFB37323.1| trigger factor [Clostridium thermocellum JW20]
gi|316939385|gb|ADU73419.1| trigger factor [Clostridium thermocellum DSM 1313]
Length = 428
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 77/438 (17%), Positives = 186/438 (42%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + EL++ + + + ++ + K + GFR GK P S I+ YGK
Sbjct: 1 MVVKVEKKDKNIVELEIEVEAAKFEEAVQKSYLKNSKKFTVPGFRKGKAPRSIIERYYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + I+ + + + + + D RP+I+I + I +L S
Sbjct: 61 EVFYEDAINIVCADAYDKAIEENDIFPVDRPTISIKK---------IGEGENLVFTASVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++E+ + ++V + V ++++++++ +A+ N V++ + GD V +D+
Sbjct: 112 VKPEVELGEYKGVEVEKVEVNVTDEDVEKELKAVAEKNARIMSVEDRGIQKGDIVDIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E VGS + L+G + GD E+ FPED+ K+LAGK
Sbjct: 172 GFIDGEPFEGGKASGYVLEVGSGTFIDGFEDQLIGGRPGDDIEVNVTFPEDYGKKELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +V ++++ A F++ + +K+ + +E + +++ ++
Sbjct: 232 PALFKVIVNDVKVKELPAIDDEFAKDVSEFDTLEEYKESIRKKLTEAAEHRAKHELEDKV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ + D+P+ ++E + + +++ ++ I +
Sbjct: 292 VAKVVENAQVDIPDVMIERQIDSMVRDYNMRLNYQGLDLDKYLMIMGIDYQTFRNQLRDR 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + +VL + + +I+V++EE+ + + + H + + ++
Sbjct: 352 AHDDIKRQLVLEKVAKVEDIKVSDEEINEEAEKIAKSYNMEHEDFKKHLRDDD--IEYIK 409
Query: 414 APIFEDKVIDHILKSVQI 431
A I K +D ++++ +I
Sbjct: 410 ATILFKKAVDFLVQNAKI 427
>gi|269955918|ref|YP_003325707.1| trigger factor [Xylanimonas cellulosilytica DSM 15894]
gi|269304599|gb|ACZ30149.1| trigger factor [Xylanimonas cellulosilytica DSM 15894]
Length = 449
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 71/454 (15%), Positives = 167/454 (36%), Gaps = 31/454 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + E K +L V + + L S + + I + I GFR GKVP I G
Sbjct: 1 MKSAVETLEPTKVKLTVEVDYDELKPSIDHAYKHIAEQVTIPGFRKGKVPPRIIDQRVGW 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ ++E + + +++ R +P++ + E + G ++ +
Sbjct: 61 GAVVEHAVNEDLGRFYGQAAAEQKLRPLGQPNVEVTEIPAKAGEGSLK------FTAEVE 114
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ L +T + EV + ++ ++ + + + + GD V VD
Sbjct: 115 VRPEIELPELSTLDITVESTEVADADVTERLDALRERFGTLVGVDRPAVEGDYVVVDLKA 174
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + ++ S + + +GS ++ E L GL + + D AG++
Sbjct: 175 VIGDEEVDSVSG--ISYQIGSGNMLEGLDEALTGLSADETTTFTAPL----AGGDHAGEE 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V ++D A F++ + +++ + + +L
Sbjct: 229 ATVTVTATSVKQRDLPEADDDFAQLASEFDTLDELTADLREQVASIKKSNQAVTARDALL 288
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP VE E + L+ D+ + A +
Sbjct: 289 EKLLAAVEIPVPSGAVEAEVHRHLEG-------------EDRLEDDAHRAEVTVDATAAL 335
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L T+ EK ++V + E+ L Q ++ ++ + + + + +
Sbjct: 336 KNQILLDTLAEKLEVKVGQGELVEYLVQASRQYGMEPQQFIQTLDQ-GGQIPAMVGEVAR 394
Query: 419 DKVIDHILKSVQIVDRK---VTFDQLFDNSSESS 449
K + L+ + + D + V + + +
Sbjct: 395 SKALAVALRQIDVKDGEGNVVDLSEFIGSDDADT 428
>gi|319892722|ref|YP_004149597.1| Cell division trigger factor [Staphylococcus pseudintermedius
HKU10-03]
gi|317162418|gb|ADV05961.1| Cell division trigger factor [Staphylococcus pseudintermedius
HKU10-03]
gi|323464245|gb|ADX76398.1| trigger factor [Staphylococcus pseudintermedius ED99]
Length = 438
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 86/441 (19%), Positives = 188/441 (42%), Gaps = 21/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ + + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLQVSVPAEEVDKALDQAFKKVVKQLNVPGFRKGKVPRQIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ + E + + +P I + + IE +
Sbjct: 61 EALYQDAVDILLPKAYSEAVQETGINPVDQPEIEVTQ---------IEKGQPFTFDATVI 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + EV E E ++ + + ++ + E GD V +D+
Sbjct: 112 VEPEVQLGDYKGLEIEKQNTEVTEDEFNKAVEQRLDAMTDMVVKEDGQVEEGDTVNLDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +GS E LVGLK G++KE+E FPE++ ++LAGK
Sbjct: 172 GYVDGEQFEGGQAEGYDLEIGSGMFIPGFEEQLVGLKVGEEKEVEVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + ++++LA + + Q++++ + K +
Sbjct: 232 PAVFKTKINEIKAKEVPELDDELASELDSNANNVEEFKANLRQQLEEQKKTDAENAQKEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHM 352
+ ++ T D+PE++V E + ++ + + N Q +++ +
Sbjct: 292 AITLATDNATIDIPEAMVRTEQDRMMSEFAQRIQQQGLDLNTYFQISGQSEDDLREQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ RV T + L I + NIEVT+E++ L +F + + +
Sbjct: 352 DAELRVKTNLTLAAIADAENIEVTDEDVDKELETMSEQFNISVEDIKKTL----GNTDLV 407
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + KVI+ ++ ++V+
Sbjct: 408 KNDVRVKKVINLLVDEAKLVE 428
>gi|291528436|emb|CBK94022.1| trigger factor [Eubacterium rectale M104/1]
Length = 443
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 78/436 (17%), Positives = 181/436 (41%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + + + L + + + + + ++ GFR GKVP + I+ +YG
Sbjct: 1 MSVQVENLEHNMAKLTIEVAAEELEKALDSAYQKQKKQISVPGFRKGKVPRAMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + ++++ + + RP++ + + IE
Sbjct: 61 GVFYEDAANILMQQTYAGAVDESGVDIVSRPTVEVTQ---------IEKGQPFIYTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++ + + + VT+ V ++E+D ++ N + GD +D+
Sbjct: 112 VRPEVTLGKYMGVTVTKIDTSVSDEEVDAELENQRNKNARTVTVTDRPVAEGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N +GS + LVG TGD+ E+ FPE + DLAGK
Sbjct: 172 GFVDGVAFEGGKGENHPLEIGSHTFIDTFEDQLVGKNTGDEVEVNVTFPEKYQAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I E+ + ++++ A G ++ + + + + + E ++ + +
Sbjct: 232 PATFKVKINEIKAKELPELDDEFAQDAAGVDTLAEYKEEIKKNLTEKKETEAKKTKEDEA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ I +K D+PE+++E + ++++ ++ + + ++
Sbjct: 292 IQKIIDKSKMDLPEAMIETQCETMVEEFAQRIAQSGLTMEQYLQFSGMTVDQLKDQVRPE 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R+ + +VL I ++ NIEVT+ ++ + + + + K+ ++ ++
Sbjct: 352 ATTRIQSSLVLEQIAKEENIEVTDADIDAEVEKMAKAYGMEADKLKEYMGDAE--KESMK 409
Query: 414 APIFEDKVIDHILKSV 429
I K +D I+ +V
Sbjct: 410 KDIAITKAVDLIMDNV 425
>gi|114567172|ref|YP_754326.1| trigger factor [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122317849|sp|Q0AWE9|TIG_SYNWW RecName: Full=Trigger factor; Short=TF
gi|114338107|gb|ABI68955.1| trigger factor [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 438
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 80/442 (18%), Positives = 188/442 (42%), Gaps = 19/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E + +++ + + ++ + + + I GFR GK P ++ +GK
Sbjct: 1 MTAKLEKIENSEAYIEIEVSAEQVEEGLQYAYRKVIKQVAIPGFRKGKAPRELLELQFGK 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + ++ I+ E + L + + + +P IN+ E K
Sbjct: 61 EVLFQDALEYIVPEAYDKALEELNIKPIAQPEFDINDP---------ESGQPFKFNARVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++++ + ++V +V E+++ ++ ++ + E E + +GDK+ +D+
Sbjct: 112 VKPEVKLGEIEGIEVEIPDFQVKEEDVIQKFEDMRQQYAQVVEKIEEPAAMGDKLNIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D ++ +GS E LVGLK G+ K++ FPE + +DLAGK
Sbjct: 172 GFIDGEAFAGGKGEDYSLELGSNTFIPGFEEQLVGLKAGESKDVLVTFPESYHAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
S+K + + +N++ A F + +R + +++ +E ++ +K ++
Sbjct: 232 DAVFQVSVKRIETTEARELNDEFAQEVSQFNTIDELRQDIRKNLEEMAESRRKESIKTEL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY----HML 353
++ K VP++++ + +LQ M+ + + + +
Sbjct: 292 MEKALEKCDIPVPDAVINMQVERMLQDFEQRMAYQGLTLEQYFQFTNSNREDFSQKIWPE 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ V +L + E+ +EV+EEE+ + + F K+ + +A+ +R
Sbjct: 352 AEKSVKGDFMLEKLAEEKGMEVSEEELNEHIMKLANNFGMEVDKIKEELG---DAIENIR 408
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
+ DK ID ++ + +
Sbjct: 409 TGLKIDKAIDFLIDKAVVKEVA 430
>gi|268319668|ref|YP_003293324.1| trigger factor [Lactobacillus johnsonii FI9785]
gi|262398043|emb|CAX67057.1| trigger factor [Lactobacillus johnsonii FI9785]
Length = 449
Score = 194 bits (491), Expect = 3e-47, Method: Composition-based stats.
Identities = 80/438 (18%), Positives = 166/438 (37%), Gaps = 22/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + EL I + ++ + ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTSGELTFEISQEEVKKGLDQAFKRVKKNLRVPGFRKGHVSRIVFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P IT + ++ +
Sbjct: 61 EALYEDALNIVLPEAYTAAVKEAGIDPVGQPQITPVSM---------DKNKPWVMKATVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V K++D ++ + + N +K+ ++ GD VT+DYT
Sbjct: 112 VKPEVKLGDYKGIEVPKQNTRVLVKDVDAELNKRREQNAELVLKDGKAAQGDTVTIDYTG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + S +N +GS + L+G K GD ++ FPED+ KDLAGK+
Sbjct: 172 TIDGKPFDGGSAQNYSLELGSGTFIPGFEDQLIGHKAGDDVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFES---ESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I EV S ++++ A + + + K +
Sbjct: 232 AHFATKIHEVKSKELPKLDDEFAKDVDDSVESLDELKDKIKKDLKKHKEDDAKDAIQDAA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
I + N +VP+++++ + L + M Q + + +
Sbjct: 292 IKGAVENATIDEVPQAMIDEDVQNQLNQYLGNMQRQGIDPQTYFKLTGTTEAQLREQLAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K ++ T +E++ + + EK + L
Sbjct: 352 GAAERVKTNLVLEAIVAKEKLDATADEIKQEIKDLAHDYNMDEKVVRRSLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ I K ID + +
Sbjct: 407 KHDIAIRKAIDLVADKAK 424
>gi|42518936|ref|NP_964866.1| trigger factor [Lactobacillus johnsonii NCC 533]
gi|38606909|gb|AAR25448.1| trigger factor [Lactobacillus johnsonii]
gi|41583223|gb|AAS08832.1| trigger factor [Lactobacillus johnsonii NCC 533]
gi|329667520|gb|AEB93468.1| trigger factor [Lactobacillus johnsonii DPC 6026]
Length = 449
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 80/438 (18%), Positives = 166/438 (37%), Gaps = 22/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + EL I + ++ + ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTSGELTFEISQEEVKKGLDQAFKRVKKNLRVPGFRKGHVSRVVFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P IT + ++ +
Sbjct: 61 EALYEDALNIVLPEAYTAAVKEAGIDPVGQPQITPVSM---------DKNKPWVMKATVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V K++D ++ + + N +K+ ++ GD VT+DYT
Sbjct: 112 VKPEVKLGDYKGIEVPKQNTRVLVKDVDAELNKRREQNAELVLKDGKAAKGDTVTIDYTG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + S +N +GS + L+G K GD ++ FPED+ KDLAGK+
Sbjct: 172 TIDGKPFDGGSAQNYSLELGSGTFIPGFEDQLIGHKAGDDVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFES---ESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I EV S ++++ A + + + K +
Sbjct: 232 AHFATKIHEVKSKELPKLDDEFAKDVDDSVESLDELKDKIKKDLKKHKEDDAKDAIQDAA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
I + N +VP+++++ + L + M Q + + +
Sbjct: 292 IKGAVENATIDEVPQAMIDEDVQNQLNQYLGNMQRQGIDPQTYFKLTGTTEAQLREQLAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K ++ T +E++ + + EK + L
Sbjct: 352 GAAERVKTNLVLEAIVAKEKLDATADEIKQEIKDLAHDYNMDEKVVRRSLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ I K ID + +
Sbjct: 407 KHDIAIRKAIDLVADKAK 424
>gi|332978056|gb|EGK14794.1| trigger factor [Desmospora sp. 8437]
Length = 430
Score = 193 bits (490), Expect = 4e-47, Method: Composition-based stats.
Identities = 77/437 (17%), Positives = 189/437 (43%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ +E + L V + +L ++ N+ + + N+ GFR GKVP + +G
Sbjct: 1 MKASWDKNEKNRGVLTVEVDEQKLGEALNQAFKKVVKNVNLPGFRKGKVPRPIFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ++ ++ E + + +P I I + +E + +
Sbjct: 61 EALYQDAVEILVPEAYQSAVEETGIEPVDQPEIDIEQ---------LEKGKPFIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+ P++++ + L+V + V ++++ ++ + + + E E D+VT+D+
Sbjct: 112 VKPEVKLGDYKGLEVPEKDFSVTAEDVEAELKRMQERQGQLKPVEEGEVAEKDRVTLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + VGS E L+GLK G++K+++ FPED+ ++LAGK
Sbjct: 172 GFVDGEAFEGGKAEGYTLEVGSGQFIPGFEEQLIGLKPGEEKDVKVTFPEDYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + E+ ++++ A ++ ++ K+++ + +
Sbjct: 232 EAVFQVKLHEIKRLELPELDDEFAQDVSELDTLDELKKDIENKLREQKAEEEENYKRNSL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEE----DLQYYHML 353
++ S + D+P+ +VE+E + +LQ ++ + + +
Sbjct: 292 VEKASEQAEIDLPDVMVEHEVDHMLQHFEQQLRMQGINLDQYAQFTGQEKSELREQFKED 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+++V +VL I + N+EV++EE ++ + + + +++ + A++R
Sbjct: 352 AEKKVRANLVLEAIAAQENVEVSDEETEAEVKKLAEQMGRDIEEIRK-LLEAQGGFAQIR 410
Query: 414 APIFEDKVIDHILKSVQ 430
+ K ID ++ + +
Sbjct: 411 NEVKIRKTIDLLVSNSK 427
>gi|238923368|ref|YP_002936884.1| trigger factor [Eubacterium rectale ATCC 33656]
gi|259533607|sp|C4ZGF3|TIG_EUBR3 RecName: Full=Trigger factor; Short=TF
gi|238875043|gb|ACR74750.1| trigger factor [Eubacterium rectale ATCC 33656]
gi|291525456|emb|CBK91043.1| trigger factor [Eubacterium rectale DSM 17629]
Length = 443
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 78/436 (17%), Positives = 182/436 (41%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + + + L + + + + + ++ GFR GKVP + I+ +YG
Sbjct: 1 MSVQVENLEHNMAKLTIEVAAEELEKALDSAYQKQKKQISVPGFRKGKVPRAMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + ++++ + + RP++ + + IE
Sbjct: 61 GVFYEDAANILMQQTYAGAVDESGVDIVSRPTVEVTQ---------IEKGQPFIYTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++ + + + VT+ V ++E+D ++ N + GD +D+
Sbjct: 112 VRPEVTLGKYMGVTVTKIDTSVSDEEVDAELENQRNKNARTVTVTDRPVAEGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N +GS + LVG TGD+ E+ FPE + +DLAGK
Sbjct: 172 GFVDGVAFEGGKGENHPLEIGSHTFIDTFEDQLVGKNTGDEVEVNVTFPEKYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I E+ + ++++ A G ++ + + + + + E ++ + +
Sbjct: 232 PATFKVKINEIKAKELPELDDEFAQDAAGVDTLAEYKEEIKKNLTEKKETEAKKTKEDEA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ I +K D+PE+++E + ++++ ++ + + ++
Sbjct: 292 IQKIIDKSKMDLPEAMIETQCETMVEEFAQRIAQSGLTMEQYLQFSGMTVDQLKDQVRPE 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R+ + +VL I ++ NIEVT+ ++ + + + + K+ ++ ++
Sbjct: 352 ATTRIQSSLVLEQIAKEENIEVTDADIDAEVEKMAKAYGMEADKLKEYMGDAE--KESMK 409
Query: 414 APIFEDKVIDHILKSV 429
I K +D I+ +V
Sbjct: 410 KDIAITKAVDLIMDNV 425
>gi|308174521|ref|YP_003921226.1| prolyl isomerase [Bacillus amyloliquefaciens DSM 7]
gi|307607385|emb|CBI43756.1| prolyl isomerase (trigger factor) [Bacillus amyloliquefaciens DSM
7]
Length = 424
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 82/436 (18%), Positives = 186/436 (42%), Gaps = 21/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + + ++ + + + +I GFR GKVP + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVEVDAETFKTALDDAFKKVVKQVSIPGFRKGKVPRGLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ P+ + + RP I + + IE L
Sbjct: 61 EALYQDALDILLPVEYPKAVEEAGIEPVDRPEIDVEK---------IEKGESLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L + +D V ++++ ++ + + +E E GD V +D+
Sbjct: 112 VKPEVKLGDYKGLGIEKDDVSVTDEDVQNELKALQERQAELVVKEEGAVENGDTVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS E L GL+ G +K++E FPE++ ++LAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEVGSGSFIPGFEEQLTGLEAGAEKDLEVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + +N++ A E+ + + +++++ E K++ +
Sbjct: 232 PAVFKVKIHEIKAKELPELNDEFAKDIDEEVETLAELTEKTKKRLEEAKENEADAKLREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ S DVP+++++ E + +L++ + + + +
Sbjct: 292 LVLKASENAEADVPQAMIDTELDRMLKEFEQRLQMQGMNLELYTQFSGQDENALKEQMTE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A +RV + + L I + N+EVT+EE+++ L + + + + +
Sbjct: 352 DAAKRVKSNLTLEAIAQAENLEVTDEEVEAELTKMAEAYNMPVENIKQAIGST----DAM 407
Query: 413 RAPIFEDKVIDHILKS 428
+ + K ID ++++
Sbjct: 408 KEDLKVRKAIDFLVEN 423
>gi|320010819|gb|ADW05669.1| trigger factor [Streptomyces flavogriseus ATCC 33331]
Length = 466
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 84/477 (17%), Positives = 191/477 (40%), Gaps = 21/477 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L + +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLSIEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPNRVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEGELNVLGQPEVDITE---------LKDGELLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IEI + ++VT D EV E+++D+ + ++ + + E + GD VT+D
Sbjct: 112 VRPEIEIPDYSGIEVTVDALEVTEEDVDKAVEQLRERFASTNPVERAAAEGDVVTIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED V + +GS +L E + GL+ G E F + GK+
Sbjct: 172 KVDGEVLEDGVAAGVSYTIGSGELLDGIDEAVTGLEAG----GEATFTSELKGGSAEGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +++D A + F++ + +R ++++ ++ + + ++L
Sbjct: 228 AEVTVKVTAVSARELPELDDDFAQMASEFDTLAELREDSRKRLENTKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
+ + +PE L+ +E + + + EE
Sbjct: 288 EELLKLAEVPIPEKLLADEVQTRKHNLEHHQLGQMGLDLEKYLEIQGKTLEEFENETSEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T +L + K + V +EE+ L ++ + + + L
Sbjct: 348 AIKGIKTQFILDELVNKEKLNVNQEELTEHLMRRAASSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ K + ++++ ++ D +L D + ++++ E+
Sbjct: 407 GEVARGKALAVVVEAAKVTDTNGEIVELEDEEEAADEAAETVEAAEGTEKAEEKDEK 463
>gi|221142574|ref|ZP_03567067.1| trigger factor [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|302751502|gb|ADL65679.1| trigger factor (prolyl isomerase) [Staphylococcus aureus subsp.
aureus str. JKD6008]
Length = 436
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 80/444 (18%), Positives = 187/444 (42%), Gaps = 24/444 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +P+ ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLTVTVPAEKVNKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ID ++ + E + + D + +P +++ + IE D +
Sbjct: 61 EALYQDAIDILLPDAYGEAIDETDIKPVAQPEVSVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ + E+ + + ++ E GD V +D++
Sbjct: 112 VEPEVKLGDYKGLEIEKQETELSDDELQEAIDHSLGHLAEMVVKEDGVVENGDTVNIDFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + +GS E L G+K ++K++ FPE++ ++LAGK
Sbjct: 172 GSVDGEEFEGGQAEGYDLEIGSGSFIPGFEEQLEGMKVDEEKDVVVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQH---SEFLVRQKV 293
+ + E+ + +++A L E + + +++ +
Sbjct: 232 EATFKTKVNEIKFKEVPELTDEIANELDAEANTVDEYKENLRKRLAEQKATDAENAENVE 291
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQY 349
K + + ++ T D+PE++V E + ++ + + Q + + +
Sbjct: 292 KEEAITKATDNTTIDIPEAMVNTELDRMVSEFAQRIQQQGLDLQTYFQISGQDETQLREQ 351
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A++RV T + L I E IE T+E++ L + +F + + +
Sbjct: 352 MKDDAEQRVKTNLTLTAIAEAEKIEATDEDIDKELEKMSKQFNISVEDIKNTL----GNT 407
Query: 410 AELRAPIFEDKVIDHILKSVQIVD 433
++ + KVID + + + V+
Sbjct: 408 DIIKNDVRIQKVIDLLRDNAKFVE 431
>gi|288871379|ref|ZP_06117355.2| trigger factor [Clostridium hathewayi DSM 13479]
gi|288863727|gb|EFC96025.1| trigger factor [Clostridium hathewayi DSM 13479]
Length = 441
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 81/439 (18%), Positives = 190/439 (43%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E ++ V +P+ + + +S+ NI GFR GK P + ++ +YG
Sbjct: 14 MSLQVEKLEKNMAKITVEVPAEQFEKALTAAFNKNKSRFNIPGFRKGKAPQAMVEKMYGV 73
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I+E + + +++ RP I + + +E +L +
Sbjct: 74 EVLYEDAINEALDATYGDAVTESGLEVVSRPEIDVVQ---------VEKGKELIYTATVA 124
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++ + + ++V + EV +++I+ ++ ++ + N V++ E GD+ +D+
Sbjct: 125 VKPEVTLGEYKGIEVEKASAEVTDEDIEAELKKVQEQNSRLITVEDRAVEDGDQTVIDFE 184
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E ++ +GS E L+G G++ E+ FPE++ K+LAGK
Sbjct: 185 GSVDGTPFEGGKGEDYPLTIGSHSFIDTFEEQLIGKNIGEECEVHVTFPEEYHAKELAGK 244
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KE+ +N++ A FE+ + K+ + + + +
Sbjct: 245 PAVFKVTVKEIKRKELPELNDEFAGEVSEFETLEEYKNDVKSKLSLKKQKDAATENENHV 304
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+D + D+PE +++++ N ++ M S + E +
Sbjct: 305 VDKVVENAQMDIPEPMIDSQVNNMVNDYARRMQSQGLSLEQYMQFTGMTIETLKEQMKPQ 364
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I + NI V++E ++ + + ++ ++ + + +++
Sbjct: 365 AVKRIQTRLVLEAIVKAENITVSDEAVEKEIADMAESYKMEVAQIKEYMGENG--IEQMK 422
Query: 414 APIFEDKVIDHILKSVQIV 432
+ + +D ++ ++V
Sbjct: 423 EDLAVQEAVDFLVAEAKLV 441
>gi|261405358|ref|YP_003241599.1| trigger factor [Paenibacillus sp. Y412MC10]
gi|261281821|gb|ACX63792.1| trigger factor [Paenibacillus sp. Y412MC10]
Length = 440
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 86/450 (19%), Positives = 194/450 (43%), Gaps = 21/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + E LDV + + R+ + ++ + KAN+ GFR GKVP ++ +G
Sbjct: 1 MKATWEKIEKNLGVLDVEVDAERVASALDKAFNKVAKKANVPGFRKGKVPRPIFEARFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ID ++ E+ E + + D RP + I + K +
Sbjct: 61 ESLYQDAIDILLPEVYSEAVEQADIFPVDRPEVDIEQ---------FAKGETFKFKARVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + ++V EV ++E++ ++ + + + + E S+ GD V +D+
Sbjct: 112 VKPEVKLGEYKGVEVAAVAAEVSDEELNEELERLQQRHAELTVIDEGASQSGDIVVIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + +GS + ++G+ TGD K++E FPE + ++LA K
Sbjct: 172 GSVDGVPFEGGQAERYSLELGSNTFIPGFEDQVIGMATGDFKDVEVTFPETYHAEELANK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + E+ ++++ A F++ +G +++ E + + +
Sbjct: 232 QAVFKVKVHEIKRKQLPELDDEFAKDVSEFDTLDEYKGDLKKQLLTRKEQEAQGVRENEA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEE----DLQYYHML 353
++ + ++PE+++++E +++ + + S +
Sbjct: 292 VEKAAANAEVEIPEAMIQSEVQNMMRDFDNRLRQQGMNLEMFLSFSGQTNADLEGQMKDD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV +VL I ++ +EV+EEE+ L + ++ +L LR
Sbjct: 352 AEKRVRNNLVLEQIAKEEKLEVSEEEINKELENMADTYKRSADEIRSILGAN-GSLDSLR 410
Query: 414 APIFEDKVIDHILKS----VQIVDRKVTFD 439
+ K ID +L++ + ++ T +
Sbjct: 411 EELLLRKTIDFLLENSVEGAPVEKKEATEE 440
>gi|291298891|ref|YP_003510169.1| trigger factor [Stackebrandtia nassauensis DSM 44728]
gi|290568111|gb|ADD41076.1| trigger factor [Stackebrandtia nassauensis DSM 44728]
Length = 458
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 86/441 (19%), Positives = 171/441 (38%), Gaps = 20/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L + + + + + GFRPGK P + I GK
Sbjct: 1 MKSTVETLSPTRVRLSVEVPFEELATHVTQAYKKVGQQVKVPGFRPGKAPRAVIDQRVGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+I ++ DE + + + + + R RPS+T E I D
Sbjct: 61 DAIYAQATDEALPSQLYAAIRENEVRILGRPSVTEMEP--------IVEGKPFTFTAEVD 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ L+VT D EV +++ID ++ + + + + GD VT+D
Sbjct: 113 VAPEFELPDLASLEVTVDSTEVTDEQIDAEIENLRLRFGTLKSVDRPAATGDFVTMDLRA 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D +E S + VG+ DL + LVG+K D K + D AG+
Sbjct: 173 TIDGEEVEGGSTTGMSHEVGAGDLLDGLDDTLVGMKADDTKTFTTAL----AGGDRAGED 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V +++D A ++ +R + + + +E ++V+ +
Sbjct: 229 AEVEVKVGSVKERELPPLDDDFAQLASEHDTMDELRASTRETLAKRAEANQGRQVRENTI 288
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLA 354
D + VP+S +E E + + +R ++S N EE A
Sbjct: 289 DALVEAIELPVPDSAIEEEVSHRVDHLRNQLSEMNLDLDTYLSSQGQTLEEYTDDQKETA 348
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF--QKYPNALAEL 412
+ +VL E ++V+ E++ + + + ++ + L L
Sbjct: 349 TVGLRRQLVLDKAAEAKEVQVSAEQLTEEIRARAFQQGVPAEQHQAFANELQKRGLLPGL 408
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + +D I++ V + D
Sbjct: 409 TSELRRALALDEIVREVTVKD 429
>gi|333027106|ref|ZP_08455170.1| putative trigger factor [Streptomyces sp. Tu6071]
gi|332746958|gb|EGJ77399.1| putative trigger factor [Streptomyces sp. Tu6071]
Length = 477
Score = 193 bits (489), Expect = 5e-47, Method: Composition-based stats.
Identities = 84/447 (18%), Positives = 182/447 (40%), Gaps = 21/447 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+ + + L V +P L S + + I + +KGFR GK+P I +G+
Sbjct: 17 KSAVETLNPTRVRLTVEVPFEELKSSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGRG 76
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L E +++ + + E +++ + +P + I E ++ L DI
Sbjct: 77 AVLEEAVNDALPKFYTEAVNEGELNVLGQPEVDIKE---------LKDGELLSFTAEVDI 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++EI + ++V D EV E+++D+ + E+ + + E +E GD VT+D
Sbjct: 128 RPELEIPDYSGIEVEVDPIEVSEEDVDKAVEELRERFASTSAVERAAEDGDVVTIDLEAK 187
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V+ +LED V + +GS +L E + GL+ G E F + AGK+
Sbjct: 188 VEGEVLEDGIASEVSYTIGSGELLDGIDEAVKGLEAG----GEATFTSELKGGSAAGKEA 243
Query: 241 RLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + +V + +N+D A + F++ +R ++++ ++ + + ++LD
Sbjct: 244 EVAVKVSKVEARELPELNDDFAQMASEFDTLEELRADSRKRLENMKQYDQATQAQERVLD 303
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHMLA 354
+ +PE L+ +E + ++ + EE A
Sbjct: 304 KLLELVEVPIPEKLLADEIETRSHNLEHHQLPQMGLDLDKYLEIQGKTAEEFKTETEEQA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + T VL + + + V++EE+ L ++ + + + L
Sbjct: 364 VKGIKTQFVLDELVSREKLNVSQEELTEHLLRRAASSGMSPDQFAQAVVE-GGQVPMLVG 422
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ K + ++++ + D L
Sbjct: 423 EVARGKALATVVEAATVKDTNGEVVDL 449
>gi|260434378|ref|ZP_05788348.1| trigger factor [Synechococcus sp. WH 8109]
gi|260412252|gb|EEX05548.1| trigger factor [Synechococcus sp. WH 8109]
Length = 478
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 72/473 (15%), Positives = 193/473 (40%), Gaps = 18/473 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V + + + V +P R S+ + I + N+ GFR GKVP + + G
Sbjct: 16 KVTTEARPSSRLAVTVTVPGERCKTSYEDAITSLSRSINLPGFRKGKVPRTVLVQQLGGV 75
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++++I + + + +P + D E +L L D+
Sbjct: 76 RIKATALEKLIDNAWRDAIKQESLEPISQPDL---SSGFDGLLESFEPGEELTFTLEADV 132
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV---AFEVKETESEIGDKVTVDY 177
P ++ + L+ + D +D + + K E + ++ +
Sbjct: 133 APTPKLKTTKGLKAEFETVAYDASRVDAMLEDSRKQMATVVPVEGRTAKNGDIAVLGFKG 192
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T S D +E S ++ + + + E ++G+K G+ K ++ FP+D+ +D G
Sbjct: 193 TYSDDGSEIEGGSADSMDVDLENGRMIPGFIEGVIGMKVGETKTVDCQFPDDYQKEDARG 252
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K +K++ + ++++ A + E+ + +R Q++K +E +
Sbjct: 253 RKAAFEIEMKDLKTRELPELDDEFAKQASEQETLADLRKDLEQRLKDDAERRQTSNRRDA 312
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
++ + + ++PE+L++ E +L++ + + +++ + D +Q A
Sbjct: 313 LVAALVEQLEVELPEALIQQESRNLLEQTAAQFAQQGMDVKSLFTPDLVRNLMQNSRPEA 372
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE-LR 413
+ R+ L + E +I++ ++++ + + + +K++ + P L + +
Sbjct: 373 EERLRRSFALTALAEAEDIKLDDKDVDAKIKEV-------KKELSADAKIDPERLRQAVM 425
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
+ +D+++ + + + ++ D ++ + K +SK + +
Sbjct: 426 DDLMQDRLMGWLEEHSTLTEKAPAADDSEPSAKKKPAAKKTAANSKSKADAKD 478
>gi|307265822|ref|ZP_07547373.1| trigger factor [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919217|gb|EFN49440.1| trigger factor [Thermoanaerobacter wiegelii Rt8.B1]
Length = 432
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 86/442 (19%), Positives = 190/442 (42%), Gaps = 18/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K E +++ IPS + + N + SK N+ GFR GK P + ++ YG+
Sbjct: 1 MGVSLKKLEKSIATIELTIPSEKFEEGLNFAFKKNASKFNVPGFRRGKAPRAIVERYYGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ + E E L D P I I + I DL L +
Sbjct: 61 GVLYEDAVEYVFDEAYKEALKTFDLEPVDYPDINILQ---------IGKGKDLILEATVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYT 178
++P++E+ + +++ + V + +++ ++ ++ + N E +E GD +D+
Sbjct: 112 VMPEVELGEYKGIEIEKIEYNVYDGDVEYELEKLRQQNARIIPVEGRAAESGDIAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E +N + +GS + ++G + ++ FPED+ +++L GK
Sbjct: 172 GFIDGKPFEGGKAENYELELGSNTFIPGFEDQIIGHNVNETFDVNITFPEDYRVEELRGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A FE+ ++ +K+++ + ++K +
Sbjct: 232 SAVFKVTLKALNKKELPELDDEFAKDVSEFETLEELKADIRKKLEEKNRLDAENEMKEKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
+ + D+P+ +VE + + L+ + + + + E +
Sbjct: 292 VMKVVENAKVDIPDVMVERQIDISLRDLDYNLRYQGLDLNSYLSITGKTLENLRKEMWDG 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A RV T +V+ I + NI+VTEEE+++ L + + + ++ + + ++
Sbjct: 352 ALNRVKTQLVIDKIAKVENIQVTEEELENRLKEMAESYRINLEEFKKSL--TESQINGIK 409
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I K ID I +I+ ++
Sbjct: 410 EDIAYYKTIDFIFSECKIISKE 431
>gi|328554440|gb|AEB24932.1| trigger factor [Bacillus amyloliquefaciens TA208]
gi|328912844|gb|AEB64440.1| prolyl isomerase (trigger factor) [Bacillus amyloliquefaciens LL3]
Length = 424
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 82/436 (18%), Positives = 186/436 (42%), Gaps = 21/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + + ++ + + + +I GFR GKVP + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVEVDAETFKTALDDAFKKVVKQVSIPGFRKGKVPRGLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ P+ + + RP I + + IE L
Sbjct: 61 EALYQDALDILLPVEYPKAVEEAGIEPVDRPEIDVEK---------IEKGESLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L + +D V ++++ ++ + + +E E GD V +D+
Sbjct: 112 VKPEVKLGDYKGLGIEKDDVSVTDEDVQNELKALQERQAELVVKEEGAVENGDTVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS E L GL+ G +K++E FPE++ ++LAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEVGSGSFIPGFEEQLTGLEAGAEKDVEVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + +N++ A E+ + + +++++ E K++ +
Sbjct: 232 PAVFKVKIHEIKAKELPELNDEFAKDIDEEVETLAELTEKTKKRLEEAKENEADAKLREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ S DVP+++++ E + +L++ + + + +
Sbjct: 292 LVLKASENAEADVPQAMIDTELDRMLKEFEQRLQMQGMNLELYTQFSGQDENALKEQMTE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A +RV + + L I + N+EVT+EE+++ L + + + + +
Sbjct: 352 DAAKRVKSNLTLEAIAQAENLEVTDEEVEAELTKMAEAYNMPVENIKQAIGST----DAM 407
Query: 413 RAPIFEDKVIDHILKS 428
+ + K ID ++++
Sbjct: 408 KEDLKVRKAIDFLVEN 423
>gi|161507348|ref|YP_001577302.1| trigger factor [Lactobacillus helveticus DPC 4571]
gi|172048266|sp|A8YUS3|TIG_LACH4 RecName: Full=Trigger factor; Short=TF
gi|160348337|gb|ABX27011.1| Trigger factor [Lactobacillus helveticus DPC 4571]
Length = 452
Score = 193 bits (489), Expect = 6e-47, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 179/438 (40%), Gaps = 22/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K + EL I + + ++ ++ ++ GFR G V YG+
Sbjct: 1 MSVKWKKTGKTTGELTFDISKDEIKLGLDQAFRRVKKNLHVPGFRKGHVSRVIFDQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + A +P I + D D ++ +
Sbjct: 61 EALYEDALNIVLPNAYSAAVKEAGIAAVGQPQIVPVSMDKD---------KDWTMKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V +K++D ++ + + N +K+ +S GD VT+DY
Sbjct: 112 VEPEVKLGDYKGIEVPKQNTRVYQKDVDAELDKRREQNAELVLKKGKSAKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D E S +N +GS + L+G + GD ++ FP+D+ KDLAGK+
Sbjct: 172 TIDGKEFEGGSAENYSLELGSGAFIPGFEDQLIGHEAGDDVDVVVTFPKDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ++ ++ +++K E ++
Sbjct: 232 AHFATKIHEVKSKQLPKLDDEFAKDVDDSVDTLDELKDKIKKQLKDQKEQAANDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++ T ++P+++++++ + L + M Q +++ +
Sbjct: 292 IEGAVKNATVDEIPDAMIQDDVDTQLNQYLGNMQRQGIDPQTYYKLTNTNEQQLRSQFAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I EK ++ T+EE+ + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVEKEGLKATKEEIDKEIKDLAAEYNMDEKTIRNTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQ 430
I K +D + + +
Sbjct: 407 SHDITVRKAMDLVTDNAK 424
>gi|119717702|ref|YP_924667.1| trigger factor [Nocardioides sp. JS614]
gi|166229911|sp|A1SME5|TIG_NOCSJ RecName: Full=Trigger factor; Short=TF
gi|119538363|gb|ABL82980.1| trigger factor [Nocardioides sp. JS614]
Length = 471
Score = 193 bits (489), Expect = 7e-47, Method: Composition-based stats.
Identities = 84/476 (17%), Positives = 195/476 (40%), Gaps = 20/476 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P L S + + I + N+ GFR GKVP + I G+
Sbjct: 1 MKSAVETLSPTRAKLTVEVPFEELKPSLDAAYKQIAKQINVPGFRRGKVPPAIIDRQVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + I++++ + E L + +P I + + E L+ D
Sbjct: 61 GAVLDQAINDVVPQKYVEALQANSLQPLAQPEIEVTK---------FEDNQALEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+I + +D ++ D E+ + +++ Q+ + + E + GD V +D
Sbjct: 112 IRPEIALPDYDGVEAQVDDIELSDADVEEQVEALRERFATLIDVERPAAEGDFVVMDLVA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D +E + + VG + E LVG+ GD+K F + D+ G+
Sbjct: 172 TRDGEPIEGAEVSGMSYRVGRGGMLDGLDEALVGMSAGDEK----TFQSELVGGDMVGEA 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V + ++ +V ++++ A + F++ + +++ + + +L
Sbjct: 228 VDVAVTVSQVQEQELPELDDEFAQMASEFDTVEELTADVRERLGRGRRLEQAAAARDAVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++ +PE +V +E N Q V +++ A + + + ++ + +RRV
Sbjct: 288 EQLLDRVEVPLPEVVVTDELNARRQNVEQQLAYAGITMEKYLEDEGQTMEEFEADLERRV 347
Query: 359 L----TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+L + +K + + E+ L ++ + ++ +H ++ N + EL
Sbjct: 348 RDAVAAQFLLDEVAKKEEFGIDQAELSEHLVRRAQQSGQDPQEFANHMFEH-NHIPELVQ 406
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
I K + I+++ + D +L + + + + D+ + E A
Sbjct: 407 EILRGKALARIVEAAVVKDGSGNVVELKNLRPDGTIGEPEDEIEAETEIEIEPAAE 462
>gi|58337153|ref|YP_193738.1| trigger factor [Lactobacillus acidophilus NCFM]
gi|227903729|ref|ZP_04021534.1| trigger factor [Lactobacillus acidophilus ATCC 4796]
gi|67461605|sp|Q5FKR7|TIG_LACAC RecName: Full=Trigger factor; Short=TF
gi|58254470|gb|AAV42707.1| trigger factor cell division [Lactobacillus acidophilus NCFM]
gi|227868616|gb|EEJ76037.1| trigger factor [Lactobacillus acidophilus ATCC 4796]
Length = 442
Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats.
Identities = 85/460 (18%), Positives = 185/460 (40%), Gaps = 26/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + EL I + + ++ + I+ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTTGELTFDISKDEIKLGLDQAFKRIKKNLRVPGFRKGHVSRVIFDQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + A +P I + D D ++ +
Sbjct: 61 EALYEDALNIVLPNAYAAAVKEAGINAVGQPQIVPVSMDKD---------KDWTMKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + ++V + V +K+ID ++ + + + +K+ ++E GD VT+DY
Sbjct: 112 VQPEVELGEYKGIEVPKQNTRVYQKDIDAELDKRREQSAELVLKKGKAENGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + S +N +GS + LVG + GD ++ FP+D+ KDLAGK+
Sbjct: 172 TIDGKEFDGGSAENYSLELGSGTFIPGFEDQLVGHEAGDDVDVVVTFPKDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ++ ++ + +K E + ++
Sbjct: 232 AHFATKIHEVKSKQLPELDDEFAKDVDDSVDTLDELKEKIKKDLKDQKEQVANDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++ T ++P+++++ + + L + M Q +++ +
Sbjct: 292 IEGAVKNATIDEIPDAMIQEDVDTQLNQYLGNMQRQGIDPQTYYKLTNTTEDQLRSQFAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I +++ T+EE+ + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVAAEDLKATKEEIDKEIKDLAAEYNMDEKVVRNTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
I K +D I + ++V +L S+ K
Sbjct: 407 GHDITVRKAMDLITDNA----KQVAKSKLEAKDSDDKESK 442
>gi|113954868|ref|YP_729304.1| trigger factor [Synechococcus sp. CC9311]
gi|123031946|sp|Q0IE18|TIG_SYNS3 RecName: Full=Trigger factor; Short=TF
gi|113882219|gb|ABI47177.1| trigger factor [Synechococcus sp. CC9311]
Length = 449
Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats.
Identities = 76/446 (17%), Positives = 182/446 (40%), Gaps = 18/446 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V G + ++V IP+ R S+ I + N+ GFR GKVP S + G
Sbjct: 7 KVTSTARPGSRLAVEVAIPAERSQASYEAAISQLSRSVNLPGFRKGKVPRSVLVQQLGGL 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++ ++ I + + + A +P + G + E L + D+
Sbjct: 67 RIRATALENLVDAIWRDTIKQETIEALGQPEVD---GGYEALLESFEPGKPLSITFEADV 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV---AFEVKETESEIGDKVTVDY 177
P + + L+ + D ++D + + + E ++ V
Sbjct: 124 APTPTLKTTKGLKAEAESVSFDAAKVDEMLEQSRRQLATVVPVEGRKAAQGDIAVVGFKG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T S D +E S +++ + + E +VG+ GD K + FPED+ +D G
Sbjct: 184 TYSDDGSEIEGGSSESMDVDLEHGRMIPGFIEGVVGMTVGDSKTVACNFPEDYPKEDARG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K +K++ + +++D A + E+ + +R +++K +E +
Sbjct: 244 RKASFEIELKDLKTRELPDLDDDFAKQASEQETLAELRTDLEKRLKDDAERRTTSNRRDA 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
+L + + ++PE+LV+ E ++++ + S +++ + D ++ A
Sbjct: 304 LLAALVEQLEVELPETLVQQEVRNLVEQTAAQFSQQGMDVKSLFTPDLVRNLMETSRPEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE-LR 413
+ R+ + L + E ++++ + E+ + + + + G PN L + +
Sbjct: 364 EERLRRSLALSALAEAESLKIEDPEIDAKVKEVTAQLSGERDI-------DPNRLRQAVI 416
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFD 439
+ ++K++ + ++ + ++ D
Sbjct: 417 EDLLQEKLLGWLEENSTVTEKAPDKD 442
>gi|260684850|ref|YP_003216135.1| trigger factor [Clostridium difficile CD196]
gi|260688508|ref|YP_003219642.1| trigger factor [Clostridium difficile R20291]
gi|260211013|emb|CBA66326.1| trigger factor [Clostridium difficile CD196]
gi|260214525|emb|CBE07041.1| trigger factor [Clostridium difficile R20291]
Length = 447
Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats.
Identities = 96/438 (21%), Positives = 202/438 (46%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ EG K L + + +N+ + N+ R+K NI GFR GK P I++ YGK
Sbjct: 20 MKAELIKKEGNKVTLKITVDNNKFEAAVNKAYNKSRNKYNIPGFRKGKAPRIVIETQYGK 79
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I ++ I+ + E+ PE + + D P + I E D L + L+ +
Sbjct: 80 GIFYNDAIEILFPEVYPEAIKELDIDPIDNPDLDIEEISKD---------NGLVMVLNVE 130
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYT 178
+ P+ E+ ++ +++ + V ++ +D ++ E+ + N E ++ E GD +D+
Sbjct: 131 VKPEFELGNYKGIEIAKVENTVSDENVDAKLQEMVEKNARLVSVEDKALEDGDTAIIDFE 190
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ V + +N ++GS E LVG K G++ E+ FPE++ +DLAGK
Sbjct: 191 GFENGVAFDGGKGENYNLVIGSNTFIPGFEEQLVGKKAGEEVEVNVTFPEEYHSQDLAGK 250
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V N I +V ++++ A F+S ++ K+++ ++ + + +
Sbjct: 251 PVVFNVKINDVKVKELSALDDEFAKDTSEFDSLDELKADVRAKLEEEAKNRADAETRNSV 310
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
++ ++ ++PE +++++ + +L ++ +++ Q + + EE +
Sbjct: 311 VEKVAENTEIEIPEVMIQHQIDNMLNELNYQLQYQGFGLQQLLEMTGRTMEELREERKED 370
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
AK+ V + +VL I + IE TEEE ++ L + + +K+ + +++
Sbjct: 371 AKKLVKSSLVLEAITKAEGIEATEEEFKAELEKMASAYNMEVEKIEASLRDAD--KEDIK 428
Query: 414 APIFEDKVIDHILKSVQI 431
I K ID ++ + I
Sbjct: 429 GQIKIRKTIDLLVDNATI 446
>gi|256842923|ref|ZP_05548411.1| trigger factor tig [Lactobacillus crispatus 125-2-CHN]
gi|256614343|gb|EEU19544.1| trigger factor tig [Lactobacillus crispatus 125-2-CHN]
Length = 443
Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats.
Identities = 82/443 (18%), Positives = 182/443 (41%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + +L I + + ++ ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTTGDLTFDISQDEIKLGLDQAFRRVKKNLRVPGFRKGHVSRVIFDQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +A +P I + D D ++ +
Sbjct: 61 EALYEDALNIVLPNAYSAAVKEAGIKAVGQPQIVPVSMDKD---------KDWTMKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V +K+ID ++ + + N +K+ ++E GD VT+DY
Sbjct: 112 VEPEVKLGDYKGIEVPKQNTRVYQKDIDAELDKRREQNAELVLKKGKAEKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D+ E S +N +GS + L G + GD ++ FPED+ KDLAGK+
Sbjct: 172 TIDDKPFEGGSAENYSLELGSGAFIPGFEDQLEGHEAGDDVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ++ ++ + +K+ E ++
Sbjct: 232 AHFATKIHEVKSKQLPKLDDEFAKDVDDSVDTLDDLKEKIKKDLKEQKEQQANDAIQEAA 291
Query: 298 LD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++ +SN ++P+++++ + + L + M Q +++ +
Sbjct: 292 IEGAVSNATIDEIPDAMIQEDVDTQLNQYLGNMQRQGIDPQTYYKLTNTNEQQLRSQFEK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I +++ T+EE+ + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVAAEDLKATKEEIDKEIKDLASEYNMDEKMVRNTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
I K +D I + + V +
Sbjct: 407 GHDITVRKAMDLITDNAKQVAKS 429
>gi|218290813|ref|ZP_03494882.1| trigger factor [Alicyclobacillus acidocaldarius LAA1]
gi|218239171|gb|EED06372.1| trigger factor [Alicyclobacillus acidocaldarius LAA1]
Length = 435
Score = 192 bits (488), Expect = 8e-47, Method: Composition-based stats.
Identities = 83/439 (18%), Positives = 196/439 (44%), Gaps = 16/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + + L+V + S R + +E + + + + GFR GKVP + +G
Sbjct: 1 MAAKSENTGANVGVLEVEVDSERFAQALDEAFKRVVKRVVVPGFRKGKVPRKLFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ++ ++ + E + + +P++ + + +E + +
Sbjct: 61 ESLYEDAVNILLPQAYQEAVMETGIEPVDQPAVDVVQ---------VESGKPFIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+ P++++ + ++V + EV ++++++++ + +++ E E E GD VT+D+
Sbjct: 112 VKPEVQLGEYKGVEVEDKVFEVTDQDVEQEIENVLRSHAQIETVEDGAVEKGDVVTIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD E + + +GS L + + L+G+K G+++EIE FPE++ +K L GK
Sbjct: 172 GTVDGEPFEGGEAEGFRLEIGSGALVAGFEDQLIGMKPGEEREIEVTFPENYHVKSLRGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
R + E+ P+ +N++ F++ +K+++ ++ + ++ ++
Sbjct: 232 VARFRVKLHEIRRPVLRELNDEFVQEISEFQTVDEYMADLRKKLEERAKLEHERYIENEV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
+ + T ++P ++E E + + ++ EE Y L
Sbjct: 292 VRKAVERATIEIPPIMIEREIDHQIGHFAQQLQMQQIPLDAYLEFTGLTMEELRDQYREL 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ V T +VL I +EVTEE+++ + + + ++ LA LR
Sbjct: 352 AEQNVRTSLVLEAIANAEQVEVTEEDVEQEIARMAEQTGLEADRVRQLLSFRDPELASLR 411
Query: 414 APIFEDKVIDHILKSVQIV 432
A + K + ++ +IV
Sbjct: 412 ADLKTRKTVRLLVDHAKIV 430
>gi|329923472|ref|ZP_08278953.1| trigger factor [Paenibacillus sp. HGF5]
gi|328941272|gb|EGG37567.1| trigger factor [Paenibacillus sp. HGF5]
Length = 440
Score = 192 bits (488), Expect = 9e-47, Method: Composition-based stats.
Identities = 86/450 (19%), Positives = 192/450 (42%), Gaps = 21/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + E LDV + + R+ + ++ + KAN+ GFR GKVP ++ +G
Sbjct: 1 MKATWEKIEKNLGVLDVEVDAERVASALDKAFNKVAKKANVPGFRKGKVPRPIFEARFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ID ++ E+ E + + D RP + I + K +
Sbjct: 61 ESLYQDAIDILLPEVYGEAVEQADIFPVDRPEVDIEQ---------FAKGETFKFKARVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++ + + ++V EV E+E++ ++ + + + + E S+ GD V +D+
Sbjct: 112 VKPEVTLGEYKGVEVAAVAAEVSEEELNEELERLQQRHAELTVIDEGASQSGDIVVIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + +GS + ++G+ TGD K++E FPE + ++LA K
Sbjct: 172 GSVDGVPFEGGQAERYSLELGSNTFIPGFEDQVIGMATGDFKDVEVTFPETYHAEELANK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + E+ ++++ A F++ + +++ E + + +
Sbjct: 232 QAVFKVKVHEIKRKQLPELDDEFAKDVSEFDTLDEYKEDLKKQLLTRKEQEAQGVRENEA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEE----DLQYYHML 353
++ + ++PE+++++E +++ + + S +
Sbjct: 292 VEKAAANAEVEIPEAMIQSEVQNMMRDFDNRLRQQGMNLEMFLSFSGQTNADLEGQMKDD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV +VL I ++ +EV+EEE+ L + ++ +L LR
Sbjct: 352 AEKRVRNNLVLEQIAKEEKLEVSEEEINKELENMADTYKRSADEIRSILGAN-GSLDSLR 410
Query: 414 APIFEDKVIDHILKS----VQIVDRKVTFD 439
+ K ID +L++ + ++ T +
Sbjct: 411 EELLLRKTIDFLLENSVEGAPVEKKEATEE 440
>gi|157693225|ref|YP_001487687.1| trigger factor [Bacillus pumilus SAFR-032]
gi|166987586|sp|A8FFW0|TIG_BACP2 RecName: Full=Trigger factor; Short=TF
gi|157681983|gb|ABV63127.1| peptidylprolyl isomerase [Bacillus pumilus SAFR-032]
Length = 424
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 83/436 (19%), Positives = 190/436 (43%), Gaps = 21/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + + ++ + + + +I GFR GKVP + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVEVDAETFNKALDDAFKKVVKQVSIPGFRKGKVPRGLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D ++ P+ + + RP I + + IE L
Sbjct: 61 ESLYQDALDILLPVEYPKAIDEAGIDPVDRPEIDVEK---------IEKGESLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L V +D V ++++ ++ + +E E GD V +D+
Sbjct: 112 VKPEVKLGDYKGLNVEKDDATVTDEDVQEELKGMQNRQAELVVKEEGAIENGDTVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS E LVGL+ G +K++E FPE++ +DLAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEVGSGSFIPGFEEQLVGLEAGAEKDVEVTFPEEYHAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + ++++ A E+ + + +++++ E K++ +
Sbjct: 232 PAVFKVKIHEIKAKELPALDDEFAKDVDEEVETLAELTEKTKKRLEEAKENEAEGKLREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
+++ S D+P+++V+ E + ++++ + Q ++ +
Sbjct: 292 LVEKASENAEVDIPQAMVDTELDRMMKEFEQRLQMQGMNLELYFQFSGQDEDALKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A +RV + + L I N++V++EE++ L + + +++ ++ + +
Sbjct: 352 DAAKRVKSNLTLEAIAAAENLQVSDEEVEEELSKMAEAYNMP----IENIKQAIGSTEAM 407
Query: 413 RAPIFEDKVIDHILKS 428
+ + K ID ++++
Sbjct: 408 KEDLKVRKAIDFLVEN 423
>gi|154686959|ref|YP_001422120.1| trigger factor [Bacillus amyloliquefaciens FZB42]
gi|166229014|sp|A7Z7B3|TIG_BACA2 RecName: Full=Trigger factor; Short=TF
gi|154352810|gb|ABS74889.1| Tig [Bacillus amyloliquefaciens FZB42]
Length = 424
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 82/436 (18%), Positives = 187/436 (42%), Gaps = 21/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + ++ + ++ + + + +I GFR GKVP + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVEVDADTFKTALDDAFKKVVKQVSIPGFRKGKVPRGLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ P+ + + RP I + + IE L
Sbjct: 61 EALYQDALDILLPVEYPKAVEEAGIEPVDRPEIDVEK---------IEKGESLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L + +D V ++++ ++ + + +E E GD V +D+
Sbjct: 112 VKPEVKLGDYKGLGIEKDDTAVTDEDVQNELKALQERQAELVVKEEGAVENGDTVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS E L GL+ G +K++E FPE++ ++LAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEVGSGSFIPGFEEQLTGLEAGAEKDVEVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + +N++ A E+ + + +++++ E K++ +
Sbjct: 232 PAVFKVKIHEIKAKELPELNDEFAKDIDEEVETLAELTEKTKKRLEEAKENEADAKLREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ S DVP+++++ E + +L++ + + + +
Sbjct: 292 LVLKASENAEADVPQAMIDTELDRMLKEFEQRLQMQGMNLELYTQFSGQDENALKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A +RV + + L I + N+EVT+EE+++ L + + + + +
Sbjct: 352 DAAKRVKSNLTLEAIAQAENLEVTDEEVEAELTKMAEAYNMPVENIKQAIGST----DAM 407
Query: 413 RAPIFEDKVIDHILKS 428
+ + K ID ++++
Sbjct: 408 KEDLKVRKAIDFLVEN 423
>gi|149181755|ref|ZP_01860246.1| trigger factor [Bacillus sp. SG-1]
gi|148850496|gb|EDL64655.1| trigger factor [Bacillus sp. SG-1]
Length = 427
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 86/437 (19%), Positives = 193/437 (44%), Gaps = 20/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L + + ++ + + + + + + N+ GFR GK+P + +G
Sbjct: 1 MSAKWEKQEGNQGVLTIEVDADTVNNGLDAAFKKVVKQVNVPGFRKGKMPRGMFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ E + + + + RP I I + E +L + +
Sbjct: 61 ESLYQDALDVILPEAYAKAVEETGIQPVDRPDIDIEQM---------EKGKELIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + L+V + EV ++++ ++ + + VKE +E GD V +D+
Sbjct: 112 VKPEVKLGEYKSLEVEKMDTEVTSEDVENELKSLQEKQAELAVKEGAAENGDTVVIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD E +N +GS E LVGL+ G +KE+E FPE++ +LAGK
Sbjct: 172 FVDGEAFEGGKAENYSLELGSGSFIPGFEEQLVGLEAGAEKEVEVSFPEEYHAAELAGKP 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV + ++++ A ES +R +++++ + Q ++ +
Sbjct: 232 AVFKTKLHEVKAKELPELDDEFAKDADEEVESLDQLREKIQKRLEESKKNEADQTLRDTL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHML 353
++ S D+P+++V+ E + ++Q+ + Q +E+
Sbjct: 292 VEKASENAEMDIPDAMVDTEVDRMMQEFEQRLQMQGMNLDLYFQFSGQKEEDLRGQMKED 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +RV T + L I + N+E+++EE + + + ++ + L L+
Sbjct: 352 AAKRVRTNLTLEAIADAENLEISDEEAEEEVNKLAEQYNMAADNIKQAL----GGLDNLK 407
Query: 414 APIFEDKVIDHILKSVQ 430
A + K ++ ++ + +
Sbjct: 408 ADLKIRKAVEVLVDNSK 424
>gi|323705910|ref|ZP_08117481.1| trigger factor [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534708|gb|EGB24488.1| trigger factor [Thermoanaerobacterium xylanolyticum LX-11]
Length = 432
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 86/442 (19%), Positives = 191/442 (43%), Gaps = 18/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E +++ IP + + N + + NI GFR GK P I+ YG+
Sbjct: 1 MSSNLKKIENSVATIELNIPKEKFEEGLNFSYKKNVGRFNIPGFRRGKAPRIIIERYYGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I+ + + E + P+I I + I DL +
Sbjct: 61 GVLYEDAIEHVFPDAYQEAIDTLKLEPIDNPTIDILQ---------IGKGQDLIIEAVVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+LP +E+ + ++V + V +++I+ ++ ++ ++N ++ +++GD V + +
Sbjct: 112 VLPDVELGQYKGIEVKKVEYNVKDEDINNRLEQMRQSNARVVPVEDRAAQMGDIVDISFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D V E N +GS E +VG ++ ++ FP+D+ ++L GK
Sbjct: 172 GFLDGVPFEGGKSDNYSLELGSKTFIPGFEEQIVGHNVNEEFDVNVKFPDDYRAEELKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V I + +N+D A F++ ++ +++++ + ++++K +
Sbjct: 232 DVVFKVKIFSIKHKELPELNDDFAKDVSEFDTLDELKEDIKRELQEQYDLSAKEEMKENV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+ + D+PE +V+ + + L+ + + + + + +E+ + H
Sbjct: 292 VKAVVENSKVDIPEIMVDRQIDISLRDLDYNLRYQGLDLDKYLEITGKTEEDLRKEMHDD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A RV T +V+ IG+ NI T+EE+ L + + + + + + ++
Sbjct: 352 AALRVKTQLVIDKIGKIENITATDEEVDKRLSEMATNYNVKLEDLKKEL--TESQINNIK 409
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I K ID I ++ +I+D++
Sbjct: 410 DDIVYFKTIDFIFENSKIIDKE 431
>gi|118594832|ref|ZP_01552179.1| trigger factor [Methylophilales bacterium HTCC2181]
gi|118440610|gb|EAV47237.1| trigger factor [Methylophilales bacterium HTCC2181]
Length = 436
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 93/441 (21%), Positives = 193/441 (43%), Gaps = 15/441 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + G++R + ++P + +R++ I A KG+RPGKVP+ ++ +G
Sbjct: 1 MAEVVEKISGIERRVKAMVPIASFQNEITQRLQQILKTARFKGYRPGKVPMKIVEQQHGG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + I+ EI+ + + R A P I L + D + ++++
Sbjct: 61 DVRGEIYSKAIESKFGEIVQENNLRVAGMPDI--------RHEPLDKVNADFEFTATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +++ ++TQ + ++ + + IAK + S++ DKV +
Sbjct: 113 FPEFKLTDLKKQKITQYETAISAADVKKTIDVIAKQRAVYNKVARASKMEDKVMALMQSA 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D + E + ++FI+G LVGLK G+ K +P+ H K+LAGK V
Sbjct: 173 IDGKVAESSGTEPLEFIMGDPSRVKGFDTALVGLKAGETKAFTVKYPKTHEPKELAGKDV 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++KEV P ++ D A LG M + ++Q S+ + +K+Q+
Sbjct: 233 EYVVTLKEVQEPTLPKIDEDFAKSLGVADGDLKKMNEEIKKSLEQESDRRTKANLKQQVF 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++FD+P++LV E N + Q + +++ + AK
Sbjct: 293 TALVEGHSFDLPKALVGGEVNRLAQSTYQNLQRQGMDPKDIKLEPSMFEE----NAKTAC 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+LG I + ++++ E++++ + + + + + F + L E ++ E
Sbjct: 349 KLRIILGKIVDTHSLQANAEQIKAKVEEFSSNY-DDSAQAIKWFYEDEKRLDEPKSLATE 407
Query: 419 DKVIDHILKSVQIVDRKVTFD 439
D V+D + + +K+ D
Sbjct: 408 DNVVDWFVGQCKKETKKIELD 428
>gi|116629802|ref|YP_814974.1| trigger factor [Lactobacillus gasseri ATCC 33323]
gi|311110557|ref|ZP_07711954.1| trigger factor [Lactobacillus gasseri MV-22]
gi|122273260|sp|Q042T6|TIG_LACGA RecName: Full=Trigger factor; Short=TF
gi|116095384|gb|ABJ60536.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Lactobacillus gasseri ATCC 33323]
gi|311065711|gb|EFQ46051.1| trigger factor [Lactobacillus gasseri MV-22]
Length = 449
Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats.
Identities = 85/463 (18%), Positives = 176/463 (38%), Gaps = 22/463 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + EL I + ++ + ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTSGELTFEISQEEVKKGLDQAFKRVKKNLRVPGFRKGHVSRVVFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P IT + +++ +
Sbjct: 61 EALYEDALNIVLPEAYAAAVKEAGIDPVGQPQITPVSM---------DKNKPWEMKATVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V K++D ++ + + N +K+ ++ GD VT+DYT
Sbjct: 112 VKPEVKLGDYKGIEVPKQSTRVLVKDVDAELNKRREQNAELVLKDGKAAKGDTVTIDYTG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + S +N +GS + L+G K GD ++ FPED+ KDLAGK+
Sbjct: 172 TIDGKPFDGGSAQNYSLELGSGTFIPGFEDQLIGHKAGDDVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFES---ESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I EV S ++++ A + + + K E
Sbjct: 232 AHFATKIHEVKSKELPKLDDEFAKDVDDSVESLDELKDKIKKDLKKHKEEDAKDAIQDAA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
I + N +VP+++++ + L + M Q + + +
Sbjct: 292 IKGAVENATIDEVPQAMIDEDVQNQLNQYLGNMQRQGIDPQTYFKLTGTTEAQLREQLAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K ++ + +E++ + + EK + L
Sbjct: 352 GAAERVKTNLVLEAIVAKEKLDASADEIKQEIKDLAHDYNMDEKVVRRSLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
+ I K ID + + V +K T S++ +K
Sbjct: 407 KHDIAIRKAIDLVADKAKQVAKKATKKSTAKKSTKEDEKKADK 449
>gi|260438110|ref|ZP_05791926.1| trigger factor [Butyrivibrio crossotus DSM 2876]
gi|292809591|gb|EFF68796.1| trigger factor [Butyrivibrio crossotus DSM 2876]
Length = 437
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 71/447 (15%), Positives = 177/447 (39%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +L + + ++ + E ++K ++ GFR GKVP + I+ +YG
Sbjct: 1 MSFTVENLEKNMAKLTITVSADDFEKALQESYMKNKNKISVPGFRKGKVPRAMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + I + ++ +P I I + IE D +
Sbjct: 61 GIFYEDAANYAIPSAYSDAAAECGLDIVSQPEIDITQ---------IEKGKDFIFTATVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++ + + +++ + +V ++ ++ ++ + N +V + D+ +D+
Sbjct: 112 VKPEVTLGKYLGVEIEKVDTKVTADDVKAELEKVREQNSRLLDVTTRGVKDKDQAIIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +GS E L+G K G + E+ FPE++ ++LAGK
Sbjct: 172 GFVDGEAFEGGKGTDYPLTIGSHSFIDTFEEQLIGAKIGKEVEVNVTFPENYQAENLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+K + + ++++ A F++ + + + + + + + + +R
Sbjct: 232 AATFKVVVKAIKAKELPKLDDEFAQEVSEFDTLADYKADIKKNLTEKKKEAAKSERERLA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
+ T ++P+++V+ + N +++ + S + E+ ++
Sbjct: 292 VAAAVENATMEIPDAMVKTQVNRMIEDFAQRLQSQGLSMEQYMQYVGGSPEQFMETMKPE 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R+ +VL + E IEVTE ++ + + + + +K+ + +++
Sbjct: 352 ATTRIKNSLVLEAVAEAEKIEVTEADIDAEIEKMASMYNMEVEKVKEFIGDTE--KDQIK 409
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQ 440
+ K + + K D+
Sbjct: 410 KDLAVQKAAELLGSKAVEKAPKKAEDE 436
>gi|52081306|ref|YP_080097.1| trigger factor [Bacillus licheniformis ATCC 14580]
gi|52786685|ref|YP_092514.1| trigger factor [Bacillus licheniformis ATCC 14580]
gi|67461711|sp|Q65GJ3|TIG_BACLD RecName: Full=Trigger factor; Short=TF
gi|52004517|gb|AAU24459.1| trigger factor (prolyl isomerase) [Bacillus licheniformis ATCC
14580]
gi|52349187|gb|AAU41821.1| Tig [Bacillus licheniformis ATCC 14580]
Length = 424
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 77/436 (17%), Positives = 191/436 (43%), Gaps = 21/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + ++ + ++ + + + +I GFR GKVP + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVEVDADTFNKALDDAFKKVVKQVSIPGFRKGKVPRGLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ P+ + + RP I + + IE +L
Sbjct: 61 EALYQDALDILLPVEYPKAVEEAGIEPVDRPEIDVEK---------IEKGENLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L + +D V ++++ ++ + + ++ + E GD V +D+
Sbjct: 112 VKPEVKLGEYKGLGIEKDDTAVTDEDVQNELKSLQERQAELVVKEDGKVEEGDTVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS + LVGL+ G +K++E FPE++ ++LAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEVGSGSFIPGFEDQLVGLEAGAEKDVEVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + ++++ A + E + + + +++++ E K++ +
Sbjct: 232 PAVFKVKIHEIKAKELPELDDEFAKDVDEEVGTLAELTEKTKKRLEEAKENEADAKLREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
++ + D+P+++++ E + ++++ + Q + +
Sbjct: 292 LVLKAAENAEADIPQAMIDTELDRMMKEFEQRLQMQGMNLELYFQFSGQDENALKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + + L I + N++VT+EE++ L + + + + +
Sbjct: 352 DAEKRVKSNLTLEAIAKAENLQVTDEEVEEELSKMAEAYNMPVENIKQAIGSTDG----M 407
Query: 413 RAPIFEDKVIDHILKS 428
+ + K ID ++++
Sbjct: 408 KEDLKVRKAIDFLVEN 423
>gi|163942221|ref|YP_001647105.1| trigger factor [Bacillus weihenstephanensis KBAB4]
gi|229013689|ref|ZP_04170818.1| Trigger factor [Bacillus mycoides DSM 2048]
gi|229169216|ref|ZP_04296930.1| Trigger factor [Bacillus cereus AH621]
gi|226738671|sp|A9VIU7|TIG_BACWK RecName: Full=Trigger factor; Short=TF
gi|163864418|gb|ABY45477.1| trigger factor [Bacillus weihenstephanensis KBAB4]
gi|228614282|gb|EEK71393.1| Trigger factor [Bacillus cereus AH621]
gi|228747611|gb|EEL97485.1| Trigger factor [Bacillus mycoides DSM 2048]
Length = 425
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 83/437 (18%), Positives = 184/437 (42%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MSTKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDEAGIFPVAHPEIDIEK---------FEKGQNLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGDYKGLAVEKVETTVTDEDVENEVKALQERQAELVVKEDGTAADGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+GD KE+E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGDSKEVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I E+ + +N++ A E + ++ +++ + KV+ +
Sbjct: 232 PATFKVTIHEIKTKELPELNDEFAKDADEEVATLDELKTKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + D+PE++++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++ +
Sbjct: 408 SEDLKVRKAVDFLVDNA 424
>gi|291485238|dbj|BAI86313.1| trigger factor [Bacillus subtilis subsp. natto BEST195]
Length = 424
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 80/436 (18%), Positives = 187/436 (42%), Gaps = 21/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + + ++ + + + +I GFR GK+P + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVEVDAETFKTALDDAFKKVVKQVSIPGFRKGKIPRGLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ P+ + + RP I + + IE L
Sbjct: 61 EALYQDALDILLPVEYPKAVEEAGIEPVDRPEIDVEK---------IEKGESLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L + +D V ++++ ++ + + +E E G+ V +D+
Sbjct: 112 VKPEVKLGDYKGLGIEKDDTTVTDEDVQNELKALQERQAELVVKEEGAVEEGNTVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS + LVGL+ G +K++E FPE++ +DLAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEVGSGSFIPGFEDQLVGLEAGAEKDVEVTFPEEYHAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + ++++ A E+ + + +++++ E K++ +
Sbjct: 232 PAVFKVKIHEIKAKELPELDDEFAKDIDEEVETLAELTEKTKKRLEEAKENEADAKLREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ S DVP+++V+ E + +L++ + + + +
Sbjct: 292 LVLKASENAEIDVPQAMVDTELDRMLKEFEQRLQMQGMNLELYTQFSGQDEAALKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + + L I + N+EV++EE+ + L + + + + +
Sbjct: 352 DAEKRVKSNLTLEAIAKAENLEVSDEEVDAELTKMAEAYNMPVENIKQAIGST----DAM 407
Query: 413 RAPIFEDKVIDHILKS 428
+ + K ID ++++
Sbjct: 408 KEDLKVRKAIDFLVEN 423
>gi|145223174|ref|YP_001133852.1| trigger factor [Mycobacterium gilvum PYR-GCK]
gi|315443631|ref|YP_004076510.1| trigger factor [Mycobacterium sp. Spyr1]
gi|189035945|sp|A4T2P3|TIG_MYCGI RecName: Full=Trigger factor; Short=TF
gi|145215660|gb|ABP45064.1| trigger factor [Mycobacterium gilvum PYR-GCK]
gi|315261934|gb|ADT98675.1| trigger factor [Mycobacterium sp. Spyr1]
Length = 479
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 72/484 (14%), Positives = 198/484 (40%), Gaps = 25/484 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L ++ + + + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEKLSPTRVRINVEVPFAELEPDIDKAFKQLAQQIRLPGFRPGKAPRKLLEARVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L + +++ + + ++ + +P I + + +E +L D
Sbjct: 61 GAVLEQVVNDALPTRYSQAVTSESLQPIGQPEIEVTK---------LEDNEELVFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I++ L +T D V +++I+ ++ + K E +E GD V++D +
Sbjct: 112 VRPEIDLPDLSTLTITVDPVSVTDEDIEAEIEALQKRFGTLTGVERPAENGDFVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + +GS L E ++GL + K + AG++
Sbjct: 172 TVDGKDVPEAKTEGLSHELGSGQLIEGLDEAIIGLSEDESKTFTTTLVAG----EHAGRE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K + ++++ A F++ +R +K+ + + ++ + +
Sbjct: 228 AEVTVTVKSIKVRELPELDDEFAQLASEFDTMDELRADLREKVTRVKTVQQAEAIRDKAI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLA 354
+ + + +PE++V+ + + L + + + EE A
Sbjct: 288 EVLLEQTEVPLPEAVVQAQVDDTLHNAIHGLDHDEDRFADSLKEQGSSREEFDADNRANA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ + T +++ I +K I+V + ++ L ++ +++L + N L + A
Sbjct: 348 EKAIKTQLLMDAIADKLEIQVGQNDLSERLVLMSRQYGLEPQQLLQM-LQQNNQLPAMFA 406
Query: 415 PIFEDKVIDHILKSVQIVD---RKVTFDQLFDNSSE--SSPEKLLDKSSKVETFQSEEAP 469
+ + ++ + + D ++ + F S + ++ + + S+ SE+
Sbjct: 407 DVRRGLTVAAVVYAATVTDTDGTEIDTTEFFGPSGDQAAAQQGAGEDDSEAAVEVSEDTA 466
Query: 470 SEIS 473
+ S
Sbjct: 467 DDAS 470
>gi|295100803|emb|CBK98348.1| trigger factor [Faecalibacterium prausnitzii L2-6]
Length = 438
Score = 192 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 74/443 (16%), Positives = 183/443 (41%), Gaps = 20/443 (4%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
+ + E EL I + + + + K ++GFR GK P + I+ +YG +
Sbjct: 4 IKCEKLEKSMAELQFSIDAEAFKAAVADVFKKEGKKYPVQGFRKGKAPKALIEKMYGADV 63
Query: 63 L-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ I+E+ E + RP ++++ L + +
Sbjct: 64 FTYDAINELFPAAYEEAVKAAGIEPVGRPEVSVDSAS---------EAEGAALTVKVAVK 114
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P+++I +++ L V + + V ++ ++ ++ + + N +E +E GD V +D+ V
Sbjct: 115 PEVKIGAYNGLTVEKTVHTVSDEAVEAELKRVQERNARELTREGAAENGDIVDIDFEGFV 174
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V E ++ +GS + +VG G++ ++ FPE + +LAGK
Sbjct: 175 DGVAFEGGKAEHYSLTLGSGSFIPGFEDQIVGHAAGEEFDVNVTFPEQYQAAELAGKPAV 234
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ EV ++++LA +++ + + ++ + V+ ++D
Sbjct: 235 FKIKLHEVKYKELPALDDELAKDCSEYDTLDEFKASIRKNNQEQLDKQDDLAVENALVDQ 294
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKR 356
+ + ++P+++ + + ++ F M + ++ ++ + A++
Sbjct: 295 VIDGMEAEIPQAMYDVRMDELVNDFAFRMEQQGLRLEDYLKYMGQSVDQFRASFMPQAEK 354
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V + L + NIE TE+E+ + + + ++ E K+ + + E++ +
Sbjct: 355 QVKIRLALEAVAAAENIEATEDELNAEVKRIADQYKMEEDKVRELIN-----VDEVKHDL 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFD 439
+K ID I +V++ +
Sbjct: 410 AINKAIDFIKSHANVVEKAAEAE 432
>gi|225021667|ref|ZP_03710859.1| hypothetical protein CORMATOL_01695 [Corynebacterium matruchotii
ATCC 33806]
gi|224945658|gb|EEG26867.1| hypothetical protein CORMATOL_01695 [Corynebacterium matruchotii
ATCC 33806]
Length = 452
Score = 192 bits (486), Expect = 2e-46, Method: Composition-based stats.
Identities = 71/441 (16%), Positives = 171/441 (38%), Gaps = 30/441 (6%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + ++ V +P LT+ ++ + I + NI GFR GK P I + +G+
Sbjct: 4 KSSVEKLNDTRVKMTVEVPFEELTNEIDQAYKTIAASVNIPGFRKGKAPRKLIDARFGRG 63
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L + +++ + +++ +P + + + IE ++ D+
Sbjct: 64 PVLEQVVNDALPSRYEAAIAENQLVPLGQPKLDLTK---------IEDGDVIEFTAEVDV 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P I + F+++ V +E+ +++++ + + + + VT+D
Sbjct: 115 RPDITLPDFNEVSVQVPALGDEEEAVNKELDRLRERFAELTDVDEPVAEDNFVTIDIKAV 174
Query: 181 V-DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ ++D + + + VGS DL + ++G GD+
Sbjct: 175 DAEGNPVDDLAADALSYQVGSKDLMDGLDDAIIGKNKGDEVTFTENDN------------ 222
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +I V V+ D F++ +R ++ + + ++ +L
Sbjct: 223 -TITVTINAVKHRTLPEVDEDFVQLASEFDTVDELRADLREQAVAYLKNEQAGAIRDAVL 281
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSS----ANQKSQNVDSIDEEDLQYYHMLA 354
D + F+VP +V+ + + L ++ E++ N+ + +S E+ + A
Sbjct: 282 DKVLADTPFEVPAGMVDEQAHAALHQIFGELAHDEDFMNRVLEAQNSSMEQFMAESKQHA 341
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ + I L + E+ EV+++E+ + + ++ + K N L L A
Sbjct: 342 EKDLRVQIFLDVLAEQEKPEVSQQELTEHIVFTARSYNMSPEEFMSQVTK-GNQLGALFA 400
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
I K + L V + D
Sbjct: 401 DITRGKALAAALCRVNVTDET 421
>gi|300361497|ref|ZP_07057674.1| trigger factor [Lactobacillus gasseri JV-V03]
gi|300354116|gb|EFJ69987.1| trigger factor [Lactobacillus gasseri JV-V03]
Length = 449
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 84/463 (18%), Positives = 176/463 (38%), Gaps = 22/463 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + EL I + ++ + ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTSGELTFEISQEEVKKGLDQAFKRVKKNLRVPGFRKGHVSRVVFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P IT + +++ +
Sbjct: 61 EALYEDALNIVLPEAYAAAVKEAGIDPVGQPQITPVSM---------DKNKPWEMKATVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V K++D ++ + + N +K+ ++ GD VT+DYT
Sbjct: 112 VKPEVKLGDYKGIEVPKQSTRVLVKDVDAELNKRREQNAELVLKDGKAAKGDTVTIDYTG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + S +N +GS + L+G K GD ++ FPED+ KDLAGK+
Sbjct: 172 TIDGKPFDGGSAQNYSLELGSGTFIPGFEDQLIGHKAGDDVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFES---ESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I EV S ++++ A + + + K E
Sbjct: 232 AHFATKIHEVKSKELPKLDDEFAKDVDDSVESLDELKDKIKKDLKKHKEEDAKDAIQDAA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
I + N +VP+++++ + L + M + + + +
Sbjct: 292 IKGAVENATIDEVPQAMIDEDVQNQLNQYLGNMQRQGIDPKTYFKLTGTTEAQLREQLAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K ++ + +E++ + + EK + L
Sbjct: 352 GAAERVKTNLVLEAIVAKEKLDASADEIKQEIKDLAHDYNMDEKVVRRSLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
+ I K ID + + V +K T S++ +K
Sbjct: 407 KHDIVIRKAIDLVADKAKQVAKKATKKSTAKKSTKEDEKKADK 449
>gi|89098927|ref|ZP_01171807.1| trigger factor [Bacillus sp. NRRL B-14911]
gi|89086331|gb|EAR65452.1| trigger factor [Bacillus sp. NRRL B-14911]
Length = 427
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 80/438 (18%), Positives = 190/438 (43%), Gaps = 21/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L + + + ++ + + + + ++ N+ GFR GK+P + +G
Sbjct: 1 MSAKFEKLEGNQGVLTIEVDAEKVKEGLDAAFKKVVAQVNVPGFRKGKMPRGMFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ID ++ E + + RP I + + IE L + +
Sbjct: 61 ESLYQDAIDFLLPEAYASAIDETGIEPVDRPEIDVEQ---------IEKGKSLIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L+V + EV E++++ ++ + + +E ++E GD V +D+
Sbjct: 112 VKPEVKLGEYKGLEVEKLETEVTEEDVNNEITSLQERQAELVVKEEGKAENGDTVVMDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E L G G+ K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLELGSGQFIPGFEEQLEGTAAGESKDVEVTFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K ++ E+ ++++ A E+ A++ ++++ + ++
Sbjct: 232 KAVFKVTVHEIKGKELPELDDEFAKDVDEEVETLDALKEKIRTRLEESKKQESENNLRDT 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
+++ ++ D+P +++NE + ++Q+ + Q + +
Sbjct: 292 VVEKAADNAEIDLPAVMIDNEVDRMMQEFEQRLQMQGMNLELYFQFSGQDESALREQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
++RV + L I + NIEVT+EE+ + L + + + +L +
Sbjct: 352 EGEKRVRINLTLEEIAKAENIEVTDEEVTAELDKMAEMYNMTADAIKQAL----GSLDSV 407
Query: 413 RAPIFEDKVIDHILKSVQ 430
+A + K +D ++++ +
Sbjct: 408 KADLKVKKAVDFLIENSK 425
>gi|325290596|ref|YP_004266777.1| Trigger factor [Syntrophobotulus glycolicus DSM 8271]
gi|324965997|gb|ADY56776.1| Trigger factor [Syntrophobotulus glycolicus DSM 8271]
Length = 445
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 86/435 (19%), Positives = 199/435 (45%), Gaps = 17/435 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E K L++ + + N + + + NI GFR GK P I+ GK
Sbjct: 1 MSVKVENVEKNKVALEITVDVKEFEQAINRAAKKVAGQVNIPGFRKGKAPRHIIERHLGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I++E ID ++ + + + +P + + + E D ++ D
Sbjct: 61 DYIINEAIDPMLGPAYAKAVEESGIAPVSKPEVDLVQA---------EEGKDFIFKVIVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++E+ + L+V EV ++++D ++ + + V+E + E D VT+D+
Sbjct: 112 VKPEVELGQYLGLKVEPQKAEVTDEKVDEELVRRQETHAKLNTVEEGKVENKDSVTIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V ++ + ++GS + L+G G++ ++ FP+++ +L+GK
Sbjct: 172 GFVDGVAFAGGKGEDHELVIGSGTFIPGFEDQLIGSSIGEEVTVKVRFPDEYHSAELSGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + V ++++ A F++ ++ +K+ + +E ++ + + Q+
Sbjct: 232 DAEFKVAVKGIKRKELVPLDDEFAKDISEFDTLEELKADIKEKMIEATELRLKNEFRAQV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
++ N + ++PES+V ++ + I++++ +S + + +++ + Y
Sbjct: 292 VNQAVNHASVEIPESMVASKLDSIVEEMARNLSYQGLTMEQYAKYLNMNEDQLKESYRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + T +VL TI +K I V++EEMQ+ + + ++ ++ L L +
Sbjct: 352 AVEGIKTELVLETISKKEGITVSDEEMQAEMTRLSEQYGRKVEE-LQTMLAARGELDWFK 410
Query: 414 APIFEDKVIDHILKS 428
+ DK ID ++ +
Sbjct: 411 LGMISDKTIDFLVAN 425
>gi|302386740|ref|YP_003822562.1| trigger factor [Clostridium saccharolyticum WM1]
gi|302197368|gb|ADL04939.1| trigger factor [Clostridium saccharolyticum WM1]
Length = 428
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 79/439 (17%), Positives = 180/439 (41%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L V + + + + + NI GFR GK P + ++ +YG
Sbjct: 1 MSLQVEKLEKNMAKLTVEVSAEEFDKALTAAYNKNKGRFNIPGFRKGKAPQAMVEKMYGS 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E ++E + + RP I I + +E L +
Sbjct: 61 GILYEDAVNEALDATYGSAAEESGLDIVSRPEIDIVQ---------VEKGKTLIYTATVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++ + + ++VT+ EV E++I+ ++ + + N V++ E GD+ +D+
Sbjct: 112 VKPEVTLGEYKGIEVTKASAEVTEEDIEAELKRVQEQNSRLITVEDRSVEDGDQTVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E ++ +GS E L+G G++ ++ FP ++ +LAGK
Sbjct: 172 GFVDGKTFEGGKGEDYPLTIGSHSFIDTFEEQLIGKNIGEECDVNVTFPNEYHATELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KE+ +N++ A FE+ + S+K+ E + + ++
Sbjct: 232 PALFKVTVKEIKRKELPELNDEFASEVSEFETLEEYKKDISEKVALRKEKAAATENEDRV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
++ + T ++PE +++++ N ++ M S E +
Sbjct: 292 VEKVVENATMEIPEPMIDSQVNNMVNDYARRMQSQGLSLDQYMKFTGMTLESLKEQMKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL + + NI ++E ++ + + + + + L +++
Sbjct: 352 ALKRIQTRLVLEAVVKAENITASDEAVEKEIAGMAETYKMEASLVRESLGENG--LQQMK 409
Query: 414 APIFEDKVIDHILKSVQIV 432
+ + +D ++ ++V
Sbjct: 410 EDLAVQEAVDFLVAEAKLV 428
>gi|296134055|ref|YP_003641302.1| trigger factor [Thermincola sp. JR]
gi|296032633|gb|ADG83401.1| trigger factor [Thermincola potens JR]
Length = 429
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 88/439 (20%), Positives = 194/439 (44%), Gaps = 17/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E L++ + + + + + SK +I GFR GK P ++ GK
Sbjct: 1 MKVNMEKIEKNLVNLEIEVEQEKFAQAMERAFKKVASKVSIPGFRKGKAPRVLVERKVGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++ I+ E + + + +P+I + + I L + +
Sbjct: 61 EYLYDEALEYIVPEAYFDAVKETKIEPIDKPNIEVVQ---------IGDEKPLIFKAKVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+ P++++ + L+V + + +++I++++ ++ + + E E+++ D V +D+
Sbjct: 112 VKPEVKLGEYKGLEVKKPEVSITDEDIEQELEKLRQRHAQIINVEDGEAQLHDTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V + S K+ +GS + LVG K G+ +EI+ FPE++ DLAGK
Sbjct: 172 GFVDGVAFQGGSGKDYSLELGSGTFIPGFEDQLVGAKVGETREIKVTFPENYHAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+K + ++++LA FE+ ++ S K+K+ +E ++K ++
Sbjct: 232 DAVFKVEVKAIKRKQLAAIDDELAKDVSEFETLEELKKDISNKLKEAAEQKAEHEMKDRL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
+ ++P +VE + ++Q + +S + +S E + +
Sbjct: 292 VAKAVENAEVEIPNIMVEQRIDSMIQSLAQRLSLQGLSLEEYLKFTNSNMEALREQHRPD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ RV +VL I +K NIE TEE+++ + ++ ++ F + + L+
Sbjct: 352 AENRVKATLVLEAIAKKENIEPTEEDLEEEIKTMAAQYNAEPG-LMRTFIENQGNMEALK 410
Query: 414 APIFEDKVIDHILKSVQIV 432
I +K + ++ I
Sbjct: 411 QAIAINKTVQFLVDHATIK 429
>gi|291460377|ref|ZP_06599767.1| trigger factor [Oribacterium sp. oral taxon 078 str. F0262]
gi|291416944|gb|EFE90663.1| trigger factor [Oribacterium sp. oral taxon 078 str. F0262]
Length = 455
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 77/439 (17%), Positives = 181/439 (41%), Gaps = 17/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L V + + + E + + N+ GFR G+ P+ I+ +YG
Sbjct: 1 MSVKVENLEKNMAKLTVEVDAADFDQALTEAYRKNKGRFNLPGFRRGRAPMQMIEKMYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + P+ + RP I++ + IE +L +
Sbjct: 61 QVFYEDALNGLLDKSYPDAAKESGLSIVSRPEISVEQ---------IEKGKNLIYTATVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + + V V EKE++ ++ + + N + E + GD ++D+
Sbjct: 112 LKPEVKLGEYKGVGVEGADSSVTEKEVEDRLRQELEKNARMIDVDREIKKGDISSIDFVG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
SVD ++ +GS + L+G K G++ ++ FPED+ K+LAGK
Sbjct: 172 SVDGEEFAGGRGEDYPLTIGSGTFIPGFEDQLIGHKAGEEVDVNVSFPEDYGAKELAGKA 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
SIK V +++ A F++ + + +++ E + + +++
Sbjct: 232 ALFKVSIKSVKEKQLPEADDEFASEVSEFDTLEEYKKELEKGLREEKEKQAALQNENRVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHMLA 354
D ++ D+PE ++E + + + + + +E+ + A
Sbjct: 292 DKVAENAELDIPEPMLEEQLEQMYRDYAMRLQQQGIPIEQYMQITGQTEEKLKEQMKPGA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+R + +VL + +K NI V +E ++ + ++ + ++ + A +R
Sbjct: 352 ERSIRNSLVLEAVQKKENITVPDERVEEEFQKIADQYKMKYEDLMKTV--SESQKASVRR 409
Query: 415 PIFEDKVIDHILKSVQIVD 433
+ +D +L ++
Sbjct: 410 ELELQATVDMLLSEAKLTK 428
>gi|238853433|ref|ZP_04643812.1| trigger factor [Lactobacillus gasseri 202-4]
gi|238834005|gb|EEQ26263.1| trigger factor [Lactobacillus gasseri 202-4]
Length = 449
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 85/463 (18%), Positives = 176/463 (38%), Gaps = 22/463 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + EL I + ++ + ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTSGELTFEISQEEVKKGLDQAFKRVKKNLRVPGFRKGHVSRVVFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P IT + +++ +
Sbjct: 61 EALYEDALNIVLPEAYAAAVKEAGIDPVGQPQITPVSM---------DKNKPWEMKATVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V K++D ++ + + N +K+ ++ GD VT+DYT
Sbjct: 112 VKPEVKLGDYKGIEVRKQSTRVLVKDVDAELNKRREQNAELVLKDGKAAKGDTVTIDYTG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + S +N +GS + L+G K GD ++ FPED+ KDLAGK+
Sbjct: 172 TIDGKPFDGGSAQNYSLELGSGTFIPGFEDQLIGHKAGDDVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFES---ESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I EV S ++++ A + + + K E
Sbjct: 232 AHFATKIHEVKSKELPKLDDEFAKDVDDSVESLDELKDKIKKDLKKHKEEDAKDAIQDAA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
I + N +VP+++++ + L + M Q + + +
Sbjct: 292 IKGAVENATIDEVPQAMIDEDVQNQLNQYLGNMQRQGIDPQTYFKLTGTTEAQLREQLAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K ++ + +E++ + + EK + L
Sbjct: 352 GAAERVKTNLVLEAIVAKEKLDASADEIKQEIKDLAHDYNMDEKVVRRSLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
+ I K ID + + V +K T S++ +K
Sbjct: 407 KHDIAIRKAIDLVADKAKQVAKKATKKSTAKKSTKEDEKKADK 449
>gi|312134616|ref|YP_004001954.1| trigger factor [Caldicellulosiruptor owensensis OL]
gi|311774667|gb|ADQ04154.1| trigger factor [Caldicellulosiruptor owensensis OL]
Length = 438
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 97/442 (21%), Positives = 200/442 (45%), Gaps = 17/442 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K ++V + + + + + I GFRPGK P S I+ YG+
Sbjct: 1 MEFKIERKGTNKAIIEVEVEAEKFEEGLQKSYLKNAKYFKIPGFRPGKAPRSLIERAYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ID ++ E P++L + RP I I + +E + +
Sbjct: 61 EVFYDDAIDYVLNETYPKVLEESKLEVVSRPEIDIVQ---------VEKGKNFIYKAEVY 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ + +++ + V E+E++ ++ + + N F E + GD VT+D+
Sbjct: 112 VKPEFELGQYKGIEIKKIEYPVAEEEVEHELEHLREENARFVPVERSVQQGDIVTIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD + S ++ + +GS E ++G+ G++KEIE FPED+ LAGKK
Sbjct: 172 FVDGEPINGGSAQDYELTIGSNTFIPGFEEQIIGMNKGEEKEIEVTFPEDYQEPSLAGKK 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+K++ ++++ A FE+ ++ +IK+ ++ + ++ IL
Sbjct: 232 ATFKVKVKDIKVKELPELDDEFAKDVSEFETLEELKQSIRNRIKEKNDQRAKDEMIDAIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
+ I+ + D+PE ++EN+ N ++ V + Q + D+E + A
Sbjct: 292 EKIAQNTSIDIPEPMIENQINYYVEDVARNLQYFGMTYERYLQAIGKTDKEFRSQFRERA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V ++L I + NI+ T+EE+Q L + + K+ + + + ++
Sbjct: 352 EKAVRNNLILEKIAKVENIQATDEELQKELERLAKMYNLEVDKLKERLSEDD--IEYIKE 409
Query: 415 PIFEDKVIDHILKSVQIVDRKV 436
I +K ID I ++ +I+ +V
Sbjct: 410 GIILNKAIDFIYENAKIISEEV 431
>gi|332798600|ref|YP_004460099.1| Trigger factor [Tepidanaerobacter sp. Re1]
gi|332696335|gb|AEE90792.1| Trigger factor [Tepidanaerobacter sp. Re1]
Length = 459
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 96/475 (20%), Positives = 208/475 (43%), Gaps = 24/475 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E L+ + + +L + + + + I GFR GK P I+ YG
Sbjct: 1 MKVNLEKIEKNTAYLNFEVDAEQLEKAIQQAYKKNVKRFAIPGFRRGKAPRKLIEMHYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E + ++ E+ + + + + +P + + IE L
Sbjct: 61 EVFYEEAMQILLPEVYQKGVEEYKLQPVDQPKFDVQQ---------IETGKPLLASAEVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+++I + L+V + + V E E+++Q+ + + N E ++ GD +D+
Sbjct: 112 VKPEVKIEEYKGLEVEKVVHNVTEDEVEKQLLIMQEKNARLVAVEDKAAEGDIAIIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
S+DN E +N +GS E ++G+ G+ K+I FPED++ ++LAGK
Sbjct: 172 SIDNEPFEGGKAENYPLQLGSGMFIKGFEEQVIGMMPGETKDISVTFPEDYNAEELAGKN 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++KE+ + +++D A F++ + ++ K++ ++ + ++ I+
Sbjct: 232 AVFTVTLKELKRKELLPLDDDFAKDVSEFDTLAELKEDIKNKLQLEAKSVAEDSLRASII 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
D + K D+PE ++ E + IL K+ + + ++ +E YH +
Sbjct: 292 DKLIEKAEVDIPEVMINQEVDNILLKLAINLKQSTGYDLTTYLESTGMTLQELRDRYHDV 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R V T +VL IG+ NI VT+EE+ + + + + ++ P ++
Sbjct: 352 AVRNVKTSLVLEEIGKLENITVTDEELDNKIKELAEMYKKPLEEYEKSL--SPENKESIK 409
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEA 468
+ +K+ D ++++ I+++ N+ + + E E+ SE+
Sbjct: 410 DLVLTEKIFDFLIENSNIIEKVKD------NTKDDTIEAKEADIVDDESDNSEKT 458
>gi|229062168|ref|ZP_04199492.1| Trigger factor [Bacillus cereus AH603]
gi|229135319|ref|ZP_04264113.1| Trigger factor [Bacillus cereus BDRD-ST196]
gi|228648142|gb|EEL04183.1| Trigger factor [Bacillus cereus BDRD-ST196]
gi|228717151|gb|EEL68827.1| Trigger factor [Bacillus cereus AH603]
Length = 425
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 83/437 (18%), Positives = 184/437 (42%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MSTKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDEAGIFPVAHPEIDIEK---------FEKGQNLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGDYKGLAVEKVETTVTDEDVENEVKALQERQAELVVKEEGTAADGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+GD KE+E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGDSKEVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I E+ + +N++ A E + ++ +++ + KV+ +
Sbjct: 232 PATFKVTIHEIKTKELPELNDEFAKDADEEVATLDELKTKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + D+PE++++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++ +
Sbjct: 408 SEDLKVRKAVDFLVDNA 424
>gi|304316358|ref|YP_003851503.1| trigger factor [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302777860|gb|ADL68419.1| trigger factor [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 432
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 80/442 (18%), Positives = 187/442 (42%), Gaps = 18/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E +++ IP + + N + + N+ GFR G+ P I+ YG+
Sbjct: 1 MSSNLKKLENSVATIELNIPKEKFEEGLNFSYKKNVGRFNVPGFRRGRAPRIIIERYYGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I+ + + E + PSI I + I DL +
Sbjct: 61 GVLYEDAIEHLFPDAYQEAIDSLKIEPIDSPSIDILQ---------IGKGKDLIIEAVVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
++P +E+ + ++V + V +++++ ++ ++ + N ++ +++GD V + +
Sbjct: 112 VMPDVELGQYKGIEVKKVEYNVKDEDVENRLEQMRQRNARVVPVEDRAAQMGDIVDISFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E N +GS E +VG D+ ++ FPED+ +++L GK
Sbjct: 172 GFIDGKPFEGGKSDNYSLELGSKTFIPGFEEQIVGHNINDEFDVNVKFPEDYRVEELKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + +N+D A F++ ++ +++K+ +++K
Sbjct: 232 DAVFKVKLLSIKYKELPELNDDFAKDVSEFDTLDELKEDIKRELKEQYNKSAEEEMKENA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+ + ++PE +++ + + L+ + + + + + ++ + H
Sbjct: 292 VKAVVENAKVEIPEVMIDRQIDISLRDLDYNLRYQGLNLDKYLEITGKSKDDLRKEMHDD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A RV T +V+ IG+ NI T+ E+++ L + + + + + + + ++
Sbjct: 352 AALRVKTQLVVDKIGKVENITATDGEVENRLNEMARNYNVNVEDLKKEL--NESQINNIK 409
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I K ID I ++ +IVD++
Sbjct: 410 DDIVYFKTIDFIFENSKIVDKE 431
>gi|291278624|ref|YP_003495459.1| trigger factor [Deferribacter desulfuricans SSM1]
gi|290753326|dbj|BAI79703.1| trigger factor [Deferribacter desulfuricans SSM1]
Length = 470
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 98/441 (22%), Positives = 215/441 (48%), Gaps = 14/441 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K +E ++EL + IP + ++F + I NI GFR GK P S + +
Sbjct: 1 MKVEVKNAEKSQKELSIEIPVEKYNEAFEAEYKKIAPTVNIPGFRKGKAPKSIVLKQFKH 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++++I + + + L++ P++ E + ++ D+
Sbjct: 61 RISVNALEKVINDSIIQALTEHKINPLSSPNV---------KDVNFEEGEPITFKVYVDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYTV 179
P+ ++ D + ++I EV E +++ + ++ N+++E KE + D V +D+
Sbjct: 112 FPEYDVEKIDGFEFVKEIDEVTEDDVNEVLEKLKTQNISYEPKEDATVENGDMVVIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD E S K+ F+VGS L + L+G K+G++ EIE FPED+ K+LAGK
Sbjct: 172 YVDGEPFEGGSAKDYSFVVGSNTLLKDFENGLIGHKSGEEFEIEVKFPEDYYEKNLAGKT 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KEV + ++++ A E+ ++ +++++ + + ++ + QI
Sbjct: 232 ATFKINLKEVKKRVEPKLDDEFAKDVDEECETLEDLKNKIRKELEEEVQQIAKENLYEQI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGIL-QKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++ + +FD+P++L+ + + Q ++ ++ + E+ +++Y LA++
Sbjct: 292 IEKLIEANSFDIPDTLIREQAERLATQTMQQYQYMYGVSAEQLGFDKEKLVEHYWNLAEK 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V +G++L I EK NI+VT+EE+ + + + + + Y + ++ +
Sbjct: 352 QVKSGLILNKIAEKENIDVTQEEIDKKIEELANKLKRNVDDYKKELESYGG-INNIKNNL 410
Query: 417 FEDKVIDHILKSVQIVDRKVT 437
DK+ + I+ ++ ++ VT
Sbjct: 411 LTDKIFNFIISKNKVEEKVVT 431
>gi|227877364|ref|ZP_03995435.1| trigger factor [Lactobacillus crispatus JV-V01]
gi|256848702|ref|ZP_05554136.1| trigger factor cell division [Lactobacillus crispatus MV-1A-US]
gi|293381818|ref|ZP_06627790.1| trigger factor [Lactobacillus crispatus 214-1]
gi|295692728|ref|YP_003601338.1| trigger factor [Lactobacillus crispatus ST1]
gi|227863032|gb|EEJ70480.1| trigger factor [Lactobacillus crispatus JV-V01]
gi|256714241|gb|EEU29228.1| trigger factor cell division [Lactobacillus crispatus MV-1A-US]
gi|290921604|gb|EFD98634.1| trigger factor [Lactobacillus crispatus 214-1]
gi|295030834|emb|CBL50313.1| Trigger factor [Lactobacillus crispatus ST1]
Length = 443
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 84/460 (18%), Positives = 187/460 (40%), Gaps = 26/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + +L I + + ++ ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTTGDLTFDISQDEIKLGLDQAFRRVKKNLRVPGFRKGHVSRVIFDQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +A +P I + D D ++ +
Sbjct: 61 EALYEDALNIVLPNAYSAAVKEAGIKAVGQPQIVPVSMDKD---------KDWTMKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V +K+ID ++ + + N +K+ ++E GD VT+DY
Sbjct: 112 VEPEVKLGDYKGIEVPKQNTRVYQKDIDAELDKRREQNAELVLKKGKAEKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D+ E S +N +GS + L G + GD ++ FPED+ KDLAGK+
Sbjct: 172 TIDDKPFEGGSAENYSLELGSGAFIPGFEDQLEGHEAGDDVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ++ ++ + +K+ E ++
Sbjct: 232 AHFATKIHEVKSKQLPKLDDEFAKDVDDSVDTLDDLKEKIKKDLKEQKEQQANDAIQEAA 291
Query: 298 LD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++ +SN ++P+++++ + + L + M Q +++ +
Sbjct: 292 IEGAVSNATIDEIPDAMIQEDVDTQLNQYLGNMQRQGIDPQTYYKLTNTNEQQLRSQFEK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I +++ T+EE+ + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVAAEDLKATKEEIDKEIKDLASEYNMDEKMVRNTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
I K +D I + ++V +L + + E
Sbjct: 407 GHDITVRKAMDLITDNA----KQVAKSKLENKEDDDKKES 442
>gi|323703644|ref|ZP_08115287.1| trigger factor [Desulfotomaculum nigrificans DSM 574]
gi|323531416|gb|EGB21312.1| trigger factor [Desulfotomaculum nigrificans DSM 574]
Length = 434
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 89/440 (20%), Positives = 192/440 (43%), Gaps = 17/440 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E L++ + + ++ + ++ I + NI GFR GK P ++ GK
Sbjct: 1 MKATAERIEKNTVLLEIEVEAEKMDQAMDQAYRKIVKQVNIPGFRRGKAPRFMVERYVGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E + ++ E E L + + +P I I +G E L + + +
Sbjct: 61 ETLFGEAAEIVVPEAYTEALKETETEPIAQPKIDIVQG---------EPGKPLIFKATVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++ + + L+V + EV E+++++++ + + V++ E + GD +D+T
Sbjct: 112 VKPEVTLGEYKGLEVKRPSTEVTEEDVNKELERLQNRHARLITVEDGEVQNGDTAIIDFT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +N +GS E LVG+K G++K++ FPED+ ++LAGK
Sbjct: 172 GYVDGEAFEGGTAENYSLTIGSGTFIPGFEEQLVGVKVGEEKDVNVTFPEDYHAENLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+KE+ ++++ A F++ ++ K+KQ +E + V+
Sbjct: 232 PATFKVKVKELKRKELAPLDDEFAKDVSEFDTLEELKNDIRNKLKQTAEEQAKAAVENGA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+D T ++PE +VE + + +L V + +E Q
Sbjct: 292 VDAAVANATVEIPEVMVEQKVDQMLNNVNQRLMQQGINLDQYFQYTNSSVDEMRQRMKPD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ V +VL I + IE +EEE+ L + + + +++ + + +
Sbjct: 352 AEKTVRNELVLDAIAKAEKIEASEEEINEELKKIAE-YVRQDVEIVRKTLELQGEMGHII 410
Query: 414 APIFEDKVIDHILKSVQIVD 433
I K + + ++ ++++
Sbjct: 411 QDIVRRKTVSFLAENAKVIE 430
>gi|296331630|ref|ZP_06874099.1| trigger factor [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305675411|ref|YP_003867083.1| prolyl isomerase (trigger factor) [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151225|gb|EFG92105.1| trigger factor [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305413655|gb|ADM38774.1| prolyl isomerase (trigger factor) [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 424
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 79/436 (18%), Positives = 187/436 (42%), Gaps = 21/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + + ++ + + + +I GFR GK+P + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVEVDAETFKTALDDAFKKVVKQVSIPGFRKGKIPRGLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ P+ + + RP I + + IE L
Sbjct: 61 EALYQDALDILLPVEYPKAVEEAGIEPVDRPEIDVEK---------IEKGESLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L + +D V ++++ ++ + + +E E G+ V +D+
Sbjct: 112 VKPEVKLGDYKGLGIEKDDTAVTDEDVQNELKTLQERQAELVVKEEGAVEEGNTVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS + LVGL+ G +K++E FPE++ ++LAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEVGSGSFIPGFEDQLVGLEAGAEKDVEVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + ++++ A E+ + + +++++ E K++ +
Sbjct: 232 PAVFKVKIHEIKAKELPELDDEFAKDIDEEVETLAELTEKTKKRLEEAKENEADAKLREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ S DVP+++V+ E + +L++ + + + +
Sbjct: 292 LVLKASENAEIDVPQAMVDTELDRMLKEFEQRLQMQGMNLELYTQFSGQDEAALKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + + L I + N+EV++EE+ + L + + + + +
Sbjct: 352 DAEKRVKSNLTLEAIAKAENLEVSDEEVDAELTKMAEAYNMPVENIKQAIGST----DAM 407
Query: 413 RAPIFEDKVIDHILKS 428
+ + K ID ++++
Sbjct: 408 KEDLKVRKAIDFLVEN 423
>gi|119961627|ref|YP_948117.1| trigger factor [Arthrobacter aurescens TC1]
gi|166229012|sp|A1R7A5|TIG_ARTAT RecName: Full=Trigger factor; Short=TF
gi|119948486|gb|ABM07397.1| trigger factor [Arthrobacter aurescens TC1]
Length = 460
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 79/443 (17%), Positives = 170/443 (38%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L+V +P L S + + + S+ + GFR GKVP I G+
Sbjct: 1 MKSAVENLTATRVKLNVEVPFEELKPSIDAAYKTVASQIQVPGFRKGKVPSKLIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L I++ + + + R RP + I E +LK ++ D
Sbjct: 61 GYVLETAINDGLNGWYQAAVQETGVRPLSRPEVEITE-----VPDPSATDGELKFQVEID 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ + ++V E E ++D+ + E+ + E ++ D +T+D T
Sbjct: 116 VRPEIELPDYAGIKVEVAAAESSEADVDKSLDELRGRFGTLKSVERPAKNDDFLTIDITA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D ++ S + + VG+ + E + GL ++ E D AG+
Sbjct: 176 TIDGEDID--SAAGLSYQVGAGTMLEGLDEAVTGLSADEEAIFETTLV----GGDHAGES 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +K V N+D A F++ + +R +++ + + ++L
Sbjct: 230 AQVKVVVKAVKERELPEANDDFAQLASEFDTLAELREDLAKQAADSKVVEQGVEARDKVL 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + VP+S+VE + D EE +R
Sbjct: 290 DKLVELVEVPVPDSVVEEQIEAHFNP--------ENAHGEGDHDTEEHRAEVKANTERAF 341
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L I +K ++V++ E+ + ++ + + + + + +
Sbjct: 342 QNEIILDAIADKEEVDVSQNELIDYIVTTASQYGMDPNQFAQIIDQS-GQVPMMVSEVRR 400
Query: 419 DKVIDHILKSVQIVDRKVTFDQL 441
K + +L ++VD + L
Sbjct: 401 RKALAVVLGQAEVVDSEGNKVDL 423
>gi|319647219|ref|ZP_08001441.1| trigger factor [Bacillus sp. BT1B_CT2]
gi|317390566|gb|EFV71371.1| trigger factor [Bacillus sp. BT1B_CT2]
Length = 424
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 77/436 (17%), Positives = 190/436 (43%), Gaps = 21/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + ++ + ++ + + + +I GFR GKVP + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVEVDADTFNKALDDAFKKVVKQVSIPGFRKGKVPRGLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ P+ + + RP I + + IE +L
Sbjct: 61 EALYQDALDILLPVEYPKAVEEAGIEPVDRPEIDVEK---------IEKGENLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L + +D V ++++ ++ + + ++ + E GD V +D+
Sbjct: 112 VKPEVKLGEYKGLGIEKDDTAVTDEDVQNELKSLQERQAELVVKEDGKVEEGDTVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS + LVGL+ G +K++E FPE++ ++LAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEVGSGSFIPGFEDQLVGLEAGAEKDVEVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + ++++ A E+ + + +++++ E K++ +
Sbjct: 232 PAVFKVKIHEIKAKELPELDDEFAKDVDEEVETLAELTEKTKKRLEEAKENEADAKLREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
++ + D+P+++++ E + ++++ + Q + +
Sbjct: 292 LVLKAAENAEADIPQAMIDTELDRMMKEFEQRLQMQGMNLELYFQFSGQDENALKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + + L I + N++VT+EE++ L + + + + +
Sbjct: 352 DAEKRVKSNLTLEAIAKAENLQVTDEEVEEELSKMAEAYNMPVENIKQAIGSTDG----M 407
Query: 413 RAPIFEDKVIDHILKS 428
+ + K ID ++++
Sbjct: 408 KEDLKVRKAIDFLVEN 423
>gi|332653033|ref|ZP_08418778.1| trigger factor [Ruminococcaceae bacterium D16]
gi|332518179|gb|EGJ47782.1| trigger factor [Ruminococcaceae bacterium D16]
Length = 475
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 83/438 (18%), Positives = 177/438 (40%), Gaps = 23/438 (5%)
Query: 1 MQVI-EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M+V + E EL + + + + + R++ ++ GFR GK P I+S+YG
Sbjct: 1 MKVTNVEKKEKSTVELTIQVEAGEFEAAVQKAYLKNRNRISVPGFRKGKAPRKIIESMYG 60
Query: 60 KSI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + I+++ + ++ P + I E D L
Sbjct: 61 SGVFYEDAINDVYPGAYEAAVKEQGLEDMGHPVMDIVEVGKD----------GLTFTALV 110
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
+ P++++ + LQ + EV + +I+ ++ K E +GD +D+
Sbjct: 111 SVRPEVKLGQYKGLQAPKTFNEVTDADIENELEPYIKRATRLVSVERPISMGDTAVIDFE 170
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ E + +GS + L+GL GD+K+++ FPED+ +KDLAGK
Sbjct: 171 GFDNGKPFEGGKGTDYSLEIGSGSFVPGFEDQLIGLSVGDEKDLDITFPEDY-VKDLAGK 229
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + +KEV V+++ A FE+ + + +K+KQ E + +
Sbjct: 230 AVVFHVKVKEVKESQIPEVDDEFAKDVSEFETLADFKKDLGEKLKQRREAQAESAFESAV 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK-- 355
L+ + + ++P+ +VE + + ++ + M S + + + AK
Sbjct: 290 LEQLIDNLEAEIPDGMVETQLDKVMDEYAMRMQSQGMAMNDYLKMMGMTPEMMRASAKPS 349
Query: 356 --RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
R+V + L + N+E+T+E+ + + ++ E ++ + L+
Sbjct: 350 ALRQVQLELALDAVAAAENMEITDEDCAKEITKLAEQYNITEDQVKAALS-----MDMLK 404
Query: 414 APIFEDKVIDHILKSVQI 431
+ K D ++ +
Sbjct: 405 HDLRLQKANDFVVAQAVV 422
>gi|323466768|gb|ADX70455.1| Trigger factor [Lactobacillus helveticus H10]
Length = 440
Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats.
Identities = 81/443 (18%), Positives = 180/443 (40%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + EL I + + ++ ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTTGELTFDISKDEIKLGLDQAFRRVKKNLRVPGFRKGHVSRVIFDQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + A +P I + D D ++ +
Sbjct: 61 EALYEDALNIVLPNAYSAAVKEAGIAAVGQPQIVPVSMDKD---------KDWTMKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V +K++D ++ + + N +K+ +S GD VT+DY
Sbjct: 112 VEPEVKLGDYKGIEVPKQNTRVYQKDVDAELDKRREQNAELVLKKGKSAKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D E S +N +GS + L+G + GD ++ FP+D+ KDLAGK+
Sbjct: 172 TIDGKEFEGGSAENYSLELGSGAFIPGFEDQLIGHEAGDDVDVVVTFPKDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ++ ++ +++K E ++
Sbjct: 232 AHFATKIHEVKSKQLPKLDDEFAKDVDDSVDTLDELKDKIKKQLKDQKEQAANDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++ T ++P+++++++ + L + M Q +++ +
Sbjct: 292 IEGAVKNATVDEIPDAMIQDDVDTQLNQYLGNMQRQGIDPQTYYKLTNTNEQQLRSQFAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I EK ++ T+EE+ + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVEKEGLKATKEEIDKEIKDLAAEYNMDEKTVRNTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
I K +D + + + V +
Sbjct: 407 SHDITVRKAMDLVTDNAKQVAKA 429
>gi|184155095|ref|YP_001843435.1| trigger factor [Lactobacillus fermentum IFO 3956]
gi|227514780|ref|ZP_03944829.1| cell division trigger factor [Lactobacillus fermentum ATCC 14931]
gi|260663638|ref|ZP_05864527.1| trigger factor tig [Lactobacillus fermentum 28-3-CHN]
gi|238692960|sp|B2GBC3|TIG_LACF3 RecName: Full=Trigger factor; Short=TF
gi|183226439|dbj|BAG26955.1| trigger factor [Lactobacillus fermentum IFO 3956]
gi|227086889|gb|EEI22201.1| cell division trigger factor [Lactobacillus fermentum ATCC 14931]
gi|260551864|gb|EEX24979.1| trigger factor tig [Lactobacillus fermentum 28-3-CHN]
gi|299783050|gb|ADJ41048.1| Trigger factor (TF) [Lactobacillus fermentum CECT 5716]
Length = 435
Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats.
Identities = 78/449 (17%), Positives = 179/449 (39%), Gaps = 24/449 (5%)
Query: 1 MQVIEK-FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M V + S+ K L I + + + + + ++ GFR G VP + +YG
Sbjct: 1 MSVKWERDSDAPKGTLTFDIDTETIQKGIDHAFTRTQKRISVPGFRKGHVPRTIFNQMYG 60
Query: 60 KS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + + +++++ + + + +P + + E L +
Sbjct: 61 EESLYQDALNDVLPDAYEAAIKEAGIEPVDQPQVNVESM---------EKGQPWTLTATV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDY 177
+ P++ + + ++V + V + ++D ++ + ++ + GD V +DY
Sbjct: 112 AVKPEVTLGDYKGMEVPEQDTSVSDADVDSELENKRQQQAELVLKEDEAAADGDTVVIDY 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
SVD + S N ++GS + LVG K G+ ++ FPED+ KDLAG
Sbjct: 172 EGSVDGEKFDGGSADNYSLVLGSGSFIPGFEDQLVGHKAGEDVDVNVTFPEDYHAKDLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K I EV ++++ A E+ + ++ ++++ E + ++
Sbjct: 232 KDALFKVKIHEVKEKQLPELDDEFAKDVDEDVETLAELKDKVKKQLQDQKEAAAKAAIED 291
Query: 296 QILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYY 350
++ ++P+++++++ N LQ+ M Q +++ + +
Sbjct: 292 AAIEAAVANAETEEIPQAMLDDDTNRQLQQYLAGMQQQGINPQMYFQITNTTEDDLRKQF 351
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A +RV T +VL + + N+ T+E++Q+ + ++ E+ +
Sbjct: 352 ADDAAKRVKTNLVLEAVVKDANLNATDEDVQNEIADLAKQYGMDEEAVSKAL-----TRD 406
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFD 439
L I K +D I S + + D
Sbjct: 407 MLEHDIEIKKAVDLIADSAKQTAKAADKD 435
>gi|222528714|ref|YP_002572596.1| trigger factor [Caldicellulosiruptor bescii DSM 6725]
gi|254788981|sp|B9MQ31|TIG_ANATD RecName: Full=Trigger factor; Short=TF
gi|222455561|gb|ACM59823.1| trigger factor [Caldicellulosiruptor bescii DSM 6725]
Length = 438
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 97/440 (22%), Positives = 196/440 (44%), Gaps = 17/440 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K ++V + + + + + I GFRPGK P S I+ YG+
Sbjct: 1 MEFKIEKKGTNKAIIEVEVEAEKFEEGLQKSYLKNAKYFKIPGFRPGKAPRSLIERAYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ID ++ E P+++ + RP + I + +
Sbjct: 61 EVFYDDAIDYVLNETYPKVIEESKLEVVSRPEVDIVQVG---------KGKSFIYKAEVY 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ + +++T+ V E+E++ ++ + + N F E E GD VT+D+
Sbjct: 112 VKPEFELGQYKGVEITKIEYPVAEEEVEHELEHLREENARFVPVERPVENGDIVTIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD + S K+ + +GS E L+G+ G++KEIE FPED+ LAGKK
Sbjct: 172 FVDGEPINGGSAKDYELTIGSNTFIPGFEEQLIGMNKGEEKEIEVTFPEDYQEPSLAGKK 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+K++ ++++ A FE+ ++ +I++ ++ + ++ IL
Sbjct: 232 ATFKVKVKDIKVKELPELDDEFAKDVSEFETLEELKANIRNRIREKNDKRAKDEMIDAIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
+ I+ + D+PE ++EN+ N ++ V + Q + D+E + A
Sbjct: 292 EKIAQNTSIDIPEPMIENQINYYVEDVARNLQYFGMTYERYLQAIGKTDKEFRSQFRERA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V ++L I + NI+ TEEE+Q L + + K+ + + + ++
Sbjct: 352 EKAVRNNLILEKIAKVENIQATEEELQKELERLAKMYNLEVDKLKERLSEDD--IEYIKE 409
Query: 415 PIFEDKVIDHILKSVQIVDR 434
I +K ID I ++ +I+
Sbjct: 410 GIILNKAIDFIYENAKIISE 429
>gi|194017346|ref|ZP_03055958.1| trigger factor [Bacillus pumilus ATCC 7061]
gi|194011214|gb|EDW20784.1| trigger factor [Bacillus pumilus ATCC 7061]
Length = 424
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 84/436 (19%), Positives = 190/436 (43%), Gaps = 21/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + + ++ + + + +I GFR GKVP + +G
Sbjct: 1 MSVKWEKQEGNEGILTVEVDAETFNKALDDAFKKVVKQVSIPGFRKGKVPRGLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D ++ P+ + + RP I + + IE L
Sbjct: 61 ESLYQDALDILLPVEYPKAIDEAGIEPVDRPEIDVEK---------IEKGESLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L V +D V ++++ ++ + +E E GD V +D+
Sbjct: 112 VKPEVKLGDYKGLNVEKDDATVTDEDVQEELKGMQNRQAELVVKEEGAIENGDTVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS E LVGL+TG +K++E FPE++ +DLAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEVGSNSFIPGFEEQLVGLETGAEKDVEVTFPEEYHAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + ++++ A E+ + + +++++ E K++ +
Sbjct: 232 PAVFKVKIHEIKAKELPALDDEFAKDVDEEVETLAELTEKTKKRLEEAKENEAEGKLREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
+++ S D+P+++V+ E + ++++ + Q + +
Sbjct: 292 LVEKASENAEVDIPQAMVDTELDRMMKEFEQRLQMQGMNLELYFQFSGQDENALKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A +RV + + L I N++V++EE++ L + + +++ ++ + +
Sbjct: 352 DAAKRVKSNLTLEAIAAAENLQVSDEEVEEELSKMAEAYNMP----IENIKQAIGSTDAM 407
Query: 413 RAPIFEDKVIDHILKS 428
+ + K ID ++++
Sbjct: 408 KEDLKVRKAIDFLVEN 423
>gi|302871324|ref|YP_003839960.1| trigger factor [Caldicellulosiruptor obsidiansis OB47]
gi|302574183|gb|ADL41974.1| trigger factor [Caldicellulosiruptor obsidiansis OB47]
Length = 438
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 95/442 (21%), Positives = 198/442 (44%), Gaps = 17/442 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K ++V + + + + + I GFRPGK P S I+ YG+
Sbjct: 1 MEFKIEKKGTNKAIIEVEVEAEKFEEGLQKSYLKNAKYFKIPGFRPGKAPRSLIERAYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ID ++ E P+++ + RP + I + D + R
Sbjct: 61 EVFYDDAIDYVLNETYPKVIEESKLEVVSRPEVDIVQVGKD---------KNFIYRAEVY 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ + +++ + V E+E++ ++ + + N F E + GD VT+D+
Sbjct: 112 VKPEFELGQYKGIEIKKIEYPVAEEEVEHELEHLREENARFVPVERPVQQGDIVTIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD ++ + ++ + +GS E ++G+ G++KEIE FPED+ LAGKK
Sbjct: 172 FVDGEPIKGGAAQDYELTIGSNAFIPGFEEQIIGMNKGEEKEIEVTFPEDYQEPSLAGKK 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+K++ ++++ A FE+ ++ +IK+ ++ + ++ IL
Sbjct: 232 ATFKVKVKDIKVKELPELDDEFAKDVSEFETLEELKASIRNRIKEKNDQRAKDEMIDAIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
+ I+ + D+PE ++EN+ N ++ V + Q + D E + A
Sbjct: 292 EKIAQNTSIDIPEPMIENQINYYIEDVARNLKYFGMTYERYLQAIGKTDAEFRSQFRERA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V ++L I + NI+ T+EE+Q L + + K+ + + + ++
Sbjct: 352 EKAVRNNLILEKIAKVENIQATDEELQKELERLAKMYNLEVDKLKERLSEDD--IEYIKE 409
Query: 415 PIFEDKVIDHILKSVQIVDRKV 436
I +K ID I ++ +I+ V
Sbjct: 410 GIILNKAIDFIYENAKIISEGV 431
>gi|326391007|ref|ZP_08212556.1| trigger factor [Thermoanaerobacter ethanolicus JW 200]
gi|325992952|gb|EGD51395.1| trigger factor [Thermoanaerobacter ethanolicus JW 200]
Length = 432
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 86/442 (19%), Positives = 191/442 (43%), Gaps = 18/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E +++ IPS + + N + SK N+ GFR GK P + ++ YG+
Sbjct: 1 MGASLKKLEKSIATIELTIPSEKFEEGLNFAFKKNASKFNVPGFRRGKAPRAIVERYYGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ + E+ E L D P I I + I DL L +
Sbjct: 61 GVLYEDAVEYVFDEVYKEALKTFDLEPVDYPDINILQ---------IGKGKDLILEATVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYT 178
++P++E+ + +++ + +V + +++ ++ ++ + N E +E GD +D+
Sbjct: 112 VMPEVELGEYKGIEIEKIEYDVYDGDVEYELEKLRQQNARIIPIEGRAAESGDIAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E +N + +GS + ++G D ++ FPED+ +++L GK
Sbjct: 172 GFIDGKPFEGGKAENYELELGSNTFIPGFEDQIIGHNVNDTFDVSVTFPEDYRVEELRGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A FE+ ++ +K+++ + ++K +
Sbjct: 232 SAVFKVTLKALNKKELPELDDEFAKDVSEFETLEELKADIRKKLEEKNRLDAENEMKEKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
+ + D+P+ +VE + + L+ + + + + E +
Sbjct: 292 VMKVVENAKVDIPDVMVERQIDISLRDLDYNLRYQGLDLNSYLSITGKTLENLRKEMWDG 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A RV T +V+ I + NI+VTEEE+++ L + + + ++ + + ++
Sbjct: 352 ALNRVKTQLVIDKIAKVENIQVTEEELENRLKEMAESYRINLEEFKKSL--TESQINGIK 409
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I K ID I +I+ ++
Sbjct: 410 EDIAYYKTIDFIFSECKIISKE 431
>gi|302342887|ref|YP_003807416.1| trigger factor [Desulfarculus baarsii DSM 2075]
gi|301639500|gb|ADK84822.1| trigger factor [Desulfarculus baarsii DSM 2075]
Length = 448
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 99/460 (21%), Positives = 191/460 (41%), Gaps = 18/460 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + +KR L V +P+ + + + KA IKGFR GKVP + ++ YG
Sbjct: 1 MKVNVEQINTVKRALTVEVPAAEVDKAIEKLFAKHGRKAKIKGFRAGKVPRAVLERYYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + ++ E + + +P G + D ++ +D+
Sbjct: 61 QVAFEAAEVLVTEHTNPAIDEAGLSPLAQPEFDF--------DGPPQKGQDFAFKVLFDV 112
Query: 121 LPQIE--ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVD 176
PQ + S+ ++ + ++EI++++ ++ ++ ++ GD V VD
Sbjct: 113 RPQFDLAPESYKGFEIKEPNLVAGDEEINKRLDDLRARQAMLVPLEEDRPAQTGDVVVVD 172
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
Y + +E + +NV +G+ + E LV ++ GD+ E ED
Sbjct: 173 YQSFEGDEPVEGGAAENVDVELGAGQVREEIEVALVKVRPGDEVETTV-RIEDKKDGADV 231
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLA--VRLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
K VR +K + L +++D A V FE+ A+R Q ++ +V+
Sbjct: 232 TKDVRFKLVVKAIKKKLLPDLDDDFARSVSPQFETLDALRQRIRQDMEDAFAREKDMQVR 291
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
RQILD+I FD+P+SLV E +++ + + V E+ + A
Sbjct: 292 RQILDHIRELGQFDLPDSLVAQEVENMVESFKARLRQNGMDPDAVGLDAEKLATDFRPEA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+++V GIVLG I E +++VTEE+ + + + ++ N + + A
Sbjct: 352 EKKVRAGIVLGRISEVESVDVTEEDFTAHYEKVSAQTG-QPADVIKEIYNKNNMMGSVIA 410
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLL 454
+ E+K + I I + V +L + +
Sbjct: 411 QLLEEKTLQAIKSGAII--KSVDPSELAQEMANDQAREQE 448
>gi|16079875|ref|NP_390701.1| trigger factor [Bacillus subtilis subsp. subtilis str. 168]
gi|221310763|ref|ZP_03592610.1| trigger factor [Bacillus subtilis subsp. subtilis str. 168]
gi|221315088|ref|ZP_03596893.1| trigger factor [Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221320007|ref|ZP_03601301.1| trigger factor [Bacillus subtilis subsp. subtilis str. JH642]
gi|221324289|ref|ZP_03605583.1| trigger factor [Bacillus subtilis subsp. subtilis str. SMY]
gi|2829689|sp|P80698|TIG_BACSU RecName: Full=Trigger factor; Short=TF; AltName: Full=Vegetative
protein 2; Short=VEG2
gi|1770074|emb|CAA99536.1| trigger factor [Bacillus subtilis]
gi|2635288|emb|CAB14783.1| prolyl isomerase (trigger factor) [Bacillus subtilis subsp.
subtilis str. 168]
Length = 424
Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats.
Identities = 80/436 (18%), Positives = 187/436 (42%), Gaps = 21/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + + ++ + + + +I GFR GK+P + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVEVDAETFKTALDDAFKKVVKQVSIPGFRKGKIPRGLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ P+ + + RP I + + IE L
Sbjct: 61 EALYQDALDILLPVEYPKAVEEAGIEPVDRPEIDVEK---------IEKGESLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L + +D V ++++ ++ + + +E E G+ V +D+
Sbjct: 112 VKPEVKLGEYKGLGIEKDDTTVTDEDVQNELKALQERQAELVVKEEGAVEEGNTVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS + LVGL+ G +K++E FPE++ +DLAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEVGSGSFIPGFEDQLVGLEAGAEKDVEVTFPEEYHAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + ++++ A E+ + + +++++ E K++ +
Sbjct: 232 PAVFKVKIHEIKAKELPELDDEFAKDIDEEVETLAELTEKTKKRLEEAKENEADAKLREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ S DVP+++V+ E + +L++ + + + +
Sbjct: 292 LVLKASENAEIDVPQAMVDTELDRMLKEFEQRLQMQGMNLELYTQFSGQDEAALKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + + L I + N+EV++EE+ + L + + + + +
Sbjct: 352 DAEKRVKSNLTLEAIAKAENLEVSDEEVDAELTKMAEAYNMPVENIKQAIGST----DAM 407
Query: 413 RAPIFEDKVIDHILKS 428
+ + K ID ++++
Sbjct: 408 KEDLKVRKAIDFLVEN 423
>gi|262045890|ref|ZP_06018854.1| trigger factor tig [Lactobacillus crispatus MV-3A-US]
gi|260573849|gb|EEX30405.1| trigger factor tig [Lactobacillus crispatus MV-3A-US]
Length = 443
Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats.
Identities = 83/460 (18%), Positives = 186/460 (40%), Gaps = 26/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + +L I + + ++ ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTTGDLTFDISQDEIKLGLDQAFRRVKKNLRVPGFRKGHVSRVIFDQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +A +P I + D D ++ +
Sbjct: 61 EALYEDALNIVLPNAYSAAVKEAGIKAVGQPQIVPVSMDKD---------KDWTMKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V +K+ID ++ + + N +K+ ++E GD VT+DY
Sbjct: 112 VEPEVKLGDYKGIEVLKQNTRVYQKDIDAELDKRREQNAELVLKKGKAEKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D+ E S +N +GS + L G + GD ++ FPED+ KDLAGK+
Sbjct: 172 TIDDKPFEGGSAENYSLELGSGAFIPGFEDQLEGHEAGDDVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV ++++ A ++ ++ + +K+ E ++
Sbjct: 232 AHFATKIHEVKLKQLPKLDDEFAKDVDDSVDTLDDLKEKIKKDLKEQKEQQANDAIQEAA 291
Query: 298 LD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++ +SN ++P+++++ + + L + M Q +++ +
Sbjct: 292 IEGAVSNATIDEIPDAMIQEDVDTQLNQYLGNMQRQGIDPQTYYKLTNTNEQQLRSQFEK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I +++ T+EE+ + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVAAEDLKATKEEIDKEIKDLASEYNMDEKMVRNTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
I K +D I + ++V +L + + E
Sbjct: 407 GHDITVRKAMDLITDNA----KQVAKSKLENKEDDDKKES 442
>gi|312978250|ref|ZP_07789993.1| trigger factor [Lactobacillus crispatus CTV-05]
gi|310894769|gb|EFQ43840.1| trigger factor [Lactobacillus crispatus CTV-05]
Length = 443
Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats.
Identities = 84/460 (18%), Positives = 187/460 (40%), Gaps = 26/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + +L I + + ++ ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTTGDLTFDISQDEIKLGLDQAFRRVKKNLRVPGFRKGHVSRVIFDQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +A +P I + D D ++ +
Sbjct: 61 EALYEDALNIVLPNAYSAAVKEAGIKAVGQPQIVPVSMDKD---------KDWTMKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V +K+ID ++ + + N +K+ ++E GD VT+DY
Sbjct: 112 VEPEVKLGDYKGIEVLKQNTRVYQKDIDAELDKRREQNAELVLKKGKAEKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D+ E S +N +GS + L G + GD ++ FPED+ KDLAGK+
Sbjct: 172 TIDDKPFEGGSAENYSLELGSGAFIPGFEDQLEGHEAGDDVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ++ ++ + +K+ E ++
Sbjct: 232 AHFATKIHEVKSKQLPKLDDEFAKDVDDSVDTLDDLKEKIKKDLKEQKEQQANDAIQEAA 291
Query: 298 LD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++ +SN ++P+++++ + + L + M Q +++ +
Sbjct: 292 IEGAVSNATIDEIPDAMIQEDVDTQLNQYLGNMQRQGIDPQTYYKLTNTNEQQLRSQFEK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I +++ T+EE+ + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVAAEDLKATKEEIDKEIKDLASEYNMDEKMVRNTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
I K +D I + ++V +L + + E
Sbjct: 407 GHDITVRKAMDLITDNA----KQVAKSKLENKEDDDKKES 442
>gi|295425156|ref|ZP_06817861.1| trigger factor [Lactobacillus amylolyticus DSM 11664]
gi|295065215|gb|EFG56118.1| trigger factor [Lactobacillus amylolyticus DSM 11664]
Length = 439
Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats.
Identities = 80/438 (18%), Positives = 178/438 (40%), Gaps = 22/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + EL I + + ++ ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTTGELTFDISQDEIKLGLDQAFRRVKKNLRVPGFRKGHVSRVIFDQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +A +P I + ++ D ++
Sbjct: 61 EALYEDALNIVLPNAYAAAVKEAKIKAVGQPQI---------QAVSMDKGKDWTMKAIVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + L+V + V K+ID ++ + + N +K+ ++ GD VT+DY
Sbjct: 112 VQPEVKLGDYKGLEVPKQNTRVYAKDIDAELNKRREQNAELVLKKDKAAKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D E S +N +GS + L+G K GD+ ++ FP+D+ KDLAGK+
Sbjct: 172 TIDGKAFEGGSAQNYSLELGSGAFIPGFEDQLIGHKAGDEVDVVVTFPKDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV S ++++ A ++ ++ + +K E + +++
Sbjct: 232 AHFATKLHEVKSKQLPKLDDEFAKDVDDSVDTLDDLKAKIKKNLKDQKEKEAKNAIQQAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++ ++P+++++ + + L++ M Q + + +
Sbjct: 292 VEAAVKNAEIDEIPDAMIQEDIDTQLRQYLGNMQRQGIDPQTYYKLTNTNESQLRAQFAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV +VL TI +K N + T+EE+ + + EK + + L
Sbjct: 352 DAAERVKINLVLETIADKENFKATKEEIDKEIKDLAKEYNMDEKTVRNTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQ 430
I K +D + S +
Sbjct: 407 SHDITVRKAMDLVTDSAK 424
>gi|317129830|ref|YP_004096112.1| trigger factor [Bacillus cellulosilyticus DSM 2522]
gi|315474778|gb|ADU31381.1| trigger factor [Bacillus cellulosilyticus DSM 2522]
Length = 431
Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats.
Identities = 86/441 (19%), Positives = 190/441 (43%), Gaps = 18/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L V + S+R+ + +E + + K N+ GFR GK+P + +G
Sbjct: 1 MTAKWEKLEGNSGVLTVEVDSSRVDTALDEAFKKVVKKVNVPGFRKGKIPRKMFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D ++ + E + + RP I I E +L + +
Sbjct: 61 ESLYQDALDILLPQAYSEAIEESGIEPVDRPDIDIETM---------EQGQNLVFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+ P++++ + L+V EV +++ID ++ ++ + + E E + GD V +D+
Sbjct: 112 VKPEVKLGEYKGLEVQAQESEVTDEDIDAELKQLQERHADLVAIEDGEVQTGDTVVMDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E N +GS + LVG+KTG++KE+ FP ++ ++LAGK
Sbjct: 172 GFVDGEPFEGGQADNYSLEIGSGQFIPGFEDQLVGVKTGEEKEVNVEFPAEYHSEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ ++++ A E+ ++ +K++ + + +
Sbjct: 232 PATFKVKVHDIKRKELPELDDEFAKDVNEDVETLEDLKKDLREKMETSKKQQAEATTRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ + DVPE+++ E + +LQ+ + + +E +H
Sbjct: 292 LVQKATENAEIDVPEAMITTETDRMLQEFGQRLQAQGMSLDMYYQFSQTDEEGMKAQFHD 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I E N+EV++E++ + + + + + + L
Sbjct: 352 DAEKRVRANLTLEAIAEAENVEVSDEDVDKEIGEMAETYKRSADE-IKQILAMQGGVNTL 410
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ + K ID ++++ + V+
Sbjct: 411 KGDLKVRKAIDLLVENSKEVE 431
>gi|227893376|ref|ZP_04011181.1| cell division trigger factor [Lactobacillus ultunensis DSM 16047]
gi|227864791|gb|EEJ72212.1| cell division trigger factor [Lactobacillus ultunensis DSM 16047]
Length = 443
Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats.
Identities = 81/460 (17%), Positives = 185/460 (40%), Gaps = 26/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + +L I + + ++ ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTTGDLTFDISQDEIKLGLDQAFRRVKKNLRVPGFRKGHVSRVIFDQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + A +P I + D ++ +
Sbjct: 61 EALYEDALNIVLPNAYSAAVKEAGIAAVGQPQIVPVSM---------DKGKDWTMKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V +K++D ++ + + N +K+ ++E GD VT+DY
Sbjct: 112 VQPEVKLGDYKGIEVPKQNTRVYQKDVDAELDKRREQNAELVLKKGKAEKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D E S +N +GS + LVG + GD ++ FP+D+ KDLAGK+
Sbjct: 172 TIDGKEFEGGSAENYSLELGSNAFIPGFEDQLVGHEAGDDVDVVVTFPKDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ++ ++ + +K E ++ ++
Sbjct: 232 AHFATKIHEVKSKQLPKLDDEFAKDVDDSVDTLDDLKEKIKKDLKDQKEQAAKEAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++ T ++P+++++ + + L + M Q +++ +
Sbjct: 292 IEGAVKNATVDEIPDAMIKEDVDTQLNQYLGNMQRQGIDPQTYYKLTNTNEQQLRSQFAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I +K ++ T++E+ + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVDKEGLKATKDEIDKEIKDLAAEYNMDEKTVRNTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
I K +D + + ++V +L S+ E
Sbjct: 407 SHDITVRKAMDLVTDNA----KQVAKSKLEAKDSDDKKES 442
>gi|321312355|ref|YP_004204642.1| trigger factor [Bacillus subtilis BSn5]
gi|320018629|gb|ADV93615.1| trigger factor [Bacillus subtilis BSn5]
Length = 424
Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats.
Identities = 82/436 (18%), Positives = 189/436 (43%), Gaps = 21/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + + ++ + + + +I GFR GK+P + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVEVDAETFKTALDDAFKKVVKQVSIPGFRKGKIPRGLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ P+ + + RP I + + IE L
Sbjct: 61 EALYQDALDILLPVEYPKAVEEAGIEPVDRPEIDVEK---------IEKGESLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYT 178
+ P++++ + L + +D V ++++ ++ + + VKE + E G+ V +D+
Sbjct: 112 VKPEVKLGEYKGLGIEKDDTTVTDEDVQNELKALQERQAELVVKEEGTVEEGNTVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS + LVGL+ G +K++E FPE++ +DLAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEVGSGSFIPGFEDQLVGLEAGAEKDVEVTFPEEYHAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + ++++ A E+ + + +++++ E K++ +
Sbjct: 232 PAVFKVKIHEIKAKELPELDDEFAKDIDEEVETLAELTEKTKKRLEEAKENEADAKLREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ S DVP+++V+ E + +L++ + + + +
Sbjct: 292 LVLKASENAEIDVPQAMVDTELDRMLKEFEQRLQMQGMNLELYTQFSGQDEAALKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + + L I + N+EV++EE+ + L + + + + +
Sbjct: 352 DAEKRVKSNLTLEAIAKAENLEVSDEEVDAELTKMAEAYNMPVENIKQAIGST----DAM 407
Query: 413 RAPIFEDKVIDHILKS 428
+ + K ID ++++
Sbjct: 408 KEDLKVRKAIDFLVEN 423
>gi|311031426|ref|ZP_07709516.1| trigger factor [Bacillus sp. m3-13]
Length = 428
Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats.
Identities = 80/438 (18%), Positives = 181/438 (41%), Gaps = 21/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V + + + + + + +K N+ GFR GK+P + +G
Sbjct: 1 MSAKWEKLEGNQGVLTVEVDAETVNKGLDAAFKKVVTKVNVPGFRKGKMPRGMFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + + +P I I I L
Sbjct: 61 ESLYQDALDIILPTAYSNAVVETGIEPVDQPEIDIET---------IAKNEKLVFTAKVI 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L+V + V +++++ + + + +E E GD V +D+
Sbjct: 112 VKPEVKLGEYKGLEVERLDANVTDEDVEADLKGLQERQAELAVKEEGTVENGDTVVMDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V+ E +N +GS E LVGL G +KE+E FPE++ ++LAGK
Sbjct: 172 GFVNGEAFEGGKAENYSLEIGSNTFIPGFEEQLVGLAAGAEKEVEVSFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ E+ + ++++ A E+ ++ ++++ + ++
Sbjct: 232 PAVFKVTVHEIKTKELPALDDEFAKDVDEEVETLEELKAKTKARLEEAKKTEADNHLRDT 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++D + ++PE++V+ E + ++++ + + +E
Sbjct: 292 LVDKAAANAEVEIPEAMVKTETDRMVREFEQRLQMQGMNMELYFQFSGQDEEALRTQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I + NIEVT+EE + + G + ++ +L L
Sbjct: 352 DAEKRVKMNLTLEAISKAENIEVTDEEANEEIEKMAGMYNMSVDQIKQAL----GSLEGL 407
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ + K ID ++++ +
Sbjct: 408 KEDLKIRKAIDFLVENSK 425
>gi|147677138|ref|YP_001211353.1| trigger factor [Pelotomaculum thermopropionicum SI]
gi|189035946|sp|A5D446|TIG_PELTS RecName: Full=Trigger factor; Short=TF
gi|146273235|dbj|BAF58984.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Pelotomaculum
thermopropionicum SI]
Length = 438
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 75/440 (17%), Positives = 188/440 (42%), Gaps = 17/440 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E L++ + + +L+ + + ++ GFR GK P + GK
Sbjct: 1 MKANAERIEKNTVLLEIEVDAEQLSQAMERAYRKLVKSVSVPGFRRGKTPRPIFERYVGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
S + E +D ++ + + +P + + + +E + + +
Sbjct: 61 SALYEEAMDYLVPVAYFKAVEDTGIEPIEKPKVEVVQ---------VEEGKPVLFKATVQ 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + +L++T+ EV +++++++ + E + D +D+
Sbjct: 112 VKPEVKLGQYKELELTRPSTEVSGEDVEKELVRLQNRYAKLVTLEEGTVEKGDTAIIDFA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D ++ ++ +GS E LVG+ G+ +EI+ FPE++ ++LAGK
Sbjct: 172 GRIDGEPIKGGEGRDYSLEIGSGSFVQGFEEQLVGMAAGETREIDVTFPENYKAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + ++KE+ +++D A F++ +R S K+KQ +E +VK
Sbjct: 232 EAKFTVTVKEIKRKEIAPLDDDFAKDVSEFDTLEELRNDLSNKLKQAAENRAEYQVKMDA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ + ++PE ++ N+ ++ + +SS ++ E+
Sbjct: 292 VTKAVDNAEVEIPEVMITNQLADMIGTLASRLSSQGLSLEDYLKYTGSTLEDMRASMMPE 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+R V T +VL I I+ ++EE+ + + + + + +K L +
Sbjct: 352 AERNVKTALVLEAIARAEGIKASDEEVDEEIKKMAAHYQQDPEVVRKMLEK-EGQLKFIA 410
Query: 414 APIFEDKVIDHILKSVQIVD 433
+ +K + ++++ +I++
Sbjct: 411 EGLVREKTVKFLVENARILE 430
>gi|116074351|ref|ZP_01471613.1| trigger factor [Synechococcus sp. RS9916]
gi|116069656|gb|EAU75408.1| trigger factor [Synechococcus sp. RS9916]
Length = 479
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 70/439 (15%), Positives = 178/439 (40%), Gaps = 18/439 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V G + ++V +P+ R +S+ + + N+ GFR GKVP + + G
Sbjct: 7 KVKTTARPGSRLAVEVAVPAERCKESYEAAVARLSRTINLPGFRKGKVPRAVLLQQIGPL 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++ ++ + E + + A +P +T + + + +L + L D+
Sbjct: 67 RIRATALESMVDGVWREAIDQEKIEALGQPDLTD---GFETLLEAFDPSKELTVTLETDV 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDY 177
P ++ + L+ + D ++D + + + E + + V
Sbjct: 124 APVPKLKTTKGLKAEAESVSYDPAKVDEMIEQSRRQMATLVPVENRAAANGDVAVVGFAG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T S D +E S ++ + + E +VG+ GD+K +E FPED+ +D G
Sbjct: 184 TYSDDGSAIEGGSADSMDVELEDGRMIPGFVEGVVGMAIGDEKTVECQFPEDYPKEDARG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K ++K++ + +++ A + + + + +R +++K +E +
Sbjct: 244 RKASFVINLKDLKTRELPELDDAFAKQASDKGTMAELRADLEERLKDDAERRQKSNRHDA 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
++ + + ++PESLV+ E ++++ + + +++ + D ++ A
Sbjct: 304 LIAALVEQLEVELPESLVQQEVRNLVEQTAGQFAQQGMDVKSLFTPDLVRNLMESSRPEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL-AELR 413
R+ + L + E ++V + + + + + + G P L +
Sbjct: 364 VERLRRSLALSALAESEGLKVEDAAIDAKVKEVKKQLAGERDI-------DPQRLRDAVI 416
Query: 414 APIFEDKVIDHILKSVQIV 432
+ DK++ + + +
Sbjct: 417 DDLLRDKLLGWLEDNSTVT 435
>gi|88809959|ref|ZP_01125464.1| trigger factor [Synechococcus sp. WH 7805]
gi|88786149|gb|EAR17311.1| trigger factor [Synechococcus sp. WH 7805]
Length = 478
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 82/479 (17%), Positives = 193/479 (40%), Gaps = 16/479 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V G + +++ +P+ R S+ E I + N+ GFR GKVP + + G
Sbjct: 7 KVTTASRPGSRLAVEMAVPAERSQASYEEAINRLSRSVNLPGFRKGKVPRTVLVQQLGAL 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++ +++ I + L++ A +P + G + + L + + D+
Sbjct: 67 RIRATALETLVESIWRDALAQETIEALGQPEL---SGGFEELLDTFKPGEALTVTMETDV 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVDY 177
P ++ S L+ + D ++D + + + E V
Sbjct: 124 APSPKLKSTKGLKAEAESVAFDAAKVDEMLEQSRRQLATVVPVEGRKAEKGDIAVVGFKG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T S D +E S ++ + + E +VG+ GD K ++ FPED+ +D G
Sbjct: 184 TYSDDGSEIEGGSADSMDVDLEHGRMIPGFVEGVVGMAVGDSKTVDCTFPEDYPKEDARG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K +K++ + +++ A + E+ + +R Q++K +E R
Sbjct: 244 RKASFAIELKDLKTRELPELDDAFAKQASEQETLADLRSDLEQRLKDDAERRSRSNRHDA 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
+L + + ++PESL++ E ++++ + + Q++ + + ++ A
Sbjct: 304 LLAALVEQLEVELPESLIQQEVRNLVEQTAGQFAQQGMDVQSLFTPELVRNLMESSRPEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ R+ + L + E + V + E+ + L + G+ G + +
Sbjct: 364 EERLRRSLALTALAESEKLSVDDTELNTKLKEVKGQLSG------ERNIDPERLRQAVLD 417
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
+ ++K++ + ++ I ++ + S+ S K +K ++ +A SE +
Sbjct: 418 DLLQEKLLGWLEENSTITEKAAEPETAEPKDSKPSAAKKSASKTKTSKAKTAKADSENA 476
>gi|78211621|ref|YP_380400.1| trigger factor [Synechococcus sp. CC9605]
gi|119371023|sp|Q3ANI7|TIG_SYNSC RecName: Full=Trigger factor; Short=TF
gi|78196080|gb|ABB33845.1| trigger factor [Synechococcus sp. CC9605]
Length = 469
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 72/473 (15%), Positives = 190/473 (40%), Gaps = 18/473 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V + + + V +P R S+ + I + N+ GFR GKVP + + G
Sbjct: 7 KVTTEARPSSRLAVTVTVPGERCKTSYEDAITSLSRSINLPGFRKGKVPRTVLVQQLGGV 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++++I + + + +P + D E +L L D+
Sbjct: 67 RIKATALEKLIDNAWRDAIQQESLEPISQPDL---SSGFDGLLESFEPGKELTFTLEADV 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVDY 177
P ++ + L+ + D +D + + K E + +
Sbjct: 124 APTPKLKTTKGLKAEFETVAYDASRVDAMIEDSRKQMATVVPVEGRAAQNGDIAVLGFKG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T + D +E S ++ + + + E ++G+K G+ K ++ FP+D+ +D G
Sbjct: 184 TYTDDGSEIEGGSADSMDVDLENGRMIPGFIEGVIGMKVGETKTVDCQFPDDYPKEDARG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K +K++ + ++++ A + E+ + +R Q++K +E +
Sbjct: 244 RKASFEIELKDLKTRELPELDDEFAKQASEQETLADLRKDLEQRLKDDAERRQTSNRRDA 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
++ + + ++PE+L++ E +L++ + + +++ + D +Q A
Sbjct: 304 LVAALVEQLEVELPEALIQQESRNLLEQTAAQFAQQGMDVKSLFTPDLVRNLMQNSRPEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE-LR 413
+ R+ L + E +I++ ++ + + + + +K++ + P L + +
Sbjct: 364 EERLRRSFALTALAEAEDIKLDDKAVDAKIKEV-------KKELSADAKIDPERLRQAVM 416
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
+ +D+++ + ++ I ++ D + + K + SK + +
Sbjct: 417 DDLIQDRLMGWLEENSTITEKAPAADDSKAEAKKKPAAKKAEAKSKSKADAKD 469
>gi|51246391|ref|YP_066275.1| trigger factor [Desulfotalea psychrophila LSv54]
gi|50877428|emb|CAG37268.1| related to trigger factor [Desulfotalea psychrophila LSv54]
Length = 446
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 83/451 (18%), Positives = 185/451 (41%), Gaps = 13/451 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ V +P+ + ++ + IKGFR GKVP + I Y
Sbjct: 6 MDIKVEEVSKLTRKVIVTLPAGDVQPKIEAAYNKLKKEVKIKGFRRGKVPSAIIVKNYKD 65
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E +++++E + K P I + + D D+
Sbjct: 66 QVEAELSEKLVQENYFNAVEKEGLDPVTHPEIQVVKYNED---------GSFTFEAHVDV 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P E+ ++ L++ + V +++ID ++AE+ K A V + + GD VTVD+
Sbjct: 117 RPDFELGNYKGLEIEKPAVAVADEDIDAEIAEMQKKAAALHVVDRPAVDGDMVTVDFQGF 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + Q +G+ + + LVG+ G+ + + FPE+H + GK +
Sbjct: 177 ENGEALAQVKSDDHQVDLGAGSMGKDFEAKLVGMSKGEVADHQITFPENHPNVIIKGKTI 236
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
S+K+V + ++++ A F S ++ + + E + +++
Sbjct: 237 DFKLSVKDVKERILADLDDEFAKDAGEEFNSMDELKASIRARRIKKLEESAEGVISDRLM 296
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ Y F+VP LV +E ++++ ++ + + E+ ++ +A +RV
Sbjct: 297 QKLLEGYEFEVPTRLVAHESEQMIKQTEQQLQQSGLTLEAAGLSKEKLVEENVEVAAQRV 356
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+L I E +I+V +E+M + + ++ + FQ + L +
Sbjct: 357 RGDFLLKKIAEVEDIKVADEDMDRGFKRIGDMYNMTVAQVKEFFQSRDDLLP-FMNELLN 415
Query: 419 DKVIDHILKSVQ-IVDRKVTFDQLFDNSSES 448
+K++ + + ++ V + +
Sbjct: 416 EKILAFLRSEAVMVEEKAVEATDVQKEGASE 446
>gi|229163429|ref|ZP_04291380.1| Trigger factor [Bacillus cereus R309803]
gi|228619998|gb|EEK76873.1| Trigger factor [Bacillus cereus R309803]
Length = 425
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 183/437 (41%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MSTKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDEAGIFPVAHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKALQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+GD K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGDSKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I E+ + +N++ A + ++ +++ + KV+ +
Sbjct: 232 PATFKVTIHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + D+PE++++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++ +
Sbjct: 408 AEDLKVRKAVDFLVDNA 424
>gi|256832186|ref|YP_003160913.1| trigger factor [Jonesia denitrificans DSM 20603]
gi|256685717|gb|ACV08610.1| trigger factor [Jonesia denitrificans DSM 20603]
Length = 455
Score = 190 bits (481), Expect = 5e-46, Method: Composition-based stats.
Identities = 74/480 (15%), Positives = 183/480 (38%), Gaps = 33/480 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + K +L V + + L + I I GFR GKVP I G+
Sbjct: 1 MKSTVETLDPTKAKLTVEVEYDELQPAIEHAYTHIAQDITIPGFRKGKVPPRIIDQRIGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L ++E + + L++ + R +PS+ + + + +L+ + +
Sbjct: 61 AAVLEHAVNEALPGFYRDALAQSELRPLGQPSVEVTK-----VPLGDDEQGNLEFVVELE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ D L + V +++++ ++ + + + + GD V +D T
Sbjct: 116 VRPDFDLPELDGLSLQVPNVTVSDEDVEERLTSLRERFGTLVGVDRPAADGDFVVIDLTA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + ++ S + + +G+ ++ E L GL + + D AG++
Sbjct: 176 KIGDETVDSVSG--ISYEIGTGNMLEGLDEALTGLSADETTTFTAPL----AGGDHAGEE 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V ++D A + F++ ++ ++ +++ + R +L
Sbjct: 230 ATVTVTATAVKERQLPEADDDFAQMASEFDTIDELKDDLREQ-AKNAAASNQAVAARDLL 288
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
NK F +P ++E E N L+ D+E +
Sbjct: 289 VAELNKVEFPLPAGVIEAEVNRHLEG-------------EGRLEDDEHRAEVTQETTTAL 335
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++L T+ EK ++V ++E+ L ++ ++ + + + + +
Sbjct: 336 KNQLLLDTLAEKLEVKVAQQELLDYLISASRQYGMDPQQFISTLDQ-QGQIPAMVGEVAR 394
Query: 419 DKVIDHILKSVQIVDRK---VTFDQLFDNSSESSPEKLLDKS--SKVETFQSEEAPSEIS 473
K + L+S+++ D V + + + + + + K+ E E+A + S
Sbjct: 395 SKSLAVALRSIEVKDEDGNVVDLSEFIGSDEDDAAAEEIAKAAQQAAEGDSEEQATEDAS 454
>gi|91203768|emb|CAJ71421.1| similar to trigger factor (TF) [Candidatus Kuenenia
stuttgartiensis]
Length = 435
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 87/439 (19%), Positives = 175/439 (39%), Gaps = 10/439 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + K+ L IP + ++ + S + GFR G VP ++ +
Sbjct: 1 MNITIENAGPCKKLLKFEIPKEAIESELEKKTLEACSTVQLPGFRKGHVPRKLVEKRFET 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + +I E + L + P + + +E L ++ ++
Sbjct: 61 QIKEDVKQSLISESYEKALEENKIEPVGEPKFDP-----EFGNLNLEIGKPLTFDVTLEV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
LP E+ + LQ+ + +V E+EID+ + E+A F V E D + D V
Sbjct: 116 LPVFEVGQYKGLQLKKKAIDVSEEEIDKLLKELALQKAQFTVVSGGGIEEKDLIICDCKV 175
Query: 180 SVDNVILEDQSKKNVQFIVGS---ADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
V+ + + + + V + GS E + L G TG I + +IK+
Sbjct: 176 EVNGITVFEDNDIEVSVVDGSKIAHTEIPELVKYLKGNTTGATCTINVVLSDTFNIKEYR 235
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
GK+ + + E+ P ++ DLA L F+S ++ ++++ + ++ Q
Sbjct: 236 GKEASIKLVVNEIKRLSPPEIDEDLAKTLNFKSLEDLKLNARKRLEINKNIWAENDLRTQ 295
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
ILD + + FD+P+ + + K + ++ + V E +
Sbjct: 296 ILDTLLAQTQFDLPKDFINKHAEERVYKHQLDLVKRGVPFEEVQKQTESMKSVSEESVVK 355
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ +++ I +K I VTE E++ + + + KK++ + L+ LR +
Sbjct: 356 ELKASLIIEYIAKKEKIFVTENEVEQRIVEIAYSYNTD-KKVVRKQLETQGNLSYLRNEM 414
Query: 417 FEDKVIDHILKSVQIVDRK 435
EDK + +LK +I
Sbjct: 415 REDKTLAFLLKEAKIEQEA 433
>gi|312622972|ref|YP_004024585.1| trigger factor [Caldicellulosiruptor kronotskyensis 2002]
gi|312203439|gb|ADQ46766.1| trigger factor [Caldicellulosiruptor kronotskyensis 2002]
Length = 438
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 96/440 (21%), Positives = 195/440 (44%), Gaps = 17/440 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K ++V + + + + + I GFRPGK P S I+ YG+
Sbjct: 1 MEFKIEKKGTNKAIIEVEVEAEKFEEGLQKSYLKNAKYFKIPGFRPGKAPRSLIERAYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ID ++ E P+++ + RP + I + +
Sbjct: 61 EVFYDDAIDYVLNETYPKVIEESKLEVVSRPEVDIVQVG---------KGKSFIYKAEVY 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ + +++ + V E+E++ ++ + + N F E E GD VT+D+
Sbjct: 112 VKPEFELGQYKGIEIKKIEYPVAEEEVEHELEHLREENARFVPVERPVENGDIVTIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD + S K+ + +GS E L+G+ G++KEIE FPED+ LAGKK
Sbjct: 172 FVDGEPINGGSAKDYELTIGSNTFIPGFEEQLIGMNKGEEKEIEVTFPEDYQEPSLAGKK 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+K++ ++++ A FE+ ++ +IK+ ++ + ++ IL
Sbjct: 232 ATFRVKVKDIKVKELPELDDEFAKDVSEFETLEELKANIRNRIKEKNDQKAKDEMIDAIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
+ I+ + D+PE ++EN+ N ++ V + Q + D+E + A
Sbjct: 292 EKIAQNTSIDIPEPMIENQINYYVEDVARNLQYFGMTYERYLQAIGKTDKEFRSQFRERA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V ++L I + NI+ T+EE+Q L + + K+ + + + ++
Sbjct: 352 EKAVRNNLILEKIAKVENIQATDEELQKELERLAKMYNLEVDKLKERLSEDD--IEYIKE 409
Query: 415 PIFEDKVIDHILKSVQIVDR 434
I +K ID I ++ +I+
Sbjct: 410 GIILNKAIDFIYENAKIISE 429
>gi|227497465|ref|ZP_03927694.1| FKBP family peptidyl-prolyl cis-trans isomerase (trigger factor)
[Actinomyces urogenitalis DSM 15434]
gi|226833039|gb|EEH65422.1| FKBP family peptidyl-prolyl cis-trans isomerase (trigger factor)
[Actinomyces urogenitalis DSM 15434]
Length = 454
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 85/476 (17%), Positives = 187/476 (39%), Gaps = 29/476 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + +L V +P L S + + I S+ + GFR G VP I G+
Sbjct: 1 MKSTVENLDPARIKLTVEVPYEELKPSLDAAYKQIGSQIQVPGFRRGHVPNRVIDQRVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
S++ E ++ + + E +++ ++P I I E + + E L
Sbjct: 61 GSVIQEAVNNKLSDFYREAMTEAGRVPMLQPEIEITE----LPNVTGEQGGQLVFTAEVT 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IEI +++VT D V ++++D ++ + + + + +++ GD VT+D
Sbjct: 117 VRPEIEIPELSEIEVTVDSVAVTDEDVDTELDNLRARFGSLKSVKRKAKTGDFVTIDLKA 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S V + +G ++ L GLKTG+ F + G++
Sbjct: 177 VIDGEEVD--SASGVSYEIGKGNMLKGLDTALRGLKTGE----SATFTTQLAGGPHEGEE 230
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + V ++D A + F++ +R ++ + + +L
Sbjct: 231 AEVTVTAEAVKQRELPEADDDFAQMASEFDTIEELREDLRKQAGERKAGDQAVAARDALL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + K F++P+ LV+NE LQ + D+ V
Sbjct: 291 EQLREKIEFELPDGLVDNEIAQHLQ-------------AEGKAADDPHADEIREDITTGV 337
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L + EK + VT++E+ L Q ++ + + Q+ + + I
Sbjct: 338 RDQIILDVLAEKLQVGVTQDELIEFLIQTAQQYGMEPGQFMQGAQQ-AGQIPAFVSEIAR 396
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+K + L+ V + D + V + + + + + + + +E
Sbjct: 397 NKSLAMGLRQVSVKDSDGKDVDLTEFIGSDELDAQNLVSQVAEAAAEDEDKAEENE 452
>gi|67461742|sp|Q6AK58|TIG_DESPS RecName: Full=Trigger factor; Short=TF
Length = 441
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 83/451 (18%), Positives = 185/451 (41%), Gaps = 13/451 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L R++ V +P+ + ++ + IKGFR GKVP + I Y
Sbjct: 1 MDIKVEEVSKLTRKVIVTLPAGDVQPKIEAAYNKLKKEVKIKGFRRGKVPSAIIVKNYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E +++++E + K P I + + D D+
Sbjct: 61 QVEAELSEKLVQENYFNAVEKEGLDPVTHPEIQVVKYNED---------GSFTFEAHVDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P E+ ++ L++ + V +++ID ++AE+ K A V + + GD VTVD+
Sbjct: 112 RPDFELGNYKGLEIEKPAVAVADEDIDAEIAEMQKKAAALHVVDRPAVDGDMVTVDFQGF 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ L + Q +G+ + + LVG+ G+ + + FPE+H + GK +
Sbjct: 172 ENGEALAQVKSDDHQVDLGAGSMGKDFEAKLVGMSKGEVADHQITFPENHPNVIIKGKTI 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
S+K+V + ++++ A F S ++ + + E + +++
Sbjct: 232 DFKLSVKDVKERILADLDDEFAKDAGEEFNSMDELKASIRARRIKKLEESAEGVISDRLM 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ Y F+VP LV +E ++++ ++ + + E+ ++ +A +RV
Sbjct: 292 QKLLEGYEFEVPTRLVAHESEQMIKQTEQQLQQSGLTLEAAGLSKEKLVEENVEVAAQRV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+L I E +I+V +E+M + + ++ + FQ + L +
Sbjct: 352 RGDFLLKKIAEVEDIKVADEDMDRGFKRIGDMYNMTVAQVKEFFQSRDDLLP-FMNELLN 410
Query: 419 DKVIDHILKSVQ-IVDRKVTFDQLFDNSSES 448
+K++ + + ++ V + +
Sbjct: 411 EKILAFLRSEAVMVEEKAVEATDVQKEGASE 441
>gi|229543648|ref|ZP_04432708.1| trigger factor [Bacillus coagulans 36D1]
gi|229328068|gb|EEN93743.1| trigger factor [Bacillus coagulans 36D1]
Length = 428
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 88/438 (20%), Positives = 196/438 (44%), Gaps = 21/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + +EG + L V + + + S ++ + + + N+ GFR GK+P + +G
Sbjct: 1 MSAKWEKTEGNQGILTVEVDAETVDKSLDKAFKKVVKQINVPGFRKGKIPRPLFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + + + P+I + + E L + +
Sbjct: 61 ESLYQDALDMIVPGEYEKAIEETGIEPVDTPNIDVEQM---------EKGKPLIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++++ + L+V + +V +++++ ++ ++ + ++ E+E+GD V +D+
Sbjct: 112 VKPEVKLGEYKGLEVEKPDTDVTDEDVEEELKKLQERLAELVIKEDGEAEMGDTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E S +N +GS + E L G+KTGD+KEIE FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGSAENYSLELGSGNFIPGFEEQLAGVKTGDEKEIEVTFPEEYHASELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K + E+ + ++++ A E+ A++ + +K+ E + V+
Sbjct: 232 KATFKVKVHEIKAKHLPELDDEFAQDADDEVETLDALKEKIQKDLKESKEHAAKHAVEDA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
+++ + D+PE+++ E N +LQ+ +S+ + +E
Sbjct: 292 VVEKAAENAEMDIPEAMINTELNRMLQEFEQNLSAQGLNLELYYQFSGQNEEALRNQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I N+EV++EE+ L + + + +
Sbjct: 352 DAEKRVRFNLTLEAIANAENLEVSDEEVDEELKRMSEMYGMSVDDIRRVLGSTDG----I 407
Query: 413 RAPIFEDKVIDHILKSVQ 430
+A + K ID ++++ +
Sbjct: 408 KADLKARKAIDFLVQNSK 425
>gi|296877381|ref|ZP_06901420.1| trigger factor [Streptococcus parasanguinis ATCC 15912]
gi|296431620|gb|EFH17428.1| trigger factor [Streptococcus parasanguinis ATCC 15912]
Length = 460
Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats.
Identities = 82/441 (18%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L I ++ + + E ++ N+ GFR G +P +G+
Sbjct: 34 MSVSFENKETNHGVLTFTISQEQIKPALDRVFESVKKTLNVPGFRKGHIPRPIFNQRFGE 93
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +++++ + + +P+ + E D L +
Sbjct: 94 EALYQDALNDLLPAAYEAAVKEAGIEVVAQPTFDVVSM---------EKGQDWTLTAAVV 144
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+V+ + EV + ++D ++ N VKE + GD V +D+
Sbjct: 145 TKPEVKLGAYKDLEVSVEVSKEVTDADVDARIERERNNLAELVVKEGAAAEGDTVVIDFV 204
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + N +GS + LVG G+ ++ FPED+ DLAGK
Sbjct: 205 GSIDGVEFDGGKGDNFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAADLAGK 264
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E V+
Sbjct: 265 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLAELKEKYRKELAAAKEEAYNDAVEAA 324
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+D D+PE ++ E + + + M + E+ + Y
Sbjct: 325 AIDLAVENAEIVDLPEEMIHEEVHRSINEFLGNMQRQGISPEMYFQITGTTQEDLHKQYE 384
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E TEEE+ + + Q + +++ + P
Sbjct: 385 AEAESRTKTNLVVEAVAKAEGFEATEEEINAEIEQLAADYNMPVEQVRNLL--SPEM--- 439
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 440 LKHDITVKKAVNVITSTAKVK 460
>gi|255102473|ref|ZP_05331450.1| trigger factor [Clostridium difficile QCD-63q42]
Length = 428
Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats.
Identities = 95/438 (21%), Positives = 201/438 (45%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ EG K L + + +N+ + N+ R+K NI GFR GK P I++ YGK
Sbjct: 1 MKAELIKKEGNKVTLKITVDNNKFEAAVNKAYNKSRNKYNIPGFRKGKAPRIVIETQYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I ++ I+ + E+ PE + + D P + I E D L + L+ +
Sbjct: 61 GIFYNDAIEILFPEVYPEAIKELDIDPIDNPDLDIEEISKD---------NGLVMVLNVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYT 178
+ P+ E+ ++ +++ + V ++ +D ++ E+ + N E ++ E GD +D+
Sbjct: 112 VKPEFELGNYKGIEIAKVENTVSDENVDAKLQEMVEKNARLVSVEDKALEDGDTAIIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ V + +N ++GS E LVG K G++ E+ FPE++ +DLAGK
Sbjct: 172 GFENGVAFDGGKGENYNLVIGSNTFIPGFEEQLVGKKAGEEVEVNVTFPEEYHSQDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V N I +V ++++ A F+S ++ +++ ++ + + +
Sbjct: 232 PVVFNVKINDVKVKELSALDDEFAKDTSEFDSLDELKADVRANLEEEAKNRADAETRNSV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
++ ++ ++PE +++++ + +L ++ +++ Q + + EE +
Sbjct: 292 VEKVAENTEIEIPEVMIQHQIDNMLNELNYQLQYQGFGLQQLLEMTGRTMEELREERKED 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
AK+ V + +VL I + IE TEEE ++ L + + +K+ + +++
Sbjct: 352 AKKLVKSSLVLEAITKAEGIEATEEEFKAELEKMASAYNMEVEKIEASLRDAD--KEDIK 409
Query: 414 APIFEDKVIDHILKSVQI 431
I K ID ++ + I
Sbjct: 410 GQIKIRKTIDLLVDNATI 427
>gi|322390942|ref|ZP_08064448.1| trigger factor [Streptococcus parasanguinis ATCC 903]
gi|321142317|gb|EFX37789.1| trigger factor [Streptococcus parasanguinis ATCC 903]
Length = 460
Score = 189 bits (479), Expect = 8e-46, Method: Composition-based stats.
Identities = 82/441 (18%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L I ++ + + E ++ N+ GFR G +P +G+
Sbjct: 34 MSVSFENKETNHGVLTFTISQEQIKPALDRVFESVKKTLNVPGFRKGHIPRPIFNQRFGE 93
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +++++ + + +P+ + E D L +
Sbjct: 94 EALYQDALNDLLPAAYEAAVKEAGIEVVAQPTFDVVSM---------EKGQDWTLTAAVV 144
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+V+ + EV + ++D ++ N VKE + GD V +D+
Sbjct: 145 TKPEVKLGAYKDLEVSVEVSKEVTDADVDARIERERNNLAELVVKEGAAAEGDTVVIDFV 204
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + N +GS + LVG G+ ++ FPED+ DLAGK
Sbjct: 205 GSIDGVEFDGGKGDNFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAADLAGK 264
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ ++ +++ E V+
Sbjct: 265 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLDELKEKYRKELAAAKEEAYNDAVEAA 324
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+D D+PE ++ E + + + M + E+ + Y
Sbjct: 325 AIDLAVENAEIVDLPEEMIHEEVHRSINEFLGNMQRQGISPEMYFQITGTTQEDLHKQYE 384
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E TEEE+ + + Q + +++ + P
Sbjct: 385 AEAESRTKTNLVVEAVAKAEGFEATEEEINAEIEQLAADYNMPVEQVRNLL--SPEM--- 439
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 440 LKHDITVKKAVNVITSTAKVK 460
>gi|317050716|ref|YP_004111832.1| trigger factor [Desulfurispirillum indicum S5]
gi|316945800|gb|ADU65276.1| trigger factor [Desulfurispirillum indicum S5]
Length = 443
Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats.
Identities = 107/454 (23%), Positives = 208/454 (45%), Gaps = 15/454 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K E +E+ V IP + D+ I+ I KA I+GFRPGK PL+ ++ YG
Sbjct: 1 MKVELKNLEKSAKEVTVTIPGKVMDDALESEIKKIAKKAKIRGFRPGKAPLAVVRQEYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + +I++ V L D RP +T + D DL L+ + D
Sbjct: 61 NAYNLASERVIQDAVTSSLQSEDISYVSRPEVTDLQRNED---------NDLVLKYTVDT 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + ++ ++ EV +K+++ + I + F + E+ GD+V +D+
Sbjct: 112 FPEVTPEIYKGFELERERYEVTDKDVEEAIGRILEQRAEFSAVQREARTGDEVVIDFKGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + + ++GS L G+ G +K I+ FP+D+ + L GK
Sbjct: 172 IDGEYFEGGTAERFKLVLGSGQFIPGFEPQLEGMTIGQEKVIDVSFPDDYHAESLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR----LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + V+ ++LA R L + I+++ + ++K + Q
Sbjct: 232 QFEVTLHEVNEKVTPVLTDELAKEVSRDREVAGADEFRQLIRKDIEEYMDSESKRKFREQ 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I + + FDVPES+++++ I + + + Q E Y +A++
Sbjct: 292 IAQKLMDSNAFDVPESMIQDQARRIAGNILMQYVQSIPDEQTFRQQMERLAPAYSDMAEK 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V T ++L + + +I+ +EE+M+ A+ ++ R + AL ++A I
Sbjct: 352 QVRTSVLLHAVAKLESIDASEEDMEKAIAEEATRAQASVEDTRKRL--NAQALESIKANI 409
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
EDKV+D I + + ++ VT + L E +
Sbjct: 410 IEDKVVDFIGANSSVTEKTVTKEDLERQREEVNA 443
>gi|295395012|ref|ZP_06805224.1| trigger factor [Brevibacterium mcbrellneri ATCC 49030]
gi|294972171|gb|EFG48034.1| trigger factor [Brevibacterium mcbrellneri ATCC 49030]
Length = 460
Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats.
Identities = 85/437 (19%), Positives = 183/437 (41%), Gaps = 26/437 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + +L V +P L S +E + I + N+ GFR GKVP I G+
Sbjct: 1 MKSSVEKLDPTRVKLSVEVPFAELKPSIDEAYKQIARQINVPGFRRGKVPAKLIDHRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + + + + + +P + + S++ + +LK + D
Sbjct: 61 PVVMQEAVNNSLDDFFRRAVEENNVEPLGQPEVEV----SEVPGLDGKDEGELKFTVEVD 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+P++E+ + D+ V + EV E++++ ++ + + +E D VT+D
Sbjct: 117 CVPEVELPEYSDISVEVEPFEVTEEDVEAELDALRSRFGTLIAVDRPAENDDFVTLDLVA 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
V+ ++ S +V + VGS + E L GL G++ E + + AGK
Sbjct: 177 LVEEEEVD--SATDVSYQVGSGTMLKGMDEALDGLSEGEETSFE----TQLAGGEHAGKD 230
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V ++D A + F++ +R + K++ E + ++L
Sbjct: 231 ALVKLTLKSVKERELAEADDDFAQMASEFDTIEELREDLKETAKRNKELEQGVAARDKVL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + K VP LVE E N L+ + D+E + +R +
Sbjct: 291 EALLEKVDVPVPAKLVEAEVNRHLENENR-------------TDDDEHRKEVTEETERTL 337
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T +L I + +IEV+++E+ + ++ + + + L+A +
Sbjct: 338 RTQFILDAIVKVESIEVSQQELIEYIMTASQQYGMSPQDFMQALGS-QGQVMALQADVAR 396
Query: 419 DKVIDHILKSVQIVDRK 435
K + +L ++VD +
Sbjct: 397 RKGLASVLSEAKVVDTE 413
>gi|311069316|ref|YP_003974239.1| trigger factor [Bacillus atrophaeus 1942]
gi|310869833|gb|ADP33308.1| trigger factor [Bacillus atrophaeus 1942]
Length = 424
Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats.
Identities = 80/436 (18%), Positives = 185/436 (42%), Gaps = 21/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + + ++ + + + +I GFR GK+P + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVEVDAETFKTALDDAFKKVVKQVSIPGFRKGKIPRGLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ P+ + + RP I + + IE L
Sbjct: 61 EALYQDALDILLPVEYPKAIEEAGIEPVDRPEIDVEK---------IEKGESLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L V +D V ++++ ++ + + +E E G+ V +D+
Sbjct: 112 VKPEVKLGDYKGLNVEKDETAVTDEDVQNELKALQERQAELVVKEEGTVEEGNTVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N VGS E L GL+ G +K++E FPE++ +DLAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEVGSGSFIPGFEEQLTGLEAGAEKDVEVTFPEEYHAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I E+ + ++++ A E+ + + +++++ E K++ +
Sbjct: 232 PAVFKVKIHEIKAKELPELDDEFAKDVDEEVETLAELTEKTKKRLEEAKENEADAKLREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ S DVP+++++ E + ++++ + + + +
Sbjct: 292 LVLKASENAEADVPQAMIDTELDRMMKEFEQRLQMQGMNLELYTQFSGQDENALKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A +RV + + L I + N+EVT+EE+ + L + + + + +
Sbjct: 352 DAAKRVKSNLTLEAIAQAENLEVTDEEVDAELTKMAEAYNMPVENIKQAIGST----DAM 407
Query: 413 RAPIFEDKVIDHILKS 428
+ + K ID ++++
Sbjct: 408 KEDLKVRKAIDFLVEN 423
>gi|262198157|ref|YP_003269366.1| trigger factor [Haliangium ochraceum DSM 14365]
gi|262081504|gb|ACY17473.1| trigger factor [Haliangium ochraceum DSM 14365]
Length = 448
Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats.
Identities = 80/469 (17%), Positives = 184/469 (39%), Gaps = 25/469 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++++L V +P + + ++ + IKGFR GKVP+S +K +YGK
Sbjct: 1 MQVRIEDVSPVEKKLIVEVPWDTVNGKLSDMYRKLSRSVQIKGFRKGKVPMSVVKQMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ SE +++++E E S + A P + T I ++
Sbjct: 61 HVRSEVTEQLVREGFLEATSGHELAAVSEPRVE--------TLSEIRSGEPFSFEAVVEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
++E + + +T+ V+++EI Q+ ++ + N + E + ++
Sbjct: 113 RGEVEAKDYKGMALTRRPLVVEDEEIATQLEQLRQENAELQPIEGRERTAKSDVLTMSLE 172
Query: 181 -VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG-DQKEIERFFPEDHSIKDLAGK 238
+Q + +V + + L L ++E PED + +AG+
Sbjct: 173 GTIGEQPVNQPQIHVDLGDAEHEPLPGMIDALTDLPLDAKDHKLELTIPEDFQEQSVAGQ 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+I + +++D A ES +R I++ + + +++K+
Sbjct: 233 AASFTITITDARVKTLPELDDDFAKDLERGESLDELRQSIRADIEKQRQSQIDRELKQSA 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + + V +LV+ +Q++ M DE + A
Sbjct: 293 IKELVKRNEIPVAPTLVDRGVEFQMQRLAGMMGMPPGSDPRQLLTDE-MREQMRPSALEE 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ ++L I ++ +IE+++E++ + L + R ++ +++ L +R +
Sbjct: 352 IRGQLLLEAIADQESIEISDEDLDAHLSEIAERRNEPVARLRAQYERD-GKLDSIRYQLR 410
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
+DK +D I++ ++ + +E PE D + +
Sbjct: 411 QDKALDLIVEHAEVTE------------AEPEPEPADDAADAESGSDDQ 447
>gi|260101781|ref|ZP_05752018.1| trigger factor [Lactobacillus helveticus DSM 20075]
gi|260084425|gb|EEW68545.1| trigger factor [Lactobacillus helveticus DSM 20075]
gi|328468549|gb|EGF39551.1| trigger factor [Lactobacillus helveticus MTCC 5463]
Length = 443
Score = 189 bits (479), Expect = 9e-46, Method: Composition-based stats.
Identities = 84/459 (18%), Positives = 187/459 (40%), Gaps = 26/459 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K + EL I + + ++ ++ ++ GFR G V YG+
Sbjct: 1 MSVKWKKTGKTTGELTFDISKDEIKLGLDQAFRRVKKNLHVPGFRKGHVSRVIFDQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + A +P I ++ D ++ +
Sbjct: 61 EALYEDALNIVLPNAYSAAVKEAGIAAVGQPQIVPVS---------LDKDKDWTMKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V +K++D ++ + + N +K+ +S GD VT+DY
Sbjct: 112 VEPEVKLGDYKGIEVPKQNTRVYQKDVDAELDKRREQNAELVLKKGKSAKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D E S +N +GS + L+G + GD ++ FP+D+ KDLAGK+
Sbjct: 172 TIDGKEFEGGSAENYSLELGSGAFIPGFEDQLIGHEAGDDVDVVVTFPKDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ++ ++ ++++ E ++
Sbjct: 232 AHFATKIHEVKSKQLPKLDDEFAKDVDDSVDTLDELKDKIKKQLRDQKEQAANDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++ T ++P+++++++ + L + M Q +++ +
Sbjct: 292 IEGAVKNATVDEIPDAMIQDDVDTQLNQYLGNMQRQGIDPQTYYKLTNTNEQQLRSQFAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I EK ++ T+EE+ + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVEKEGLKATKEEIDKEIKDLAAEYNMDEKTIRNTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
I K +D + +V ++V +L +E E
Sbjct: 407 SHDITVRKAMDLVTDNV----KQVAKAKLEAKEAEDKKE 441
>gi|325106886|ref|YP_004267954.1| Trigger factor [Planctomyces brasiliensis DSM 5305]
gi|324967154|gb|ADY57932.1| Trigger factor [Planctomyces brasiliensis DSM 5305]
Length = 497
Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats.
Identities = 82/472 (17%), Positives = 189/472 (40%), Gaps = 13/472 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
V K K+ + V + + + N+ I D+ + + GFR GKVP + + K
Sbjct: 33 NVDIKDVGPCKKHISVTVSAGDIEQLRNDTISDLSRETAVPGFRAGKVPERLLAKRFRKE 92
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I + +I+ + + ++ + P + D+ + + D + ++
Sbjct: 93 IADQLKQKILLQSLEQVSEENGLDPINEPEL-------DVENLEVPEDGDFEYEFEVEVR 145
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P E+ + + + + I E+ + ++ + + +E GD V + +
Sbjct: 146 PTFELPDYSGITIRRPIREISDDDVTQARERFLSQYAQVAPYDGAAESGDYVVCNLEFTH 205
Query: 182 DNVILEDQSKKNVQFIVGS---ADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ ++ + + ++ ++L G K D++E E ++ + ++ +
Sbjct: 206 NGEVIREMEEVTLRLRPTLRFWDAEVVGFDKLLDGAKPDDERETEVAISKEATDVEMRAE 265
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
KV++ F + +V ++ + R+G E+ + + + + + + RQK + Q+L
Sbjct: 266 KVQIKFKVLDVKRVELPELDEAMLGRIGAETVDQLNEMLKESLDRQVSYEQRQKTREQVL 325
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ I+ +D+PE LV + L++ EM A Q + + + + Q ++ +
Sbjct: 326 EKITESANWDLPEGLVRKHVDNALRREILEMQQAGFSRQQIMARESQIRQQSLSTTQQAL 385
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
VL I +IE T +++ + +Y + + +K+ K + L A I E
Sbjct: 386 KEHFVLDKIATVEDIECTGDDIATEIYYMAMQQGENPRKLRSRLVKN-GMIENLEAQIRE 444
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
K +D IL D ++ + L +S E+ + E EE+
Sbjct: 445 RKAVDFILSKATFEDVEM--EDLLSDSVETVNRSITSSIQDTEVNADEESAE 494
>gi|167769420|ref|ZP_02441473.1| hypothetical protein ANACOL_00750 [Anaerotruncus colihominis DSM
17241]
gi|167668388|gb|EDS12518.1| hypothetical protein ANACOL_00750 [Anaerotruncus colihominis DSM
17241]
Length = 479
Score = 189 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 82/479 (17%), Positives = 189/479 (39%), Gaps = 26/479 (5%)
Query: 1 MQVI-EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M V K ++ + EL++ + + + + + + N+ GFR GK P I+ LYG
Sbjct: 16 MSVTSMKTNDDKRVELEIKVDAETFEKAVDAAFKRNSKRMNVPGFRRGKAPRKMIERLYG 75
Query: 60 KSI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + E ++ + + ++ R I + + D + +
Sbjct: 76 EGVFYEEAVNNTYPAAYEDAVKEKSIEPVDRADIEVMQVGKD----------GYSFKATV 125
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDY 177
+ P++ I + ++V + + + + E+D +++ + N E ++ GD +D+
Sbjct: 126 TVKPEVSIEGYKGIEVEKKVAQATDAEVDAELSRMQAQNGRVIAVEGRAAQDGDTAVIDF 185
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD E + +GS +VG GD+ E+ FPE++ ++L G
Sbjct: 186 EGFVDGKAFEGGKGEKYPLELGSNSFIEGFEGQVVGHNVGDEFEVNVTFPENYHAEELKG 245
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K + E+ + ++++ A F++ ++ +K ++ + + + +
Sbjct: 246 KPAVFKCKLHELKTKDLPALDDEFAKDVSEFDTLDELKADLKKKAQERHDSRSETETENK 305
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+++ + K T D+P+ + E + ++++ + + S Q E + Y
Sbjct: 306 LMEAVCAKMTVDIPQCMYERRIDEMVREFEYRLQSQGLNLQTYLQYAGMELESFRKTYAA 365
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ +V T + L I E + TEEE+ L + G + +++ ++
Sbjct: 366 QAEAQVKTRLALEKIAELEKLAATEEEINGELLKIAGNYNMDVERVRKIVSP-----EDV 420
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ K +D + S I + K ++ K K +K E + E +E
Sbjct: 421 AHNLAMGKALDLVRDSAVITEVK---EEAAPAEKPKKASKPRAKKAKTEDAPAAETSAE 476
>gi|320354135|ref|YP_004195474.1| trigger factor [Desulfobulbus propionicus DSM 2032]
gi|320122637|gb|ADW18183.1| trigger factor [Desulfobulbus propionicus DSM 2032]
Length = 441
Score = 189 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 77/443 (17%), Positives = 193/443 (43%), Gaps = 14/443 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+++ + L ++L + +P + + + I + +KGFR GK+P S +++ +G
Sbjct: 1 MEIVVEHLSDLTKKLTITLPKETVGPALEKAYAKINKEVKLKGFRRGKIPQSVLENNFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I +E +++++E + + K + P IT DI
Sbjct: 61 QIQAEVGEKLVQESYFDAIEKEKLEPVVHPEIT---------EHNFPEDGTFVYVALVDI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
PQ E+ + L+V + + V ++E++ ++ + ++ + + + D VD+
Sbjct: 112 KPQFELKEYKGLEVEKPVVTVSDEEVENEIKLLQRHQAVLQTAEEGHAIAMDDVAIVDFQ 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ +++ +N +G L + E L+GLK GD+ E FP D+ LAGK
Sbjct: 172 GFHNGKAMKEVRNENFSVDIGMHRLGKDFEEKLLGLKKGDKTLYEITFPADYPNPLLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V +K+V + ++++ A + + ++ ++++ + ++ + +
Sbjct: 232 TVEFKVDVKDVKVRVKPELDDEFAKDIKPELTTLEELKKDIRDRLQKTKDDALKGDLDDK 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I+ + + F+VP+ LV E +L++ + + ++ EE ++ +A +
Sbjct: 292 IMHKLIDLNPFEVPQRLVNYEIQEMLKQTEENLKRSGLSFESAGINLEELVEKNKEVAVK 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV +L I E I++ +E++Q + ++ ++ +F++ L +
Sbjct: 352 RVKGDFLLKKIAEIEEIKIADEDIQRGYQRIADQYRMTLDEVKKYFKRREEILP-FMNEL 410
Query: 417 FEDKVIDHILKSVQIVDRKVTFD 439
+K+++ + + + ++ +
Sbjct: 411 HNEKILNFLREQAKFIEVAAATE 433
>gi|229019698|ref|ZP_04176505.1| Trigger factor [Bacillus cereus AH1273]
gi|229025938|ref|ZP_04182329.1| Trigger factor [Bacillus cereus AH1272]
gi|228735361|gb|EEL85965.1| Trigger factor [Bacillus cereus AH1272]
gi|228741605|gb|EEL91798.1| Trigger factor [Bacillus cereus AH1273]
Length = 425
Score = 189 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 82/437 (18%), Positives = 184/437 (42%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MSTKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDEAGIFPVAHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENEVKALQERQAELVVKEEGTIENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+GD K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGDSKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I E+ + +N++ A E + ++ +++ + KV+ +
Sbjct: 232 PATFKVTIHEIKTKELPELNDEFAKDADEEVATLDELKTKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + D+PE++++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++ +
Sbjct: 408 SEDLKVRKAVDFLVDNA 424
>gi|114777031|ref|ZP_01452051.1| peptidyl-prolyl cis-trans isomerase trigger factor [Mariprofundus
ferrooxydans PV-1]
gi|114552552|gb|EAU55012.1| peptidyl-prolyl cis-trans isomerase trigger factor [Mariprofundus
ferrooxydans PV-1]
Length = 442
Score = 189 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 81/431 (18%), Positives = 174/431 (40%), Gaps = 11/431 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
Q K + ++ V + + + + +A + GFRPGK P +K +G
Sbjct: 3 QTEVKTLAPNEYQVHVTVEQGEYDRIYAMLVNKLSMQAKLPGFRPGKTPSHVLKKQFGPK 62
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ +T+ E+I+ + K A++P + + + + + +
Sbjct: 63 LHEDTVSELIQTHYVTAIEKSGLIPAVQPLLDVP---------AAQPSSGFEFTMKVTTW 113
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYTVS 180
P +EI L + V++ ++ + + K+ V FE +E GD++ +D+ S
Sbjct: 114 PDVEIKPLSGLAFDETTVSVEDADVQAVIDRLQKSQVKFEIEAGRAAETGDQLHIDFCGS 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E ++V ++G + L+G GD IE FP D+ LA K
Sbjct: 174 IDGEEFEGGKGEDVPLVLGEGRFIPGFEDQLLGKVAGDDVTIEVTFPADYQAAHLADKAA 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++K V P+ + LAV LGFE +A+R +++ + + LD
Sbjct: 234 SFATTVKSVGKPVVAEDEDALAVMLGFEDAAALRADAVARLQDEANEASFSSTRESALDA 293
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ +PE+L+E + ++V M + ++E ++R +
Sbjct: 294 LLAANDMVLPEALIEEDMRATTRRVLENMKQQGMQPDPAMLDNDEFRTEIRTRSERGLKL 353
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEK-KMLDHFQKYPNALAELRAPIFED 419
++L + ++ V+E E+++ + +Q ++P ++ + + +R + E
Sbjct: 354 SVLLQKVRADADLNVSEAEIEAEIDRQSLQYPEEQRVQFKAWVHGQDEQMGAIRERLLER 413
Query: 420 KVIDHILKSVQ 430
+ HI+ +
Sbjct: 414 ACVQHIIDQAK 424
>gi|254432219|ref|ZP_05045922.1| trigger factor [Cyanobium sp. PCC 7001]
gi|197626672|gb|EDY39231.1| trigger factor [Cyanobium sp. PCC 7001]
Length = 504
Score = 189 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 70/460 (15%), Positives = 178/460 (38%), Gaps = 18/460 (3%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-S 61
V G + L+V I R S++ +E + + GFR GKVP + G
Sbjct: 30 VKASPRPGSRMALEVAISGARSQASYDAALEKLSRSVKLPGFRKGKVPRPVLLQQIGPLR 89
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + ++E++ + L+ + RP + + + DL L D+
Sbjct: 90 LRATALEELVDAAFRDALALEEVAPIGRPEL---SEAFEAVLERFQPGTDLSFTLELDVE 146
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDYT 178
P + LQ + D +D + + K E + S + T
Sbjct: 147 PTPSLKKTRGLQAEAEAIRYDPARVDELIEQSRKQLATLVPVEDRSAASGDVAVLAFSGT 206
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + S + + + + E ++G+ G+ + ++ FPE + +D AG+
Sbjct: 207 FTDTGEAISGGSSEATEVELEEGRMIPGFVEGVIGMAVGESRSVDCQFPESYPQEDAAGR 266
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
R S+K++ + +++ A + + + + +R ++K+ +E R +
Sbjct: 267 PARFEISLKDLKTRELPALDDAFAQQASDKQTLAELRADLETRLKEDAERRARAARHEAL 326
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLAK 355
L+ + + ++PE+LV+ E ++++ +++ + + + D + A+
Sbjct: 327 LNALVAELEVELPETLVQQEIRNLIEQTAGQIAQQGMDVKKLFTPDLVRSLMDTSRPEAE 386
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA- 414
+R+ + L + + I + + E+++ + + PN L ++ A
Sbjct: 387 QRLRRSLALQALAKAEAIALEDGEIEAKVKEISRGLSQQGNI-------DPNRLRQVVAD 439
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLL 454
+ ++K++D + + I ++ + + + + +
Sbjct: 440 DLLQEKLLDWLEGNSSITEKAPEAESAAASDKDDAQGQAT 479
>gi|301055980|ref|YP_003794191.1| trigger factor [Bacillus anthracis CI]
gi|300378149|gb|ADK07053.1| trigger factor [Bacillus cereus biovar anthracis str. CI]
Length = 425
Score = 189 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 80/437 (18%), Positives = 184/437 (42%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MAAKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDEAGIFPVAHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKSLQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+GD K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGDSKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ E+ + +N++ A + ++ +++ + KV+ +
Sbjct: 232 PATFKVTVHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + D+PE++++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++++
Sbjct: 408 AEDLKVRKAVDFLVENA 424
>gi|323484461|ref|ZP_08089827.1| trigger factor [Clostridium symbiosum WAL-14163]
gi|323692477|ref|ZP_08106711.1| trigger factor [Clostridium symbiosum WAL-14673]
gi|323402239|gb|EGA94571.1| trigger factor [Clostridium symbiosum WAL-14163]
gi|323503474|gb|EGB19302.1| trigger factor [Clostridium symbiosum WAL-14673]
Length = 428
Score = 189 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 81/439 (18%), Positives = 181/439 (41%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + +P+ + + K NI GFR GK P + I+ +YG
Sbjct: 1 MSLQVEKLENNMAKLTIEVPAEEFDAAIKTAYNHNKGKFNIPGFRKGKAPQAMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I E + +I P+ + + P I + + IE +
Sbjct: 61 GIFYEEAANAVIDASYPKAAEECENEIVSSPEIDVTQ---------IEKGKAFIYTATVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
I P++ + + ++V + EV + ++D ++ N V++ GD +D+
Sbjct: 112 IKPEVTLGEYKGVEVEKVSAEVADSDVDAELEAARHKNGRLITVEDRPVADGDNTVIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + + +GS E L+G GD+ EIE FPE++ +LAGK
Sbjct: 172 GFIDGKAFDGGEGIDYPLTIGSHSFIDTFEEQLIGKNLGDKCEIEVTFPEEYHAPELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +IKE+ +N++ A FE+ + + K++ + + ++
Sbjct: 232 PAKFEVTIKEIKMTELPELNDEFASEVSDFETLAEYKDDIRAKLQDKKNREAATENENRV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+D + D+P+++++ + G+++ + S + ++ ++
Sbjct: 292 IDKVVENAQMDIPQAMIDTQARGMVEDYARRLQSQGLNINDYMKYTGMTADKLMEQMAPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I E NI+VT+E + + + + +K+ + + +++
Sbjct: 352 ALKRIKTRLVLEKIVELENIQVTDEAVYQQIGKMATSYQMEAEKLNELLGEKE--KEQIK 409
Query: 414 APIFEDKVIDHILKSVQIV 432
+ + +D ++ ++V
Sbjct: 410 EDLKVQEAVDLLVSEAKLV 428
>gi|206975976|ref|ZP_03236886.1| trigger factor [Bacillus cereus H3081.97]
gi|206745728|gb|EDZ57125.1| trigger factor [Bacillus cereus H3081.97]
Length = 425
Score = 189 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 80/437 (18%), Positives = 184/437 (42%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MAAKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDEAGIFPVAHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKSLQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E L+GLK+G+ K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQLIGLKSGESKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ E+ + +N++ A + ++ +++ + KV+ +
Sbjct: 232 PATFKVTVHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + D+PE++++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAKMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++++
Sbjct: 408 AEDLKVRKAVDFLVENA 424
>gi|94676626|ref|YP_588716.1| trigger factor [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|118574060|sp|Q1LTJ8|TIG_BAUCH RecName: Full=Trigger factor; Short=TF
gi|94219776|gb|ABF13935.1| trigger factor [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 436
Score = 189 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 88/448 (19%), Positives = 208/448 (46%), Gaps = 20/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ++ S+ L+R + + I S+ + ++ ++++ ++ I GFR GK P+ + Y
Sbjct: 1 MQILVDHSQKLRRSVTMKIASHIIEETISKKLLELAKTVVIDGFRKGKAPIHIVAKRYHN 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + +++ + + K P+ T + + D DL ++ ++I
Sbjct: 61 YLCQDVLYQLMHQQFIAAMLKEKINVISTPNYTYSTYQKD---------KDLIYQVEFEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
PQ+E+ D + V + + ++ E +ID + ++ K N ++E ++I D+VT+D +
Sbjct: 112 SPQVELKGIDTITVEKPLVQIKETDIDAMLTQLIKQNGSWEKTNNAAKITDRVTIDLYGT 171
Query: 181 VDNVILEDQSKKNVQFIVG--SADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++N L+ KN+ F +G + + ++G K GD I + P+++ +L GK
Sbjct: 172 IENKRLKGSQAKNLNFTIGINNKHIIPGLENGIIGHKAGDNFNINIYLPDEYFPLELRGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K+V ++ LG + +R + I+ + VR +K Q
Sbjct: 232 LAIFTVALKKVEQYRLPHLDESFIKLLGVVDGTVEGLRNKIRKDIEVLLKNAVRNYIKEQ 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+++Y+ + DVP+ ++E E I Q + + S E+ + AKR
Sbjct: 292 VINYLLSVNNIDVPDIMIEQEIQIIKQ------KNTKHIGRIRKSALEQSRELIEAQAKR 345
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R+ ++L I ++++I+V M++ + + P ++++++ + + ++ +
Sbjct: 346 RIQITLLLIEIIKQHDIKVNTARMRAIMEEMAYLSP-QKQEIINSYNSQSSMRRQISNIV 404
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDN 444
E++ I+ +L ++++K+ F
Sbjct: 405 LEEQAIEALLMKANVIEKKIDFADFMSK 432
>gi|291548435|emb|CBL21543.1| trigger factor [Ruminococcus sp. SR1/5]
Length = 428
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 85/436 (19%), Positives = 184/436 (42%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + L + + + + +I GFR GK P I+ +YGK
Sbjct: 1 MSLQVEKMEKNMAKLTIEVSAEDLDKAMQNAYQKAKGRISIPGFRKGKAPRKMIEQMYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ L + + +I E + L++ D +P I + + +E
Sbjct: 61 GVFLEDAANALIPEHYSKALAECDLEIVSQPKIDVTQ---------VEPGKPFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
P++ + + L+V + EV ++E++ ++ + + N V++ ++ GD T+D+
Sbjct: 112 TKPEVTLGDYKGLEVPKSETEVTDEEVEAELKKEQEKNSRTITVEDRAAQNGDTATIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +GS E LVG TGD E++ FPE++ K+LAGK
Sbjct: 172 GFVDGEAFEGGKGTDYPLTLGSNTFIPGFEEQLVGANTGDHVEVKVTFPEEYQAKELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +K++ + +++D A F++ + + + + + R+ +
Sbjct: 232 EAVFQCDVKKIEAKELPELDDDFAKDVSEFDTLAEYKEDVKKNLTEKKAEDARRAKEDAA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+D + D+PE+++E + +L M S + ++ ++
Sbjct: 292 VDKVIENAQMDIPEAMIETQTRQMLDDFARRMQSQGLSMEQYFQFTGQSVDKMMEDMKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I E NI+ TEEE+ + + + K+ D + + +++
Sbjct: 352 ALKRIQTRLVLEKIAEVENIQPTEEEVNEEISKMAEMYKMEADKLKDLIGENE--MEQMK 409
Query: 414 APIFEDKVIDHILKSV 429
+ K + + +
Sbjct: 410 KDMAVQKAVTLVADAA 425
>gi|126700925|ref|YP_001089822.1| trigger factor [Clostridium difficile 630]
gi|254976905|ref|ZP_05273377.1| trigger factor [Clostridium difficile QCD-66c26]
gi|255094291|ref|ZP_05323769.1| trigger factor [Clostridium difficile CIP 107932]
gi|255308378|ref|ZP_05352549.1| trigger factor [Clostridium difficile ATCC 43255]
gi|255316045|ref|ZP_05357628.1| trigger factor [Clostridium difficile QCD-76w55]
gi|255518702|ref|ZP_05386378.1| trigger factor [Clostridium difficile QCD-97b34]
gi|255651824|ref|ZP_05398726.1| trigger factor [Clostridium difficile QCD-37x79]
gi|296451895|ref|ZP_06893612.1| trigger factor [Clostridium difficile NAP08]
gi|296879710|ref|ZP_06903685.1| trigger factor [Clostridium difficile NAP07]
gi|306521611|ref|ZP_07407958.1| trigger factor [Clostridium difficile QCD-32g58]
gi|118574065|sp|Q180E9|TIG_CLOD6 RecName: Full=Trigger factor; Short=TF
gi|115252362|emb|CAJ70203.1| Trigger factor (TF) [Clostridium difficile]
gi|296259277|gb|EFH06155.1| trigger factor [Clostridium difficile NAP08]
gi|296429299|gb|EFH15171.1| trigger factor [Clostridium difficile NAP07]
Length = 428
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 96/438 (21%), Positives = 202/438 (46%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ EG K L + + +N+ + N+ R+K NI GFR GK P I++ YGK
Sbjct: 1 MKAELIKKEGNKVTLKITVDNNKFEAAVNKAYNKSRNKYNIPGFRKGKAPRIVIETQYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I ++ I+ + E+ PE + + D P + I E D L + L+ +
Sbjct: 61 GIFYNDAIEILFPEVYPEAIKELDIDPIDNPDLDIEEISKD---------NGLVMVLNVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYT 178
+ P+ E+ ++ +++ + V ++ +D ++ E+ + N E ++ E GD +D+
Sbjct: 112 VKPEFELGNYKGIEIAKVENTVSDENVDAKLQEMVEKNARLVSVEDKALEDGDTAIIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ V + +N ++GS E LVG K G++ E+ FPE++ +DLAGK
Sbjct: 172 GFENGVAFDGGKGENYNLVIGSNTFIPGFEEQLVGKKAGEEVEVNVTFPEEYHSQDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V N I +V ++++ A F+S ++ K+++ ++ + + +
Sbjct: 232 PVVFNVKINDVKVKELSALDDEFAKDTSEFDSLDELKADVRAKLEEEAKNRADAETRNSV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
++ ++ ++PE +++++ + +L ++ +++ Q + + EE +
Sbjct: 292 VEKVAENTEIEIPEVMIQHQIDNMLNELNYQLQYQGFGLQQLLEMTGRTMEELREERKED 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
AK+ V + +VL I + IE TEEE ++ L + + +K+ + +++
Sbjct: 352 AKKLVKSSLVLEAITKAEGIEATEEEFKAELEKMASAYNMEVEKIEASLRDAD--KEDIK 409
Query: 414 APIFEDKVIDHILKSVQI 431
I K ID ++ + I
Sbjct: 410 GQIKIRKTIDLLVDNATI 427
>gi|327183367|gb|AEA31814.1| trigger factor [Lactobacillus amylovorus GRL 1118]
Length = 443
Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats.
Identities = 81/460 (17%), Positives = 185/460 (40%), Gaps = 26/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + EL I + + ++ ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTTGELTFDISQDEIKLGLDQAFRRVKKNLRVPGFRKGHVSRVIFDQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + A +P IT + D ++ +
Sbjct: 61 EALYEDALNIVLPNAYSAAVKEAGIAAVGQPQITPVSM---------DKGKDWTMKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + + +K++D ++ + + N +K+ +SE GD VT+DY
Sbjct: 112 VEPEVKLGDYKGIEVPKQNTRIYQKDVDAELDKRREQNAELVLKKGKSEKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D E S +N +GS + L+G + GD ++ FP+D+ KDLAGK+
Sbjct: 172 TIDGKEFEGGSAENYSLELGSGAFIPGFEDQLIGHEAGDDVDVVVTFPKDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ++ ++ + +K E + ++
Sbjct: 232 AHFATKIHEVKSKQLPKLDDEFAKDVDDSVDTLDELKDKIKKDLKAQKEEAAKDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++ T ++P+++++ + + L + M Q +++ +
Sbjct: 292 IEGAVKNATVDEIPDAMIQEDVDTQLNQYLGNMQRQGIDPQTYYKLTNTNEQQLRSQFAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I + +++ T++E+ + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVDAEDLKATKDEIDKEIKDLSSEYNMDEKTVRNTLTDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
I K +D I + ++V +L + + E
Sbjct: 407 SHDITVRKAMDLITDNA----KQVAKAKLEAKDLDDNKED 442
>gi|217961965|ref|YP_002340535.1| trigger factor [Bacillus cereus AH187]
gi|222097919|ref|YP_002531976.1| trigger factor [Bacillus cereus Q1]
gi|229141214|ref|ZP_04269753.1| Trigger factor [Bacillus cereus BDRD-ST26]
gi|229198602|ref|ZP_04325304.1| Trigger factor [Bacillus cereus m1293]
gi|226703995|sp|B7HQN3|TIG_BACC7 RecName: Full=Trigger factor; Short=TF
gi|254788986|sp|B9IZ48|TIG_BACCQ RecName: Full=Trigger factor; Short=TF
gi|217065433|gb|ACJ79683.1| trigger factor [Bacillus cereus AH187]
gi|221241977|gb|ACM14687.1| trigger factor [Bacillus cereus Q1]
gi|228584884|gb|EEK43000.1| Trigger factor [Bacillus cereus m1293]
gi|228642255|gb|EEK98547.1| Trigger factor [Bacillus cereus BDRD-ST26]
gi|324328377|gb|ADY23637.1| trigger factor [Bacillus thuringiensis serovar finitimus YBT-020]
Length = 425
Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats.
Identities = 80/437 (18%), Positives = 184/437 (42%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MAAKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDEAGIFPVAHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKSLQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E L+GLK+G+ K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQLIGLKSGESKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ E+ + +N++ A + ++ +++ + KV+ +
Sbjct: 232 PATFKVTVHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + D+PE++++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++++
Sbjct: 408 AEDLKVRKAVDFLVENA 424
>gi|169831636|ref|YP_001717618.1| trigger factor [Candidatus Desulforudis audaxviator MP104C]
gi|238688339|sp|B1I4R5|TIG_DESAP RecName: Full=Trigger factor; Short=TF
gi|169638480|gb|ACA59986.1| trigger factor [Candidatus Desulforudis audaxviator MP104C]
Length = 438
Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats.
Identities = 90/447 (20%), Positives = 199/447 (44%), Gaps = 17/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + EL V + RL + N+ + KANI GFRPGK P + YGK
Sbjct: 1 MKASAEKIDKNRVELQVEVEPERLDEVLNQAYRKLVRKANIPGFRPGKAPRPVFERFYGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++++I E ++ + +P + + + +E + L++ D
Sbjct: 61 QSLYEEAMEQLIPRAYLEAVADTGIQPVSQPEVDVVQ---------LEEGKPVILKIQVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++ + + +L+V + + EV + E+D ++ ++ E + D +T+DY
Sbjct: 112 VKPEVVLGEYKNLKVERQVAEVSDSEVDEELEKLRNRYAKLVTIEEGTVEMGDIITIDYE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+++ S + VG + + LVG+ TG+ +EI PED K++AGK
Sbjct: 172 GTINGEPFAGGSATDRSVEVGKGFVAKDFDAHLVGMSTGETREIPLSIPEDFPNKEVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + ++KE+ ++++ A ++ A+R +K++ +E + ++ +
Sbjct: 232 EALITVTVKEIKRKELADLDDEFAKDVSEHDTLEALRAETRKKLENAAEKKIEYVMRNAL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN----VDSIDEEDLQYYHML 353
+ +VP S+V+ ++++V + ++ + +E
Sbjct: 292 ISEAVAGAEVEVPASMVDARLETMMEEVLRPVIEQGMTKEDFFKLTNQTEESMRADIRPR 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ + +V+ I E +E TEEE+ + L + + ++ + + N L +R
Sbjct: 352 AEESLKKELVIDRIAEVEGLEATEEEVDAELAKMAEFYRLEADRLRE-ILEQRNDLDSIR 410
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQ 440
I DK +D ++ + +IV ++ T +
Sbjct: 411 TAIKRDKAVDLLVANAEIVGQESTEAE 437
>gi|313638157|gb|EFS03413.1| trigger factor [Listeria seeligeri FSL S4-171]
Length = 427
Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats.
Identities = 88/437 (20%), Positives = 178/437 (40%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG +L I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + P + I E L
Sbjct: 61 EALYQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESM---------EKGETWVLTADVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV-DYT 178
+ P++++ + L+V + E+ +E++ ++ ++ + VKE + D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRDEELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V + E+ + ++++LA E+ + S ++++ + V Q + +
Sbjct: 232 PVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELXXXISNRLQEAKKDSVAQAKQEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++ D+P ++V +E + ++ ++ + Q +E
Sbjct: 292 VIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMEQ 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIE TEE + + ++ + + ++EL
Sbjct: 352 DAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAAL----GDMSEL 407
Query: 413 RAPIFEDKVIDHILKSV 429
++ + K ID +L S
Sbjct: 408 KSDLKIRKAIDVLLDSA 424
>gi|228967576|ref|ZP_04128602.1| Trigger factor [Bacillus thuringiensis serovar sotto str. T04001]
gi|228792155|gb|EEM39731.1| Trigger factor [Bacillus thuringiensis serovar sotto str. T04001]
Length = 425
Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats.
Identities = 79/437 (18%), Positives = 182/437 (41%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MSTKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIEEAGIFPVDHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V ++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVVNELKSLQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+G+ K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I E+ + +N++ A + ++ +++ + KV+ +
Sbjct: 232 PATFKVTIHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + ++PE+++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIEIPEAMINTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++++
Sbjct: 408 AEDLKVRKAVDFLVENA 424
>gi|312792980|ref|YP_004025903.1| trigger factor [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180120|gb|ADQ40290.1| trigger factor [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 438
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 95/441 (21%), Positives = 196/441 (44%), Gaps = 17/441 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K ++V + + + + + I GFRPGK P S I+ YG+
Sbjct: 1 MEFKIEKKGTNKAIIEVEVEAEKFEEGLQKSYLKNAKYFKIPGFRPGKAPRSLIERAYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ID ++ E P+++ + RP + I + +
Sbjct: 61 EVFYDDAIDYVLNETYPKVIEESKLEVVSRPEVDIVQVG---------KGKSFIYKAEVY 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ + +++ + V E+E++ ++ + + N F E E GD VT+D+
Sbjct: 112 VKPEFELGQYKGIEIKKIEYPVAEEEVEHELEHLREENARFVPVEREVMQGDIVTIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD ++ + ++ + +GS E L+G+ G++KEIE FPED+ LAGKK
Sbjct: 172 FVDGEPIKGGTAQDYELTIGSNSFIPGFEEQLIGMNKGEEKEIEVTFPEDYQEPSLAGKK 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+K++ ++++ A FE+ ++ +IK+ ++ + ++ IL
Sbjct: 232 ATFKVKVKDIKVKELPELDDEFAKDVSEFETLEELKQSIRNRIKEKNDQRAKDEMIDAIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
+ I+ + D+PE ++EN+ N ++ V + Q + D E + A
Sbjct: 292 EKIAQNTSIDIPEPMIENQINYYVEDVARNLQYFGMTYERYLQAIGKTDAEFRSQFRERA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V ++L I + NI+ TEEE+Q L + + K+ + + + ++
Sbjct: 352 EKAVRNNLILEKIAKVENIQATEEELQKELERLAKMYNLEVDKLKERLSEDD--IEYIKE 409
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
I +K ID I ++ +I+ +
Sbjct: 410 GIILNKAIDFIYENAKIISEE 430
>gi|119478157|ref|ZP_01618213.1| trigger factor [marine gamma proteobacterium HTCC2143]
gi|119448666|gb|EAW29910.1| trigger factor [marine gamma proteobacterium HTCC2143]
Length = 327
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 82/335 (24%), Positives = 157/335 (46%), Gaps = 12/335 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + GL+R+L V IP+ R+ N R++ + GFRPGKVP+ +K +G
Sbjct: 1 MQVSIQTTSGLERKLTVGIPAERVDSEVNNRLQKAAGNVKLDGFRPGKVPMKVMKQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E + E++ + E + + + + A P I E DL+ ++++
Sbjct: 61 GIRQEVLQEVMNQSFSEAIVQENLKPAGMPDIEPKNM---------EAGSDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E SF D+ + + + V E +ID + + K +EV + + GDKV +DY +
Sbjct: 112 FPEVEAKSFGDVVIDKPVAIVTEADIDTMIETLRKQQATWEVAKRAAISGDKVNLDYAGT 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D + S + +GS + + +VGLK GD+K + FP+D+ +DL G V
Sbjct: 172 KDGDAFDGGSAEASDLELGSNRMIPGFEDGIVGLKAGDEKVLSLVFPDDYHAEDLKGAAV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ V +N++ + G + R S +++ + + KVK Q++
Sbjct: 232 EFAVKVNAVSEQRLAELNDEFYEKFGVKGSGPEQFRTDVSDNMQRELDKSSKAKVKNQVM 291
Query: 299 DYISNKYTF-DVPESLVENEYNGILQKVRFEMSSA 332
+ + + +P++L++ E + ++ + A
Sbjct: 292 EALVEAHKDLQLPQALIKQEITALKGQMVQQFGGA 326
>gi|255657264|ref|ZP_05402673.1| trigger factor [Clostridium difficile QCD-23m63]
Length = 428
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 96/438 (21%), Positives = 202/438 (46%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ EG K L + + +N+ + N+ R+K NI GFR GK P I++ YGK
Sbjct: 1 MKAELIKKEGNKVTLKITVDNNKFEAAVNKAYNKSRNKYNIPGFRKGKAPRIVIETQYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I ++ I+ + E+ PE + + D P + I E D L + L+ +
Sbjct: 61 GIFYNDAIEILFPEVYPEAIKELDIDPIDNPDLDIEEISKD---------NGLVMVLNVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYT 178
+ P+ E+ ++ +++ + V ++ +D ++ E+ + N E ++ E GD +D+
Sbjct: 112 VKPEFELGNYKGIEIAKVENTVSDENVDAKLQEMVEKNARLVSVEDKALEDGDTAIIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ V + +N ++GS E LVG K G++ E+ FPE++ +DLAGK
Sbjct: 172 GFENGVAFDGGKGENYNLVIGSNTFIPGFEEQLVGKKAGEEVEVNVTFPEEYHSQDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V N I +V ++++ A F+S ++ K+++ ++ + + +
Sbjct: 232 PVVFNVKINDVKVKELSALDDEFAKDTSEFDSLDELKADVRAKLEEEAKNRADAETRNSV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
++ ++ ++PE +++++ + +L ++ +++ Q + + EE +
Sbjct: 292 VEKVAENTEIEIPEVMIQHQIDNMLNELNYQLQYQGFGLQQLLEMTGRTMEELREERKED 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
AK+ V + +VL I + IE TEEE ++ L + + +K+ + +++
Sbjct: 352 AKKLVKSSLVLEAITKVEGIEATEEEFKAELEKMASAYNMEVEKIEASLRDAD--KEDIK 409
Query: 414 APIFEDKVIDHILKSVQI 431
I K ID ++ + I
Sbjct: 410 GQIKIRKTIDLLVDNATI 427
>gi|148238407|ref|YP_001223794.1| trigger factor [Synechococcus sp. WH 7803]
gi|166229949|sp|A5GHT2|TIG_SYNPW RecName: Full=Trigger factor; Short=TF
gi|147846946|emb|CAK22497.1| Trigger factor [Synechococcus sp. WH 7803]
Length = 481
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 78/477 (16%), Positives = 189/477 (39%), Gaps = 18/477 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V G + ++V +P+ R S+ E I + N+ GFR GKVP + + G
Sbjct: 7 KVTTTSRPGSRLAVEVAVPAERSQASYEEAITRLSRSVNLPGFRKGKVPRTVLVQQLGAL 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++ +++ + + L++ A +P + G + + L + + D+
Sbjct: 67 RIRATALESLVESVWRDALAQETIEALGQPEL---SGSFEELLDTFKPGEALTVTMETDV 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVDY 177
P + S L+ + D ++D + + + E V
Sbjct: 124 APSPTLKSTKGLKAEAETVAFDAAKVDEMLEQSRRQLATVVPVEGRKAEQGDIAVVGFKG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T S D +E S ++ + + E +VG+ GD K ++ FPED+ +D G
Sbjct: 184 TYSDDGSEIEGGSADSMDVDLEHGRMIPGFVEGVVGMAVGDSKTVDCTFPEDYPKEDARG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K +K++ + +++ A + E+ + +R Q++K +E R
Sbjct: 244 RKASFAIELKDLKTRELPELDDAFAKQASEQETLAELRSDLEQRLKDDAERRSRSNRHDA 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
+L + + ++PESL++ E ++++ + + Q++ + + ++ A
Sbjct: 304 LLAALVEQLEVELPESLIQQEVRNLVEQTAGQFAQQGMDVQSLFTPELVRNLMESSRPEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE-LR 413
+ R+ + L + E + V + ++ + L + G+ G P L + +
Sbjct: 364 EERLRRSLALTALAESEKLSVDDADLNAKLKEVKGQLSGERDI-------DPERLRQAVL 416
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ ++K++ + ++ + ++ + +S+ + K +K +
Sbjct: 417 DDLLQEKLLGWLEENSTVTEKAPEAESDAAKASKPAAAKKDASKAKTAKTSKAKTAK 473
>gi|239917498|ref|YP_002957056.1| trigger factor [Micrococcus luteus NCTC 2665]
gi|281414012|ref|ZP_06245754.1| trigger factor [Micrococcus luteus NCTC 2665]
gi|239838705|gb|ACS30502.1| trigger factor [Micrococcus luteus NCTC 2665]
Length = 454
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 58/442 (13%), Positives = 160/442 (36%), Gaps = 22/442 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + +L V +P + + ++ +DI ++ I GFR GK+P I+ +G+
Sbjct: 3 KSTAENLSPTRVKLTVEVPFEEVKPALDKAFKDIANQVQIPGFRQGKIPARLIEQRFGRE 62
Query: 62 ILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + ++E + +++ + RP + + T + +D+
Sbjct: 63 VVVDQAVNEGLNTWFSAAIAEAELTPISRPEVDVT-----ATPDAENAEGPVAFTAEFDV 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P IE+ + L+VT + + E++ + + + + + + + D VT++ T +
Sbjct: 118 RPTIELPDYKGLKVTVEPAQATEEDEQKALDALRSRFGSLKDVDRPAAQDDFVTMNLTAT 177
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD ++ + + + VG+ + E L GL G+ E + G+
Sbjct: 178 VDGEQVD--QAEGLSYQVGAGTMLEGIDEALDGLSAGEDATFETTLN----GGEHDGETA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + V +++ A F++ + ++ ++ + + + + ++L+
Sbjct: 232 VVKLELTAVKERELPEADDEFAQLASEFDTIAELKEDLKKQAAEEAVNRQGVEARDKVLE 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
++ VP+ ++ + A + D E +
Sbjct: 292 ELAKLVEVPVPDGVIAEQVEQHFS--------AGGHTAGDDHDTAEHRAELEQNTREAFA 343
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
++L + E + V + E+ + + + + + +
Sbjct: 344 NEVILDEVAEAEEVTVDQGELIEYIIATSSEYGMDPNQF-AMMLDQGGQIPMIMGEVRRR 402
Query: 420 KVIDHILKSVQIVDRKVTFDQL 441
K + +L+ ++ D L
Sbjct: 403 KALAKVLEYAEVTDTDGKAVDL 424
>gi|222151556|ref|YP_002560712.1| FKBP-type peptidyl-prolyl cis-trans isomerase homolog [Macrococcus
caseolyticus JCSC5402]
gi|254789008|sp|B9E748|TIG_MACCJ RecName: Full=Trigger factor; Short=TF
gi|222120681|dbj|BAH18016.1| FKBP-type peptidyl-prolyl cis-trans isomerase homolog [Macrococcus
caseolyticus JCSC5402]
Length = 427
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 85/438 (19%), Positives = 183/438 (41%), Gaps = 21/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V +P+ + ++ + + + N+ GFR GK+P + +G
Sbjct: 1 MSVKWEKQEGNEGVLTVTVPAEEVNAGLDKAFKKVVKQVNVPGFRKGKMPRPMFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D I+ + + + RP I I + E +L
Sbjct: 61 EALYQDALDFILPDAYAAAVEEAGINPVDRPEIDIEQM---------EKGKELIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++E+ + L+V ++ EV E+++++ + +E E GD V +D+
Sbjct: 112 VEPEVELGDYKGLEVEKEDTEVTEEDLNKAIEADLARKAELVVKEEGEVAEGDVVNLDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V+ E + +GS E LVG K GD+K++ FPE++ ++LAGK
Sbjct: 172 GYVNEEAFEGGKAEGYDLEIGSGQFIPGFEEQLVGTKVGDEKDVTVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ I EV S +++++A +S A + + +++ +K
Sbjct: 232 EAVFKVKINEVKSKEVPELDDEMAKELDESVDSVDAYKEKYKKDLQEQKTLQAENNMKES 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ D+PE+++ E + ++Q+ ++ + +E+ +
Sbjct: 292 LIAQAVENAKVDIPEAMINTELDRMMQEFEQRIAQQGLNLELYYQFSGQTEEQLKESMKA 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ RV T + L I + NIE+++ ++ + L + +F + L
Sbjct: 352 DAEARVKTNLTLAAIAKAENIEISDTDVDAELSKMSEQFGLSVDDIKAALGNG----EVL 407
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ + K ID ++K +
Sbjct: 408 KDDLRIQKAIDVLVKESK 425
>gi|42783610|ref|NP_980857.1| trigger factor [Bacillus cereus ATCC 10987]
gi|67461811|sp|Q72ZV3|TIG_BACC1 RecName: Full=Trigger factor; Short=TF
gi|42739539|gb|AAS43465.1| trigger factor [Bacillus cereus ATCC 10987]
Length = 425
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 79/437 (18%), Positives = 184/437 (42%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MAAKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDEAGIFPVAHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKSLQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+G+ K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ E+ + +N++ A + ++ +++ + KV+ +
Sbjct: 232 PATFKVTVHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + D+PE++++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++++
Sbjct: 408 AEDLKVRKAVDFLVENA 424
>gi|30264541|ref|NP_846918.1| trigger factor [Bacillus anthracis str. Ames]
gi|47530004|ref|YP_021353.1| trigger factor [Bacillus anthracis str. 'Ames Ancestor']
gi|47566663|ref|ZP_00237485.1| trigger factor [Bacillus cereus G9241]
gi|49187365|ref|YP_030617.1| trigger factor [Bacillus anthracis str. Sterne]
gi|49481514|ref|YP_038523.1| trigger factor [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52141033|ref|YP_085796.1| trigger factor [Bacillus cereus E33L]
gi|65321842|ref|ZP_00394801.1| COG0544: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger
factor) [Bacillus anthracis str. A2012]
gi|118479639|ref|YP_896790.1| trigger factor [Bacillus thuringiensis str. Al Hakam]
gi|165872006|ref|ZP_02216647.1| trigger factor [Bacillus anthracis str. A0488]
gi|167640734|ref|ZP_02398994.1| trigger factor [Bacillus anthracis str. A0193]
gi|170708365|ref|ZP_02898809.1| trigger factor [Bacillus anthracis str. A0389]
gi|177653964|ref|ZP_02936005.1| trigger factor [Bacillus anthracis str. A0174]
gi|190567074|ref|ZP_03019990.1| trigger factor [Bacillus anthracis Tsiankovskii-I]
gi|196034538|ref|ZP_03101947.1| trigger factor [Bacillus cereus W]
gi|196039258|ref|ZP_03106564.1| trigger factor [Bacillus cereus NVH0597-99]
gi|196044819|ref|ZP_03112053.1| trigger factor [Bacillus cereus 03BB108]
gi|218905675|ref|YP_002453509.1| trigger factor [Bacillus cereus AH820]
gi|225866454|ref|YP_002751832.1| trigger factor [Bacillus cereus 03BB102]
gi|227817254|ref|YP_002817263.1| trigger factor [Bacillus anthracis str. CDC 684]
gi|228917111|ref|ZP_04080669.1| Trigger factor [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228929520|ref|ZP_04092539.1| Trigger factor [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|228935792|ref|ZP_04098604.1| Trigger factor [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|228948187|ref|ZP_04110471.1| Trigger factor [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228987725|ref|ZP_04147836.1| Trigger factor [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|229093570|ref|ZP_04224671.1| Trigger factor [Bacillus cereus Rock3-42]
gi|229124013|ref|ZP_04253205.1| Trigger factor [Bacillus cereus 95/8201]
gi|229158090|ref|ZP_04286160.1| Trigger factor [Bacillus cereus ATCC 4342]
gi|229186715|ref|ZP_04313873.1| Trigger factor [Bacillus cereus BGSC 6E1]
gi|229604674|ref|YP_002868757.1| trigger factor [Bacillus anthracis str. A0248]
gi|254724599|ref|ZP_05186382.1| trigger factor [Bacillus anthracis str. A1055]
gi|254736577|ref|ZP_05194283.1| trigger factor [Bacillus anthracis str. Western North America
USA6153]
gi|254754787|ref|ZP_05206822.1| trigger factor [Bacillus anthracis str. Vollum]
gi|254757619|ref|ZP_05209646.1| trigger factor [Bacillus anthracis str. Australia 94]
gi|41018193|sp|Q81LB8|TIG_BACAN RecName: Full=Trigger factor; Short=TF
gi|67461702|sp|Q633X1|TIG_BACCZ RecName: Full=Trigger factor; Short=TF
gi|67461760|sp|Q6HD53|TIG_BACHK RecName: Full=Trigger factor; Short=TF
gi|166229015|sp|A0RJ90|TIG_BACAH RecName: Full=Trigger factor; Short=TF
gi|226703992|sp|B7JQ66|TIG_BACC0 RecName: Full=Trigger factor; Short=TF
gi|254788983|sp|C3P9F8|TIG_BACAA RecName: Full=Trigger factor; Short=TF
gi|254788984|sp|C3L705|TIG_BACAC RecName: Full=Trigger factor; Short=TF
gi|254788985|sp|C1ETR9|TIG_BACC3 RecName: Full=Trigger factor; Short=TF
gi|30259199|gb|AAP28404.1| trigger factor [Bacillus anthracis str. Ames]
gi|47505152|gb|AAT33828.1| trigger factor [Bacillus anthracis str. 'Ames Ancestor']
gi|47556693|gb|EAL15025.1| trigger factor [Bacillus cereus G9241]
gi|49181292|gb|AAT56668.1| trigger factor [Bacillus anthracis str. Sterne]
gi|49333070|gb|AAT63716.1| trigger factor (TF) (vegetative protein 2) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|51974502|gb|AAU16052.1| trigger factor (TF) (vegetative protein 2) [Bacillus cereus E33L]
gi|118418864|gb|ABK87283.1| trigger factor [Bacillus thuringiensis str. Al Hakam]
gi|164712296|gb|EDR17832.1| trigger factor [Bacillus anthracis str. A0488]
gi|167511306|gb|EDR86692.1| trigger factor [Bacillus anthracis str. A0193]
gi|170126740|gb|EDS95623.1| trigger factor [Bacillus anthracis str. A0389]
gi|172081019|gb|EDT66097.1| trigger factor [Bacillus anthracis str. A0174]
gi|190562065|gb|EDV16034.1| trigger factor [Bacillus anthracis Tsiankovskii-I]
gi|195993080|gb|EDX57039.1| trigger factor [Bacillus cereus W]
gi|196024307|gb|EDX62980.1| trigger factor [Bacillus cereus 03BB108]
gi|196029885|gb|EDX68486.1| trigger factor [Bacillus cereus NVH0597-99]
gi|218537864|gb|ACK90262.1| trigger factor [Bacillus cereus AH820]
gi|225786111|gb|ACO26328.1| trigger factor [Bacillus cereus 03BB102]
gi|227003316|gb|ACP13059.1| trigger factor [Bacillus anthracis str. CDC 684]
gi|228596728|gb|EEK54390.1| Trigger factor [Bacillus cereus BGSC 6E1]
gi|228625409|gb|EEK82166.1| Trigger factor [Bacillus cereus ATCC 4342]
gi|228659315|gb|EEL14963.1| Trigger factor [Bacillus cereus 95/8201]
gi|228689779|gb|EEL43585.1| Trigger factor [Bacillus cereus Rock3-42]
gi|228771999|gb|EEM20454.1| Trigger factor [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228811545|gb|EEM57882.1| Trigger factor [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228823849|gb|EEM69669.1| Trigger factor [Bacillus thuringiensis serovar andalousiensis BGSC
4AW1]
gi|228830099|gb|EEM75717.1| Trigger factor [Bacillus thuringiensis serovar pondicheriensis BGSC
4BA1]
gi|228842529|gb|EEM87619.1| Trigger factor [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|229269082|gb|ACQ50719.1| trigger factor [Bacillus anthracis str. A0248]
Length = 425
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 79/437 (18%), Positives = 184/437 (42%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MAAKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDEAGIFPVAHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKSLQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+G+ K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ E+ + +N++ A + ++ +++ + KV+ +
Sbjct: 232 PATFKVTVHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + D+PE++++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++++
Sbjct: 408 AEDLKVRKAVDFLVENA 424
>gi|289705669|ref|ZP_06502054.1| trigger factor [Micrococcus luteus SK58]
gi|289557617|gb|EFD50923.1| trigger factor [Micrococcus luteus SK58]
Length = 454
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 59/442 (13%), Positives = 160/442 (36%), Gaps = 22/442 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + +L V +P + + ++ +DI ++ I GFR GK+P I+ +G+
Sbjct: 3 KSTAENLSPTRVKLTVEVPFEEVKPALDKAFKDIANQVQIPGFRQGKIPARLIEQRFGRE 62
Query: 62 ILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I+ + ++E + +++ + RP + + T + +D+
Sbjct: 63 IVVDQAVNEGLNTWFSAAIAEAELTPISRPEVDVT-----ATPDAENAEGPVVFTAEFDV 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P IE+ + L+VT + + E++ + + + + + + + D VT++ T +
Sbjct: 118 RPTIELPDYKGLKVTVEPAQATEEDEQKALDALRSRFGSLKDVDRPAAQDDFVTMNLTAT 177
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD ++ + + + VG+ + E L GL G+ E + G+
Sbjct: 178 VDGEQVD--QAEGLSYQVGAGTMLEGIDEALDGLSAGEDATFETTLN----GGEHDGETA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + V +++ A F++ + ++ ++ + + + + ++L+
Sbjct: 232 VVKLELTAVKERELPEADDEFAQLASEFDTIAELKEDLKKQAAEEAVSRQGVEARDKVLE 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
++ VP+ ++ + A + D E +
Sbjct: 292 ELAKLVEVPVPDGVIAEQVEQHFS--------AGGHTAGDDHDTAEHRAELEQNTREAFA 343
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
++L + E + V + E+ + + + + + +
Sbjct: 344 NEVILDEVAEAEEVTVDQGELIEYIIATSSEYGMDPNQF-AMMLDQGGQIPMIMGEVRRR 402
Query: 420 KVIDHILKSVQIVDRKVTFDQL 441
K + +L+ ++ D L
Sbjct: 403 KALAKVLEYAEVTDTDGKAVDL 424
>gi|256752438|ref|ZP_05493297.1| trigger factor [Thermoanaerobacter ethanolicus CCSD1]
gi|256748707|gb|EEU61752.1| trigger factor [Thermoanaerobacter ethanolicus CCSD1]
Length = 432
Score = 188 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 86/442 (19%), Positives = 189/442 (42%), Gaps = 18/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K E +++ IPS + + N + SK N+ GFR GK P ++ YG+
Sbjct: 1 MGVSLKKLEKSVATIELTIPSEKFEEGLNFAFKKNASKFNVPGFRRGKAPRVIVERYYGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ + E E L + P I I + I DL L +
Sbjct: 61 GVLYEDAVEYVFDEAYKEALKTFNLEPVDYPDINILQ---------IGKGKDLILEATVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYT 178
++P++E+ + +++ + V + +++ ++ ++ + N E +E GD +D+
Sbjct: 112 VMPEVELGEYKGIEIEKIEYNVYDGDVEYELEKLRQQNARIVPVEGRPAESGDIAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E +N + +GS + ++G + ++ FPED+ +++L GK
Sbjct: 172 GFIDGKPFEGGKAENYELELGSNTFIPGFEDQIIGHNVNETFDVNITFPEDYRVEELRGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A FE+ ++ +K+++ + ++K +
Sbjct: 232 SAVFKVTLKALNKKELPELDDEFAKDVSEFETLDELKADIRKKLEEKNRLEAENEMKEKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
+ + D+P+ +VE + + L+ + + + + E +
Sbjct: 292 VMKVVENAKVDIPDVMVERQIDISLRDLDYNLRYQGLDLNSYLSITGKTLENLRKEMWDG 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A RV T +V+ I + NIEVTEEE+++ L + + + ++ + + ++
Sbjct: 352 ALNRVKTQLVIDKIAKVENIEVTEEELENKLKEMAANYRINLEEFKKSL--TESQINSIK 409
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I K ID I +I+ ++
Sbjct: 410 EDIAYYKTIDFIFSKCKIISKE 431
>gi|315038088|ref|YP_004031656.1| trigger factor [Lactobacillus amylovorus GRL 1112]
gi|325956541|ref|YP_004291953.1| trigger factor [Lactobacillus acidophilus 30SC]
gi|312276221|gb|ADQ58861.1| trigger factor [Lactobacillus amylovorus GRL 1112]
gi|325333106|gb|ADZ07014.1| trigger factor [Lactobacillus acidophilus 30SC]
Length = 443
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 82/460 (17%), Positives = 185/460 (40%), Gaps = 26/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + EL I + + ++ ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTTGELTFDISQDEIKLGLDQAFRRVKKNLRVPGFRKGHVSRVIFDQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + A +P IT + D ++ +
Sbjct: 61 EALYEDALNIVLPNAYSAAVKEAGIAAVGQPQITPVSM---------DKGKDWTMKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V +K++D ++ + + N +K+ +SE GD VT+DY
Sbjct: 112 VEPEVKLGDYKGIEVPKQNTRVYQKDVDAELDKRREQNAELVLKKGKSEKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D E S +N +GS + L+G + GD ++ FP+D+ KDLAGK+
Sbjct: 172 TIDGKEFEGGSAENYSLELGSGAFIPGFEDQLIGHEAGDDVDVVVTFPKDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ++ ++ + +K E + ++
Sbjct: 232 AHFATKIHEVKSKQLPKLDDEFAKDVDDSVDTLDELKDKIKKDLKAQKEEAAKDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++ T ++P+++++ + + L + M Q +++ +
Sbjct: 292 IEGAVKNATVDEIPDAMIQEDVDTQLNQYLGNMQRQGIDPQTYYKLTNTNEQQLRSQFAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I + +++ T++E+ + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVDAEDLKATKDEIDKEIKDLSSEYNMDEKTVRNTLTDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
I K +D I + ++V +L + + E
Sbjct: 407 SHDITVRKAMDLITDNA----KQVAKAKLETKDLDDNKED 442
>gi|167636193|ref|ZP_02394497.1| trigger factor [Bacillus anthracis str. A0442]
gi|170688672|ref|ZP_02879877.1| trigger factor [Bacillus anthracis str. A0465]
gi|254687037|ref|ZP_05150895.1| trigger factor [Bacillus anthracis str. CNEVA-9066]
gi|254741615|ref|ZP_05199302.1| trigger factor [Bacillus anthracis str. Kruger B]
gi|167528414|gb|EDR91182.1| trigger factor [Bacillus anthracis str. A0442]
gi|170667358|gb|EDT18116.1| trigger factor [Bacillus anthracis str. A0465]
Length = 425
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 79/437 (18%), Positives = 183/437 (41%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MAAKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDEAGIFPVAHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKSLQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+G+ K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ E+ + +N++ A + ++ +++ + KV+ +
Sbjct: 232 PATFKVTVHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + D+PE+++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIDIPEAMINTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++++
Sbjct: 408 AEDLKVRKAVDFLVENA 424
>gi|312876446|ref|ZP_07736430.1| trigger factor [Caldicellulosiruptor lactoaceticus 6A]
gi|311796804|gb|EFR13149.1| trigger factor [Caldicellulosiruptor lactoaceticus 6A]
Length = 438
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 95/441 (21%), Positives = 196/441 (44%), Gaps = 17/441 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K ++V + + + + + I GFRPGK P S I+ YG+
Sbjct: 1 MEFKIEKKGTNKAIIEVEVEAEKFEEGLQKSYLKNAKYFKIPGFRPGKAPRSLIERAYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ID ++ E P+++ + RP + I + +
Sbjct: 61 EVFYDDAIDYVLNETYPKVIEESKLEVVSRPEVDIVQVG---------KGKSFIYKAEVY 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ + +++ + V E+E++ ++ + + N F E E GD VT+D+
Sbjct: 112 VKPEFELGQYKGIEIKKIEYPVAEEEVEHELEHLREENARFVPVEREVMQGDIVTIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD ++ + ++ + +GS E L+G+ G++KEIE FPED+ LAGKK
Sbjct: 172 FVDGEPIKGGTAQDYELTIGSNSFIPGFEEQLIGMNKGEEKEIEVTFPEDYQEPSLAGKK 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+K++ ++++ A FE+ ++ +IK+ ++ + ++ IL
Sbjct: 232 ATFKAKVKDIKVKELPELDDEFAKDVSEFETLEELKQSIRNRIKEKNDQRAKDEMIDAIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
+ I+ + D+PE ++EN+ N ++ V + Q + D E + A
Sbjct: 292 EKIAQNTSIDIPEPMIENQINYYVEDVARNLQYFGMTYERYLQAIGKTDAEFRSQFRERA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V ++L I + NI+ TEEE+Q L + + K+ + + + ++
Sbjct: 352 EKAVRNNLILEKIAKVENIQATEEELQKELERLAKMYNLEVDKLKERLSEDD--IEYIKE 409
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
I +K ID I ++ +I+ +
Sbjct: 410 GIILNKAIDFIYENAKIISEE 430
>gi|269926535|ref|YP_003323158.1| trigger factor [Thermobaculum terrenum ATCC BAA-798]
gi|269790195|gb|ACZ42336.1| trigger factor [Thermobaculum terrenum ATCC BAA-798]
Length = 500
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 81/482 (16%), Positives = 199/482 (41%), Gaps = 21/482 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+V + G L++ + + + + ++ I GFR GK P I+ G+
Sbjct: 3 KVESERLPGSVVRLEIEVDKETVDKEIDRAYRRLANRVVIPGFRKGKAPRVLIERYLGEE 62
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E EI+ + + + + P + + + ++ +
Sbjct: 63 AIFEEATREIVPNAIEQAVEQEKINPIAEPQ-----------AFKLLEREPFRFEVTLPV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +++ + ++V + V ++++D+ + + + + + + + +
Sbjct: 112 EPTVKLGDYKSVRVERREVIVTDEDVDKYIESLREREGVWVTPDPARPAKNGDQLVVDIE 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
E + ++++ ++G L + + L G + G E+E PED+ +++ AGK V
Sbjct: 172 EQYEGEEPRKREDLTIVLGRGYLPEDVEKALEGAEEGKDYEVESKLPEDYPVEEYAGKPV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K + +++D A R G ES +R ++++ E R +V +++
Sbjct: 232 KYKVTVKSIKELQLPDLDDDFAKRTGLGAESVEDLRQKVRERLQAEREAEERDRVANEVI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLA 354
+ + T D+P+ L+E+E + L +R +S+ + E+ A
Sbjct: 292 EKMVETSTVDMPQVLIEHEVDHQLAHIRENLSAQGIPLEQYLRFTQQTIEDLRNTLRPDA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++R+ +VL I + NIEV E E+Q + + R E+ +RA
Sbjct: 352 EKRLTRRLVLSEIAKAENIEVDESEIQREIDRIAERIDESERAEARALLDTQEWRDRIRA 411
Query: 415 PIFEDKVIDHILKSVQ---IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
I++ + +D I++ + ++ + + + +SS ++ ++S ++ + SE
Sbjct: 412 DIYDRRFLDRIVEIATGEPLYPKEEPASEGSEQTPDSSASQVDAENSAIQYVEGGTNESE 471
Query: 472 IS 473
++
Sbjct: 472 VT 473
>gi|78183647|ref|YP_376081.1| trigger factor [Synechococcus sp. CC9902]
gi|119371022|sp|Q3B0U0|TIG_SYNS9 RecName: Full=Trigger factor; Short=TF
gi|78167941|gb|ABB25038.1| Trigger factor [Synechococcus sp. CC9902]
Length = 447
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 70/442 (15%), Positives = 177/442 (40%), Gaps = 18/442 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V + + + V +P R T S+ E I+ + N+ GFR GKVP S + G
Sbjct: 7 KVSTESRPSSRLAVTVTVPGERCTASYEEAIKSLSRSINLPGFRKGKVPRSVLVQQLGGV 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++++I + + + +P + D +L L D+
Sbjct: 67 RIKATALEKLIDSAWRDAIKQESLEPISQPDL---SSGFDGLLESFNPGDELTFTLEADV 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVDY 177
P ++ S L+ + D +D + + K E + +
Sbjct: 124 APTPKLKSTKGLKAEYEAVVYDASRVDSMIEDSRKQLATVVPVEGRAAEKGDIAVLGFKG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T S D +E S ++ + + + E ++G+K G+ K ++ FP+D+ +D G
Sbjct: 184 TYSDDGSEIEGGSADSMDVDLDNGRMIPGFIEGVIGMKVGESKSVDCQFPDDYPKEDARG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K +K++ + +++ A + ++ + +R Q++K +E
Sbjct: 244 RKAAFAIELKDLKTRELPELDDAFAKQASEQDTMADLRKDLEQRLKDDAERRQTSNRNDG 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
++ + + D+PE+L++ E ++++ + + +++ + D +Q A
Sbjct: 304 LVKALVEQLEVDLPEALIQQESRNLVEQTAAQFAQQGMDVKSLFTPDLIRNLMQNSRPEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE-LR 413
+ R+ L + E +I++ + + + L + +K + + P L + +
Sbjct: 364 EERLRRSFALTALAEAEDIKLDDSAIDTKLKEV-------KKDLSADAKVDPERLRQAVM 416
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
+ +++++ + + + ++
Sbjct: 417 DDLMQEQLMSWLETNSTLTEKA 438
>gi|317486003|ref|ZP_07944858.1| trigger factor [Bilophila wadsworthia 3_1_6]
gi|316922776|gb|EFV44007.1| trigger factor [Bilophila wadsworthia 3_1_6]
Length = 440
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 81/444 (18%), Positives = 186/444 (41%), Gaps = 13/444 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++++ + ++ + + N ++ + ++ GFR GKVP S ++ +G+
Sbjct: 1 MEFVVENLSPTRKKIAFTLTADDVNAAINTAVKGFQKDLSLPGFRKGKVPASVVEKRFGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + I ++ + L + + K +++D+
Sbjct: 61 DVYARATQDEINGLLQKTLKDSSLTPVSSMEMD--------NHDAFARDTEFKCNVTFDV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP+IE +++ L+V Q +V + +++ + + + D TVD S
Sbjct: 113 LPEIEFPNYEGLEVDQAKADVSDDDVNEIIENLRGRMAELTEVTEDRLPQDGDTVDVDYS 172
Query: 181 ---VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ ++D +N +G + ++ K G++K FP D+ K LAG
Sbjct: 173 GTDEEGNKIDDVQGENFGVALGQGQALPDFEALVKTAKVGEEKTGPVNFPADYPHKPLAG 232
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K V + ++ + VN + A ++G ES M+ + + R + +++
Sbjct: 233 KTVIFTIKVNKIQTSQKPEVNEEFAQKVGQESLEKMKASIVEHVSATKAQAARSEAMKKL 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D + K +F++P+S++ ++Q+ ++ D EE + A
Sbjct: 293 IDGLLEKVSFEIPDSMLNARVERVVQEQAMKLQRMGLDDLRKDQAQEEKREEAKKEALET 352
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + L + +K NI V ++E++ A+Y R KK+ + + K + ELR I
Sbjct: 353 LRPQVFLMALAQKENITVNDQEVEMAIYGMAMRAQQDYKKVSEAYHKS-GLIYELRDRIL 411
Query: 418 EDKVIDHILKSVQIVDR-KVTFDQ 440
DK ++ + +I + V+ +
Sbjct: 412 ADKALEMVYSKAKINEVPAVSLSE 435
>gi|17231173|ref|NP_487721.1| trigger factor [Nostoc sp. PCC 7120]
gi|21264072|sp|Q8YQX9|TIG_ANASP RecName: Full=Trigger factor; Short=TF
gi|17132814|dbj|BAB75380.1| trigger factor [Nostoc sp. PCC 7120]
Length = 471
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 84/486 (17%), Positives = 188/486 (38%), Gaps = 35/486 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + L++ I ++ + I+++ NI GFR GKVP + GK
Sbjct: 1 MKVTQEKLPASQIGLEIEITPEITQKTYEQVIKNLSRTVNIPGFRKGKVPRQVLLQRLGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + ++E++++ + + + + A +P + D E L + D
Sbjct: 61 THIKAAALEELLQDGIEQAIKQESIAAIGQPRL---RSSFDDLINSYEPGQPLTFTAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--------ETESEIGD 171
+ P+I + + L+ + + D +D + + + +
Sbjct: 118 VEPEINLVQYTGLEAKAEEIKYDPARVDEVLEKERQELATLIPVEGRSAQIGDVAVVDFK 177
Query: 172 KVTVDYTVSVDN---VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPE 228
V +N + + Q + +VG+ GD KE+ FP+
Sbjct: 178 GVIAKAEGDDENAEPEPIPGGDASDFQVELQEDRFIPGFVTGIVGMNPGDTKEVSAQFPD 237
Query: 229 DHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEF 287
+ ++LAGK ++KE+ +N+D A F++ A+R +++ ++ +E
Sbjct: 238 PYVNQELAGKPAIFTVTLKEIKEKELPELNDDFAQEVSDFDTLEALRASLAERYQKEAED 297
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EE 345
+ + +L + D+PE+L+E E + +L + +S + + + D +
Sbjct: 298 KTKNNQQEALLGELVKHIEVDLPETLIEKEVDAMLTQTAMRLSQQGLDVKKLFTQDIIPQ 357
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ A R+ + L + ++ +I VT EE+Q+ + + + ++P +
Sbjct: 358 LRERSRPEAVERLKRSLGLQEVAKRESITVTPEEIQARVTELVQQYPDEDI--------D 409
Query: 406 PNALAEL-RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQ 464
L + + +K+ID +L + + +L S +S E +
Sbjct: 410 AERLQTIVENELLSEKIIDWLLANSTV--------ELVPEGSLASQEPEITAPETEAETI 461
Query: 465 SEEAPS 470
A S
Sbjct: 462 EVAAES 467
>gi|227889794|ref|ZP_04007599.1| trigger factor [Lactobacillus johnsonii ATCC 33200]
gi|227849658|gb|EEJ59744.1| trigger factor [Lactobacillus johnsonii ATCC 33200]
Length = 449
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 79/438 (18%), Positives = 165/438 (37%), Gaps = 22/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + EL I + ++ + ++ + GFR G V YG+
Sbjct: 1 MSVKWEKTGKTSGELTFEISQEEVKKGLDQAFKRVKKNLRVPGFRKGHVSRVIFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P IT + ++ +
Sbjct: 61 EALYEDALNIVLPEAYTAAVKEAGIAPVGQPQITPVSM---------DKNKAWVMKATVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + ++V + V K++D ++ + + N +K+ ++ GD VT+DYT
Sbjct: 112 VKPEVKLGDYKGIEVPKQNTRVLVKDVDAELNKRREQNAELVLKDGKAAKGDTVTIDYTG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + S +N +GS + L+ K GD ++ FPED+ KDLAGK+
Sbjct: 172 TIDGKPFDGGSAQNYSLELGSGTFIPGFEDQLIDHKAGDDVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFES---ESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I EV S ++++ A + + + K +
Sbjct: 232 AHFATKIHEVKSKELPKLDDEFAKDVDDSVESLDELKDKIKKDLKKHKEDDAKDAIQDAA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
I + N +VP+++++ + L + M Q + + +
Sbjct: 292 IKGAVENATIDEVPQAMIDEDVQNQLNQYLGNMQRQGIDPQTYFKLTGTTEAQLREQLAK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K ++ T +E++ + + EK + L
Sbjct: 352 GAAERVKTNLVLEAIVAKEKLDATADEIKQEIKDLAHDYNMEEKVVRRSLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ I K ID + +
Sbjct: 407 KHDIAIRKAIDLVADKAK 424
>gi|188585727|ref|YP_001917272.1| trigger factor [Natranaerobius thermophilus JW/NM-WN-LF]
gi|229558050|sp|B2A157|TIG_NATTJ RecName: Full=Trigger factor; Short=TF
gi|179350414|gb|ACB84684.1| trigger factor [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 446
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 94/446 (21%), Positives = 209/446 (46%), Gaps = 17/446 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + K +L V + NR+ D+ + + + + I GFR GKVP +++ +G
Sbjct: 1 MSSTWEKIDKNKIKLSVEVDENRVEDALEQAYKKVVKQVEIPGFRKGKVPRKILENRFGP 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I+ ++ E E L + + +P I I++ E LK + +
Sbjct: 61 EVLYEDAIEILVPEAYQEALEEHEIEPVDQPEIDIDQM---------EKGQPLKFNATVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+ P++E+ ++ L+V ++ EV E++++ ++ ++ + + +E E E+E GD++ +D+
Sbjct: 112 VKPEVELGTYKGLEVEKEKVEVTEEDVENELKQMQEQHAEYEDVEDGEAENGDRLVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD +E +N +GS E LVG K G++KE++ FPED+ ++L GK
Sbjct: 172 GYVDGEPIEGGQAENHNIELGSNQFIPGFEEQLVGSKPGEEKEVKVTFPEDYQNEELKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ N +KE+ + ++++ A F++ + ++++ +E Q+V+ Q+
Sbjct: 232 EATFNVKVKEIKKKNLLPIDDEFAKDVSDFDTLEEFKNDIRNRLEEEAERAAEQQVEEQV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHML 353
+ ++P+ +++ E + +L++ +S ++ + +
Sbjct: 292 VTKALENAEVEIPQPMIDQEVDNMLKEFEQNLSYQGLNLDTYYKLANTDEDAMKEQFKGS 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ RV +VL I ++ I TEEE+ + + + E + F + +++L+
Sbjct: 352 AETRVKRNLVLEAIKDEEGITATEEEIDEEINKIAEQA-QQEADKIKEFLEMQGRMSQLK 410
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFD 439
I K +D + ++ + + D
Sbjct: 411 NEIAIRKSVDLLKDEAKVTVVEKSND 436
>gi|167038051|ref|YP_001665629.1| trigger factor [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040916|ref|YP_001663901.1| trigger factor [Thermoanaerobacter sp. X514]
gi|300914952|ref|ZP_07132268.1| trigger factor [Thermoanaerobacter sp. X561]
gi|307723814|ref|YP_003903565.1| trigger factor [Thermoanaerobacter sp. X513]
gi|320116460|ref|YP_004186619.1| trigger factor [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|238687605|sp|B0K534|TIG_THEPX RecName: Full=Trigger factor; Short=TF
gi|238687679|sp|B0KBA5|TIG_THEP3 RecName: Full=Trigger factor; Short=TF
gi|166855156|gb|ABY93565.1| trigger factor [Thermoanaerobacter sp. X514]
gi|166856885|gb|ABY95293.1| trigger factor [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|300889887|gb|EFK85033.1| trigger factor [Thermoanaerobacter sp. X561]
gi|307580875|gb|ADN54274.1| trigger factor [Thermoanaerobacter sp. X513]
gi|319929551|gb|ADV80236.1| trigger factor [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 432
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 86/442 (19%), Positives = 189/442 (42%), Gaps = 18/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K E +++ IPS + + N + SK N+ GFR GK P ++ YG+
Sbjct: 1 MGVSLKKLEKSVATIELTIPSEKFEEGLNFAFKKNASKFNVPGFRRGKAPRVIVERYYGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ + E E L + P I I + I DL L +
Sbjct: 61 GVLYEDAVEYVFDEAYKEALKTFNLEPVDYPDINILQ---------IGKGKDLILEATVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYT 178
++P++E+ + +++ + V + +++ ++ ++ + N E +E GD +D+
Sbjct: 112 VMPEVELGEYKGIEIEKIEYNVYDGDVEYELEKLRQQNARIVPVEGRPAESGDIAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E +N + +GS + ++G + ++ FPED+ +++L GK
Sbjct: 172 GFIDGKPFEGGKAENYELELGSNTFIPGFEDQIIGHNVNETFDVNITFPEDYRVEELRGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A FE+ ++ +K+++ + ++K +
Sbjct: 232 SAVFKVTLKALNKKELPELDDEFAKDVSEFETLDELKADIRKKLEEKNRVEAENEMKEKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
+ + D+P+ +VE + + L+ + + + + E +
Sbjct: 292 VMKVVENAKVDIPDVMVERQIDISLRDLDYNLRYQGLDLNSYLSITGKTLENLRKEMWDG 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A RV T +V+ I + NIEVTEEE+++ L + + + ++ + + ++
Sbjct: 352 ALNRVKTQLVIDKIAKVENIEVTEEELENKLKEMAANYRINLEEFKKSL--TESQINSIK 409
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I K ID I +I+ ++
Sbjct: 410 EDIAYYKTIDFIFSKCKIISKE 431
>gi|119370931|sp|Q1AVS8|TIG_RUBXD RecName: Full=Trigger factor; Short=TF
Length = 475
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 88/483 (18%), Positives = 197/483 (40%), Gaps = 22/483 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M E K LDV +P + + ++ ++R + + GFRPGK P +++ G+
Sbjct: 1 MTANVTKLEDNKVRLDVEVPPEAVREGVEAKLRELRKQVRVPGFRPGKAPRRVLETHLGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I E + E + + D R RP I ++ + + +
Sbjct: 61 DYIYMEALQESLPAWYSRAVIDADIRPIDRPEIHF--------DDPLDEKKGFRFSATVE 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P+ + + L+V + EV E++++ ++ E+ ++ GD V +D+
Sbjct: 113 VRPEARLGEYKGLEVPKREVEVTEEQVEERLEELRGQFATLAAVEDRPVREGDFVILDFK 172
Query: 179 VSVD-NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
L ++ VG +L + + LVG+K G++K+ FP D+ + L G
Sbjct: 173 GERMAGGELPGAEAEDYMLEVGRGELLEDFEKNLVGMKAGERKQFAVTFPMDYREESLRG 232
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ V +KE+ ++++ A FE+ +R +++++ + + + +
Sbjct: 233 QSVLFRVHVKEIKERDLPPLDDEFAKEASEFETLEELRAAIREQLEEAARRRAEGEFRAR 292
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
+L+ ++ + +VPE +VE++ +++ +S+ K ++ + EE +
Sbjct: 293 VLEAVAERAEVEVPEVMVEDKAEEMVRSFERSVSAQGIKPEDYYRIAGTGREEFKRQVRD 352
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A V +VL + IE EE ++ + +++ ++ A L
Sbjct: 353 DAADTVKKELVLDAVVAAEGIEADEEAVRHEIEHLAEDSGRSPEEVEKSLREN-GTYALL 411
Query: 413 RAPIFEDKVIDHILKSVQIV-----DRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEE 467
R + K +D +++ + V D ++ E E ++ +++ E + EE
Sbjct: 412 REELARQKALDFLVEHARAVPMPPEDEQMPGSGEEPGGGEGVVEARVESAAETEAERDEE 471
Query: 468 APS 470
S
Sbjct: 472 GES 474
>gi|228910308|ref|ZP_04074125.1| Trigger factor [Bacillus thuringiensis IBL 200]
gi|228849368|gb|EEM94205.1| Trigger factor [Bacillus thuringiensis IBL 200]
Length = 425
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 80/437 (18%), Positives = 183/437 (41%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MSTKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIEEAGIFPVDHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKSLQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+G+ K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I E+ + +N++ A + ++ +++ + KV+ +
Sbjct: 232 PATFKVTIHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + ++PE+++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIEIPEAMINTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ S + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTSEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++++
Sbjct: 408 AEDLKVRKAVDFLVENA 424
>gi|229192685|ref|ZP_04319644.1| Trigger factor [Bacillus cereus ATCC 10876]
gi|228590775|gb|EEK48635.1| Trigger factor [Bacillus cereus ATCC 10876]
Length = 425
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 78/437 (17%), Positives = 183/437 (41%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MSTKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIEEAGIFPVDHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKSLQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+G+ K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I E+ + +N++ A + ++ +++ + K++ +
Sbjct: 232 PATFKVTIHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKIRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + ++PE+++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIEIPEAMINTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++++
Sbjct: 408 AEDLKVRKAVDFLVENA 424
>gi|30022561|ref|NP_834192.1| trigger factor [Bacillus cereus ATCC 14579]
gi|75760426|ref|ZP_00740468.1| Trigger factor, ppiase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|206969982|ref|ZP_03230936.1| trigger factor [Bacillus cereus AH1134]
gi|218234246|ref|YP_002369280.1| trigger factor [Bacillus cereus B4264]
gi|218899641|ref|YP_002448052.1| trigger factor [Bacillus cereus G9842]
gi|228903002|ref|ZP_04067142.1| Trigger factor [Bacillus thuringiensis IBL 4222]
gi|228923226|ref|ZP_04086516.1| Trigger factor [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228941640|ref|ZP_04104187.1| Trigger factor [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228954756|ref|ZP_04116778.1| Trigger factor [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228960749|ref|ZP_04122388.1| Trigger factor [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228974569|ref|ZP_04135135.1| Trigger factor [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228981164|ref|ZP_04141464.1| Trigger factor [Bacillus thuringiensis Bt407]
gi|229048190|ref|ZP_04193759.1| Trigger factor [Bacillus cereus AH676]
gi|229071982|ref|ZP_04205192.1| Trigger factor [Bacillus cereus F65185]
gi|229081739|ref|ZP_04214232.1| Trigger factor [Bacillus cereus Rock4-2]
gi|229111944|ref|ZP_04241488.1| Trigger factor [Bacillus cereus Rock1-15]
gi|229129765|ref|ZP_04258732.1| Trigger factor [Bacillus cereus BDRD-Cer4]
gi|229147043|ref|ZP_04275403.1| Trigger factor [Bacillus cereus BDRD-ST24]
gi|229152675|ref|ZP_04280863.1| Trigger factor [Bacillus cereus m1550]
gi|229180749|ref|ZP_04308087.1| Trigger factor [Bacillus cereus 172560W]
gi|296504964|ref|YP_003666664.1| trigger factor [Bacillus thuringiensis BMB171]
gi|41018192|sp|Q812Q9|TIG_BACCR RecName: Full=Trigger factor; Short=TF
gi|226703993|sp|B7IIY4|TIG_BACC2 RecName: Full=Trigger factor; Short=TF
gi|226703994|sp|B7HEA5|TIG_BACC4 RecName: Full=Trigger factor; Short=TF
gi|29898119|gb|AAP11393.1| Trigger factor, ppiase [Bacillus cereus ATCC 14579]
gi|74492075|gb|EAO55249.1| Trigger factor, ppiase [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|206735670|gb|EDZ52838.1| trigger factor [Bacillus cereus AH1134]
gi|218162203|gb|ACK62195.1| trigger factor [Bacillus cereus B4264]
gi|218544474|gb|ACK96868.1| trigger factor [Bacillus cereus G9842]
gi|228602727|gb|EEK60210.1| Trigger factor [Bacillus cereus 172560W]
gi|228630821|gb|EEK87462.1| Trigger factor [Bacillus cereus m1550]
gi|228636431|gb|EEK92901.1| Trigger factor [Bacillus cereus BDRD-ST24]
gi|228653681|gb|EEL09552.1| Trigger factor [Bacillus cereus BDRD-Cer4]
gi|228671508|gb|EEL26808.1| Trigger factor [Bacillus cereus Rock1-15]
gi|228701584|gb|EEL54077.1| Trigger factor [Bacillus cereus Rock4-2]
gi|228711141|gb|EEL63106.1| Trigger factor [Bacillus cereus F65185]
gi|228723177|gb|EEL74553.1| Trigger factor [Bacillus cereus AH676]
gi|228778364|gb|EEM26631.1| Trigger factor [Bacillus thuringiensis Bt407]
gi|228784972|gb|EEM32985.1| Trigger factor [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228798965|gb|EEM45940.1| Trigger factor [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228804954|gb|EEM51551.1| Trigger factor [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228817852|gb|EEM63930.1| Trigger factor [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228836432|gb|EEM81783.1| Trigger factor [Bacillus thuringiensis serovar huazhongensis BGSC
4BD1]
gi|228856678|gb|EEN01198.1| Trigger factor [Bacillus thuringiensis IBL 4222]
gi|296326016|gb|ADH08944.1| trigger factor [Bacillus thuringiensis BMB171]
gi|326942252|gb|AEA18148.1| trigger factor [Bacillus thuringiensis serovar chinensis CT-43]
Length = 425
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 79/437 (18%), Positives = 183/437 (41%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MSTKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIEEAGIFPVDHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKSLQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+G+ K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I E+ + +N++ A + ++ +++ + KV+ +
Sbjct: 232 PATFKVTIHEIKTKELPELNDEFAKEADEAVATLDELKAKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + ++PE+++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIEIPEAMINTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++++
Sbjct: 408 AEDLKVRKAVDFLVENA 424
>gi|218779307|ref|YP_002430625.1| trigger factor [Desulfatibacillum alkenivorans AK-01]
gi|226703997|sp|B8FA61|TIG_DESAA RecName: Full=Trigger factor; Short=TF
gi|218760691|gb|ACL03157.1| trigger factor [Desulfatibacillum alkenivorans AK-01]
Length = 438
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 90/444 (20%), Positives = 211/444 (47%), Gaps = 13/444 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +K+ L + P+ + + + +++ +A +KGFRPGK P S ++ LY
Sbjct: 1 MQVTVEDLSSVKKVLHIEAPAEDVKKALDSAYAELKKQAKVKGFRPGKAPRSVLERLYKS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ S+ EII + + + + + P I SD K + +I
Sbjct: 61 DVESDVAGEIISDAFRDAIMETKLKIVGPPEIEPPAIVSD---------EPYKFDATVEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT-- 178
P++ + ++++++++ + E+EI+ Q+A I KN + E +E + ++ V
Sbjct: 112 FPELSDLNLKEIELSKNMYKATEQEIENQIAMIRKNMSSLETEEEDRPAKEEDFVLIDYE 171
Query: 179 -VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
V D E + +N +G+ + + +VG+K ++K+ E FPED+ K+LA
Sbjct: 172 GVCPDGQPDELRFTENFTMELGTGRILKDFDAQIVGMKRDEEKDFEISFPEDYFNKELAS 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+V+ + +KE+ + ++++ A +E+ ++ ++Q + Q++ Q
Sbjct: 232 KQVKFHVKLKEIRKQILPELDDEFAKDLGEYETLDQLKDSIRDHLQQGYDRRSEQELDEQ 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ + N+ F+VPE+L+++E ++ + +S + ++ + E+ + Y A++
Sbjct: 292 VFQALLNRVEFEVPETLIKHETASMVSEAERALSYRDMTFEDTGATKEDMEERYREPAEQ 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V ++L I E+ N+E+ EEE+++A + + ++ + LR +
Sbjct: 352 QVRRYLLLDKIVEQENVELPEEELENAFKGMAESLRQPLEIVKKYYASDAEQMNMLRQTL 411
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQ 440
+ + + ++ +I + ++ +
Sbjct: 412 LQKEALKYVKNLNEIKEVELELQE 435
>gi|295399415|ref|ZP_06809397.1| trigger factor [Geobacillus thermoglucosidasius C56-YS93]
gi|312110026|ref|YP_003988342.1| trigger factor [Geobacillus sp. Y4.1MC1]
gi|294978881|gb|EFG54477.1| trigger factor [Geobacillus thermoglucosidasius C56-YS93]
gi|311215127|gb|ADP73731.1| trigger factor [Geobacillus sp. Y4.1MC1]
Length = 428
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 83/439 (18%), Positives = 188/439 (42%), Gaps = 21/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + ++ + + + + + GFR GKVP + +G
Sbjct: 1 MSVKWEKLEGHEGVLTVEVDAKKVDEGLDAAFKKVVKNITVPGFRKGKVPRVIFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E + + + P I I + E +L
Sbjct: 61 EALYQDALDILLPEAYAKAVEEAGIEPVDVPKIDIEQM---------EKGKNLIFTARVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L+V + V +++++ ++ + ++ ++ + E GD +D+
Sbjct: 112 VKPEVKLGQYKGLEVEKMDATVTDEDVENELKRLQEDFAELVVKEDGKIEKGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS + LVG+K G++KEIE FPE++ K+LAGK
Sbjct: 172 GFVDGEPFEGGKAENYSLEIGSGVFIPGFEDQLVGMKAGEEKEIEVTFPEEYHAKELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++ A E+ ++ ++++ + ++
Sbjct: 232 PATFKVKVHEVKAKQLPALDDEFAKDVDDEVETLEQLKEKIRARLEETKKNEAETALRDA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+++ + D+PE +V+NE + +L++ + Q + +
Sbjct: 292 VVEKAAENAEIDIPEVMVKNETDRMLREFDQRLQMQGLNLDLYYQFSGQDEAALREQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I + NIEVTEEE+ L + + +K+ + L +
Sbjct: 352 DAEKRVRVALTLEAIAKAENIEVTEEEVNEELEKMAKAYNLEVEKLKELL----GNLEGV 407
Query: 413 RAPIFEDKVIDHILKSVQI 431
+ + K ID +++ ++
Sbjct: 408 KEDLKWRKTIDFLVEHSKV 426
>gi|289434550|ref|YP_003464422.1| trigger factor (prolyl isomerase) [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289170794|emb|CBH27336.1| trigger factor (prolyl isomerase) [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 427
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 87/437 (19%), Positives = 178/437 (40%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG +L I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + P + I E L
Sbjct: 61 EALYQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESM---------EKGETWVLTADVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV-DYT 178
+ P++++ + L+V + E+ +E++ ++ ++ + VKE + D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRDEELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGAAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V + E+ + ++++LA E+ ++ S ++++ + V Q + +
Sbjct: 232 PVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISNRLQEAKKDSVAQAKQEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++ D+P ++V +E + ++ ++ + Q +E
Sbjct: 292 VIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMEQ 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIE TEE + + ++ + + ++EL
Sbjct: 352 DAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAAL----GDMSEL 407
Query: 413 RAPIFEDKVIDHILKSV 429
++ + K ID +L S
Sbjct: 408 KSDLKIRKAIDVLLDSA 424
>gi|239827925|ref|YP_002950549.1| trigger factor [Geobacillus sp. WCH70]
gi|259533615|sp|C5D5L5|TIG_GEOSW RecName: Full=Trigger factor; Short=TF
gi|239808218|gb|ACS25283.1| trigger factor [Geobacillus sp. WCH70]
Length = 428
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 80/439 (18%), Positives = 188/439 (42%), Gaps = 21/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + EG + L V + + ++ + + + + I GFR GKVP + +G
Sbjct: 1 MSVKWEKLEGNEGVLTVEVDAEKVNEGLDAAFKKVVKNIAIPGFRKGKVPRVIFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E + + + P I I + E L
Sbjct: 61 EALYQDALDILLPEAYAKAVEEAGIEPVDVPKIDIEQM---------EKGKSLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L+V + V +++++ ++ + +N ++ + E GD +D+
Sbjct: 112 VKPEVKLGQYKGLEVEKMDDTVTDEDVENELKRLQENYAELVVKEDGKVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS + L+G++ G++KEIE FPE++ K+LAGK
Sbjct: 172 GFVDGEPFEGGKAENYSLEIGSGTFIPGFEDQLIGMQAGEEKEIEVTFPEEYHAKELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ E+ ++++ A E+ ++ +++++ + ++
Sbjct: 232 PATFKVKVHEIKEKRLPALDDEFAKDVDDEVETLEQLKDKIRKRLEEMKKNEAEAALRDA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+++ + D+PE +V+NE + +L++ + + + +
Sbjct: 292 VVEKAAENAEIDIPEVMVKNETDRMLREFDQRLQMQGLNLELYYQFSGQDEAALREQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + + I + NIEVTEEE+ L + + +K+ + L +
Sbjct: 352 DAEKRVRVALTIEAIAKAENIEVTEEEINEELEKMAKAYNLEVEKLKELL----GNLDGV 407
Query: 413 RAPIFEDKVIDHILKSVQI 431
+ + K ID ++++ ++
Sbjct: 408 KEDLKWRKTIDFLVENSKV 426
>gi|229918352|ref|YP_002886998.1| trigger factor [Exiguobacterium sp. AT1b]
gi|259533610|sp|C4L4J0|TIG_EXISA RecName: Full=Trigger factor; Short=TF
gi|229469781|gb|ACQ71553.1| trigger factor [Exiguobacterium sp. AT1b]
Length = 430
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 83/439 (18%), Positives = 184/439 (41%), Gaps = 16/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + G + L P+ + + + + N+ GFR GK+P +YG+
Sbjct: 1 MTAKWEKTSGSQGVLTYEAPAEAFDKAVDAAFKTVVKDLNVPGFRKGKLPRPMFNKMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D + ++ + + + +I + G +E + ++++
Sbjct: 61 EALYQDALDILYRDTIQGAVEEAGFEPIALENIDV--------DGTLEKGKPVAFKVTFV 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ + L+ EV E E+ ++ + + VKE E GD D+
Sbjct: 113 VEPEAELGEYKGLEYEAVSTEVTEDEVTAELEALQQQGAELAVKEGAIENGDTAVFDFAG 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D E + +N +GS E ++G+ G++K++E FPE++ ++LAGK
Sbjct: 173 FADGEQFEGGTAENYTLEIGSGQFIPGFEEQMIGMTAGEEKDVEVTFPEEYHAENLAGKP 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV + ++++ A + ++ ++++ + ++ Q+
Sbjct: 233 ATFKVKLHEVKTKQVPELDDEFAKDIDESVSTLDELKASIRERLEAGKKQEAEGTMRDQL 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHML 353
++ + T DVPE LVE E + ++Q+ +SS N + + +E +
Sbjct: 293 VEQATANATIDVPEVLVEQEVDRMVQEFGSRVSSQGIDLNMYFELTGTSEEAMREEMKEQ 352
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ RV +VL I +K IEV++E+ + L + + ++ L L+
Sbjct: 353 AEERVKARLVLKAIADKEAIEVSDEDAEKELEEMSKLYNIAPDQLRTML-APQGGLETLK 411
Query: 414 APIFEDKVIDHILKSVQIV 432
+ K ID ++++ +
Sbjct: 412 GDLKFRKAIDILVENGKAK 430
>gi|312868063|ref|ZP_07728267.1| trigger factor [Streptococcus parasanguinis F0405]
gi|311096467|gb|EFQ54707.1| trigger factor [Streptococcus parasanguinis F0405]
Length = 427
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E L I ++ + + E ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNHGVLTFTISQEQIKPALDRVFESVKKTLNVPGFRKGHIPRPIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +++++ + + +P+ + E D L +
Sbjct: 61 EALYQDALNDLLPAAYEAAVKEAGIEVVAQPTFDVVSM---------EKGQDWTLTAAVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+V+ + EV + ++D ++ N VKE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVSVEVSKEVTDADVDARIERERNNLAELVVKEGAAAEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + N +GS + LVG G+ ++ FPED+ DLAGK
Sbjct: 172 GSIDGVEFDGGKGDNFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ ++ +++ E V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLDELKEKYRKELAAAKEEAYNDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+D D+PE ++ E + + + M + E+ + Y
Sbjct: 292 AIDLAVENAEIVDLPEEMIHEEVHRSINEFLGNMQRQGISPEMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E TEEE+ + + Q + +++ +
Sbjct: 352 AEAESRTKTNLVVEAVAKAEGFEATEEEINAEIEQLAADYNMPVEQVRNLLSP-----EM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDITVKKAVNVITSTAKVK 427
>gi|297160511|gb|ADI10223.1| trigger factor [Streptomyces bingchenggensis BCW-1]
Length = 476
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 91/480 (18%), Positives = 194/480 (40%), Gaps = 23/480 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L S + + I + + GFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKPSLDAAYKKINQQVTVPGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEGELNPLGQPEVDITE---------LKDNELLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P +EI + ++VT D EV +++ID+ + ++ E + GD V VD
Sbjct: 112 VRPTVEIPDYSGIEVTVDSVEVSDEDIDKAVEQLRDRFATTSAVERAAAEGDIVVVDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
V+ +LED V + +GS +L E + GL+ G F + GK+
Sbjct: 172 KVEGEVLEDGVANGVNYTIGSGELLEGIDEAVTGLEAG----GSATFTSELKGGSAKGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + EV + +++D A F++ +RG ++++ +F + + ++L
Sbjct: 228 AEVSVKVSEVKARELPELDDDFAQLASEFDTLEELRGDTRGRLERSKKFDQATQAQEKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
D + +PE L+E+E + + + + +E
Sbjct: 288 DALLELVEVPIPEKLLEDEIQTRKHNLEHHQLGQMGLTLDAYLEMQEKTADEFEAELKEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ + T VL + K + V +EE+ L ++ + + + L
Sbjct: 348 AEKGIKTQFVLDELVNKEKLSVGQEELTEHLMRRAQSSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP--EKLLDKSSKVETFQSEEAPSE 471
+ K + ++++ ++VD K L D+ E+ E ++ + E+ E +E
Sbjct: 407 GEVARGKALAVVVEAAKVVDDKGETVDLDDDEDETGETVEVTSEEPAAEESDNEAEKAAE 466
>gi|291536688|emb|CBL09800.1| trigger factor [Roseburia intestinalis M50/1]
gi|291537972|emb|CBL11083.1| trigger factor [Roseburia intestinalis XB6B4]
Length = 451
Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats.
Identities = 82/437 (18%), Positives = 185/437 (42%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + + + ++ D+ + K ++ GFR GKVP I+ +YG
Sbjct: 1 MSVQVENLEKNMAKLTIEVAAEKVEDAIQAAYMKEKGKISVPGFRKGKVPRKMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + +I+E + + + RP+I + + IE
Sbjct: 61 GVFYEDAANTLIQENYAQAVEESGVDVVSRPTIEVVQ---------IEAGKPFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++++ + +QVT+ V ++E+ ++ + + N + GD +D+
Sbjct: 112 VRPEVKLGKYKGVQVTKIDTTVSDEEVAAELEKERQKNSRTVTVTDRPIAEGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N +GS + LVG GD+ ++ FPE + DLAGK
Sbjct: 172 GFVDGVAFEGGKGENHPLEIGSHSFIDTFEDQLVGKNAGDEVDVNVTFPEKYQAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV + +N++ A F + + + ++ E ++ + +
Sbjct: 232 PALFKVKIHEVKAKELPELNDEFAQDVSEFNTLEEYKEDLKKHLEVQKEDEAKRTKEDEA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ I +K T ++PE++++ + ++ + ++ + + ++ +
Sbjct: 292 IQKIIDKSTMEIPEAMIKTQCENMVNEFAQRLAQSGLSMEQYMQFSGLTLDKLEEQVRPE 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ R+ + +VL I + NIEV+EEE+ + + + + K+ ++ ++
Sbjct: 352 AETRIKSSLVLEQIAKDENIEVSEEEIDAEIEKMAKAYGMEADKLKEYMGDAE--KESMK 409
Query: 414 APIFEDKVIDHILKSVQ 430
I K +D ++++V+
Sbjct: 410 RDISVTKAVDLVMENVK 426
>gi|240146207|ref|ZP_04744808.1| trigger factor [Roseburia intestinalis L1-82]
gi|257201663|gb|EEU99947.1| trigger factor [Roseburia intestinalis L1-82]
Length = 447
Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats.
Identities = 82/437 (18%), Positives = 185/437 (42%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + + + ++ D+ + K ++ GFR GKVP I+ +YG
Sbjct: 1 MSVQVENLEKNMAKLTIEVAAEKVEDAIQAAYMKEKGKISVPGFRKGKVPRKMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + +I+E + + + RP+I + + IE
Sbjct: 61 GVFYEDAANTLIQENYAQAVEESGVDVVSRPTIEVVQ---------IEAGKPFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++++ + +QVT+ V ++E+ ++ + + N + GD +D+
Sbjct: 112 VRPEVKLGKYKGVQVTKIDTTVSDEEVAAELEKERQKNSRTVTVTDRPIAEGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N +GS + LVG GD+ ++ FPE + DLAGK
Sbjct: 172 GFVDGVAFEGGKGENHPLEIGSNSFIDTFEDQLVGKNAGDEVDVNVTFPEKYQAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV + +N++ A F + + + ++ E ++ + +
Sbjct: 232 PALFKVKIHEVKAKELPELNDEFAQDVSEFNTLEEYKEDLKKHLEVQKEDEAKRTKEDEA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ I +K T ++PE++++ + ++ + ++ + + ++ +
Sbjct: 292 IQKIIDKSTMEIPEAMIKTQCENMVNEFAQRLAQSGLSMEQYMQFSGLTLDKLEEQVRPE 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ R+ + +VL I + NIEV+EEE+ + + + + K+ ++ ++
Sbjct: 352 AETRIKSSLVLEQIAKDENIEVSEEEIDAEIEKMAKAYGMEADKLKEYMGDAE--KESMK 409
Query: 414 APIFEDKVIDHILKSVQ 430
I K +D ++++V+
Sbjct: 410 RDISVTKAVDLVMENVK 426
>gi|116071739|ref|ZP_01469007.1| trigger factor [Synechococcus sp. BL107]
gi|116065362|gb|EAU71120.1| trigger factor [Synechococcus sp. BL107]
Length = 447
Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats.
Identities = 69/442 (15%), Positives = 176/442 (39%), Gaps = 18/442 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V + + + V +P R T S+ E I + N+ GFR GKVP S + G
Sbjct: 7 KVSTESRPSSRLAVTVTVPGERCTASYEEAITSLSRSINLPGFRKGKVPRSVLVQQLGGV 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++++I + + + +P + D +L L D+
Sbjct: 67 RIKATALEKLIDGAWRDAIKQESLEPISQPDL---SSGFDGLLESFNPGDELTFTLEADV 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVDY 177
P ++ S L+ + D +D + + K E + +
Sbjct: 124 APTPKLKSTKGLKAEYEAVAYDASRVDSMIEDSRKQLATVVPVEGRAAEKGDIAVLGFKG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T S D ++ S ++ + + + E ++G+K G+ K ++ FP+D+ +D G
Sbjct: 184 TYSDDGSEIDGGSADSMDVDLDNGRMIPGFIEGVIGMKVGESKSVDCQFPDDYPKEDARG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K +K++ + +++ A + ++ + +R Q++K +E
Sbjct: 244 RKAAFEIELKDLKTRELPELDDAFAKQASEQDTMADLRKDLEQRLKDDAERRQTSNRNDG 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
++ + + ++PE+L++ E ++++ + + +++ + D +Q A
Sbjct: 304 LVKALVEQLEVELPEALIQQESRNLVEQTAAQFAQQGMDVKSLFTPDLIRNLMQNSRPEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE-LR 413
+ R+ L + E NI++ + + + L + +K + + P L + +
Sbjct: 364 EERLRRSFALTALAEAENIKLDDSAIDTKLNEV-------KKDLSAEAKVDPERLRQAVM 416
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
+ +++++ + + + ++
Sbjct: 417 DDLMQEQLMSWLETNSTLTEKA 438
>gi|291520780|emb|CBK79073.1| trigger factor [Coprococcus catus GD/7]
Length = 448
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 89/450 (19%), Positives = 191/450 (42%), Gaps = 21/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + +P+ + + + ++++ +I GFR GKVP + ++ +YG
Sbjct: 8 MSVQVEKLEHNMAKLTITVPAETFNKAITQAYKKMKNQISIPGFRKGKVPQAMVEKMYGA 67
Query: 61 SI-LSETIDEIIKEIVPEILSK-RDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + + +I E + L++ +D + +P+I + + E D
Sbjct: 68 GMFYEDAANIVIPEEYDKALAEVKDIKITSQPAIDVTQM---------EKGKDFIFTAEV 118
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++ + + ++V ++ EV ++EI+ ++ ++ + N + +E GD V +D+
Sbjct: 119 ATKPEVTLGQYKGIEVPENKVEVTDEEIEAELKKVQEQNAREITVDRPAENGDTVVIDFE 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + E + +N ++GS + LVG E+ FPED+ KDLAGK
Sbjct: 179 GSVDGEVFEGGTAENHPLVLGSGSFIPGFEDQLVGATADSDVEVNVTFPEDYQAKDLAGK 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ E+ +N++ A F++ + + I + E VRQ+ + +I
Sbjct: 239 AAVFKVKVHEIKKKELPEINDEFAQDVSEFDTLDEYKEDVKKGIAEQKEKAVRQEKQEKI 298
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
+ I D+P+ +V + ++ + +M S + L+
Sbjct: 299 IRQIVENAEMDIPDPMVITQTRQMMDQFAQQMQSNGLSMAQYYQFTGLTPDGLLEQMKPQ 358
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ + +VL I I +EEE++ R+ K+ + F ++
Sbjct: 359 AQKNIENRLVLEAIAAAEGITASEEEVEKEFANIAERYGLTVDKVKEIFAD--EETENIK 416
Query: 414 APIFEDKVIDHILKSVQ---IVDRKVTFDQ 440
+ I K +D I ++ + + + T +
Sbjct: 417 SDIAAQKALDMITEAAVEVPVTEVEATVED 446
>gi|332637219|ref|ZP_08416082.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Weissella cibaria KACC 11862]
Length = 429
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 75/434 (17%), Positives = 176/434 (40%), Gaps = 24/434 (5%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILS 64
EG K + +P + + D++ + + GFR GK+P +YG+ +
Sbjct: 7 TKGEGNKGTIKFEVPVDVYEKGIDAAFNDVKKQITVPGFRKGKMPKQVFIQMYGEESLYQ 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
+ ++ ++ ++ + +++ +P I D L ++ P+I
Sbjct: 67 DALNIVLPDVYADAVAEAGVTTVGQPKIDAESMNKD---------EAWVLTAEVELAPEI 117
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNV 184
E+ + ++V V ++E+D ++A + + + + ++ GD V +D+ SVD V
Sbjct: 118 ELGDYKGVKVPASDVTVSDEELDAEIARLQEGQAELVLVDAPAKNGDTVVIDFVGSVDGV 177
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
+ N +GS + LVG K D + FPE++ DLAGK
Sbjct: 178 EFDGGKGDNYSLELGSNSFIPGFEDQLVGAKADDVVNVNVTFPEEYQAADLAGKDALFVV 237
Query: 245 SIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
++ EV + ++++ A ++ + ++ ++ E + + + +
Sbjct: 238 TVHEVKAKEVPALDDEFAKDIDEEVDTLAELKDKVKARLTTEKEDAAKDAKEDAAISAVV 297
Query: 303 NKYTF---DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAK 355
+ + ++P+S++ + + + + M + +++ + Y A+
Sbjct: 298 DNASVAGGEIPDSMIHEDVHRQMNQFFASMQQQGISPELYYQITGSSEDDLHKQYEEGAE 357
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
RRV T +VL I + NI+ T+E++ + + ++ E + L
Sbjct: 358 RRVKTNLVLEAIVKAENIKPTDEDVAAEVKSLADQYGMDEAAVRGALSDD-----MLSHD 412
Query: 416 IFEDKVIDHILKSV 429
I +V+D I+++
Sbjct: 413 IAIKQVVDMIVENA 426
>gi|116872700|ref|YP_849481.1| trigger factor [Listeria welshimeri serovar 6b str. SLCC5334]
gi|123460963|sp|A0AI70|TIG_LISW6 RecName: Full=Trigger factor; Short=TF
gi|116741578|emb|CAK20702.1| trigger factor [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 427
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 89/437 (20%), Positives = 181/437 (41%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG +L I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKQEGNVGKLTFDIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + + P + I E L
Sbjct: 61 EALYQDALDILLPEVYSQAIDEAGIDPVDTPQVNIESM---------EKGETWVLTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV-DYT 178
+ P++++ + L+V + E+ +E++ ++ ++ + VKE + D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V + E+ + ++++LA E+ ++ S+++++ E V Q + +
Sbjct: 232 PVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++ D+P ++V +E + ++ ++ + Q +E
Sbjct: 292 VIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMET 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIE TEE + + ++ + + ++EL
Sbjct: 352 DAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAAL----GDMSEL 407
Query: 413 RAPIFEDKVIDHILKSV 429
++ + K ID +L S
Sbjct: 408 KSDLKIRKAIDVLLDSA 424
>gi|16800374|ref|NP_470642.1| trigger factor [Listeria innocua Clip11262]
gi|21264074|sp|Q92C85|TIG_LISIN RecName: Full=Trigger factor; Short=TF
gi|16413779|emb|CAC96537.1| trigger factor (prolyl isomerase) [Listeria innocua Clip11262]
Length = 427
Score = 187 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 89/437 (20%), Positives = 181/437 (41%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG +L I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + + P + I E L
Sbjct: 61 EALYQDALDILLPEVYSQAIDEAGIDPVDTPQVNIESM---------EKGETWVLTADVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV-DYT 178
+ P++++ + L+V + E+ +E++ ++ ++ + VKE + D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V + E+ + ++++LA E+ ++ S+++++ E V Q + +
Sbjct: 232 PVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEDSVAQAKQEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++ D+P ++V +E + ++ ++ + Q +E
Sbjct: 292 VIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMEK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIE TEE + + ++ + + ++EL
Sbjct: 352 DAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAAL----GDMSEL 407
Query: 413 RAPIFEDKVIDHILKSV 429
++ + K ID +L S
Sbjct: 408 KSDLKIRKAIDVLLDSA 424
>gi|108804375|ref|YP_644312.1| trigger factor [Rubrobacter xylanophilus DSM 9941]
gi|108765618|gb|ABG04500.1| trigger factor [Rubrobacter xylanophilus DSM 9941]
Length = 478
Score = 186 bits (472), Expect = 5e-45, Method: Composition-based stats.
Identities = 88/483 (18%), Positives = 197/483 (40%), Gaps = 22/483 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M E K LDV +P + + ++ ++R + + GFRPGK P +++ G+
Sbjct: 4 MTANVTKLEDNKVRLDVEVPPEAVREGVEAKLRELRKQVRVPGFRPGKAPRRVLETHLGR 63
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I E + E + + D R RP I ++ + + +
Sbjct: 64 DYIYMEALQESLPAWYSRAVIDADIRPIDRPEIHF--------DDPLDEKKGFRFSATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P+ + + L+V + EV E++++ ++ E+ ++ GD V +D+
Sbjct: 116 VRPEARLGEYKGLEVPKREVEVTEEQVEERLEELRGQFATLAAVEDRPVREGDFVILDFK 175
Query: 179 VSVD-NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
L ++ VG +L + + LVG+K G++K+ FP D+ + L G
Sbjct: 176 GERMAGGELPGAEAEDYMLEVGRGELLEDFEKNLVGMKAGERKQFAVTFPMDYREESLRG 235
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ V +KE+ ++++ A FE+ +R +++++ + + + +
Sbjct: 236 QSVLFRVHVKEIKERDLPPLDDEFAKEASEFETLEELRAAIREQLEEAARRRAEGEFRAR 295
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHM 352
+L+ ++ + +VPE +VE++ +++ +S+ K ++ + EE +
Sbjct: 296 VLEAVAERAEVEVPEVMVEDKAEEMVRSFERSVSAQGIKPEDYYRIAGTGREEFKRQVRD 355
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A V +VL + IE EE ++ + +++ ++ A L
Sbjct: 356 DAADTVKKELVLDAVVAAEGIEADEEAVRHEIEHLAEDSGRSPEEVEKSLREN-GTYALL 414
Query: 413 RAPIFEDKVIDHILKSVQIV-----DRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEE 467
R + K +D +++ + V D ++ E E ++ +++ E + EE
Sbjct: 415 REELARQKALDFLVEHARAVPMPPEDEQMPGSGEEPGGGEGVVEARVESAAETEAERDEE 474
Query: 468 APS 470
S
Sbjct: 475 GES 477
>gi|228993214|ref|ZP_04153135.1| Trigger factor [Bacillus pseudomycoides DSM 12442]
gi|228999263|ref|ZP_04158843.1| Trigger factor [Bacillus mycoides Rock3-17]
gi|229006810|ref|ZP_04164443.1| Trigger factor [Bacillus mycoides Rock1-4]
gi|228754432|gb|EEM03844.1| Trigger factor [Bacillus mycoides Rock1-4]
gi|228760460|gb|EEM09426.1| Trigger factor [Bacillus mycoides Rock3-17]
gi|228766540|gb|EEM15182.1| Trigger factor [Bacillus pseudomycoides DSM 12442]
Length = 427
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 82/438 (18%), Positives = 186/438 (42%), Gaps = 21/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MAAKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDETGIFPVAHPEIDIEK---------FEKNENLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELQSLQERQAELVVKEEGTAENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E L+GLK G+ K++E FPE++ ++LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQLIGLKAGESKDVEVSFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ E+ + ++++ A E + ++ +++ + KV+ +
Sbjct: 232 PATFKVTVHEIKAKELPALDDEFAKDADEEVATLEELKAKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ ++ ++PE+++E E + ++++ +S + ++ +
Sbjct: 292 VVEKAADNAEIEIPEAMIETELDRMIREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + +L L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAAMYNMPVDAITQAL----GSLDAL 407
Query: 413 RAPIFEDKVIDHILKSVQ 430
I K +D ++ + +
Sbjct: 408 SEDIKVRKAVDFLVDNSK 425
>gi|312128166|ref|YP_003993040.1| trigger factor [Caldicellulosiruptor hydrothermalis 108]
gi|311778185|gb|ADQ07671.1| trigger factor [Caldicellulosiruptor hydrothermalis 108]
Length = 438
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 92/441 (20%), Positives = 197/441 (44%), Gaps = 17/441 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K ++V + + + + + I GFRPGK P S I+ YG+
Sbjct: 1 MEFKIEKKGTNKAIIEVEVEAEKFEEGLQKSYLKNAKYFKIPGFRPGKAPRSLIERAYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ID ++ E P+++ + +P + I + +
Sbjct: 61 EVFYDDAIDYVLNETYPKVIEESKLEVVSKPEVDIVQVG---------KGKSFIYKAEVY 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ + +++ + V E+E++ ++ + + N F E E GD VT+D+
Sbjct: 112 VKPEFELGQYKGIEIKKIEYPVAEEEVEHELEHLREENARFVPVEREVMQGDIVTIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD ++ + ++ + +GS E ++G+ G++KEIE FPED+ LAGKK
Sbjct: 172 FVDGEPIKGGAAQDYELTIGSNAFIPGFEEQIIGMNKGEEKEIEVTFPEDYQEPSLAGKK 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+K++ ++++ A FE+ ++ +IK+ ++ + ++ IL
Sbjct: 232 ATFKVKVKDIKVKELPELDDEFAKDVSEFETLEELKASIRNRIKEKNDQRAKDEMIDAIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
+ I+ + D+PE ++EN+ N ++ V + Q + D+E + A
Sbjct: 292 EKIAQNTSIDIPEPMIENQINYYVEDVARNLQYFGMTYERYLQAIGKTDKEFRSQFRERA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V ++L I + NI+ T+EE+Q L + + K+ + + + ++
Sbjct: 352 EKAVRNNLILEKIAKVENIQATDEELQKELERLAKMYNLEVDKLKERLSEDD--IEYIKE 409
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
I +K ID I ++ +I+ +
Sbjct: 410 GIILNKAIDFIYENAKIISEE 430
>gi|226324365|ref|ZP_03799883.1| hypothetical protein COPCOM_02146 [Coprococcus comes ATCC 27758]
gi|225206813|gb|EEG89167.1| hypothetical protein COPCOM_02146 [Coprococcus comes ATCC 27758]
Length = 430
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 84/436 (19%), Positives = 179/436 (41%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + L + + + +S+ N+ GFR GKVP I+ +YG
Sbjct: 3 MSLQVEQLEHNMAKLTIEVSAEELEGALQKAYQKQKSRINVPGFRKGKVPRQLIEKMYGP 62
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + +I E + + +P I + + IE
Sbjct: 63 EIFYDDAANALIPEAYSKAYDESGLEIVSQPKIDVTQ---------IEKGKPFIFTAEVA 113
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
P++E+ + ++V + V +KEID ++ E N V+ + D+V +D+
Sbjct: 114 TKPEVELGEYKGIEVPKYSNRVTQKEIDAKLEEEQLKNARTITVEGRPVQDKDEVVLDFE 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E L+G + + E++ FPED+ +DL GK
Sbjct: 174 GFVDGEAFEGGKGENYPLTIGSGSFIPGFEEQLIGAEPEKEVEVKVTFPEDYHAEDLKGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ E+ + ++++ A F++ ++ KIK+ ++ +
Sbjct: 234 EAVFKCTVHEIKAKELPELDDEFASEVSEFDTLDELKTDIKAKIKEQKVNDGKRAQEDAA 293
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+D I D+PE++V+ + +L + M Q Q ++ +
Sbjct: 294 VDAIIESAKMDLPEAMVDTQARQMLDEFAQRMQQQGLTLDQYMQFTGMTADKMMDELRPQ 353
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++R+ T +VL I + NIE+T+E++ + + + K+ +++
Sbjct: 354 AEKRIKTRLVLEAIAKAENIEITDEKLDEEIAKMAEAYQMEADKLKSFMGDKE--KEQMK 411
Query: 414 APIFEDKVIDHILKSV 429
+ + I ++ +
Sbjct: 412 QDMAVQEAITFVVDNA 427
>gi|318043034|ref|ZP_07974990.1| trigger factor [Synechococcus sp. CB0101]
Length = 472
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 70/468 (14%), Positives = 182/468 (38%), Gaps = 16/468 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+V G + +++ +P+ S + +E + + GFR GKVP + + G +
Sbjct: 14 KVSTSPRPGSRMAVEIGVPAGLTQTSHEQAVEKLSRTIKLPGFRKGKVPRAVLVQQIGAA 73
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++E++ + L + + A +PS+ G + E +L L L D+
Sbjct: 74 RIRATALEELVDNVFRNALKQAEIPAIGQPSVD---GGFEALLERFEPGQELSLTLEMDV 130
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVDY 177
P + S L+ + D +D + + + E + ++
Sbjct: 131 EPTPSLKSTKGLKAEAEAVSFDAARVDELIEQSRRQLATLVPVEKRAAEQGDVAVISFSG 190
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T + + + S + ++ + + E ++G+K GD K + FPE++ +D AG
Sbjct: 191 TFTDNGEAISGGSAEAMEVELEDGRMIPGFVEGIIGMKPGDSKTVACQFPEEYPQEDAAG 250
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K S+ E+ + +++ A + + + + +R +++K+ +E
Sbjct: 251 RKASFEISLSELKTRELPALDDAFAQQASDKQTLAELRADLEERLKEDAERRNESNRHDA 310
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
+L + + ++PE+LV+ E +L++ +++ + + + + + A
Sbjct: 311 LLAALVEQLEVELPETLVQEEIISLLEQTAGQLAQQGMDVKKLFTPQLIQSLRETSRPEA 370
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ R+ + L + IEV +E+++ + + F + + ++
Sbjct: 371 EERLKRSLALKALATAEKIEVAADEIEAKVKELSRGFSDNSR------IDPARLRQAVQE 424
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVET 462
+ +K++ + + I ++ + + + E
Sbjct: 425 DLMREKLMGWLESNSTITEKAADTAEAKPKKAAAKKGSSKKAEPAAEA 472
>gi|325066960|ref|ZP_08125633.1| trigger factor [Actinomyces oris K20]
Length = 447
Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats.
Identities = 80/443 (18%), Positives = 180/443 (40%), Gaps = 26/443 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + +L V +P L S + ++I S+ + GFR G VP I G+
Sbjct: 1 MKTTVENLDPSRIKLTVEVPYEELKPSLDAAYKEIGSQIQVPGFRRGHVPNRVIDQRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + + + +++ + ++P + + E + + E L
Sbjct: 61 GTVIQEAVNNKLSDFYRDAITEAERVPMLQPEVDVVE----LPNATGENGGQLAFTAEVT 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P IE+ ++T D EV ++++D ++ + + + +++ GD VT+D
Sbjct: 117 VRPVIELPDLSKAKLTVDAVEVTDEDVDTELDNLRARFGSLKSVGRKAKTGDFVTIDLKA 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S V + +G ++ L GLKT + F + + + AG++
Sbjct: 177 VIDGEEVDSISG--VSYEIGKGNMLKGLDTALRGLKTDE----SATFTTELAGGEHAGEQ 230
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V V+++ A F++ +R +++ + + +L
Sbjct: 231 AEVTVTATAVKQRELPKVDDEFAQLASEFDTVEELREDLVKQVTERKTGEQAVAARDALL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+++ ++ FDVPE++VE E L+ DEE + V
Sbjct: 291 EHLRSEVAFDVPEAVVEAEVAQHLR-------------AEGKDGDEEHAKEIREDIVNGV 337
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L + E + V ++E+ L+Q ++ + L Q+ + + +
Sbjct: 338 RDQIILDVLAEDLKVGVAQDELLEFLFQTAQQYGMEPAQFLQGAQQ-AGQIPAFVSEVAR 396
Query: 419 DKVIDHILKSVQIVDRKVTFDQL 441
+K + L+ +VD K L
Sbjct: 397 NKSLAMALRQAAVVDSKGETVDL 419
>gi|152976888|ref|YP_001376405.1| trigger factor [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|189035929|sp|A7GTF2|TIG_BACCN RecName: Full=Trigger factor; Short=TF
gi|152025640|gb|ABS23410.1| trigger factor [Bacillus cytotoxicus NVH 391-98]
Length = 427
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 79/438 (18%), Positives = 183/438 (41%), Gaps = 21/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + S + + + N+ GFR GK+P + +G
Sbjct: 1 MAAKWEKLEGNVGVLTIEVDAKEVNKSLDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYSEAIDETGIFPVAHPEIDIEK---------FEKNENLVFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKIDTTVTDEDVENELKALQERQAELVVKEDGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V+ E +N +GS E L+GLK G+ K++E FPE++ ++LAGK
Sbjct: 172 GFVNGEAFEGGKGENYSLAIGSGTFIPGFEEQLIGLKAGESKDVEVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ E+ + +N++ A + E + ++ +++ + KV+ +
Sbjct: 232 PATFKVTVHEIKAKELPELNDEFAKDVNEEVATLDELKAKLRTDLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + D+PE+++E E + ++++ +S + ++ +
Sbjct: 292 VVEKAAANAEIDIPEAMIETELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I + NIEV EEE+ + + + + + + L
Sbjct: 352 DAQKRVRINLVLEAIIKAENIEVAEEEVNAEIEKMAEMYNMPVDAIKQAL----GSAEAL 407
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ K +D ++ + +
Sbjct: 408 AEDLKVRKAVDFLVDNSK 425
>gi|315604697|ref|ZP_07879760.1| trigger factor [Actinomyces sp. oral taxon 180 str. F0310]
gi|315313709|gb|EFU61763.1| trigger factor [Actinomyces sp. oral taxon 180 str. F0310]
Length = 439
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 79/469 (16%), Positives = 189/469 (40%), Gaps = 38/469 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E K L V +P L ++ ++I + NI GFR G VP I +G+
Sbjct: 1 MKSTVETLEPTKVRLTVEVPYEELKSEMDKAYKEIAGQVNIPGFRKGHVPPRIIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ ++ + +++++ + +++ D R +P + + E I + L
Sbjct: 61 AAVIEQVVNQVLPGHYSDAVNQNDLRPLAQPEVDVTE----IPAVTGPQGGQLVFTAEVA 116
Query: 120 ILPQIEISSFDD-LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
++P E+ DD L V + EV ++++++++ ++ + +++ GD T+D
Sbjct: 117 VVPAFELPDIDDSLVVEVEPTEVTDEDVEKELDDLRSRFATLKTINRKAKTGDFATIDLV 176
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D ++ S +V + +GS + L G K G++ F D G+
Sbjct: 177 ATIDGKEVD--SASDVSYEIGSGSMLDGQDTALRGTKAGEE----VSFTSKLKGGDHEGE 230
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + ++K + + ++D A F++ + ++ + E + +
Sbjct: 231 EAEVTITVKAMKARELPKADDDFAQMVSEFDTIEELTEDLKKQAASNKESKQALAARDAL 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
++ + +K +PES V+++ + + + + ++
Sbjct: 291 INVLLDKVEIILPESAVDHQVEHRVGEDAK----------------PKAKKEARAAVEKE 334
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ T ++ + +K +++V+++E+ Q F ++ P +A + A +
Sbjct: 335 IRTELLSEALAKKFDVQVSQQELIDYAIQMSQNFGVD----INQLFSSPQQMANVVADLG 390
Query: 418 EDKVIDHILKSVQIVDR---KVTFDQLFD--NSSESSPEKLLDKSSKVE 461
K + LK V + D V + F +SE E + D + E
Sbjct: 391 RSKALIEALKLVSVKDTNGQDVDLSKFFGTDPASEEGAEIVTDSADDKE 439
>gi|258646879|ref|ZP_05734348.1| trigger factor [Dialister invisus DSM 15470]
gi|260404318|gb|EEW97865.1| trigger factor [Dialister invisus DSM 15470]
Length = 491
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 89/479 (18%), Positives = 187/479 (39%), Gaps = 20/479 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + K +L + +P+ + F + + I ++ I GFR GK P I+ +GK
Sbjct: 1 MNVKAEALDQHKVQLTIDVPAEVVVKGFKQAVARIANQVKIPGFRKGKAPRRIIEMHFGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E D +I + + + + + A P + T ++
Sbjct: 61 EAVAGEAQDIVINQALNDAIMQEKLIAVTTPEV---------KQERFSETEGAAFTATFV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDY 177
P++++ + L E+ + ++ Q+ + A+ N E E + + GD +D+
Sbjct: 112 KQPKVKLGEYKGLSAKHVKPEISDDQVMAQIRQAAEQNARMEKAEEGTVLKKGDIAVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+VD E K +GS + L G K GD + FP+D+ + LAG
Sbjct: 172 KGTVDGKAFEGGEGKTYPLEIGSKSFIPGFEDQLEGHKAGDDVTVSVSFPKDYFVDTLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ I +V + V+++ A E+ ++ Q+++ + + +
Sbjct: 232 KEAEFAVHINDVKHKVIPVIDDAFAKSVSRHETLDELKESLKQQMQLRAFQQAEEAYHQS 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ----NVDSIDEEDLQYYHM 352
+++ D+P+ +V+ + I Q+V+ M + N+ +EE Q Y+
Sbjct: 292 LINQAVANSKVDIPQEMVDQRIDEIEQEVKLNMEAQGMDFDKYLSNMGKSEEEFRQSYNK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+++V G+VL I +E T +++ +Y +F K ++ + N L
Sbjct: 352 TAEQQVREGLVLAEIANVEKLEATNQDLNMEVYSMARQFNAEPKDVIKIIR-DENRAGML 410
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ K I + V + ++ + + EK + + + E
Sbjct: 411 YNSVLRKKAAAFIYGAA--VKEESKKEETAKKTEAPAKEKKESPLAAKTVKELKAYAEE 467
>gi|313114090|ref|ZP_07799642.1| trigger factor [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623499|gb|EFQ06902.1| trigger factor [Faecalibacterium cf. prausnitzii KLE1255]
Length = 438
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 75/436 (17%), Positives = 181/436 (41%), Gaps = 20/436 (4%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
+ + E EL I + + + + K + GFR GK P + I+ +YG +
Sbjct: 4 IKCEKLEKSMAELQFSIDAEAFKKAVADVFKKEGKKYAVPGFRKGKAPRALIEKMYGADV 63
Query: 63 L-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ I+E+ E + + RP +T++ + T + L + +
Sbjct: 64 FTYDAINELFPEAFEAAVKEAGVEPVGRPEVTVDSA---------DETNGVTLTVKVAVK 114
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++++ S++ L V + + V ++ ++ ++ + + N +E +E GD +D+ V
Sbjct: 115 PEVKVGSYNGLTVEKTVHTVSDEAVEAELKRVQERNARELTREGAAENGDIADIDFEGFV 174
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V E ++ +GS + +VG G++ ++ FP ++ +LAGK
Sbjct: 175 DGVAFEGGKAEHYSLTLGSGSFIPGFEDQIVGHSAGEEFDVNVTFPTEYQAAELAGKAAV 234
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ EV ++++LA +++ + + ++ + V+ ++D
Sbjct: 235 FKIKLHEVKYKELPALDDELAKDCSEYDTLDEFKASIRKNNQEQLDKQDDLAVENALVDQ 294
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAKR 356
+ ++P+++ + + ++ F + + ++ E+ + A++
Sbjct: 295 VIESMEGEIPQAMYDARMDEMVNDFAFRVEQQGLRLEDYLKYMGQTMEQFRASFMPQAEK 354
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V + L + NIE +EEE+ + + + ++ E K+ + + +L+ +
Sbjct: 355 QVKIRLALEAVAAAENIEASEEEVSAEIKRIADQYKMEENKVRELVN-----VDDLKKDL 409
Query: 417 FEDKVIDHILKSVQIV 432
+K ID I IV
Sbjct: 410 AINKAIDFIKSHANIV 425
>gi|94502069|ref|ZP_01308573.1| trigger factor [Oceanobacter sp. RED65]
gi|94425780|gb|EAT10784.1| trigger factor [Oceanobacter sp. RED65]
Length = 348
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 87/362 (24%), Positives = 168/362 (46%), Gaps = 16/362 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + GL+R+L + IP++ + +R++ + A I GFR GK+P+ I+ YGK
Sbjct: 1 MQVSVETLSGLERKLVIDIPADTVEQEIAKRLQQVSKTARIDGFRQGKIPMRVIRQRYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + E +++ + + + A PS+ + E D + +++I
Sbjct: 61 GVRQEVLGEQMQQGFIQAVQQEKLNPAGMPSVEPV---------VDEEGKDFQFSATFEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++EI + ++V + EV +++++ + + K F+ + S+ GD+V +D+
Sbjct: 112 YPEVEIKDVEKIEVEKLAAEVKDEDLENMIDILRKQQADFKEVDAASKDGDRVKIDFEGF 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E S + ++GS + + +VG+K GD+K I+ FPED++ ++L GK
Sbjct: 172 VDGEAFEGGSAEGHALVLGSNSMIPGFEDQIVGMKAGDEKTIKVTFPEDYNAENLKGKDA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ V +N + G E E+ R + +++ + V++ K Q+L
Sbjct: 232 EFKIKVHTVEESELPELNEEFFKAFGVEASDEAEFRSEVRKNMERELKQAVQRNTKNQVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + DVP +L++ E + Q+ + Q S D + + A RRV
Sbjct: 292 DGLIQTNEVDVPAALIDQEIGRLQQQAVQQFGGGQQ-----ISPDMLPKELFKDQADRRV 346
Query: 359 LT 360
Sbjct: 347 KL 348
>gi|227529060|ref|ZP_03959109.1| cell division trigger factor [Lactobacillus vaginalis ATCC 49540]
gi|227351072|gb|EEJ41363.1| cell division trigger factor [Lactobacillus vaginalis ATCC 49540]
Length = 445
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 79/450 (17%), Positives = 188/450 (41%), Gaps = 24/450 (5%)
Query: 1 MQVIEK-FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M + S+ K L I + + +E + + K + GFR G+VP +YG
Sbjct: 8 MSAKWERDSDASKGTLTFEIDVDTIKKGLDEAFVETKKKITVPGFRKGRVPRQIFDQMYG 67
Query: 60 KS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + + +++++ + + + + +P I I + D L S
Sbjct: 68 EESLYQDALNKVLPQAYSDAVKEAGIEPVAQPQINIKSMDKD---------QPWVLTASV 118
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDY 177
D+ P++++ + ++V + V + ++D ++ + + +KE + D V +DY
Sbjct: 119 DVKPEVKLGDYKGMEVPKQDTTVSDADVDAELEKKRQQQAELVLKEGKPAEKGDTVVIDY 178
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
S+D + S N +GS + L+G T D +++ FPED+ KDLAG
Sbjct: 179 EGSIDGKKFDGGSADNYSLELGSGSFIPGFEDQLIGHNTDDDVDVKVTFPEDYHAKDLAG 238
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K+ + E+ +++D A ++ + ++ ++++++ + + ++
Sbjct: 239 KEAIFKVKVHEIKEKQLPELDDDFAKDVDEDVDTLAELKDKTKKELQENKDNQAKAAIED 298
Query: 296 QILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYY 350
++ D+P+S+++ + N +Q+ M Q +++ + +
Sbjct: 299 AAINAAVENAEIQDIPQSMLDEDTNRQMQQYLAGMQQQGISPQMYFQITGTKEDDLKKQF 358
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A +RV T +VL I + ++ TE+E++ + ++ E ++ + +
Sbjct: 359 AADAAQRVKTNLVLEAIVDDADLSATEDEIKDEISDLAKQYGMKEDQVKNALSED----- 413
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
L I K +D + S + V++ +
Sbjct: 414 MLTHDIKIRKAVDLVADSAKQVEKADDKKE 443
>gi|75909810|ref|YP_324106.1| trigger factor [Anabaena variabilis ATCC 29413]
gi|119370880|sp|Q3M725|TIG_ANAVT RecName: Full=Trigger factor; Short=TF
gi|75703535|gb|ABA23211.1| Trigger factor [Anabaena variabilis ATCC 29413]
Length = 471
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 84/485 (17%), Positives = 188/485 (38%), Gaps = 33/485 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + L++ I ++ + I+++ NI GFR GKVP + GK
Sbjct: 1 MKVTQEKLPASQIGLEIEITPEITQKTYEQVIKNLSRTVNIPGFRKGKVPRQVLLQRLGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + ++E++++ + + + + A +P + D E L + D
Sbjct: 61 THIKAAALEELLQDGIEQAIKQESIAAIGQPRL---RSSFDDLINSYEPGQPLTFTAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--------ETESEIGD 171
+ P+I + + L+ + + D +D + + + +
Sbjct: 118 VEPEINLVQYTGLEAKAEEIKYDPARVDEVLEKERQELATLIPVEGRAAQIGDVAVVDFK 177
Query: 172 KVTVDYTVSVDN---VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPE 228
V +N + + Q + +VG+ GD KE+ FP+
Sbjct: 178 GVIAKAEGDDENAEPEPIPGGDASDFQVELQEDKFIPGFVTGIVGMNPGDTKEVSAQFPD 237
Query: 229 DHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEF 287
+ ++LAGK ++KE+ +N+D A F++ A+R +++ ++ +E
Sbjct: 238 PYVNQELAGKPAIFTVTLKEIKEKELPELNDDFAQEVSDFDTLEALRASLAERYQKEAED 297
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EE 345
+ + +L + D+PE+L+E E + +L + +S + + + D +
Sbjct: 298 KTKNNQQEALLGELVKHIEVDLPETLIEKEVDAMLTQTAMRLSQQGLDVKKLFTQDIIPQ 357
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ A R+ + L + ++ +I VT EE+Q+ + + + ++P + +
Sbjct: 358 LRERSRPEAVERLKRSLGLQEVAKRESIAVTPEEIQARVTELVQQYPDEDIDV------- 410
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ + +K+ID +L + I +L S +S E +
Sbjct: 411 ERLHTIVENELLSEKIIDWLLANSTI--------ELVPEGSLASQESEITAPETEAETIE 462
Query: 466 EEAPS 470
A S
Sbjct: 463 VTAES 467
>gi|229032127|ref|ZP_04188104.1| Trigger factor [Bacillus cereus AH1271]
gi|228729183|gb|EEL80182.1| Trigger factor [Bacillus cereus AH1271]
Length = 425
Score = 186 bits (471), Expect = 7e-45, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 184/437 (42%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MATKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVQTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ID I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDAIDIILPKAYGEAIDEAGIFPVDHPEINIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKSLQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+GD K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGDSKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I E+ + +N++ A + ++ +++ + KV+ +
Sbjct: 232 PATFKVTIHEIKTKELPELNDEFAKEADEAVATLDELKTKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + ++PE++++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIEIPEAMIDTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++++
Sbjct: 408 AEDLKVRKAVDFLVENA 424
>gi|225874970|ref|YP_002756429.1| trigger factor [Acidobacterium capsulatum ATCC 51196]
gi|225793968|gb|ACO34058.1| trigger factor [Acidobacterium capsulatum ATCC 51196]
Length = 472
Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats.
Identities = 76/433 (17%), Positives = 188/433 (43%), Gaps = 20/433 (4%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSE 65
+ R+++V IP++ ++ +F ++ I+ +A I GFR GKVP + +++ + +I E
Sbjct: 48 TLNPECTRDVEVEIPADEVSKAFRSVLKKIQKQARIPGFRAGKVPETILRNRFQDTIQQE 107
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
++ ++ + + + +P +T ++ L+ + ++++P+
Sbjct: 108 VVETVLPHHFRAAIDAKGLQPISQPQVT---------ELHLKDGDPLRFKAVFEVMPEFS 158
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYTVSVDN 183
+ + D++V + + + E D ++ I + E ++ GD + + +
Sbjct: 159 VDGYQDIKVEKADAALTDAEFDEELKRIIDSRSTMEPVTEDRALADGDFAQITFQGQIAG 218
Query: 184 VILEDQSKKNV------QFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
E ++ VG + +E L G K G + + E +P + + LAG
Sbjct: 219 EEAEGENADQPIEGQDVMVEVGGTNTLPAFSESLRGAKPGQELKFEVAYPAEFGEQRLAG 278
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K V + ++ + + + +N++ A +ES + + + + V + + +
Sbjct: 279 KTVAYDVTVNGIKTRVQPELNDEFAKELGEYESFDDFKQKLREHMTEEKARRVESETRNK 338
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-EEDLQYYHMLAK 355
++D ++ F VPESLV+++ + L + +++ +++++ +D + H A+
Sbjct: 339 LIDAYVERFQFPVPESLVQSQIDARLDRGLRALAAQGMRTEDMRKLDFARLREGQHAGAQ 398
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
V ++L I + +EV+EEE+ L+ + +L LA +R
Sbjct: 399 AEVKGTLILDKIADAEKVEVSEEELDKELFMLSVQM-QEPVDVLRSRLTSEGNLARIREQ 457
Query: 416 IFEDKVIDHILKS 428
I +K +++
Sbjct: 458 IRREKTGKMLVEK 470
>gi|217964590|ref|YP_002350268.1| trigger factor [Listeria monocytogenes HCC23]
gi|290894516|ref|ZP_06557469.1| trigger factor [Listeria monocytogenes FSL J2-071]
gi|254789007|sp|B8DHN8|TIG_LISMH RecName: Full=Trigger factor; Short=TF
gi|217333860|gb|ACK39654.1| trigger factor [Listeria monocytogenes HCC23]
gi|290555928|gb|EFD89489.1| trigger factor [Listeria monocytogenes FSL J2-071]
gi|307570846|emb|CAR84025.1| trigger factor [Listeria monocytogenes L99]
gi|313609091|gb|EFR84800.1| trigger factor [Listeria monocytogenes FSL F2-208]
Length = 427
Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats.
Identities = 89/437 (20%), Positives = 180/437 (41%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG +L I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + P + I E L
Sbjct: 61 EALYQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESM---------EKGETWVLTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV-DYT 178
+ P++++ + L+V + E+ +E++ ++ ++ + VKE + D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V + E+ + ++++LA E+ ++ S+++++ E V Q + +
Sbjct: 232 PVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++ D+P ++V +E + ++ ++ + Q +E
Sbjct: 292 VIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMEK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIE TEE + + ++ + + ++EL
Sbjct: 352 DAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAAL----GDMSEL 407
Query: 413 RAPIFEDKVIDHILKSV 429
++ + K ID +L S
Sbjct: 408 KSDLKIRKAIDVLLDSA 424
>gi|326203842|ref|ZP_08193704.1| trigger factor [Clostridium papyrosolvens DSM 2782]
gi|325985940|gb|EGD46774.1| trigger factor [Clostridium papyrosolvens DSM 2782]
Length = 428
Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats.
Identities = 74/439 (16%), Positives = 181/439 (41%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E +L++ + + + + + + SK N+ GFR GK P + I+ YG+
Sbjct: 1 MKVKVENVEKNVVQLEIEVDAAKFEEGMQQSYKKNVSKFNVPGFRKGKAPRNIIERYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + I+ + E + + + + RP I I + I +L
Sbjct: 61 QALYDDAINIVCSEAYDNAIEENNIQPVDRPEIDIVQ---------IGNKENLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++E+ ++ ++V + V +++++ + ++ + N + + GD +D+
Sbjct: 112 VKPEVELGAYMGVEVKKAEVNVTDEDVENEFNKVVEKNARLVSVTDRPIQSGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D+V E ++ ++GS + L+G D ++ FPE++ +DL GK
Sbjct: 172 GFIDSVPFEGGKGEDYSLVIGSGTFIPGFEDQLIGKNVADDVDVNVTFPEEYGKEDLNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +KE+ V+++ A F++ + K+++ ++ + + +
Sbjct: 232 EALFKVLVKEIKVKELPAVDDEFAKDISEFDTLEEYKTDLRNKLEESAKNKAERDNEESV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ + T DVP +VE + + + + Q + E + +
Sbjct: 292 IQAVVGNATVDVPNVMVEKHIDAMARDFDMRLRYQGLDLQRYMEMMGTDFEGFREQFRER 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A V +V+ IG+ N+E T+ +++ + + + +++ + P L ++
Sbjct: 352 AANEVKIQLVVEKIGQVENVEATDADVEEEITKTAEAYKQPAEELKKTLR--PEDLEYVK 409
Query: 414 APIFEDKVIDHILKSVQIV 432
I K I + + +
Sbjct: 410 NDIAFRKTIKLLTDNAKFN 428
>gi|16803307|ref|NP_464792.1| trigger factor [Listeria monocytogenes EGD-e]
gi|46907493|ref|YP_013882.1| trigger factor [Listeria monocytogenes serotype 4b str. F2365]
gi|47093915|ref|ZP_00231654.1| trigger factor [Listeria monocytogenes str. 4b H7858]
gi|47097409|ref|ZP_00234958.1| trigger factor [Listeria monocytogenes str. 1/2a F6854]
gi|224499061|ref|ZP_03667410.1| trigger factor [Listeria monocytogenes Finland 1988]
gi|224501787|ref|ZP_03670094.1| trigger factor [Listeria monocytogenes FSL R2-561]
gi|226223870|ref|YP_002757977.1| trigger factor (prolyl isomerase) [Listeria monocytogenes
Clip81459]
gi|254824672|ref|ZP_05229673.1| trigger factor [Listeria monocytogenes FSL J1-194]
gi|254828630|ref|ZP_05233317.1| trigger factor [Listeria monocytogenes FSL N3-165]
gi|254829976|ref|ZP_05234631.1| trigger factor [Listeria monocytogenes 10403S]
gi|254852679|ref|ZP_05242027.1| trigger factor [Listeria monocytogenes FSL R2-503]
gi|254898568|ref|ZP_05258492.1| trigger factor [Listeria monocytogenes J0161]
gi|254911942|ref|ZP_05261954.1| trigger factor [Listeria monocytogenes J2818]
gi|254932416|ref|ZP_05265775.1| trigger factor [Listeria monocytogenes HPB2262]
gi|254936268|ref|ZP_05267965.1| trigger factor [Listeria monocytogenes F6900]
gi|254992850|ref|ZP_05275040.1| trigger factor [Listeria monocytogenes FSL J2-064]
gi|255520249|ref|ZP_05387486.1| trigger factor [Listeria monocytogenes FSL J1-175]
gi|284801652|ref|YP_003413517.1| trigger factor [Listeria monocytogenes 08-5578]
gi|284994794|ref|YP_003416562.1| trigger factor [Listeria monocytogenes 08-5923]
gi|300765303|ref|ZP_07075287.1| trigger factor [Listeria monocytogenes FSL N1-017]
gi|21264070|sp|Q8Y7L0|TIG_LISMO RecName: Full=Trigger factor; Short=TF
gi|67461800|sp|Q720F5|TIG_LISMF RecName: Full=Trigger factor; Short=TF
gi|259533622|sp|C1L2H5|TIG_LISMC RecName: Full=Trigger factor; Short=TF
gi|16410683|emb|CAC99345.1| trigger factor (prolyl isomerase) [Listeria monocytogenes EGD-e]
gi|46880761|gb|AAT04059.1| trigger factor [Listeria monocytogenes serotype 4b str. F2365]
gi|47014208|gb|EAL05192.1| trigger factor [Listeria monocytogenes str. 1/2a F6854]
gi|47017701|gb|EAL08495.1| trigger factor [Listeria monocytogenes str. 4b H7858]
gi|225876332|emb|CAS05041.1| trigger factor (prolyl isomerase) [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|258601029|gb|EEW14354.1| trigger factor [Listeria monocytogenes FSL N3-165]
gi|258605997|gb|EEW18605.1| trigger factor [Listeria monocytogenes FSL R2-503]
gi|258608857|gb|EEW21465.1| trigger factor [Listeria monocytogenes F6900]
gi|284057214|gb|ADB68155.1| trigger factor [Listeria monocytogenes 08-5578]
gi|284060261|gb|ADB71200.1| trigger factor [Listeria monocytogenes 08-5923]
gi|293583973|gb|EFF96005.1| trigger factor [Listeria monocytogenes HPB2262]
gi|293589903|gb|EFF98237.1| trigger factor [Listeria monocytogenes J2818]
gi|293593911|gb|EFG01672.1| trigger factor [Listeria monocytogenes FSL J1-194]
gi|300513986|gb|EFK41049.1| trigger factor [Listeria monocytogenes FSL N1-017]
gi|328468557|gb|EGF39557.1| trigger factor [Listeria monocytogenes 1816]
gi|328475112|gb|EGF45896.1| trigger factor [Listeria monocytogenes 220]
gi|332311712|gb|EGJ24807.1| Trigger factor [Listeria monocytogenes str. Scott A]
Length = 427
Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats.
Identities = 89/437 (20%), Positives = 180/437 (41%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG +L I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + P + I E L
Sbjct: 61 EALFQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESM---------EKGETWVLTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV-DYT 178
+ P++++ + L+V + E+ +E++ ++ ++ + VKE + D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V + E+ + ++++LA E+ ++ S+++++ E V Q + +
Sbjct: 232 PVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++ D+P ++V +E + ++ ++ + Q +E
Sbjct: 292 VIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMEK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIE TEE + + ++ + + ++EL
Sbjct: 352 DAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAAL----GDMSEL 407
Query: 413 RAPIFEDKVIDHILKSV 429
++ + K ID +L S
Sbjct: 408 KSDLKIRKAIDVLLDSA 424
>gi|229098947|ref|ZP_04229882.1| Trigger factor [Bacillus cereus Rock3-29]
gi|229105112|ref|ZP_04235763.1| Trigger factor [Bacillus cereus Rock3-28]
gi|229117976|ref|ZP_04247336.1| Trigger factor [Bacillus cereus Rock1-3]
gi|228665425|gb|EEL20907.1| Trigger factor [Bacillus cereus Rock1-3]
gi|228678293|gb|EEL32519.1| Trigger factor [Bacillus cereus Rock3-28]
gi|228684445|gb|EEL38388.1| Trigger factor [Bacillus cereus Rock3-29]
Length = 425
Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 184/437 (42%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MAAKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDEAGIFPVAHPEIDIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENEVKALQERQAELVVKEEGTIENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+G+ K++E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGESKDVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I E+ + +N++ A E + ++ +++ + KV+ +
Sbjct: 232 PATFKVTIHEIKTKELPELNDEFAKEADEEVATLDELKTKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + D+PE++++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIDIPEAMIDTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + + L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSADAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++++
Sbjct: 408 SEDLKVRKAVDFLVENA 424
>gi|289577853|ref|YP_003476480.1| trigger factor [Thermoanaerobacter italicus Ab9]
gi|289527566|gb|ADD01918.1| trigger factor [Thermoanaerobacter italicus Ab9]
Length = 432
Score = 185 bits (470), Expect = 9e-45, Method: Composition-based stats.
Identities = 86/442 (19%), Positives = 194/442 (43%), Gaps = 18/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K E +++ IPS + + N + SK N+ GFR GK P ++ YG+
Sbjct: 1 MGVSLKKLEKSVATIELTIPSEKFEEGLNFAFKKNASKFNVPGFRRGKAPRVIVERYYGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ + E E L + + P I I + I DL L +
Sbjct: 61 GVLYEDAVEYVFDEAYNEALKTFNLQPVDYPHIHILQ---------IGKGKDLILEATVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYT 178
++P++E+ + +++ + +V + +++ ++ ++ + N E +E GD +D+
Sbjct: 112 VMPEVELGEYKGIEIEKIEYDVYDGDVEYELEKLRQQNARIVPVEGRAAERGDIAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D+ E +N Q +GS + ++G + ++ FPED+ +++L GK
Sbjct: 172 GFIDDEPFEGGKAENYQLELGSNTFIPGFEDQIIGHNVNENFDVNVTFPEDYRVEELRGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A FE+ ++ +K+++ + ++K +
Sbjct: 232 SAAFKVTLKALNKKELPELDDEFAKDVSEFETIDELKADIRKKLEERNRQQAENEMKEKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+ + D+P+++VE + + L+++ + + + E+ +
Sbjct: 292 VMKVVENAKVDIPDAMVERQIDASLRELDYNLRYQGLDLDRYLSITGKTLEDLRKEMWEG 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A RV T +V+ I + NIE TEEE+++ L + + + ++ + + ++
Sbjct: 352 ALNRVKTQLVIDKIAKIENIEATEEELENKLKEMAANYRINLEEFKKSL--TESQINSIK 409
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I K ID I +I+ ++
Sbjct: 410 EDIAYYKTIDFIFSQCKIISKE 431
>gi|330878765|gb|EGH12914.1| trigger factor [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 231
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 65/238 (27%), Positives = 120/238 (50%), Gaps = 9/238 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + L+R + + +P+ R+ N+R++ KA I GFRPGKVP+S I+ Y
Sbjct: 1 MQVSVENTSALERRMTIGVPAERIETEVNKRLQQTARKAKIPGFRPGKVPMSVIRQRYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E + ++I+ E + ++ A P++ E DL+ ++++
Sbjct: 61 GARQEALGDLIQATFYEAVVEQKLNPAGAPAVEPKS---------FEKGKDLEYVATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ FD + V + +V + ++D + + K NV FEV + ++ D++ +D+
Sbjct: 112 FPEFTVAGFDTIAVERLSADVADSDLDNMLEVLRKQNVRFEVADRAAQNEDQLNIDFVGK 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + S Q ++GS + + LVG K G+++ + FPED+ DLAGK
Sbjct: 172 VDGEVFAGGSATATQLVLGSGRMIPGFEDGLVGAKAGEERVLNVTFPEDYQNLDLAGK 229
>gi|160872631|ref|ZP_02062763.1| trigger factor [Rickettsiella grylli]
gi|159121430|gb|EDP46768.1| trigger factor [Rickettsiella grylli]
Length = 438
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 95/453 (20%), Positives = 202/453 (44%), Gaps = 27/453 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + + R L++ +P+++L + + + ++ K + GFRPGKVPL HI+ LYGK
Sbjct: 5 MQVSVESLDNFTRLLNITVPASQLEERKKQHLLELARKTRLDGFRPGKVPLGHIEKLYGK 64
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI E I++ ++ + L ++ +P I S DL +++
Sbjct: 65 SIWHEVIEKTLRISLSNALEQKTLNPVSQPHIE---------SIKAAPGTDLTYTARFEV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +E+ S + + + + E+++D+ + +I + + ++ GDKVT D
Sbjct: 116 YPPVEVPSLKGVSLEKINVTITEEDLDKVLEKIRRQYAEWIEVPDKACYGDKVTFDIV-- 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + + E LV K GD + ++ A
Sbjct: 174 FSDTAEKTRKDLQWILEPDK---IPEGFSALVSSKAGDTLSVSFPHDQESKQTYTA---- 226
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+K+V +++ A +L E+ SA++ + ++ + ++R+K+K QI+
Sbjct: 227 --TIKVKKVAKAKLPELDDTFAKKLDIKEETMSALKRQTKEHMQIELDNVLREKLKAQII 284
Query: 299 DYISNKY-TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D + + ++P+ ++ E+ + Q + + + +++ E + LA+RR
Sbjct: 285 DKLVALHVIHELPKGVLHQEFQRLEQDIFRQEKQQGKNKKDL---SESQKKDLMQLARRR 341
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G++ EK ++ E +Q + + F + M D K N L +R+ +
Sbjct: 342 VTLGLLFNAFIEKYQLQADESRVQQYIDRFASAFQYD-QMMRDKLYKDKNMLMSIRSSVL 400
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
ED+VID +L+ V+ V++ + ++ + +S++
Sbjct: 401 EDQVIDKLLEEVEYVEKTADYSEIMNFTSKNQE 433
>gi|94968589|ref|YP_590637.1| trigger factor [Candidatus Koribacter versatilis Ellin345]
gi|118574057|sp|Q1IRD7|TIG_ACIBL RecName: Full=Trigger factor; Short=TF
gi|94550639|gb|ABF40563.1| trigger factor [Candidatus Koribacter versatilis Ellin345]
Length = 437
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 84/426 (19%), Positives = 185/426 (43%), Gaps = 15/426 (3%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETID 68
L R + V IPS+ + N+ ++ A + GFR GKVP S I++ + + I E +
Sbjct: 21 NPLLRSVTVEIPSDVVDAERNKHVQQYAKLARVPGFRKGKVPPSVIRTRFAQDINEEIVR 80
Query: 69 EIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISS 128
+I E K++ + +P +T + LK ++ILP+I +
Sbjct: 81 TLIPHYFREETGKQNLQPVSQPQVT---------DLHLHDGEPLKFTAEFEILPEIPTTG 131
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSVDNVIL- 186
+++++V EV + EI+ + + + ++ ++ +E GD V + + +
Sbjct: 132 YENIKVEHPPVEVTDAEIEDTIKSLQEQRATYDPIEDRAAEDGDFVQISFEGRDKSDPEA 191
Query: 187 EDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSI 246
+ ++ +G ++ E TE L G K GD+K + +P D+ + LAGK V + S+
Sbjct: 192 KPVEVPSIMVELGGSNTVQEFTENLRGTKAGDEKTFDVVYPADYGDQRLAGKSVEYHVSV 251
Query: 247 KEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNK 304
K + + ++ ++ +R + + + + K +++D +
Sbjct: 252 KSLKKKIFPELDEAFISELGADVKTPDELRAKIREGAEHEKKHHAEHEGKDKLVDALVKL 311
Query: 305 YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-EEDLQYYHMLAKRRVLTGIV 363
F VPES+V ++ L++ ++ +++++ +D + + A R V ++
Sbjct: 312 NDFPVPESMVNSQIEIRLERGLRALAQQGMRTEDMKKMDFGKLREGQREAATREVKASLL 371
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
L I + IEV++EE+ + + +++ + +L +R I +K +D
Sbjct: 372 LEKIADAEKIEVSDEELDRQIAGLARQSQQSPEQVRARLTQD-GSLDRIRTQIRNEKTLD 430
Query: 424 HILKSV 429
+
Sbjct: 431 LLYSRS 436
>gi|258516487|ref|YP_003192709.1| trigger factor [Desulfotomaculum acetoxidans DSM 771]
gi|257780192|gb|ACV64086.1| trigger factor [Desulfotomaculum acetoxidans DSM 771]
Length = 435
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 79/442 (17%), Positives = 188/442 (42%), Gaps = 17/442 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ E L+V + + + + N+ + NI GFR GK P I+ +GK
Sbjct: 1 MKATVDRIEKNTVLLEVEVDQEQFSQALNDAYRKVVKNVNIPGFRKGKAPKRVIERYFGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ +E ++ II + + + +++ +P + + + +E + + +
Sbjct: 61 EALYNEAVEAIIPDAYMKAVEEQNIFPIDQPQMELVQ---------VEEGKPVIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++E+ + DL++ + + EV E+++ +++ + + D V +D+
Sbjct: 112 VKPEVELGQYTDLELVRPVIEVAEEDLAKELEALQNRYAKLINLDEGQVQDGDTVIMDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D ++ +GS+ + E +VG+ +G+ KEI FP+D+ ++LA K
Sbjct: 172 GKADGEEFAGGKAQDYSLQIGSSSFIAGFEEQMVGMSSGETKEINVTFPQDYHAENLAAK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A F++ ++ K+K ++E V+Q ++ Q
Sbjct: 232 DAVFTVTVKTIKRKDIAPLDDEFAKDVSEFDTLEELKEDLLNKLKLNAETQVQQSLEDQA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML---- 353
+D + ++PE ++ + + ++ + + + + +
Sbjct: 292 VDKVVANAEAEIPEVMINAQIDDMMSNMEHRLMAQKVSLDDYLKFTNSSREQMRAELRVD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ V T +VL IG+ ++E TEEE+ A ++ ++L K
Sbjct: 352 AEKAVKTSLVLEAIGKALSVEATEEEVNEAFENLSKQYNQD-AEILRKIMKSQGRYEVFV 410
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I +K + I++ IV++
Sbjct: 411 EGIQREKTVKLIIEKSNIVEQA 432
>gi|229087038|ref|ZP_04219192.1| Trigger factor [Bacillus cereus Rock3-44]
gi|228696301|gb|EEL49132.1| Trigger factor [Bacillus cereus Rock3-44]
Length = 427
Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats.
Identities = 80/438 (18%), Positives = 185/438 (42%), Gaps = 21/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MAAKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVKTINVPGFRKGKMPRPLFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDETGIFPVAHPEIDIEK---------FEKNENLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKSLQERQAELVVKEEGTAENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK G+ K++E FPE++ ++LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQIIGLKAGESKDVEVSFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ E+ + +N++ A E + ++ +++ + KV+ +
Sbjct: 232 PATFKVTVHEIKTKELPALNDEFAKDADEEVATLDELKAKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + ++PE+++E E + ++++ +S + ++ +
Sbjct: 292 VVEKAAANAEIEIPEAMIETELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ K +D ++ + +
Sbjct: 408 SEDLKVRKAVDFLVDNSK 425
>gi|299140389|ref|ZP_07033549.1| trigger factor [Acidobacterium sp. MP5ACTX8]
gi|298597639|gb|EFI53817.1| trigger factor [Acidobacterium sp. MP5ACTX8]
Length = 478
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 176/441 (39%), Gaps = 27/441 (6%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSE 65
+ L R ++V P+ + +F + I+ A I GFR GKVP + IKS +GK + E
Sbjct: 46 TLNPELTRSIEVEAPAADVDKAFRQVIKRYTKLARIPGFRAGKVPEAMIKSRFGKEVRQE 105
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
++ ++ + + L ++ +P ++ + L+ + ++++LP+I
Sbjct: 106 VLESLVSDRFRKALEEQKINPVSQPQVS---------ELFLVEGQPLRFKATFEVLPEIN 156
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE---------------IG 170
I +D + V + + E+E ++A + + E E +
Sbjct: 157 IDGYDSISVQRPDSTLTEEEYQAELANVLDRHATVEPVEEDRPLVDGDWAEIGFQGQVQE 216
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
TV + + ++V +G + TE L G K G + E +P +
Sbjct: 217 LAQTVTEDGLESASNAQPITGEDVLIEIGGKNTLFAFTEALRGAKVGQELTFEASYPAEF 276
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLV 289
LAGK V + ++K + + + A + +E+ + + +
Sbjct: 277 GEARLAGKTVSYDVTVKSIKRKDYPERDEEFAKQLGPYENWGDFETKLREHAGSRKKDAL 336
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-EEDLQ 348
+ + ++LD + K+ F +PE+ V+ + + L++ ++ S + +D +
Sbjct: 337 EAQARDKMLDELVEKFNFPLPETFVQQQIDARLERGLRALAQQGMSSDAMRQLDFGRLRE 396
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
A + V ++L + E+ +EV++E+++ L + + + +
Sbjct: 397 AQRDQAVKEVKASMILDRVAERETVEVSDEDLERELLMLSIQSREPYDALRKRLTED-GS 455
Query: 409 LAELRAPIFEDKVIDHILKSV 429
L +R + +K + + V
Sbjct: 456 LDRIREQMRREKTGAALFEKV 476
>gi|311896033|dbj|BAJ28441.1| putative trigger factor [Kitasatospora setae KM-6054]
Length = 464
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 81/448 (18%), Positives = 178/448 (39%), Gaps = 20/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L S + + I + + GFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLIVEVPFEELKPSLDAAYKKINQQVTVPGFRKGKIPNKVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + + + +P IT EG + + DLK D
Sbjct: 61 GAVLEEAVNDALPRFYTQAVDEGQIDVLGQPDITEIEGVEN-----LADGGDLKFTAEVD 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++ + F ++ V D EV ++++++ + ++ + + + E + D V +D
Sbjct: 116 VRPEVTLPEFAEIAVVVDPIEVSDEDVEKSLEQLRERFASVKDVERAATENDIVVIDLEA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD + ED + V + +GS L E +VGL G+ K GK
Sbjct: 176 KVDGEVPEDGTATGVSYEIGSGRLLDGIDEAVVGLSAGESKTFTTTL----KGGTQVGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ V ++++ A F++ +R +++++ EF + + ++L
Sbjct: 232 SEVTVTVTAVQEKELPELDDEFAQLASEFDTLEELRADSVKRLERMKEFDQATQAQEKVL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
D + ++ D PE L+ +E + + + D E+ +
Sbjct: 292 DELLSRVELDYPEKLLADEIGTRKHNLEHHQLEPMGLTLDTYLASQDKSHEDYEKETEEQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
AK+ + T VL I + + V +EE+ L ++ + +
Sbjct: 352 AKKGIKTQFVLDQIVKNEELGVNQEELTEHLIRRAAGSGLTPDQFAQQVVQGGQVQLL-V 410
Query: 414 APIFEDKVIDHILKSVQIVD---RKVTF 438
+ K + ++++ ++ D V+F
Sbjct: 411 GEVARGKALALVVEAAKVTDTNGETVSF 438
>gi|23099533|ref|NP_692999.1| trigger factor [Oceanobacillus iheyensis HTE831]
gi|41018218|sp|Q8CXB7|TIG_OCEIH RecName: Full=Trigger factor; Short=TF
gi|22777763|dbj|BAC14034.1| trigger factor (prolyl isomerase) [Oceanobacillus iheyensis HTE831]
Length = 428
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 81/440 (18%), Positives = 190/440 (43%), Gaps = 20/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG K L + + + ++ + + I GFR GK+P + +G
Sbjct: 1 MTAKWEKQEGNKGVLTFEVSAEEFEQALDQAFKKVSKDVQIPGFRKGKIPRGIFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ + + + D +PS+ I++ IE +L +
Sbjct: 61 EALYQDAVDIVLPSAYTKAVEEADIFPIAQPSVDIDQ---------IERGKELIFTAEVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L+V ++ EV ++++++++ + + + +E E GD +D+
Sbjct: 112 VKPEVKLGEYKGLEVEEESVEVTDEDVEKEIENVRERHAELIVKEEEAIENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E L+G K G++ E+ FPE++ +DLAGK
Sbjct: 172 GFQDGVAFEGGKGENHSLEIGSGQFIPGFEEQLIGKKAGEETEVTVTFPEEYHAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ N I EV + ++++ A ES ++ +++ + + V K + +
Sbjct: 232 EAVFNVKINEVKAKELPELDDEFAKDVDEEVESLDELKKKKRNELETNKKQEVENKKREE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ S+ D+PE++V+ E N ++++ ++ + ++ +
Sbjct: 292 LIQKASDNVEVDIPEAMVDTEVNQMVREFEQQLQMQGMTLEMYAQFSGQDEDALKEQMRE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A +RV T + L I E I+ +EE++++ L + + +++ L
Sbjct: 352 DAAKRVKTNLTLEAISEAEGIKPSEEDIKAELEKMASMYGAEVDQLVQMLGGNTE---TL 408
Query: 413 RAPIFEDKVIDHILKSVQIV 432
+ ID + ++ +
Sbjct: 409 ENDLKVKAAIDFLAENSKTK 428
>gi|328882451|emb|CCA55690.1| Cell division trigger factor [Streptomyces venezuelae ATCC 10712]
Length = 461
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 89/475 (18%), Positives = 195/475 (41%), Gaps = 21/475 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEAEVNPLGQPEVDITE---------LKDGELLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P IEI + ++VT D EV ++++++ + ++ + + E + GD VT+D
Sbjct: 112 IRPTIEIPDYSGIEVTVDAVEVTDEDVEKSVEQLRERFASTSPVERAAAEGDVVTIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +L D +V + +GS +L E + GL+ G E F GK
Sbjct: 172 KVDGEVLPDGVASDVSYTIGSGELLDGIDEAVKGLEAG----GEATFTSQLKGGSAEGKD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + ++++ A + F++ ++ ++++ +F + + ++L
Sbjct: 228 AEVTVKVTTVAARELPELDDEFAQMASEFDTLDELKADSRKRLENMKQFDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-----QKSQNVDSIDEEDLQYYHML 353
D + +PE L+E+E N + + + +EE L
Sbjct: 288 DELLKLVEVPMPEKLLEDEINTRKHNLEHHQLGQMGLDLAKYLEIQGKTEEEFLAETKEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ + T +L + K ++V+ EE+ L+++ + + + L
Sbjct: 348 AEKGIKTQFILDELVNKEKLDVSREELTEHLFRRAASSGMSPDQFAQAVAE-GGQVPMLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEA 468
+ K + ++++ ++VD L D+ + ++ E SE+
Sbjct: 407 GEVARGKALAVVVEAAKVVDTNGEVVDLSDDEDDVENAAEAVEAVTGEAEVSEDK 461
>gi|315282076|ref|ZP_07870566.1| trigger factor [Listeria marthii FSL S4-120]
gi|313614278|gb|EFR87932.1| trigger factor [Listeria marthii FSL S4-120]
Length = 427
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 88/437 (20%), Positives = 179/437 (40%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG +L I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + P + I E L
Sbjct: 61 EALFQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESM---------EKGETWVLTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV-DYT 178
+ P++++ + L+V + + +E++ ++ ++ + VKE + D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRETTLTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V + E+ + ++++LA E+ ++ S+++++ E V Q + +
Sbjct: 232 AVVFKVKLHEIKTKEVPTLDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++ D+P ++V +E + ++ ++ + Q +E
Sbjct: 292 VIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMEK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIE TEE + + ++ + + ++EL
Sbjct: 352 DAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAAL----GDMSEL 407
Query: 413 RAPIFEDKVIDHILKSV 429
++ + K ID +L S
Sbjct: 408 KSDLKIRKAIDVLLDSA 424
>gi|303239031|ref|ZP_07325561.1| trigger factor [Acetivibrio cellulolyticus CD2]
gi|302593369|gb|EFL63087.1| trigger factor [Acetivibrio cellulolyticus CD2]
Length = 428
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 82/439 (18%), Positives = 186/439 (42%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L++ + + + + + K N+ GFR GK P + ++ +G
Sbjct: 1 MSVKVEKKEKNIVQLEIEVDAAKFEEGLQKSYLKNVKKFNVPGFRKGKAPRNIVERQFGV 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E I+ + E + + + D RPSI I + I +L
Sbjct: 61 EILYEDAINIVCSEAYDKAIEENDIHPVDRPSIDIKQ---------IGKGENLIFVADVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++ + + ++V + V E ++++++ + A+ + V++ + GD +D+
Sbjct: 112 VKPEVVLGQYKGVEVEKVQALVTEDDVEKEINKAAEKSARMITVEDRGIQKGDIADIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+DN E +GS + + L+ K GD E+ FPED+ K+L+GK
Sbjct: 172 GFIDNEPFEGGKASGYSLEIGSGSFIAGFEDQLIDAKPGDDVEVNVTFPEDYGNKELSGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I +V V++++ A F++ + +K+ + +E + + + +I
Sbjct: 232 PALFKVIINDVKMKELPVLDDEFAKDVSEFDTFEEYKQDIRKKLTEDAEHKAKHETEDRI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEE----DLQYYHML 353
++ ++ T ++P+ +VE + +++ + + +I +
Sbjct: 292 INKVNENATVEIPDVMVEKHIDNLVKDFDSRLRYQGLDLEKYLNIMGMGYIDFRSQFEKR 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ V T +VL + + +I+ +EEE + + + ++ H + + +
Sbjct: 352 AQAEVKTQLVLDAVCKTEDIKASEEEFNEEVAKIAENYKQDVEEFKKHLHDHD--IEYIN 409
Query: 414 APIFEDKVIDHILKSVQIV 432
I K I+ +++S +IV
Sbjct: 410 DTIKIRKTIELLVESAKIV 428
>gi|319945636|ref|ZP_08019888.1| trigger factor [Streptococcus australis ATCC 700641]
gi|319748235|gb|EFW00477.1| trigger factor [Streptococcus australis ATCC 700641]
Length = 427
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 180/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + E ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPALDRVFESVKKNLNVPGFRKGHLPRPIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +++++ + + +P+ + E D L +
Sbjct: 61 ESLYQDALNDLLPAAYEAAVKEAGLEVVAQPTFDVVSM---------EKGQDWTLTANVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+V+ + EV ++++D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVSVEVSKEVTDEDVDARIERERNNLAELVIKEGPAAEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG G+ ++ FPE++ DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPENYQATDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ + E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLAELKEKYRKELAEAKEEAYKDAVESA 291
Query: 297 ILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+PE ++ E + + + M Q + E+ + Y
Sbjct: 292 AIDLAVENAEIIDLPEEMIHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A R T +V+ + + E T+EE+ + + Q + +++ P
Sbjct: 352 ADAAARTKTNLVVEAVAKAEGFEATDEEVTAEIEQLAADYNMPVEQVRSLL--SPEM--- 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAVKKAVEVITSTAKVK 427
>gi|320534800|ref|ZP_08035219.1| trigger factor [Actinomyces sp. oral taxon 171 str. F0337]
gi|320132979|gb|EFW25508.1| trigger factor [Actinomyces sp. oral taxon 171 str. F0337]
Length = 453
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 82/443 (18%), Positives = 183/443 (41%), Gaps = 26/443 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + +L V +P L S + ++I S+ + GFR G VP I G+
Sbjct: 1 MKTTVENLDPSRIKLTVEVPYEELKPSLDAAYKEIGSQIQVPGFRRGHVPNRVIDQRVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ E ++ + + + +++ + ++P + + E + + E L
Sbjct: 61 GAVIQEAVNNKLSDFYRDAITEAERVPMLQPEVDVVE----LPNATGENGGQLAFTAEVT 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P IE+ ++T D EV +++ID ++ + + + +++ GD VT+D
Sbjct: 117 VRPVIELPDLSTAKLTVDAVEVADEDIDTELDNLRARFGSLKSVGRKAKTGDFVTIDLKA 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S V + +G ++ L GLKT + F + + + AG++
Sbjct: 177 VIDGEEVDSISG--VSYEIGKGNMLKGLDTALRGLKTDE----SATFTTELAGGEHAGEQ 230
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V V+++ A F++ +R +++ + + +L
Sbjct: 231 AEVTVTATAVKQRELPKVDDEFAQLASEFDTVEELREDLVKQVTERKTGEQAVAARDALL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+++ ++ TFDVPE++VE E L+ DEE + V
Sbjct: 291 EHLRSEVTFDVPEAVVEAEVAQHLR-------------AEGKDGDEEHAKEIREDIVTGV 337
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L + E+ + V ++E+ L+Q ++ + L Q+ + + +
Sbjct: 338 RDQIILDVLAEELKVGVAQDELLEFLFQTAQQYGMEPAQFLQGAQQ-AGQIPAFVSEVAR 396
Query: 419 DKVIDHILKSVQIVDRKVTFDQL 441
+K + L+ +VD K L
Sbjct: 397 NKSLAMALRQAAVVDSKGETVDL 419
>gi|329946406|ref|ZP_08293973.1| trigger factor [Actinomyces sp. oral taxon 170 str. F0386]
gi|328527382|gb|EGF54380.1| trigger factor [Actinomyces sp. oral taxon 170 str. F0386]
Length = 460
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 81/443 (18%), Positives = 182/443 (41%), Gaps = 26/443 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + +L V +P L S + ++I S+ + GFR G VP I G+
Sbjct: 1 MKTTVENLDPSRIKLTVEVPYEELKPSLDAAYKEIGSQIQVPGFRRGHVPNRVIDQRVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ E ++ + + + +++ + ++P + + E + + E L
Sbjct: 61 GAVIQEAVNNKLSDFYRDAITEAERVPMLQPEVDVVE----LPNATGENGGQLSFTAEVT 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P IE+ ++T D EV ++++D ++ + + + +++ GD VT+D
Sbjct: 117 VRPVIELPDLSKTELTVDAVEVTDEDVDTELDNLRARFGSLKSVGRKAKTGDFVTIDLKA 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S V + +G ++ L GLKT + F + + + AG++
Sbjct: 177 VIDGEEVDSISG--VSYEIGKGNMLKGLDTALRGLKTDE----SATFTTELAGGEHAGEE 230
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V V+++ A F++ +R +++ + + +L
Sbjct: 231 AEVTVTATAVKQRELPKVDDEFAQLASEFDTVEELREDLVKQVTERKTGEQAVAARDALL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++ +FDVPE++VE E LQ DEE + V
Sbjct: 291 EQLRSEISFDVPEAVVEAEIAQHLQ-------------AEGKEGDEEHSKEIRDDIVTGV 337
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L + E I V ++E+ L+Q ++ + L Q+ + + +
Sbjct: 338 RDQIILDVLAEDLKIGVAQDELLEFLFQTAQQYGMEPAQFLQGAQQ-AGQIPAFVSEVAR 396
Query: 419 DKVIDHILKSVQIVDRKVTFDQL 441
+K + L+ +++D K L
Sbjct: 397 NKSLATALRQAKVIDSKGEAVDL 419
>gi|229175155|ref|ZP_04302671.1| Trigger factor [Bacillus cereus MM3]
gi|228608291|gb|EEK65597.1| Trigger factor [Bacillus cereus MM3]
Length = 425
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 82/437 (18%), Positives = 184/437 (42%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + + + + +S + + + N+ GFR GK+P + +G
Sbjct: 1 MAAKWEKLEGNVGVLTIEVDAKEVNNSIDAAFKKVVQTINVPGFRKGKMPRPLFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D I+ + E + + P I I + E +L
Sbjct: 61 ESLYQDALDIILPKAYGEAIDEAGIFPVDHPEINIEK---------FEKNANLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +++++ ++ + + VKE + D +D+
Sbjct: 112 VKPEVKLGEYKGLAVEKVETTVTDEDVENELKSLQERQAELVVKEEGTVENGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E ++GLK+GD KE+E FPE++ +LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLAIGSGTFIPGFEEQVIGLKSGDSKEVEVSFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I E+ + +N++ A E + ++ +++ + KV+ +
Sbjct: 232 PATFKVTIHEIKTKELPELNDEFAKEADEEVATLDELKTKLRTNLEEGKKHEAEHKVRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+++ + ++PE++++ E + ++++ +S + ++ +
Sbjct: 292 VVELAAANAEIEIPEAMIDTELDRMVREFEQRLSQQGMNLELYYQFTGTDADKLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIEVTEEE+ + + + + + ++ L
Sbjct: 352 DAQKRVRINLVLEAIIEAENIEVTEEEVTAEVEKMAEMYGMPVDAIKQAL----GSVDAL 407
Query: 413 RAPIFEDKVIDHILKSV 429
+ K +D ++ +
Sbjct: 408 SEDLKVRKAVDFLVDNA 424
>gi|294790935|ref|ZP_06756093.1| trigger factor [Scardovia inopinata F0304]
gi|294458832|gb|EFG27185.1| trigger factor [Scardovia inopinata F0304]
Length = 461
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 76/470 (16%), Positives = 182/470 (38%), Gaps = 26/470 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-K 60
++ + E ++ L + + N L + ++I ++ NI GFR G VP I+ +G
Sbjct: 6 KITVRNVEPTRKVLTITVDKNELEPHMEKARKNIANQVNIPGFRKGHVPGKLIEQRFGYG 65
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E +++ + E + + +R R +P I + + + LK ++
Sbjct: 66 AVVGEAVNDAVPEFYNQAIEERKLRPMDQPKIDMKD-----VPESRDDGKKLKFTADVEV 120
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ F + V V E ++++++ + + + ++ GD V
Sbjct: 121 RPEVKLPDFASMTVDIPAPAVTEDDVNQRLDALRQRFGTLTSVDRPAKKGDFANVSLDAQ 180
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D ++ S+ V + +GS + + E L GL G++ E + G+K
Sbjct: 181 IDGKSVD--SQDGVSYEIGSGTMLAGMDEALDGLSAGEETTFESTL----EGGEHEGQKA 234
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ ++ V +++D A F++ ++ ++ + ++ + + +
Sbjct: 235 QIKVTLNSVKEEQLPDLDDDFAKDASEFDTLDELKEDIRKQSQVDAQARQATEARDAFMT 294
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
I VP+ ++EN L+ + ++ +E + A + +
Sbjct: 295 QIEEAEEIPVPKGILENTTKEHLRSM---------GVEDPKKATKEQKKEAEDSAIKELR 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
IVL T+ E N++VT+ ++ + L ++ + K L +
Sbjct: 346 DQIVLDTLAEALNVQVTQTDVTNFLASIAQQYGMDPSNFITSIVKN-GQLNSAVQEVARS 404
Query: 420 KVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
K + ++ V D + V Q E S + + +S E
Sbjct: 405 KGMIEAMRQVTFTDPDGKTVDLGQFLGTGEEESEDDSVAAASDAAAVADE 454
>gi|160945106|ref|ZP_02092332.1| hypothetical protein FAEPRAM212_02625 [Faecalibacterium prausnitzii
M21/2]
gi|158442837|gb|EDP19842.1| hypothetical protein FAEPRAM212_02625 [Faecalibacterium prausnitzii
M21/2]
Length = 438
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 76/439 (17%), Positives = 179/439 (40%), Gaps = 20/439 (4%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
+ + E EL I + + + + K ++GFR GK P + I+ +YG +
Sbjct: 4 IKCEKLEKSMAELQFSIDAEAFKKAVADVFKKEGKKYPVQGFRKGKAPKALIEKMYGADV 63
Query: 63 L-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ I+E+ E + RP +T++ L + +
Sbjct: 64 FTYDAINELFPEAFEAAAKEAGVEPVGRPEVTVDSAS---------EAEGATLTVKVAVK 114
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P+I++ S++ L V + + V ++ +D ++ + + N +E ++ GD +D+ V
Sbjct: 115 PEIKVGSYNGLTVEKTVHTVTDEAVDAELKRVQERNARELTREGAAQNGDIADIDFEGFV 174
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V E ++ +GS E +VG G++ ++ FP ++ +LAGK
Sbjct: 175 DGVAFEGGKAEHYNLTLGSGSFIPGFEEQVVGHSAGEEFDVNVTFPTEYQAAELAGKAAV 234
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ EV ++++LA +++ + + ++ + V+ ++D
Sbjct: 235 FKIKLHEVKYKELPALDDELAKDCSEYDTLDEFKASIRKNNQEQLDKQDDLAVENALVDQ 294
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAKR 356
+ ++P+++ + + ++ F + + ++ E+ + A++
Sbjct: 295 VIESMEGEIPQAMYDVRMDEMVNDFAFRVEQQGLRLEDYLKYMGQSMEQFRAAFMPQAEK 354
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V G+ L + +IE +E+E+ + + + ++ E K+ + L +L+ +
Sbjct: 355 QVKIGLALEAVAAAEHIEASEDEINAEIKRIADQYKMEEDKVRELIN-----LEDLKQDL 409
Query: 417 FEDKVIDHILKSVQIVDRK 435
K ID I IV +
Sbjct: 410 ARTKAIDFIKSHANIVVKP 428
>gi|291288696|ref|YP_003505512.1| trigger factor [Denitrovibrio acetiphilus DSM 12809]
gi|290885856|gb|ADD69556.1| trigger factor [Denitrovibrio acetiphilus DSM 12809]
Length = 452
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 86/445 (19%), Positives = 202/445 (45%), Gaps = 14/445 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V E ++ L V IP++ F+ + + I+GFR GK P + G
Sbjct: 1 MKVTVADGEKSQKILSVEIPADTYKGVFDAELAKVSKNIKIQGFREGKAPKEMVLKEKGH 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + ++ ++ + V + + D RA +P + + E D + + D+
Sbjct: 61 AVRVQALELVVNDSVKTAIEENDIRAMGQPEVKDVKFEDD--------DTPITFNVHVDV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV---KETESEIGDKVTVDY 177
P EI+ + + T+++ EV E+++D + + + AFE + +GD+ +D+
Sbjct: 113 FPTFEITKYKGFEFTKEMNEVAEEDLDAVLQNLRERQAAFEPVEGDDAVIAMGDQAVMDF 172
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
S++ ++ + + K+ +GS E VG+K G++K+I FPE++ +AG
Sbjct: 173 EGSMNGEVIPNATAKDFALEIGSGQFVPGFEEQCVGIKKGEKKDIVVTFPENYQEPSMAG 232
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ V +I E+ ++++ A +E+ + ++ + ++ +E + + V
Sbjct: 233 QPVTFAITINEIKRKAIPELDDEFAKDVDEKYETLAQLKEDIKKDLELEAEEMAKDAVYN 292
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
+LD + FD+P +V + ++++ + + + + +A+
Sbjct: 293 SMLDKFMEENPFDIPTVMVREQAMRLVEQQLRQYAMYGIDPAQMGIDKNALAEQNFPVAE 352
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
++V + +++ IGE I TEE+ + +L + R+ + ++ +Y + +
Sbjct: 353 KQVKSALIINEIGEIEKINPTEEDTEKSLDEYAERYGKTKDELKKELDQYGG-MQSFQNT 411
Query: 416 IFEDKVIDHILKSVQIVDRKVTFDQ 440
+F + V D +LK ++ D+ +T +
Sbjct: 412 VFTNMVYDLLLKENKVEDKIITKAE 436
>gi|260906245|ref|ZP_05914567.1| trigger factor [Brevibacterium linens BL2]
Length = 456
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 81/471 (17%), Positives = 179/471 (38%), Gaps = 26/471 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + ++ V +P L S +E + I + I GFR GKVP I G+
Sbjct: 1 MKSSVEQLDPTRVKISVDVPYAELKPSIDEAYKTIGGQVTIPGFRQGKVPARIIDQRVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ E ++ + E + + D + +P + I S++ DL + D
Sbjct: 61 PAVIQEAVNNGLDGFYREAVEENDLKPLGQPEVEI----SEVPGLDGTEDGDLTFTVEVD 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P IE+ ++D + V D EV + ++D ++ ++ + + D VT+D
Sbjct: 117 VRPAIELPAYDTISVEVDPIEVTDDDVDAELEQLRTRFGTLSSVDRPAAKDDFVTLDLVA 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D ++ + ++ + VG+ + E L GL + F + + AG+
Sbjct: 177 TIDGEEID--TASDISYQVGAGTMLDGMDEALDGLSA----DETTTFETTFAGGEHAGET 230
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++ V ++D A F++ +R ++ + E + + ++L
Sbjct: 231 GTVSITLSAVKVRELPEADDDFAQLASEFDTIDELRTDLREQAAKQKETDQGAQARDKVL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VPE +V +E L+ D+E + +R +
Sbjct: 291 ESLIETLNVPVPEKVVTDEVERHLES-------------ESRVDDDEHRKEVTEETERNL 337
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T +L I E +EVT+ E+ L ++ + + + L +
Sbjct: 338 RTQFILDAIAEAEEVEVTQPELIEYLISASQQYGMNPNEFAQMLDSS-GQVNALVGEVSR 396
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
K + L + D + + + ++ E ET + +
Sbjct: 397 RKALAAALAGAVVKDTEGKVVDMEEFTTPPEEEAPEGAEDSDETAEDSDET 447
>gi|302035648|ref|YP_003795970.1| trigger factor (tF) [Candidatus Nitrospira defluvii]
gi|300603712|emb|CBK40043.1| Trigger factor (TF) [Candidatus Nitrospira defluvii]
Length = 441
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 81/446 (18%), Positives = 181/446 (40%), Gaps = 22/446 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ +KR L + +P++ + F + ++ + I GFRPGK PL ++ Y K
Sbjct: 1 MKMEMTELGPMKRALKIEVPADEVNLRFVQAYSELNRQVRIPGFRPGKAPLQLLEKRYAK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + I ++ + + + + + ++ + +I
Sbjct: 61 TIEEDVIRSLVPDYYDRAIRQAGIVPVL-------VEIPPLERVKVKKDTPFSFTATVEI 113
Query: 121 LPQIEISSFDD---LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE--IGDKVTV 175
P IE+ + + + QD V ++++++ + + + + GD +
Sbjct: 114 KPTIELRDYKAPNPISLKQDQRTVTDEQVEKALNVLREQMAQLHPAPAGTTLADGDYAVL 173
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETT--EILVGLKTGDQKEIERFFPEDHSIK 233
D ++D LE +K+ +GS L G K G+ + + +P H
Sbjct: 174 DIEGTLDGKALEGTTKEGYLHKMGSHASVLGIDIEAHLPGKKEGESITVPQAYPATHPDT 233
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQK 292
+AGK V +IK V ++++ A ++S +R ++++ + +
Sbjct: 234 RVAGKTVNFRCTIKSVKQKQLPALDDEFAKDCGPYQSLQEIREKLRAEMERALKKDIEDS 293
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV------DSIDEED 346
K IL ++ + F++P +LVE E + ++++ + + ++
Sbjct: 294 YKDTILKRLAETHHFELPGTLVERELSAMVRQQLQSRQRKSGDQSDTSPTSPQTEDAKKL 353
Query: 347 LQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ-KY 405
+ A+RRV G++L + K +I VT E++ + + + +++ Q
Sbjct: 354 QEELRPEAERRVKVGLILEALAAKESITVTSEDLSNEITRLAAEVKLSVEEVTRMIQAGG 413
Query: 406 PNALAELRAPIFEDKVIDHILKSVQI 431
+ L +LR+ I DK +D + K I
Sbjct: 414 QDTLDDLRSRILADKALDFVYKHAMI 439
>gi|297194373|ref|ZP_06911771.1| trigger factor [Streptomyces pristinaespiralis ATCC 25486]
gi|197720969|gb|EDY64877.1| trigger factor [Streptomyces pristinaespiralis ATCC 25486]
Length = 466
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 78/425 (18%), Positives = 172/425 (40%), Gaps = 21/425 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + ++ E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKLYTEAVNEAELNPLGQPEVDITE---------LKDGETLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+I+I + ++VT D EV ++++++ + ++ + + E + GD VT+D
Sbjct: 112 IRPEIQIPDYSGIEVTVDAVEVTDEDVEKSVEQLRERFASTNPVERAAAEGDVVTIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +L D + V + +GS +L E + GL+ G E F GK
Sbjct: 172 KVDGEVLPDGVAEGVSYTIGSGELLDGIDEAVTGLEAG----GEATFTSQLKGGSAEGKD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +++D A + F++ ++ ++++ ++ + + ++L
Sbjct: 228 AEVTVKVTAVAARELPELDDDFAQMASEFDTLDELKADSRKRLENMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-----QKSQNVDSIDEEDLQYYHML 353
D + +PE L+E+E + + + +EE
Sbjct: 288 DELLKLAEVPIPEKLLEDEVKTRKHNLEHHQLGQMGLDLAKYLEIQGKTEEEFDAETKEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T +L + K + V +EE+ L ++ + + + L
Sbjct: 348 AVKGIKTQFILDELVNKEKLNVNQEELTEHLMRRAQSSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFE 418
+
Sbjct: 407 GEVAR 411
>gi|295105646|emb|CBL03190.1| trigger factor [Faecalibacterium prausnitzii SL3/3]
Length = 438
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 74/439 (16%), Positives = 181/439 (41%), Gaps = 20/439 (4%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
+ + E EL I + + + + K ++GFR GK P + I+ +YG +
Sbjct: 4 IKCEKLEKSMAELQFSIDAEAFKKAVADVFKKEGKKYPVQGFRKGKAPKALIEKMYGADV 63
Query: 63 L-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ I+E+ E + RP ++++ L + +
Sbjct: 64 FTYDAINELFPEAFEAAAKEAGVEPVGRPEVSVDSAS---------EAEGATLTVKVAVK 114
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++++ S++ L V + + V ++ +D ++ + + N +E ++ GD +D+ V
Sbjct: 115 PEVKVGSYNGLTVEKTVHTVTDEAVDAELKRVQERNARELTREGAAQNGDIADIDFEGFV 174
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V E ++ +GS + E +VG G++ ++ FP ++ +LAGK
Sbjct: 175 DGVAFEGGKAEHYNLTLGSGSFIPDFEEQVVGHSAGEEFDVNVTFPTEYQAAELAGKAAV 234
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ EV ++++LA +++ + + ++ + V+ ++D
Sbjct: 235 FKIKLHEVKYKELPALDDELAKDCSEYDTLDEFKASIRKNNQEQLDKQDDLAVENALVDQ 294
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAKR 356
+ ++P+++ + + ++ F + + ++ E+ + A++
Sbjct: 295 VIESMEGEIPQAMYDVRMDEMVNDFAFRVEQQGLRLEDYLKYMGQSMEQFRAAFMPQAEK 354
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V G+ L + +IE +E+E+ + + + ++ E K+ + L +L+ +
Sbjct: 355 QVKIGLALEAVAAAEHIEASEDEINAEIKRIADQYKMEEDKVRELIN-----LEDLKQDL 409
Query: 417 FEDKVIDHILKSVQIVDRK 435
K ID I IV++
Sbjct: 410 ARTKAIDFIKSHANIVEKP 428
>gi|149923963|ref|ZP_01912349.1| Trigger factor [Plesiocystis pacifica SIR-1]
gi|149815195|gb|EDM74744.1| Trigger factor [Plesiocystis pacifica SIR-1]
Length = 453
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 77/439 (17%), Positives = 189/439 (43%), Gaps = 17/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + V +P + + ++ I +A + GFRPGK+P ++ ++GK
Sbjct: 1 MDSQLEQITSVECRIRVTVPWTDVGPRLDTKLRTIGRRARVPGFRPGKIPAKVLERMFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S E E+ +E ++ R +P + S +E D +++
Sbjct: 61 SARQELQGELFQETFETAIATHSTRPLTQPVLE---------SSSLEKGEDFSYSARFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAK---NNVAFEVKETESEIGDKVTVDY 177
P+IE + + V + DE ++D ++A+ + E ++ GD T+D
Sbjct: 112 APKIEPKDYKGVAVRRRPSVADEAKVDAELAKKQQELVEIRPIEGDRENTQAGDVWTLDI 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKT---GDQKEIERFFPEDHSIKD 234
S+ + L + + G+A++ L L G +E+ PED +
Sbjct: 172 DGSIGDSPLSRKDLEIEIGKEGAAEVVPGLAAALAELPLSAVGSARELSFTPPEDKVRAE 231
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKV 293
G +V+L ++++V + ++++ A E+ ++ + +++ + ++
Sbjct: 232 FKGAEVKLTAALRDVRETIVPELDDEFARDTGEAETLDELKEQIRENVRKEDADVAEREA 291
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
++++++ + F+ S++ NE +Q+ + +++ Q++ S D + +
Sbjct: 292 RQRLVEALLEANDFEPAPSMITNEVRAQVQQFKRQLAQQGMTLQHIGSSDAQMAENVRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A V ++L I + I++TEEE+ + + + + ++ +K L LR
Sbjct: 352 ATFNVKAFLLLEAIRDAEGIDITEEELDAEVKEMAEAQGQNPARLRATMEKNQQIL-ILR 410
Query: 414 APIFEDKVIDHILKSVQIV 432
A + E++++D ++ ++
Sbjct: 411 AQMREERILDFLMNEAEVT 429
>gi|290969191|ref|ZP_06560716.1| trigger factor [Megasphaera genomosp. type_1 str. 28L]
gi|290780697|gb|EFD93300.1| trigger factor [Megasphaera genomosp. type_1 str. 28L]
Length = 441
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 92/453 (20%), Positives = 186/453 (41%), Gaps = 20/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + K L + IP + +++ K NI GFR GK P ++S GK
Sbjct: 1 MNVTVNEVDRHKVTLHIEIPVKDASKMAVTACKNLAGKVNIPGFRKGKAPRMVLESFLGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E + I+ + PE L ++ P I + + D +
Sbjct: 61 DAVKQEIEEAIMNKAYPEALKEQKIDPVTDPEIQVVTA---------DKGKDFVFEATLT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDY 177
P++ + + +QV +DI + +++ID+++ + K + + T E D +D+
Sbjct: 112 KKPEVTLGEYKGIQVGKDIVNITDEDIDKEVKNLQKQHAKLLVAPEGTAIENEDFAIIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
S+D K +GS E L+GLK G++K+++ FPED+ LAG
Sbjct: 172 QGSIDGKPFAGGEGKAYPLEIGSHSFIPGFEEQLIGLKAGEEKDVKVTFPEDYHEAGLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ I +V +N++ A + FE+ +R ++I + +
Sbjct: 232 KEAVFAVKINDVKRRELPEINDEFAKEVGKFENVEELRNDVKKRIFTKVSLQAVETFNNE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHM 352
+L + T D+P+ +V+++ N ++ ++ ++ + + D + Y
Sbjct: 292 VLKTVMANATVDIPQVMVDDKVNQMVDEMAMKLQAQGMNLDAYLKYTKMDVAKLKEQYAA 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
AK V +VL + + +I+VTE+++ + +Y F K++ K + + L
Sbjct: 352 PAKENVKMDLVLEAVAKAEDIQVTEQDVNAEIYTMAQNFGADPKEVYKIILK-EHRVPLL 410
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
+ K IL +D +++ +
Sbjct: 411 IQSVGRKKAASFILSKA--IDTNEKKEEVKPEA 441
>gi|227824398|ref|ZP_03989230.1| cell division trigger factor [Acidaminococcus sp. D21]
gi|226904897|gb|EEH90815.1| cell division trigger factor [Acidaminococcus sp. D21]
Length = 439
Score = 185 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 83/438 (18%), Positives = 179/438 (40%), Gaps = 19/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + +G + L IP + F + + + I GFR GK P +++ GK
Sbjct: 1 MSVSVE-RKGNEATLKFTIPVEEVAKGFERAVARVNKQVTIPGFRKGKAPRRVLEAHVGK 59
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+I E + + + L + P + +E ++++ L
Sbjct: 60 DAIKEEAFQILANDNYRKALDDNNFIPVADPEL---------KDSTLEEGKEMEMTLLVT 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
+ P++E+ + +L V + + EV +K++D ++ + K ++ + E GD T+D+
Sbjct: 111 LRPEVELGEYKNLDVKKVVREVTDKDVDDAISNLQKRAAKLVDAPEDRKLEKGDLATIDF 170
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
++D E K +GS + +VGLK + ++ FPED+ K+LAG
Sbjct: 171 AGTIDGEPFEGGEGKGYPLEIGSGSFIPGFEDQMVGLKKDESTDVNVTFPEDYGAKELAG 230
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K ++ + V ++L ++ + R ++K+ E + +R
Sbjct: 231 KAAVFKVHVQNIKVREIPEVTDELIEKNSDSKTIAEFREKTLARLKKSEEDQSQANYERD 290
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++ +F+VPE +V N ++ ++ + + + Q + +
Sbjct: 291 VIKKAVENASFEVPEVMVTQRANQMVDELTMNLEAHHMSLPMYLQYLGKDVKTYRDEQKP 350
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
+A + +VL I +K +++VT+EE + + + ++ ++ +L L
Sbjct: 351 VALENLKADLVLDAIAKKEDLKVTKEETLAEMQKIADTQGATLHQVQKIIKEN-GSLPLL 409
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ I K D +L S +
Sbjct: 410 VSNIMRRKAADLVLSSAK 427
>gi|259046803|ref|ZP_05737204.1| trigger factor [Granulicatella adiacens ATCC 49175]
gi|259036571|gb|EEW37826.1| trigger factor [Granulicatella adiacens ATCC 49175]
Length = 433
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 74/438 (16%), Positives = 171/438 (39%), Gaps = 22/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E K L I + ++ ++ N+ GFR GKV + +YG+
Sbjct: 8 MTAKFEKVETNKVVLTFEISQEDIKKGLDQAFNRVKKNVNVPGFRKGKVSRQVFEKMYGE 67
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + + +P I I IE ++
Sbjct: 68 EALYQDALNILLPDAYDNAVEETGIFPVTQPKIDIES---------IEKGKPWVIKAEVI 118
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + L V + V E++++ ++ + VKE +E+GD V +D+
Sbjct: 119 VKPEVKLGEYKGLTVEKQDRTVSEQDVEDRLLQEQARAAELVVKEEAAELGDTVVIDFEG 178
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ E +N +GS + LVG K GD+ E++ FPE++ ++L G+
Sbjct: 179 FLGEEAFEGGKGENHSLELGSGSFIPGFEDQLVGAKEGDEVEVKVTFPEEYHAENLKGQD 238
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV + + ++ A E+ + ++ +++++ + V +
Sbjct: 239 AVFKVKVHEVKTKELPELTDEFAKDVDDSVETLAELKENFRKELEEAKAAAADEAVADEA 298
Query: 298 LDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
L ++P +V +E + ++ +M + + + +
Sbjct: 299 LRKAVENAEIVELPHEMVHDEVHRQMEHYLNDMRRNGISPEMYYQITGTTEADLHKMMEK 358
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A R T +VL I ++ IE T+E++ + + + ++ E + + L
Sbjct: 359 DADVRTKTNLVLEQIVKEEGIEATDEDVANEVKELAAQYGMEEDAVRAAVS-----VDML 413
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ I K + I +S +
Sbjct: 414 KNDIAMKKALAVITESAK 431
>gi|254415726|ref|ZP_05029484.1| trigger factor [Microcoleus chthonoplastes PCC 7420]
gi|196177432|gb|EDX72438.1| trigger factor [Microcoleus chthonoplastes PCC 7420]
Length = 491
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 86/482 (17%), Positives = 197/482 (40%), Gaps = 22/482 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + L++ IP+ + + ++++ ANI GFR GKVP + G
Sbjct: 1 MKVTQEKLPKSQLGLEIEIPAETTKKVYEKVVQNLARSANIPGFRKGKVPRQILLQRLGP 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I ++++++ + + LS+ A + + + L S D
Sbjct: 61 GRIKEAALEDLVQNSLRDALSQETIEALGNYQLVST---FEELLSQFQPGQPLTFSASVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P I + + +L V + + D +D +AE + + +++GD VDY
Sbjct: 118 VPPDINLGDYGNLSVQAEEVKPDPDAVDNFLAERQVQHATLIPVESRPAQMGDVTVVDYK 177
Query: 179 VSVDNV-----ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+ + + Q + ++ + +VG+ G+ KE+ FPED+ +
Sbjct: 178 GRLTPEGEEAVDISGGEATDFQLELEEGRFLADIVQGIVGMTPGETKEVSVTFPEDYPRE 237
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQK 292
DLA + ++KE+ +++D A E+ S +R +++ + +E +
Sbjct: 238 DLANQSAVFTLTLKELKEKELPELDDDFAQDISEEETISELRESLAKQFAEKAEQETKTN 297
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED--LQYY 350
+ +++ + + D+PE+L+ E IL + +M + Q V + + Q
Sbjct: 298 KENALIEALVAQVEIDLPETLIGQEIQTILTQTAIQMENYGMDLQKVFTAEMMPQLRQRS 357
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A R+ + L + ++ ++ V +E+M + + + + G + P L
Sbjct: 358 RPDAIARLRQSLALEELAKRESLTVDDEQMDAKCQEVMKQLAGQDV--------DPQRLR 409
Query: 411 E-LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
E +++ + ++K I + + I + + + E++ + ET EA
Sbjct: 410 EFVKSDLLKEKAIQWLEEHATIELVPEGSLETEETTEETTDTPETGSEASEETTAQPEAT 469
Query: 470 SE 471
++
Sbjct: 470 AD 471
>gi|302390304|ref|YP_003826125.1| trigger factor [Thermosediminibacter oceani DSM 16646]
gi|302200932|gb|ADL08502.1| trigger factor [Thermosediminibacter oceani DSM 16646]
Length = 446
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 84/442 (19%), Positives = 191/442 (43%), Gaps = 17/442 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E L + + ++ + + + + NI GFR GK P I+ YG
Sbjct: 1 MKVNVEKIENNVATLKIEVGADEFEKALEQAYKKNVKRFNIPGFRRGKAPRRLIEMHYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + ++ E + + + + P I++ IE +
Sbjct: 61 EVFYEDAAEIVLSEAYKKGVEENNLEPVDHPHFDIDQ---------IEKGKGIVATAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + L+V + + V E+++++++ + + N E ++ GD V VD
Sbjct: 112 VKPEVDLGEYKGLEVEKMVYNVTEEDVEKELKALQEKNARLISVERAAQKGDIVIVDLEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D L+D +N +GS L + E + G+ G+ +E++ +P DH K+LAGK+
Sbjct: 172 FLDGKPLKDGKVQNYPMELGSKILVEDLEEQIAGMNAGETREVKVTYPADHPNKELAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V ++KE+ V++++ A F++ ++ K+++ ++ ++ IL
Sbjct: 232 VLFKVTLKEIKEKELPVIDDEFAKDVSEFDTLQELKQDIKNKLEERAKSFAESSLRGSIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLA 354
++ + D+P+++++ E ++ F++ + EE + A
Sbjct: 292 KKLTEQAKVDIPQAMIDREIERLIMDFAFQLRLRGMDLKEYLEASQLSPEEFKAKFQDRA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
V T +VL + + NIEV+EEE+ L + + ++ L ++
Sbjct: 352 YENVKTSLVLEAVAKAENIEVSEEELDDELSKYAEAAQKSLAEYKKGLKE--ENLEYIKD 409
Query: 415 PIFEDKVIDHILKSVQIVDRKV 436
I K+ D + ++ ++ V
Sbjct: 410 RILTRKIFDFLKSHAKVTEKVV 431
>gi|239907454|ref|YP_002954195.1| trigger factor [Desulfovibrio magneticus RS-1]
gi|259533595|sp|C4XH04|TIG_DESMR RecName: Full=Trigger factor; Short=TF
gi|239797320|dbj|BAH76309.1| trigger factor [Desulfovibrio magneticus RS-1]
Length = 440
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 83/438 (18%), Positives = 181/438 (41%), Gaps = 13/438 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ +K ++ V +P+ + + RS+ ++KGFR GKVP S ++ + K
Sbjct: 1 MEYTVNQLSPVKTQVTVSVPAEEANAALASAVAMFRSRTDLKGFRKGKVPSSVVEQRFKK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I+SE ++I + EI+ + D++ + L+ S++
Sbjct: 61 EIVSEATTDLINVHINEIMGELKLSPLS---------GLDVSEAALTKGEPLEYTFSFEH 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
P ++ + V ++ V E +I+ + + KN + ++ G+ V+V +
Sbjct: 112 APAFDLPEYKGQAVEEEDVVVSEADIESVIERVRKNLAEVKPLSDNRPAKDGEIVSVTFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D + +N + +G E++ + +G++ E + FP D +LAG+
Sbjct: 172 AFEDGKAIPGVRAENFELTLGEGQALPAFEELVKTIASGNEGEGDVTFPADFINTELAGR 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + ++ + V+++LA + FE+ MR + K+ E L R ++++
Sbjct: 232 TVTMKVAVHVIKERTLPPVDDELAKKAGNFENLDKMREAITMSYKKSREDLHRSSAQKKL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + F +P ++VE + ++++ ++ + ++ + A+
Sbjct: 292 LDSLLATLDFPLPPAVVEQQLGQMVEEFVGQLERRGKSLESTGKTLADIQGEMRPRAEEL 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V T I L + K + VT +EM + Y+ + ML + + + +R +
Sbjct: 352 VKTQIFLSAVALKEELTVTPQEMDAFFYRLSTQAGQDV-IMLKRYYEDNGLMIMVRDKLL 410
Query: 418 EDKVIDHILKSVQIVDRK 435
DK D I + +
Sbjct: 411 CDKAADLIYANALVTKVA 428
>gi|253579816|ref|ZP_04857084.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848815|gb|EES76777.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 428
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 186/437 (42%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + L + + + + +I GFR GK P I+ +YGK
Sbjct: 1 MSLQVEKMEKNMAKLTIEVAAEDLEKAMQNAYQKAKGRISIPGFRKGKAPRKMIEQMYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ L + ++ +I E + L++ + +P+I I + E
Sbjct: 61 GVFLEDAVNALIPEHYSKALAECELEIVSQPTIDITQA---------EPGKAFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++ + + ++V + V +++++ ++ + + N ++ +++ D VT+D+
Sbjct: 112 VKPEVTLGDYKGVEVPKTEITVTDEDVEAELKKEQEKNSRTISVEDRAAQLNDIVTIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + +GS E LVG K GD +++ FPE++ K+LAGK
Sbjct: 172 GSVDGVPFDGGQATEYPLTLGSNTFIPGFEEQLVGAKVGDDVDVKVTFPEEYQAKELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K++ + +++D A F++ + + ++ ++ +
Sbjct: 232 EAIFKCAVKKIEAKELPELDDDFAKDVSEFDTLAEYKEHVKTNLEDKKADEAKRAKEDAA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+D D+PE+++ + +L M S Q Q ++ ++
Sbjct: 292 VDKAIENAQMDIPEAMLMTQCRQMLDDFSRRMQSQGLSMDQYFQFTGMTADKMMEDMKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL + E NI+ TEEE+ + + + K+ + + L +++
Sbjct: 352 ALKRIQTRLVLEKVAEVENIQPTEEEVNEEISKMAEAYKMEADKLKELLGERE--LEQMK 409
Query: 414 APIFEDKVIDHILKSVQ 430
+ K + I + +
Sbjct: 410 KDMAVQKAVTVIADAAK 426
>gi|307244040|ref|ZP_07526159.1| trigger factor [Peptostreptococcus stomatis DSM 17678]
gi|306492564|gb|EFM64598.1| trigger factor [Peptostreptococcus stomatis DSM 17678]
Length = 427
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 92/438 (21%), Positives = 194/438 (44%), Gaps = 17/438 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ EG ++ I + + ++ + +S+ NI GFR GK P I+ YGK
Sbjct: 1 MKPELIKKEGYSVNFEIAIDAAEFEGAIDKAYKKTKSRYNIAGFRKGKAPRKIIELNYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ ++ +D ++ E+ P + + +PSI I E + D + L+
Sbjct: 61 GVFFNDALDILLPEVYPTAVDELGLYVVSQPSIDIKEVKEDGSLVLVVDVDV-------- 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P++ + ++ +++ + EV E +ID ++ + + E E G+ +D+
Sbjct: 113 -RPELTVENYKGVEIEKVDAEVTEDQIDDELKALVERQSRMVDTEGPIENGNIAVIDFKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D E + + VGS + LVG K G++ ++ FPED+ ++LAGK
Sbjct: 172 LLDGETFEGGTSEGYSLEVGSGTFIPGFEDQLVGKKAGEEINVDVTFPEDYPAEELAGKP 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V IKE+ +++D A FES ++ +++ ++ + +++ +++
Sbjct: 232 VVFEVKIKEIKVKELPDLDDDFAKDTTEFESLEELKNDIKANLQKKADEEAKNEMRNKVV 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLA 354
+ I+ D+P S+VEN+ + + ++ ++S + + EE + A
Sbjct: 292 EKIAETVEVDIPNSMVENQLDNQMNEINMQLSYQGWSLEKFAELSGQTLEEIREARRDEA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
K V +V+ I E N+EVTE ++ + L + +K+ + P+ + A
Sbjct: 352 KALVKNSLVIEKIAELENVEVTEADIDADLENMANMYGLELEKIKEVVG--PDEREGIIA 409
Query: 415 PIFEDKVIDHILKSVQIV 432
+ K +D +L++ +
Sbjct: 410 RLKNTKTVDMLLEAAVLK 427
>gi|154506031|ref|ZP_02042769.1| hypothetical protein RUMGNA_03573 [Ruminococcus gnavus ATCC 29149]
gi|153793530|gb|EDN75950.1| hypothetical protein RUMGNA_03573 [Ruminococcus gnavus ATCC 29149]
Length = 428
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 83/436 (19%), Positives = 178/436 (40%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L V + + + + R + NI GFR GKVP I+ +YG
Sbjct: 1 MSLQVEKLEHNMAKLTVEVAAEDVEKALQAAYLKQRKQINIPGFRKGKVPRQMIEKMYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E + +I + + + + +P I + + E
Sbjct: 61 EVFYDEAANNMIPDAYAKAYDESELDIVSQPKIEVVQM---------EKGKPFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
P++ + + L+V + V +KE+D ++ + + N EV + + D+VT+D+
Sbjct: 112 TKPEVTLGDYKGLKVDKVSTRVTQKEVDEEIEKERERNARTIEVTDRAVQDKDEVTLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E ++ +GS E L+G + + E+ FP+++ ++LAGK
Sbjct: 172 GFVDGVAFEGGKGEDYPLTIGSGSFIPGFEEQLIGAEIDKEVEVNVTFPKEYHSEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ + + ++++ A E+ A R + IK+ E ++K + Q
Sbjct: 232 DATFKCTVHTIKAKELPELDDEFASEVSECETMDAYRAEVKKNIKERKERTGKEKKENQA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+D D+PE+++E + + + Q Q E+ L+
Sbjct: 292 VDQAIENAQMDIPEAMIEFQVRQMADDFARRIQQQGLTVEQYFQFTGMTAEKMLEEMRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ + T +VL I + NIEV++E ++ L + + +K+ + + +++
Sbjct: 352 AEKSIKTRLVLEAIVKAENIEVSDERVEEELTKMAEAYQMEVEKLKEFMGENE--KKQIK 409
Query: 414 APIFEDKVIDHILKSV 429
+ + I ++
Sbjct: 410 EDLAVQEAITLLVNES 425
>gi|329121860|ref|ZP_08250475.1| trigger factor [Dialister micraerophilus DSM 19965]
gi|327467798|gb|EGF13290.1| trigger factor [Dialister micraerophilus DSM 19965]
Length = 485
Score = 184 bits (467), Expect = 2e-44, Method: Composition-based stats.
Identities = 83/437 (18%), Positives = 186/437 (42%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + + K L + + + + F + + I ++ N+ GFR GK P ++ +GK
Sbjct: 1 MKVKVEALDQHKVSLHIEVEAEAVAKGFKQAVSRISNRVNVPGFRKGKAPRKTLEMRFGK 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+I+ +E D +I + + E L++ +P DI + + ++
Sbjct: 61 AIVAAEAQDIVINKAMNEALAENKLVPVTQP---------DIKADVFSEKEGATFTATFV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P +++ + L+V + ++ +++++ Q+ A+ + + + + E GD V +D+
Sbjct: 112 KQPDVKLGEYKGLEVEKHDVKITDEQVEEQLKMAAQQSARLKVVPEGSAVEKGDYVFIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+VD E K +GS + L G K GD ++ FP+ + +L
Sbjct: 172 KGTVDGKPFEGGEGKGYPLEIGSNSFIPGFEDQLKGHKAGDDVTVKVKFPKPYFKAELEN 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K I +V +N++ A + FE+ +R Q+++ + ++
Sbjct: 232 KDAEFAVHINDVKRKEVPELNDEFAKSVGKFETIKDLRDSLKQQMQLQAVQQAEDMYRQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+++ D+P+ +++ + I+ +++ M + N +NV+ +EE + Y
Sbjct: 292 LVEKAVANSEVDIPKEMIDQRIDEIISEMKLNMQARNLDFDTYLKNVNKTEEEFRKQYEE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A + V ++LG I +K + VT+ ++ +Y +F K +++ K N + L
Sbjct: 352 NAAKEVRQSLILGAIADKEKLTVTDNDLSMEVYFMAQQFNAEPKDVVNII-KEENRVGML 410
Query: 413 RAPIFEDKVIDHILKSV 429
+ K I
Sbjct: 411 VDNVRRKKAAAFIFGEA 427
>gi|254467956|ref|ZP_05081362.1| trigger factor [beta proteobacterium KB13]
gi|207086766|gb|EDZ64049.1| trigger factor [beta proteobacterium KB13]
Length = 435
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 109/447 (24%), Positives = 205/447 (45%), Gaps = 15/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++R++ I L + +R + A I+GFRPGK P+S I+ YG
Sbjct: 1 MTQAVEKISDIERKVKGKIIIAPLENEIKQRFIQVSKNAKIQGFRPGKAPMSIIEKQYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I SE + I+ +I+ + P I L E D + ++++
Sbjct: 61 DIRSEVYSKAIENQFGQIVQENKLNIVGMPQIN--------HDPLPEIKDDFEFTATFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P ++ F +++ Q ++ +K++D + ++K F+ + SE+GD+V +
Sbjct: 113 VPDVKDIDFKKIEILQPDVKLTKKDVDATIDVMSKQRATFKKVDRASELGDRVGLKLESF 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D E + + FI+G + + LVGLK D K+ E +P+DH LA KKV
Sbjct: 173 IDGKSAESTGSQTLNFILGDKNRLEVFDKELVGLKASDMKDFEIHYPKDHEPAQLADKKV 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ I EV ++ D A LG + M+ + + + E VR K K Q+
Sbjct: 233 KYTVVINEVNEMELPKIDADFAKSLGVDSGDVDEMKKQIEESLAEEVEKRVRLKEKDQVF 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ F++P+S+++NE ++Q++ M K++++ + A++
Sbjct: 293 VELVKHAKFELPKSIIDNESYRLMQQMIENMERQGAKAKDLKLEPSMFNE----RAEQTA 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L + EK + TEE+++S + + + +K + F + L E A E
Sbjct: 349 RLRIILAHLVEKEKLHATEEQVKSKIEEFSKSY-DEPEKAVQWFYEKQERLNEPAALATE 407
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNS 445
D V++ +LK+ +I KV+FD+L N+
Sbjct: 408 DNVVNFVLKACKIKKEKVSFDELMGNN 434
>gi|283779541|ref|YP_003370296.1| trigger factor [Pirellula staleyi DSM 6068]
gi|283437994|gb|ADB16436.1| trigger factor [Pirellula staleyi DSM 6068]
Length = 493
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 72/438 (16%), Positives = 177/438 (40%), Gaps = 11/438 (2%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
V + +R + V + ++ + + +D+ KA + GFR G+ P +++ + I
Sbjct: 24 VKVEKPSACERHVKVSVSADDVKRYLKDAFDDLGPKAEVPGFRAGRAPRKLVEARFRDQI 83
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
+ +++ + + +I D A P + ++ + + + ++ P
Sbjct: 84 ADQVKGKLLMDSMTQISEDHDFSAISEPDF-------NFSAVDLPTDGPMSFEFNIEVRP 136
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVD 182
+ ++ + L++ + + E E E+ + + ++ ++GD V + D
Sbjct: 137 EFDLPEWKGLKIERLVHEYTEDEVTQHLNKLLARYATQVESTEPIQMGDLVACEMHFQKD 196
Query: 183 NVI--LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+++ + + + S E++VG GD+ + D + L G +
Sbjct: 197 GACLAHFNETLEVREVLSLSDTKVENFGELMVGKNIGDEAKTTVTISADAENETLRGVTL 256
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
L+ I V + +N R+ GF S +R +++ + + +++V++QI
Sbjct: 257 DLSIHIVGVQTRKLPDLNEGFLDRIGGFASVDELRAEVKKELDRQLSYQQQRQVRQQITS 316
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
++ +D+P +++ + L++ E+ S+ + + + + Q R +
Sbjct: 317 TLTVAANWDLPPAMLRRQARRELERAVMELQSSGFGNDMIKAYANQLQQNAMAETARALK 376
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+L I E +I+ ++ + + + +K+ +K + LR I E
Sbjct: 377 EHFILERIAEDQSIDAEPQDYDNEIRLLAEQSDESPRKVRARLEK-RGLMDTLRNQIIER 435
Query: 420 KVIDHILKSVQIVDRKVT 437
KVID I KS + D+ T
Sbjct: 436 KVIDVITKSAEFTDKPYT 453
>gi|160878534|ref|YP_001557502.1| trigger factor [Clostridium phytofermentans ISDg]
gi|189035934|sp|A9KSW9|TIG_CLOPH RecName: Full=Trigger factor; Short=TF
gi|160427200|gb|ABX40763.1| trigger factor [Clostridium phytofermentans ISDg]
Length = 428
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 73/437 (16%), Positives = 170/437 (38%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +L + + + + + + K N++GFR GK P + I+ +YG
Sbjct: 1 MSFKVEDLGKNMVKLTIEATAEDFDKAIEQAYQKNKGKMNVQGFRKGKAPRAIIEKMYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + II E + + + RP I + + +E
Sbjct: 61 GVFYEDAANFIIPEAYEQAIEESKLDVVARPEIDVVQ---------VEKGQPFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNN-VAFEVKETESEIGDKVTVDYT 178
+ P++ + ++ ++V++ EV E EI ++ ++ + N V++ D VT+D+
Sbjct: 112 VKPEVTLGAYKGVEVSKSEIEVTEDEIMAELDKVREQNSRTITVEDRAVMDKDIVTIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E ++ +GS + LVG G+ E+ FP ++ DLAGK
Sbjct: 172 GFVDGVAFEGGKGEDYALTIGSHSFIDTFEDQLVGKNIGEDVEVNVTFPTEYHAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+KE+ + +++ A F + + + + + + + + +
Sbjct: 232 PALFKVKVKEIKAKELPAADDEFAGDVSEFNTLEEYKADLKKSLTEKKDKAAKTAKEDAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHML 353
+D + T ++P+++V+ + + + + + ++
Sbjct: 292 VDKVIENATMEIPDAMVDTQKRQMAEDFAQRLKMQGLSLEQYFQFTGLNPNTFMENLGPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ + +VL + + NI V+ EE+ L + + K+ + + ++
Sbjct: 352 ALKRIQSRLVLEAVVKAENITVSVEEIDKELAEMASAYQMEVDKLKELIGEKE--KEQIV 409
Query: 414 APIFEDKVIDHILKSVQ 430
+ K ID + +
Sbjct: 410 MDMAVQKAIDLVASEAK 426
>gi|4927442|gb|AAD33111.1|AF094574_1 trigger factor [Haemophilus influenzae]
Length = 305
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 62/314 (19%), Positives = 149/314 (47%), Gaps = 11/314 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++GL+R + + +P+ ++ + E + + GFR G VP I+ +G
Sbjct: 1 MSLNIETTQGLERRVAITVPTEIVSKAVREEFKRAAKNVRVDGFRKGHVPAHIIEQRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++++ + + A RP+ I E DL ++++
Sbjct: 61 SIRQDVLNDLLPRHFFDAVIAEKINIAGRPTFAIET---------FEEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++++V + E+ E +ID+ + + K + + + D+VT+D+ S
Sbjct: 112 YPEVKLQGLENIKVEKPTVEITEADIDKMIDVLRKQQATWAESQDVVKADDRVTIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + +G + E +VG K G+Q +I+ FP ++ ++L GK
Sbjct: 172 VDGEEFEGGKATDFVLFMGQGRMIPGFEEGIVGHKAGEQFDIDVTFPAEYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K++ + + + ++ + G ++S +R + +++ + + +VK+Q++
Sbjct: 232 KFAITLKKIENMVLPELTDEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVI 291
Query: 299 DYISNKYTFDVPES 312
+ + + DVP S
Sbjct: 292 NGLIEQSPIDVPVS 305
>gi|331082574|ref|ZP_08331699.1| trigger factor tig [Lachnospiraceae bacterium 6_1_63FAA]
gi|330400552|gb|EGG80182.1| trigger factor tig [Lachnospiraceae bacterium 6_1_63FAA]
Length = 436
Score = 184 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 88/447 (19%), Positives = 186/447 (41%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + + + + R K I GFR GK P I+ +YG
Sbjct: 1 MSVQVENLEKNMAKLTIEVSAEEFEKAVQNAYLRSRGKITIPGFRKGKAPRVMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + +I+ P+ + +P I + + IE
Sbjct: 61 GIFFEDAANALIQAEYPKAADESGLEIVSQPEIDVVQ---------IEKGKSFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++ + + L+V +V E+EI ++ +NN + GD VT+D+
Sbjct: 112 VKPEVTLGEYKGLEVEVSPADVTEEEIAAELKREQENNSRTIDVDDRAVADGDMVTLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E + +GS E LVG + G +KE+ FPE++ DLAGK
Sbjct: 172 GFVDGVAFEGGKGTDYPLTIGSNSFIPGFEEQLVGAEIGVEKEVNVTFPENYHANDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A F++ A + +K+K+ E + +++ + +
Sbjct: 232 AAVFKCTVKAIKVKELPELDDEFAKDVSEFDTLDAYKADIEKKLKERKEAVAKREREDKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+D + D+PE++++ + ++Q M + Q Q + + +
Sbjct: 292 VDAVIENAQMDIPEAMIQGQIQQLMQDFVRRMQAQGLSIDQYYQFTGLDNAKIQEQMRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ + +VL I E NI++++E+ + L + +K+ + Y +++
Sbjct: 352 ALKRIQSRLVLEKIAETENIQISDEKFEEELKAMADMYKMEVEKLKEVMGDYE--KEQIK 409
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQ 440
+ + + + +S ++V++K +
Sbjct: 410 KDMAVQEAVTLVAESAKVVEKKEEKAE 436
>gi|227488325|ref|ZP_03918641.1| trigger factor [Corynebacterium glucuronolyticum ATCC 51867]
gi|227542939|ref|ZP_03972988.1| trigger factor [Corynebacterium glucuronolyticum ATCC 51866]
gi|227091735|gb|EEI27047.1| trigger factor [Corynebacterium glucuronolyticum ATCC 51867]
gi|227181161|gb|EEI62133.1| trigger factor [Corynebacterium glucuronolyticum ATCC 51866]
Length = 446
Score = 184 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 76/439 (17%), Positives = 181/439 (41%), Gaps = 20/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + ++ V +P LT ++ + + + KGFR GK P I + +G+
Sbjct: 1 MKSSVDKLNDTRVKITVEVPFEELTPEIDQAYKALAQQVTFKGFRKGKAPRKLIDARFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + +++++ + + D R +P+I I + +E ++ D
Sbjct: 61 GPVLEQVVNDMLPSRYGKAVEDNDLRPLGQPAIDITK---------LEDGKLVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I I F ++ +V ++++D+ + + + + + +++ D VT+D
Sbjct: 112 VRPEITIPDFSTYEIEVPELKVTDEDVDKAIDSLRERFAELKAVKRKAKKDDFVTLDLKA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD +E+ + + + +GS +L + + GLK G++ GK+
Sbjct: 172 TVDGEEIEEAATEGLNHRIGSDELIDGLDKAVKGLKAGEEATFTSSDLNGVED----GKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K+V V+ D F++ +R + + + + ++ ++L
Sbjct: 228 AEVTVTVKDVKERKLPKVDEDFVQMVSEFDTVEELREDTEKNLTEQKKVEQASAIRDEVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ----NVDSIDEEDLQYYHMLA 354
++ F +PE++VE + G LQ++ + + EE + A
Sbjct: 288 KKALDEADFPLPEAVVEEQVQGQLQQLIAQFGGDESMLDRVLDMQGTTREEFDKESRENA 347
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V T + L + E+ +VT++E+ + R+ + ++ L + L A
Sbjct: 348 ENAVRTQLFLDVLAEQEKPDVTQQEIHEHIMFTAQRYGMNPQQFLQQ-IQQTGQTYNLVA 406
Query: 415 PIFEDKVIDHILKSVQIVD 433
+ K + + V + D
Sbjct: 407 DVRRGKALATAICRVSVKD 425
>gi|302545415|ref|ZP_07297757.1| trigger factor [Streptomyces hygroscopicus ATCC 53653]
gi|302463033|gb|EFL26126.1| trigger factor [Streptomyces himastatinicus ATCC 53653]
Length = 483
Score = 184 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 86/465 (18%), Positives = 184/465 (39%), Gaps = 21/465 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L S + + I + + GFR GK+P I +G+
Sbjct: 1 MKSAVENLNPTRVRLTVEVPFEELKPSLDAAYKKINQQVTVPGFRKGKIPARIIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEGELNPLGQPEVDITE---------LKDNELLTFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P +EI + ++VT D EV +++ID+ + ++ E + GD V +D
Sbjct: 112 IRPTVEIPDYSGIEVTVDSVEVSDEDIDKSVEQLRDRFATTSPVERAAAEGDIVVIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED + V + +GS +L E + GL+ G F + G++
Sbjct: 172 KVDGEVLEDGVAEGVTYTIGSGELLDGIDEAVTGLEAG----GTATFASELKGGSAQGQE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + EV + +++D A F++ +R ++++Q ++ + + ++L
Sbjct: 228 AEVSVKVNEVKARELPELDDDFAQLASEFDTLEELREDSRKRLEQSKKYDQATQAQEKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
D + +PE L+E+E + + EE
Sbjct: 288 DALLELVEVPIPEKLLEDEIQTRKHNLEHHQLGQMGLNLESYLELQGKSAEEFDAELKEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ + T VL + K + V +EE+ L ++ + + + L
Sbjct: 348 AEKGIRTQFVLDELVNKEKLSVGQEELTEHLMRRAQSSGMSPDQFAQQVVE-GGQVPMLV 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSS 458
+ K + ++++ ++VD K L D + + +
Sbjct: 407 GEVARGKALAVVVEAAKVVDDKGETVDLDDEDETAETVEAAAEGD 451
>gi|326771858|ref|ZP_08231143.1| trigger factor [Actinomyces viscosus C505]
gi|326637991|gb|EGE38892.1| trigger factor [Actinomyces viscosus C505]
Length = 452
Score = 184 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 79/442 (17%), Positives = 179/442 (40%), Gaps = 26/442 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + + +L V +P L S + ++I S+ + GFR G VP I G+
Sbjct: 7 KTTVENLDPSRIKLTVEVPYEELKPSLDAAYKEIGSQIQVPGFRRGHVPNRVIDQRVGRG 66
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E ++ + + + +++ + ++P + + E + + E L +
Sbjct: 67 TVIQEAVNNKLSDFYRDAITEAERVPMLQPEVDVVE----LPNATGENGGQLAFTAEVTV 122
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P IE+ ++T D EV ++++D ++ + + + +++ GD VT+D
Sbjct: 123 RPVIELPDLSKAKLTVDAVEVTDEDVDTELDNLRARFGSLKSVGRKAKTGDFVTIDLKAV 182
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D ++ S V + +G ++ L GLKT + F + + + AG++
Sbjct: 183 IDGEEVDSISG--VSYEIGKGNMLKGLDTALRGLKTDE----SATFTTELAGGEHAGEQA 236
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + V V+++ A F++ +R +++ + + +L+
Sbjct: 237 EVTVTATAVKQRELPKVDDEFAQLASEFDTVEELREDLVKQVTERKTGEQAVAARDALLE 296
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
++ ++ FDVPE++VE E L+ DEE + V
Sbjct: 297 HLRSEVAFDVPEAVVEAEVAQHLR-------------AEGKDGDEEHAKEIREDIVNGVR 343
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
I+L + E + V ++E+ L+Q ++ + L Q+ + + + +
Sbjct: 344 DQIILDVLAEDLKVGVAQDELLEFLFQTAQQYGMEPAQFLQGAQQ-AGQIPAFVSEVARN 402
Query: 420 KVIDHILKSVQIVDRKVTFDQL 441
K + L+ +VD K L
Sbjct: 403 KSLAMALRQAAVVDSKGETVDL 424
>gi|254480558|ref|ZP_05093805.1| trigger factor [marine gamma proteobacterium HTCC2148]
gi|214039141|gb|EEB79801.1| trigger factor [marine gamma proteobacterium HTCC2148]
Length = 388
Score = 184 bits (465), Expect = 4e-44, Method: Composition-based stats.
Identities = 76/399 (19%), Positives = 187/399 (46%), Gaps = 15/399 (3%)
Query: 55 KSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKL 114
+ +G + E + E++ + E + + R A +PSI ++ DL+
Sbjct: 2 RQRFGPGVRQEVLGEVMSQSFQEAVIQEKLRPAGQPSIEPKS---------LDAGKDLEY 52
Query: 115 RLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVT 174
++++ P +E++ + V + + EV E+++D + K + E + GDKV
Sbjct: 53 VATFEVFPDVEVTEMVEFNVEKPVAEVTEEDVDNIIEVFRKQQGNWNAVERAAIDGDKVN 112
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+D+ + + E S + + +GS + + +VG K G++ + FPED+ +D
Sbjct: 113 IDFAGTREGEAFEGGSAEGSELELGSGRMIPGFEDGVVGAKAGEEVTLALTFPEDYQSED 172
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQK 292
L G V ++ V +P +N +L + G E E R ++ + + + + K
Sbjct: 173 LQGAAVEFKVTVNAVEEMVPAELNEELFSQYGVEEGGEEQFRKEVAENMARELKNAIDAK 232
Query: 293 VKRQILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
VK+Q++D + + + ++P +L+ E + + ++ + A Q++D +
Sbjct: 233 VKQQVMDAVVDAHEGVEIPRALIAQEVDALRNQMFQQFGGAG--GQDMDLKSLLPDDMFT 290
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++RV G+VL + K ++ ++++S + + + +++++ + + LA
Sbjct: 291 ENAQKRVKLGLVLAELIGKFELQADGDKVRSTIEEMASTY-QEPEEVVNWYYSNQDQLAS 349
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
+ + + ED+V++ +L+S +I +++ ++ + + +
Sbjct: 350 VESKVLEDQVVEKLLESAKIAEKECSYQEAIAPAGQEEA 388
>gi|56416579|ref|YP_153653.1| trigger factor [Anaplasma marginale str. St. Maries]
gi|56387811|gb|AAV86398.1| trigger factor [Anaplasma marginale str. St. Maries]
Length = 466
Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 194/448 (43%), Gaps = 21/448 (4%)
Query: 1 MQ----VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKS 56
MQ V E S+ LKR + + + L ++R+ +I + + GFR GKV L ++
Sbjct: 26 MQRFYVVKEVLSDKLKRVYEFTVGNEYLEQQVDDRLREIAANVRMDGFRKGKVSLDLVRR 85
Query: 57 LYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL 116
G+ ++ E + +++ + + + + + + I DL L
Sbjct: 86 NCGEDVVREVLSKVVDDASSQFMQEGGFGDVVTSEVRITSHPK--VCSTEGKGGDLVYEL 143
Query: 117 SYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI---GDKV 173
++++P++ + +++ + + E+ ++++D+ + E+ F ++ + GDKV
Sbjct: 144 QFELMPEVPSINPEEIALKEMEAEIGQEDVDKFIGELKTRYPNFVASDSPKQRAAAGDKV 203
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+DY S L S K ++G L E + + G+K GD KE + FP D+ ++
Sbjct: 204 VIDYNSSFKGKALRGGSAKGFVAVLGGGHLPKEFEDKITGMKVGDVKEFKLGFPSDYRVR 263
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
AGK+V ++ + + P V + +LA GF M ++ +K F+ +
Sbjct: 264 LFAGKEVEMSVKLVSIMVPKDVGDHEELAKSCGFGCAEDMVNFATESLKGRFAFMSDALM 323
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
++++ D++ Y VPES+V E I +++ ++
Sbjct: 324 RKELFDHMETIYQGQVPESVVSQESARIRRELA------------PSELEAMGEDGILKE 371
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+RRV G++L + + NNI V ++ + + + + +L + +R
Sbjct: 372 AERRVRLGMLLMKVSQDNNIAVEARDISAFVQSNYLNYGASLESVLKLLRSNQGVRDHIR 431
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ EDKV+ +++ + + V L
Sbjct: 432 GKVLEDKVVRYMVAKAKKERQNVPAGDL 459
>gi|299822629|ref|ZP_07054515.1| trigger factor [Listeria grayi DSM 20601]
gi|299816158|gb|EFI83396.1| trigger factor [Listeria grayi DSM 20601]
Length = 428
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 86/437 (19%), Positives = 182/437 (41%), Gaps = 20/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG L I +++ + ++ +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKKEGNVGTLTFEIEQSKIKEGLDKAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + + P + + E D L
Sbjct: 61 EALYQDALDILLPEVYSDAVDEAGIDPVDTPQVNVESMEKD---------QTWVLSAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + L+V + + ++E+D ++ + + +KE + GD V +D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRDPALTDEEVDAELKSMQERQAELVIKEDAATDGDTVVLDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D E +N +GS E LVGLK D+KEI FPE++ +DLAG++
Sbjct: 172 FKDGEPFEGGKAENHSLEIGSGQFIPGFEEQLVGLKADDEKEITVTFPEEYHAEDLAGQE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV + ++++LA ES + ++ ++++++ E V+Q + ++
Sbjct: 232 AVFKVKVHEVKTKEVPELDDELAKDIDEEVESLAELKEKVTKRLQEAKEDSVKQAKQDEV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ ++P S++ +E + ++ ++ + + E
Sbjct: 292 VAKAVENAEVEIPHSMIHHEADHLMSHFTQDLQAQGLTPELYYQFTGQTAEGMHDQMEQD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV +VL I E IE E E+ + + + + L EL+
Sbjct: 352 AEKRVKMNLVLEAIAEAEGIEPAEAEIDEEVSTLAENYNMEKDAVRAAL----GDLKELK 407
Query: 414 APIFEDKVIDHILKSVQ 430
A + K I+ ++ S +
Sbjct: 408 ADLKIRKAIEVLVDSAK 424
>gi|300214431|gb|ADJ78847.1| Trigger factor (TF) [Lactobacillus salivarius CECT 5713]
Length = 436
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 87/450 (19%), Positives = 185/450 (41%), Gaps = 24/450 (5%)
Query: 1 MQVIEKFSEG-LKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M + + +G + +L I ++ + N ++ N+ GFR GKVP +YG
Sbjct: 1 MSIKWEKKDGTNEGKLTFEIAPEKIKEGLNSAFNRVKKSLNVPGFRKGKVPRQIFNKMYG 60
Query: 60 KS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + E +++++ E + + D +P I + ESD L
Sbjct: 61 EEALYQEALNDLLPEAYSNAVKEADINPVDQPQIDVESMESDAA---------WVLTAKV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDY 177
+ P++E+ + DL+VT+ V + +I+ ++ + + ++ +E GD V +D+
Sbjct: 112 TVEPEVELGQYKDLEVTKHPTRVLKADIENELNRLQQQEAELVLKEDEPAEQGDTVVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D + +N +GS + LVG K G++ + FPED+ KDLAG
Sbjct: 172 EGKIDGETFDGGKGENHSLELGSGQFIPGFEDQLVGHKAGEEVAVTVTFPEDYQAKDLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K+ + I EV + ++++ A + ++ ++K + ++
Sbjct: 232 KEAVFDTKIHEVKTKELPELDDEFAKDVDEDVATLEELKAKIKDRLKDQKVAEAKAAIQE 291
Query: 296 QILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYY 350
+ LD T ++P ++E++ + + M + Q + ++ + +
Sbjct: 292 EALDIAVENATIGEIPAVMIEDDVHRQMDNFLAGMQNQGISADMYYQLTGTSADDLHKQF 351
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A++RV T +VL I + IE +E+E+ + + ++ E +
Sbjct: 352 EEGAEKRVKTNLVLEAIVKAEKIEPSEDEINAEIKSLAEQYQMDEAAVRSALSDD----- 406
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
L+ I KV+D I S + ++
Sbjct: 407 MLKHDIAVRKVVDEIADSAKQTRDAKKDEE 436
>gi|319939843|ref|ZP_08014199.1| trigger factor [Streptococcus anginosus 1_2_62CV]
gi|319811056|gb|EFW07371.1| trigger factor [Streptococcus anginosus 1_2_62CV]
Length = 427
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 173/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFESKETNRGVLTFTISQEQIKPELDRVFNSVKKTLNVPGFRKGHLPRPVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ +T++ ++ + + + +P + +E D +
Sbjct: 61 EALYQDTLNALLPAAYEAAVKEAEIEVVAQPQFDV---------ASMEKGQDWTITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + ++D ++ N +KE ++ GD V +D+
Sbjct: 112 TKPEVKLGEYKNLEVSVDVSKEVSDADVDARIERERNNLAELVLKEDKAANGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD V + N +GS + LVG G+ E+ FPED+ DLAGK
Sbjct: 172 GTVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGHAAGETVEVNVTFPEDYQATDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +I EV ++++LA E+ ++ +++ + E V+
Sbjct: 232 DAKFVTTIHEVKEKEVPELDDELAKDIDEDVETLDELKEKYRKELAESKEIAFDDAVESA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
LD ++PE +V E + + + M Q + E+ + +
Sbjct: 292 ALDLAVENAEIVELPEEMVHEEVHRSVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQHE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++R T +V+ + + E ++E++++ + + +++
Sbjct: 352 ADAEKRTKTNLVIEAVAKAEGFEASDEDIEAEIASLAADYNMEVERVRQLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIVIKKAVELITSTAKVK 427
>gi|315221268|ref|ZP_07863191.1| trigger factor [Streptococcus anginosus F0211]
gi|315189627|gb|EFU23319.1| trigger factor [Streptococcus anginosus F0211]
Length = 427
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 173/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQEQIKPELDRVFNSVKKTLNVPGFRKGHLPRPVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ +T++ ++ + + + +P + +E D +
Sbjct: 61 EALYQDTLNALLPAAYEAAVKEAEIEVVAQPQFDV---------ASMEKGQDWTITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + ++D ++ N +KE ++ GD V +D+
Sbjct: 112 TKPEVKLGEYKNLEVSVDVSKEVSDADVDARIERERNNLAELVLKEDKAANGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD V + N +GS + LVG G+ E+ FPED+ DLAGK
Sbjct: 172 GTVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGHAAGETVEVNVTFPEDYQATDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +I EV ++++LA E+ ++ +++ + E V+
Sbjct: 232 DAKFVTTIHEVKEKEVPELDDELAKDIDEDVETLDELKEKYRKELAESKEIAFDDAVESA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
LD ++PE +V E + + + M Q + E+ + +
Sbjct: 292 ALDLAVENAEIVELPEEMVHEEVHRSVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQHE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++R T +V+ + + E ++E++++ + + +++
Sbjct: 352 ADAEKRTKTNLVIEAVAKAEGFEASDEDIEAEIASLAADYNMEVERVRQLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIVIKKAVELITSTAKVK 427
>gi|171915895|ref|ZP_02931365.1| trigger factor [Verrucomicrobium spinosum DSM 4136]
Length = 448
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 81/451 (17%), Positives = 173/451 (38%), Gaps = 21/451 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + IP+ + + + +A + GFRPGK P + + Y
Sbjct: 1 MNITFESQPNCRAVYRIEIPAADVQREREDVTANYARQARLPGFRPGKAPKAVVAKKYEG 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E ++++ E + D ++ + G +
Sbjct: 61 QIREELETALVRKGYQEATKRGDADILS---------VLNVRDQALHGDDHYTFTIEVST 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P+ E+ + + V EV + ++D + + + F E ES++GD + T S
Sbjct: 112 VPRFELPEYKGIPVKLPKVEVTDADVDHDLLHLRERYQTFTDVERESKLGDYAVLQVTGS 171
Query: 181 VDNVILEDQSKK----------NVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
VD +E+ N + + LVG K GD ++I PED
Sbjct: 172 VDGKPVEEAHPDAPAYLKKIDGNWFQLSEKENFLPGFYAGLVGAKKGDTRDIAVTLPEDF 231
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE-SAMRGLCSQKIKQHSEFLV 289
+ L + V + ++ V + ++ + A +L E + +R I+ +
Sbjct: 232 PYEALRNQVVTFHTTVDAVKEGVLPELDEEFAKKLNPEWDLERVRTEVKNSIEARRQQNR 291
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ Q++ ++++K F++P+ +V E + + + E+ +
Sbjct: 292 ENERTNQVIAHLADKLEFELPQEVVNREAQRRTNDIARNALNQGMDQSQIMDAQEQIVSA 351
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A++ V +LG + +K N+ V+E++++ AL Q R KK+L +K N +
Sbjct: 352 ATQQARQNVKVSFILGEVAKKENLRVSEDQLRMALAQISMRQKVSPKKLLQDAKKN-NLI 410
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
LR I + I + + + + + +
Sbjct: 411 ERLREDILIENAIGFLKEHAVVEEVEANQED 441
>gi|225028670|ref|ZP_03717862.1| hypothetical protein EUBHAL_02949 [Eubacterium hallii DSM 3353]
gi|224953980|gb|EEG35189.1| hypothetical protein EUBHAL_02949 [Eubacterium hallii DSM 3353]
Length = 439
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 81/449 (18%), Positives = 189/449 (42%), Gaps = 20/449 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + + +++ + + + N+ GFR GKVP+ I+ YG
Sbjct: 1 MSVQVEKLEHNMAKLTIEVEASKFDAAMKKAYNKKKGSFNLPGFRKGKVPMYIIEKEYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +E++ E L + RP + + + I +
Sbjct: 61 GVFYEDAANELMPEAYAAALEESGLEVVSRPEVDVTQ---------IGKGQNFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++++ + L V D EV ++E++ ++ E + N V++ + GD +T++Y
Sbjct: 112 VKPEVKLGEYKGLDVQMDSVEVADEEVEAKLKEAQEQNAREITVEDRAVQDGDIITLNYA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD V + + +N Q ++GS E L+G++ G +K++E FPE++ DLAGK
Sbjct: 172 GTVDGVAFDGGTAENQQLVIGSHTFIDNFEEQLIGVEIGGEKDVEVTFPEEYHAPDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + + +++D A F++ + +K+ E + + +
Sbjct: 232 AAVFHVEVLGIKEKQLPEIDDDFAQDTTEFDTLEEYKNDIKEKLATAKEEQAKSAAENAL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHML 353
++ I D+P+++V+ + + ++ + + +S + + +
Sbjct: 292 IEQIVESSEMDIPDAMVDFQVDQMVDEFKQRLSYQGLSLEQYVQFSGQNMDALRENMKGD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +RV +VL I NIE EE+++ + + ++ + ++
Sbjct: 352 ALKRVQGSLVLEAIVAAENIEANEEDLKKEFEKMAQMYQMEASQIEGMIPE--EQKENMK 409
Query: 414 APIFEDKVIDHILKSVQIVD--RKVTFDQ 440
I K ++ +L + + ++ F++
Sbjct: 410 KDIAVQKAVEFVLNQANVTEATEELDFEE 438
>gi|222474946|ref|YP_002563361.1| trigger factor (tig) [Anaplasma marginale str. Florida]
gi|222419082|gb|ACM49105.1| trigger factor (tig) [Anaplasma marginale str. Florida]
Length = 466
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 194/448 (43%), Gaps = 21/448 (4%)
Query: 1 MQ----VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKS 56
MQ V E S+ LKR + + + L ++R+ +I + + GFR GKV L ++
Sbjct: 26 MQRFYVVKEVLSDKLKRVYEFTVGNEYLEQQVDDRLREIAANVRMDGFRKGKVSLDLVRR 85
Query: 57 LYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL 116
G+ ++ E + +++ + + + + + + I DL L
Sbjct: 86 NCGEDVVREVLSKVVDDASSQFMQEGGFGDVVTSEVRITSHPK--VCSTEGKGGDLVYEL 143
Query: 117 SYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI---GDKV 173
++++P++ + +D+ + + EV ++++++ + E+ +F V ++ GDKV
Sbjct: 144 QFELMPEVPSVNPEDIALKEMEAEVGQEDVEKFIGELKARYPSFVVSDSPKRRAAAGDKV 203
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+DY S L S K ++G L E + + G+K GD KE + FP D+ ++
Sbjct: 204 VIDYNSSFKGKALRGGSAKGFVAVLGGGHLPKEFEDKITGMKVGDVKEFKLGFPSDYRVR 263
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
AGK+V ++ + + P V +LA GF M ++ +K F+ +
Sbjct: 264 LFAGKEVEMSVKLVSIMVPKDVGDREELAKSCGFGCAEDMVNFATESLKGRFAFMSDALM 323
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
++++ D++ Y VPES+V E I +++ ++
Sbjct: 324 RKELFDHMETIYQGQVPESVVSQESARIRRELA------------PSELEAMGEDGILKE 371
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+RRV G++L + + NNI V ++ + + + + +L + +R
Sbjct: 372 AERRVRLGMLLMKVSQDNNIAVEARDISAFVQSNYLNYGASLESVLKLLRSNQGVRDHIR 431
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ EDKV+ +++ + + V L
Sbjct: 432 GKVLEDKVVRYMVAKAKKERQNVPAGDL 459
>gi|160936368|ref|ZP_02083737.1| hypothetical protein CLOBOL_01260 [Clostridium bolteae ATCC
BAA-613]
gi|158440651|gb|EDP18389.1| hypothetical protein CLOBOL_01260 [Clostridium bolteae ATCC
BAA-613]
Length = 428
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 78/439 (17%), Positives = 183/439 (41%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + + + + D+ + ++K NI GFR GK P + I+ +YG+
Sbjct: 1 MSVQVEKLEKNMAKLTIELSAEQFEDAMKKAFNKSKNKFNIPGFRKGKAPRAMIEKMYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I E DE I E +++ RP + + + D +
Sbjct: 61 GIFYEEAADEAINATCMEAMNESGLEIVSRPEVAVEQIGKD---------KPFIYTATVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++ + + ++V + V ++++ ++ ++ + N V++ GD+ +D+
Sbjct: 112 VRPEVTLGEYKGIEVEKVDAAVKPEDVEAELKKVQEQNARLLTVEDRPVADGDQTVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + + +GS E LVG G++ EI FPE++ +LAGK
Sbjct: 172 GFVDGKTFDGGKAADYPLTIGSHSFIDTFEEQLVGKNIGEECEINVTFPEEYHAAELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KE+ ++++ A F++ + KI + + + + ++
Sbjct: 232 PATFKVTVKEIKVKELPELDDEFAGEVSEFDTLDEYKKDIEAKILERKQKEAASENENRV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+D + + ++P+ +VE + + ++Q M S + E+ +
Sbjct: 292 VDKVVAGASMEIPDRMVEGQIDNMVQDTARRMESQGLNMDLYMKYTGMTMEQMREQMKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL + + N++V++E + + + + K+ + +++
Sbjct: 352 ALKRIQTRLVLEEVVKAENLQVSDERLDEEIAKMAAAYQMEADKLKGYMSDRD--KDQMK 409
Query: 414 APIFEDKVIDHILKSVQIV 432
I + +D ++ ++V
Sbjct: 410 EDIAVQEAVDFLVAEAKLV 428
>gi|90961620|ref|YP_535536.1| trigger factor, PPIase [Lactobacillus salivarius UCC118]
gi|227890707|ref|ZP_04008512.1| trigger factor, PPIase [Lactobacillus salivarius ATCC 11741]
gi|301299282|ref|ZP_07205568.1| trigger factor [Lactobacillus salivarius ACS-116-V-Col5a]
gi|119370904|sp|Q1WU82|TIG_LACS1 RecName: Full=Trigger factor; Short=TF
gi|90820814|gb|ABD99453.1| Trigger factor, ppiase [Lactobacillus salivarius UCC118]
gi|227867645|gb|EEJ75066.1| trigger factor, PPIase [Lactobacillus salivarius ATCC 11741]
gi|300853126|gb|EFK80724.1| trigger factor [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 436
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 87/450 (19%), Positives = 185/450 (41%), Gaps = 24/450 (5%)
Query: 1 MQVIEKFSEG-LKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M + + +G + +L I ++ + N ++ N+ GFR GKVP +YG
Sbjct: 1 MSIKWEKKDGTNEGKLTFEIAPEKIKEGLNSAFNRVKKSLNVPGFRKGKVPRQIFNKMYG 60
Query: 60 KS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + E +++++ E + + D +P I + ESD L
Sbjct: 61 EEALYQEALNDLLPEAYSNAVKEADINPVDQPQIDVESMESDAA---------WVLTAKV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDY 177
+ P++E+ + DL+VT+ V + +I+ ++ + + ++ +E GD V +D+
Sbjct: 112 TVEPEVELGQYKDLEVTKHPTRVLKADIENELNRLQQQEAELVLKEDEPAEQGDTVVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D + +N +GS + LVG K G++ + FPED+ KDLAG
Sbjct: 172 EGKIDGEAFDGGKGENHSLELGSGQFIPGFEDQLVGHKAGEEVAVTVTFPEDYQAKDLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K+ + I EV + ++++ A + ++ ++K + ++
Sbjct: 232 KEAVFDTKIHEVKTKELPELDDEFAKDVDEDVATLEELKAKIKDRLKDQKVAEAKAAIQE 291
Query: 296 QILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYY 350
+ LD T ++P ++E++ + + M + Q + ++ + +
Sbjct: 292 EALDIAVENATIGEIPAVMIEDDVHRQMDNFLAGMQNQGISADMYYQLTGTSADDLHKQF 351
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A++RV T +VL I + IE +E+E+ + + ++ E +
Sbjct: 352 EEGAEKRVKTNLVLEAIVKAEKIEPSEDEINAEIKSLAEQYQMDEAAVRSALSDD----- 406
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
L+ I KV+D I S + ++
Sbjct: 407 MLKHDIAVRKVVDEIADSAKQTRDAKKDEE 436
>gi|86607584|ref|YP_476346.1| trigger factor [Synechococcus sp. JA-2-3B'a(2-13)]
gi|119371021|sp|Q2JQ33|TIG_SYNJB RecName: Full=Trigger factor; Short=TF
gi|86556126|gb|ABD01083.1| trigger factor [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 556
Score = 183 bits (463), Expect = 6e-44, Method: Composition-based stats.
Identities = 80/485 (16%), Positives = 183/485 (37%), Gaps = 22/485 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV ++ G + L +++ ++R+ S+ + + + I GFR GK P + + G+
Sbjct: 1 MQVTQEKRPGSRVGLKIVVEADRVKRSYEKTLRQLEQNIQIPGFRKGKAPRNLVVRQVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL+ +D++I E + + + R + G+ D +
Sbjct: 61 ERILASAVDDLINEAIQQAFKEAQLTPISRFELDDEVGQ---LLAQFNPEADFSFSGYVE 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ + + L VT +V ++ID+ + E V V
Sbjct: 118 VYPEARVGQYKGLTVTATRVDVKPEQIDQLIDRWRDQRATLLPVEDRPAQLGDVVVIDFA 177
Query: 180 --SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ L++ + ++ Q + + +VG++ + KEI FP+D+ K+LAG
Sbjct: 178 ARDAEGNPLDEMTTQDFQLELKEDNFIPGFVAGIVGMQLDETKEIAATFPDDYFRKELAG 237
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K V ++E+ + +++ F++ + +R ++++Q + + ++
Sbjct: 238 KTVTFIVCLREIKAKELPELDDAFVQEISSFQTVAELREHLQKRLEQDALRQSEENLETA 297
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI--------DEEDLQ 348
IL+ I D+PE+L+E E +L + + K + + +
Sbjct: 298 ILNAILETTEVDLPETLIEQETTQLLAQSLQALRQEGIKPGELRKFLSELPPETLNQLKE 357
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ A R+ + L I + I V E+ + + + + +K+
Sbjct: 358 RHRPEAIDRLRRTLALSAIVRQEQIAVGSTELDVEVEEVMAAYAQQGQKL-----DRERV 412
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEA 468
+ + +KV+ + + V + + S F+++E
Sbjct: 413 RQAVYESLLTNKVMAWLKSQTTVN--WVDSEGNPTQAPTSLAGSEEKVEVPEAEFEADEP 470
Query: 469 PSEIS 473
+E+S
Sbjct: 471 EAEVS 475
>gi|116621144|ref|YP_823300.1| trigger factor [Candidatus Solibacter usitatus Ellin6076]
gi|122254886|sp|Q026Q4|TIG_SOLUE RecName: Full=Trigger factor; Short=TF
gi|116224306|gb|ABJ83015.1| trigger factor [Candidatus Solibacter usitatus Ellin6076]
Length = 422
Score = 183 bits (463), Expect = 7e-44, Method: Composition-based stats.
Identities = 83/427 (19%), Positives = 186/427 (43%), Gaps = 11/427 (2%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSET 66
EG K L++ IP+ + N + D++ +A + GFRPGK P S I+ + I +
Sbjct: 3 LVEGCKHSLEISIPAAEVETETNRVVLDVQKRAKLPGFRPGKSPASIIRKQFAGDIRQQV 62
Query: 67 IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEI 126
++ +I + + L + P DI+ L+ + +++++P+IE+
Sbjct: 63 LESLIPTHLQKQLEAENLNVVGTP---------DISDVHFHDNEPLRFKATFEVVPEIEL 113
Query: 127 SSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVIL 186
+ +++V EV ++++ ++ EI + + + V S++ V
Sbjct: 114 GEYTNIEVPYQDPEVTDEDVTSRIDEIREQKAQYVNIDPRPLADGDFAVVSLESLEGVSG 173
Query: 187 EDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSI 246
+ +Q +G+ + F E L GL GD+K+ E +P D+ + LAG+KV+ + +
Sbjct: 174 DPVKTDEMQLEIGAKETFEAFNENLRGLSPGDEKDFEVEYPADYGSEKLAGRKVKFHAVV 233
Query: 247 KEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
K + ++++ A + + ++ + I ++ +Q+ K +I+D + + +
Sbjct: 234 KGLRKKELPELDDEFAQELGDYRTVDELKEAVRKAIFSQRQYEAQQEAKNKIVDKLVDAH 293
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLG 365
F VPE VE + +++ M+ + E+ + A R V ++LG
Sbjct: 294 EFPVPEVFVERQIRNRVEQSLRAMAEQGVDPSKLKLDWEKVKEAQREKATREVKASLLLG 353
Query: 366 TIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHI 425
+ ++ I T +E+ + + + + + F+K L + + I DK + +
Sbjct: 354 KVSDREAIRATRDEVDAEVEKAARQQRKPVAAVHMEFEKD-GTLGRIASHIQTDKTLSFL 412
Query: 426 LKSVQIV 432
+ +
Sbjct: 413 FERARKT 419
>gi|220928258|ref|YP_002505167.1| trigger factor [Clostridium cellulolyticum H10]
gi|254788995|sp|B8I8F4|TIG_CLOCE RecName: Full=Trigger factor; Short=TF
gi|219998586|gb|ACL75187.1| trigger factor [Clostridium cellulolyticum H10]
Length = 428
Score = 183 bits (463), Expect = 7e-44, Method: Composition-based stats.
Identities = 69/439 (15%), Positives = 180/439 (41%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E +L++ + + + + + K N+ GFR GK P + I+ YG+
Sbjct: 1 MKVKVENVEKNVVQLEIEVDTAKFEEGMQQSYLKNVKKFNVPGFRKGKAPRNIIERYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + I+ + E + + + RP I I + I +L
Sbjct: 61 QALYDDAINIVCSEAYDNAIEENNINPVDRPEIDIVQ---------IGKNQNLIFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++E+ ++ ++ + V +++++ + ++ + N + + GD +D+
Sbjct: 112 VKPEVELGAYMGVEAKKAEANVTDEDLENEFNKVVEKNARLVSVTDRPIQSGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D+V E ++ ++GS + L+G D ++ FPE++ ++L GK
Sbjct: 172 GFIDSVPFEGGKGEDYSLVIGSGTFIPGFEDQLIGKNIADDVDVNVSFPEEYGKEELNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ IKE+ V+++ A F++ + K+++ ++ + + +
Sbjct: 232 EALFKVLIKEIKVKELPTVDDEFAKDISEFDTLEEYKNDLRNKLEESAKSKAERDNEESV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+ + T D+P +VE + + + + + + + + E + +
Sbjct: 292 IQAVVGNATVDIPNVMVEKHIDAMARDFDMRLRYQGLDLQRYLEIMGTDFEGFREQFRER 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A V +V+ I + N+E T+ +++ + + + +++ + P L ++
Sbjct: 352 AANEVKIQLVIEKISKVENVEATDADVEEEITKTAEAYKQPVEELKKTLR--PEDLEYVK 409
Query: 414 APIFEDKVIDHILKSVQIV 432
I K I ++ + ++
Sbjct: 410 NDIAFRKTIKILVDNAKLN 428
>gi|15615615|ref|NP_243919.1| trigger factor [Bacillus halodurans C-125]
gi|12230729|sp|Q9K8F3|TIG_BACHD RecName: Full=Trigger factor; Short=TF
gi|10175675|dbj|BAB06772.1| trigger factor (prolyl isomerase) [Bacillus halodurans C-125]
Length = 431
Score = 183 bits (463), Expect = 7e-44, Method: Composition-based stats.
Identities = 79/438 (18%), Positives = 187/438 (42%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V + S ++ ++ ++ + + K N+ GFR GKVP + +G
Sbjct: 1 MTAKWEKLEGNEGVLTVDVESAKVDEALDKAFKKVVKKVNVPGFRKGKVPRKIFERQFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E + + RP I I + E +L + +
Sbjct: 61 EALYQDALDILLPEAYAAAIDETGIEPVDRPEIDIEQM---------EQGNNLIFKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L+ + V ++++++++ + + V+E + GD +D+
Sbjct: 112 VKPEVQLGDYKGLEFEEKDTTVSDEDVEQELKSLQERQAELVVVEEEAIQEGDTAVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS + LVGLK G++K++E FPE++ ++LAGK
Sbjct: 172 GFVDGEAFEGGKAENYSLEIGSGQFIPGFEDQLVGLKAGEEKDVEVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I +V ++++ A ES ++ +K+++ + +
Sbjct: 232 PATFKVKIHDVKRKELPELDDEFAKDVDEEVESLDELKKKLREKLEKDRAHEADHEKRDT 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ S T D+PE+++ E + + Q+ + + E+ +
Sbjct: 292 LIQKASENATIDIPEAMINTELDRMTQEFEQRLQMQGMNLEMYFQFSGQTQEQLREQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I + N+E ++E+++ L + + + + +
Sbjct: 352 DAEKRVRVNLTLEAIANQENLEASDEDVEKELEKMAEMYQRSVDE-IKSIFATQGGTDGI 410
Query: 413 RAPIFEDKVIDHILKSVQ 430
+A + K +D +++ +
Sbjct: 411 KADLKIQKAVDFLVEHSK 428
>gi|323359778|ref|YP_004226174.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Microbacterium
testaceum StLB037]
gi|323276149|dbj|BAJ76294.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Microbacterium
testaceum StLB037]
Length = 511
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 88/444 (19%), Positives = 177/444 (39%), Gaps = 27/444 (6%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+ + +L + + + L S E I I GFR GKVP I G+
Sbjct: 3 NSTVEKLSPTRVKLHITVSPDELKPSIAHAYEHIARDVQIPGFRKGKVPAPIIDQRMGRG 62
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ ++E + E + ++ R RP+ I E L + + DL + + D+
Sbjct: 63 AVIEHAVNEGLDGFYREAVEAQELRVIGRPNAEIIE-----LPDLKDFSGDLVVDVEVDV 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ ++D + VT D E DE ID ++ + + + GD V +D +
Sbjct: 118 RPEFDLPAYDSITVTVDAVEADEAGIDAELDRLRARFGTLVTVDRPAAKGDFVELDLVAT 177
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D ++ + V + VGS +L E + L ++ F D AG++
Sbjct: 178 IDGAEID--RAEGVSYEVGSGELLEGIDEAIDSLTADEE----TTFRSKLVGGDHAGEEA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ I V ++D A + F++ +R S+++ Q + F + + +D
Sbjct: 232 EVSVKITAVKERELPEADDDFAQMASEFDTIGELRESLSERVSQQAVFTQGSAARDKFID 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ VP L+E+E + L+ D+ ++++
Sbjct: 292 ALLEAVEIPVPPQLIEDEVHQHLEGENR-------------LEDDVHRAEVTEASEKQFR 338
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T +VL I E +++V+++E+ L Q ++ + ++ Q+ N L L + +
Sbjct: 339 TQMVLDKIAEDADVQVSQDELTQYLIQSAAQYNMAPQDFVNALQQ-GNQLPALVGEVARN 397
Query: 420 KVIDHILKSVQIVDRKVTFDQLFD 443
K + L V +VD L
Sbjct: 398 KALAIALGKVTVVDTNGKPVDLTG 421
>gi|225573065|ref|ZP_03781820.1| hypothetical protein RUMHYD_01256 [Blautia hydrogenotrophica DSM
10507]
gi|225039571|gb|EEG49817.1| hypothetical protein RUMHYD_01256 [Blautia hydrogenotrophica DSM
10507]
Length = 444
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 78/437 (17%), Positives = 183/437 (41%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + L + ++K + GFR GK P I+ +YG
Sbjct: 17 MSLQVEKMEKNMAKLTIEVSAEELEKAIQGAYLKNKNKITLPGFRKGKAPRKMIEKMYGT 76
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ L + + +I + L + D +P I + + +E
Sbjct: 77 GVFLEDAANALIPTAYSDALQECDLEIVSQPEIDVTQ---------LEAGKPFIFTAEVA 127
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNN-VAFEVKETESEIGDKVTVDYT 178
+ P++ + + +++ + EV E+EI+ ++ + +NN V++ E GD T+D+
Sbjct: 128 VKPEVTLGEYKGVEIKKIEVEVTEEEIEAELKKEQENNSRTIVVEDRAVESGDIATIDFE 187
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +GS + L+G TGD+ ++ FPE++ KDLAGK
Sbjct: 188 GFVDGTPFEGGKGTDYPLTIGSNTFIPGFEDQLIGANTGDKLDVNVTFPEEYQAKDLAGK 247
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
IK++ ++++ A F++ + + + + E +++ + +
Sbjct: 248 AAVFKCEIKKIEKKELPELDDEFAKDVSEFDTLDEYKADIKKNLTEKKEADAKRQKEDEA 307
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+D + ++PE++++ + N ++ M + + ++ ++
Sbjct: 308 VDKAVENASMEIPEAMIKTQVNQMVDDFSRRMQAQGLSMEQYFQFTGMTIDKLMEEMKPQ 367
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I E NI+ +EE ++ + + + + K+ + L +++
Sbjct: 368 ALKRIQTRLVLEKIAEVENIQPSEERVEEEIGKMAEMYKMEKDKLRELIGDIE--LEQMK 425
Query: 414 APIFEDKVIDHILKSVQ 430
+ + +I + +
Sbjct: 426 KDMAVQDAVTYIADAAK 442
>gi|291087563|ref|ZP_06346799.2| trigger factor [Clostridium sp. M62/1]
gi|291074651|gb|EFE12015.1| trigger factor [Clostridium sp. M62/1]
Length = 442
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 83/439 (18%), Positives = 182/439 (41%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + + +++ NI GFR GK P + I+ +YG
Sbjct: 15 MSLQVEKLEKNMAKLTIEVSAEEFEKAMKAAYNHNKTRFNIPGFRRGKAPQAMIEKMYGA 74
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + +I P L +E P I + + IE +
Sbjct: 75 GIFYEDAANAVIDMSYPRELEACEEEIVSSPEIEVVQ---------IEKGKPFIYTATVA 125
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++ + + ++V + V ++++++++ + N + GD+ +D+
Sbjct: 126 LKPEVTLGEYKGVEVEKTDATVTDEDVEKELKSVQDRNSRLVAVTDRPVADGDQTVIDFK 185
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD K+ +GS E +VG+ G+ KEIE FP ++ KDLAGK
Sbjct: 186 GYVDGKAFAGGEGKDYPLTIGSHSFIDTFEEQMVGMNIGETKEIEVTFPTEYHAKDLAGK 245
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++KE+ +N++ A FE+ + + + + + E + + ++
Sbjct: 246 PAKFEVTVKEIKVKELPELNDEFASEVSDFETLAEYKENLKKTLTERKEKTAEAENENKV 305
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHML 353
+D +++ D+PE++++ + + S NQ Q E +
Sbjct: 306 IDKVTDNAQMDIPEAMIKTRLRSMFDDYARRLQSQGLDINQYMQFTGMTRENIMDQMKPQ 365
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R++ TG+VL + E IEV EE++ + + + + K+ + L +++
Sbjct: 366 AVRQIRTGLVLEKVAEAEKIEVPEEDIDAEIAKMAEAYKMEADKLKGLLGERE--LEQMK 423
Query: 414 APIFEDKVIDHILKSVQIV 432
+ K ++ ++ ++V
Sbjct: 424 KDLAVKKAVELLVAEAKLV 442
>gi|291550774|emb|CBL27036.1| trigger factor [Ruminococcus torques L2-14]
Length = 429
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 87/435 (20%), Positives = 181/435 (41%), Gaps = 19/435 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + + + RSK ++ GFR GKVP I+ +YG
Sbjct: 1 MSLQVEKLEHNMAKLTIEVSAEEVEKALQAAYLKERSKISLPGFRKGKVPRQMIEKMYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E + +I E + + + A +P+I I + +E
Sbjct: 61 EVFYDEAANRMISEAYAKAYDESELEIASQPTIDIVQ---------LEKGKPFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L+V + V +KE+D ++ ++ + + EV + D VT+D+
Sbjct: 112 VKPEVKLGEYKGLKVDKYSTRVTQKEVDEEIEKVREQHARIVEVTDRAVADKDDVTLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N +GS E L+G + + E++ FPED+ +DL GK
Sbjct: 172 GFVDGVAFEGGKGENYPLTIGSGSFIPGFEEQLIGAELEKEVEVKVTFPEDYHSEDLKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLA--VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ + + V+++ A V E+ A R +IK+ E + K + Q
Sbjct: 232 EAVFKCTVHAIRAKELPEVDDEFASDVSEKAETLDAYRAEVKAQIKERKENEGKAKKEDQ 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ D+PE +V+ + + + + +E+ ++
Sbjct: 292 AVEQAVANAEIDLPEPMVDLQAKQMADDFARRIMQQGLSVEQYFQFTGLSEEKMMEELKP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++R+ T +VL I NIEV++E + L + + +K+ + + ++
Sbjct: 352 QAEKRIRTRLVLEAIVAAENIEVSDERLDEELAKMAESYKMEVEKLKEFMGENE--KKQM 409
Query: 413 RAPIFEDKVIDHILK 427
+ I + I+
Sbjct: 410 KEDIAVQDAVTLIVD 424
>gi|255505867|ref|ZP_05348575.3| trigger factor [Bryantella formatexigens DSM 14469]
gi|255265473|gb|EET58678.1| trigger factor [Bryantella formatexigens DSM 14469]
Length = 437
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 77/436 (17%), Positives = 171/436 (39%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + + + N+ GFR GK P I+ +YG
Sbjct: 10 MSLKVENLEHNMVKLTIEASAEEFEKAMQSAYLKNKGRINMPGFRKGKAPRQLIEKMYGA 69
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + +E+I +++ D RP I I + IE
Sbjct: 70 GIFYEDAANEVIPAAYDREVAECDLELVSRPKIEITQ---------IEEGKPFIFTAEVA 120
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++ + + L+V + V ++EI ++ + + N + GD + +D+
Sbjct: 121 VKPEVTLGEYKGLEVPKSDTAVSDEEIQAEVDKEREKNSRMIDVDDRAVADGDSIKLDFD 180
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E +N +GS E LVG + G + ++ FPED+ K+LAGK
Sbjct: 181 GSVDGVPFEGGKAENYDLTIGSGSFIPGFEEQLVGAELGKELDVNVTFPEDYHAKELAGK 240
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ E+ ++D A F++ + + +K+ + E + +
Sbjct: 241 AAVFKCKVNEIKVKELPEADDDFAQDVSEFDTLAEYQEDIRKKLTEKKETEAKNAKETAA 300
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
L+ D+PE++++N+ + + S + ++ L+
Sbjct: 301 LEKAVENAQMDIPEAMIDNQVRQMADDFARRIQSQGISLEQYLQFTGMTADKLLEQMRPE 360
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++R+ +VL I + IE +++++ + + + + + + + + ++R
Sbjct: 361 AEKRIKNTLVLEAIAKAEGIEAGDDKVEEEIKKMAEMYKMEAENVKNMLGE--QGVEQIR 418
Query: 414 APIFEDKVIDHILKSV 429
+ + ++ + S
Sbjct: 419 HDLAIQEAVNLLRDSA 434
>gi|221633186|ref|YP_002522411.1| trigger factor [Thermomicrobium roseum DSM 5159]
gi|254789029|sp|B9L1E4|TIG_THERP RecName: Full=Trigger factor; Short=TF
gi|221156074|gb|ACM05201.1| trigger factor [Thermomicrobium roseum DSM 5159]
Length = 490
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 178/438 (40%), Gaps = 22/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + LD+ + I + + GFRPG+ P + ++ G+
Sbjct: 1 MKITVEHLPQSTVRLDIAADPEEFDAALERAFRRISQQVQVPGFRPGRAPRALVERRVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I++E E++ + E L + P + I + L R+
Sbjct: 61 ELIVAEAQRELMDRLYREALQQHRLTPVAEPEVEIYQ------------DEPLAFRVEVQ 108
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ PQ+++ + D++V EV E+EID+ + + ++ ++ + + D V +
Sbjct: 109 VYPQVDLDGYRDIRVEPREVEVTEEEIDQVIEGLRRSRAVWKTPDEPRQPRDGDQVIVDI 168
Query: 180 S-VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI--KDLA 236
+ + + F++G ++LF+E + + L+ G+ E + F E+ +L
Sbjct: 169 EAYEGEQPFQEPLRQATFVLGESNLFAEIDQAIRSLRPGESAEFDISFAEEDERVSPELR 228
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
GK + ++ EV VN++ A LG + S +R + + + R +V Q
Sbjct: 229 GKTLHYRVTVHEVKEAELPEVNDEFAQSLGVATLSELRDRVRRDLLREKAQAARAEVLEQ 288
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHM 352
+ + T ++P +L+E + ++++R ++ + EE +
Sbjct: 289 AVQRLLEVATVELPPALIERQVAADVERLREQLRQRGSSLEEYLRFQGKTLEEFKEELRP 348
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ R+ +VL E I V+EEE+ + + + ++ + P+ + L
Sbjct: 349 QAEARLRRYLVLEAFAEAEGIAVSEEELVAEIERLALASG-SPEQFRAFY-SVPSVRSYL 406
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ E KV + +L+ V
Sbjct: 407 ADELHERKVSERLLELVT 424
>gi|33864601|ref|NP_896160.1| trigger factor [Synechococcus sp. WH 8102]
gi|41018175|sp|Q7UA35|TIG_SYNPX RecName: Full=Trigger factor; Short=TF
gi|33632124|emb|CAE06580.1| Possible FKBP-type peptidyl-prolyl cis-trans isomerase
[Synechococcus sp. WH 8102]
Length = 472
Score = 182 bits (462), Expect = 8e-44, Method: Composition-based stats.
Identities = 68/441 (15%), Positives = 179/441 (40%), Gaps = 18/441 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V + G + + V +P+ R S+ + I + N+ GFR GKVP + + G
Sbjct: 7 KVTTESRPGSRLAVTVTVPAERTKTSYEDAINSLSRSINLPGFRKGKVPRTVVIQQLGAV 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++ ++ + + + +P + G + + + L D+
Sbjct: 67 RIKASALETMVDGAWRDAIQQESLEPISQPEL---SGGFEGLLDSFTPGEAVTITLEADV 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVDY 177
P ++ S L+ + + D ++D + + K E + +
Sbjct: 124 APTPKLKSTKGLKASFEPVAYDAAKVDEMLEDSRKQLATVVPVEGRAAEQGDIAVLGFKG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T S D +E S ++ + + E ++G+ GD K ++ FP+D+ +D G
Sbjct: 184 TYSDDGSEIEGGSADSMDVDLEHGRMIPGFIEGVIGMAVGDSKTVDCQFPDDYPKEDARG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K +K++ + +N+ A + E+ + +R Q++K +E +
Sbjct: 244 RKAAFEIELKDLKTRELPELNDAFAKQASEQETLAELRQELEQRLKDDAERRQTSNRRDA 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
++ + + ++PE+L++ E +L++ + + +++ + D +Q A
Sbjct: 304 LIGALVEQLEVELPEALIQQESRNLLEQTAAQFAQQGMDVKSLFTPDLVRNLMQNSRPEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE-LR 413
+ R+ L + E I V ++ + + + + +K++ + P L + +
Sbjct: 364 EERLRRSFALTALAEAEGISVEDDAVDAKIKEV-------KKELAADAKIDPQRLRQAVM 416
Query: 414 APIFEDKVIDHILKSVQIVDR 434
+ +++++ + ++ + ++
Sbjct: 417 DDLIQEQLMSWLEENSTLTEQ 437
>gi|317153553|ref|YP_004121601.1| trigger factor [Desulfovibrio aespoeensis Aspo-2]
gi|316943804|gb|ADU62855.1| trigger factor [Desulfovibrio aespoeensis Aspo-2]
Length = 474
Score = 182 bits (462), Expect = 9e-44, Method: Composition-based stats.
Identities = 91/436 (20%), Positives = 195/436 (44%), Gaps = 13/436 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +KR++ V +P+ + + I R +A++KGFR GKVP S ++S Y K
Sbjct: 1 MEYNVEEISPVKRKIMVQVPAEEVNAALTATIAMYRMQADVKGFRKGKVPSSVVESKYRK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E ++I + EI+S + R D+ + + D +++++
Sbjct: 61 QVYGEATTDLINYQINEIMSGLSLQPMSR---------IDVDAKELVREEDFTYSITFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
P++++ + L V + VD+ E+ I +NN + + G+ +V +
Sbjct: 112 APKLDLPKYKGLSVEEVKAVVDDAEVAEVEKRILENNAEVKVIEDVRPPKDGEVASVSFG 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D I+E +N ++G E E+L + TG+ E + FPED ++LAG+
Sbjct: 172 AYRDGEIVEGIKAENFDLVMGQKQALPEFEELLKTMTTGESGETDITFPEDFINQNLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V + + V + +++ +A++ GF+ MR + + + + + Q+L
Sbjct: 232 TVTMKVKLHAVKERITPEMSDSVAMKAGFKDVETMRAGIRESYASQRKQMHKSAAQSQLL 291
Query: 299 DYISN-KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
I F +P ++VE+ + ++Q + + + + Q + ++ + A+
Sbjct: 292 STIIEGIAEFPLPPAMVEDRIDRLVQDLEYRLDRQGKGLQILGKTPQQIRDEFKAEAENT 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V T I L + + +E+T EE++S L Q + ++ +++ N + L+ +
Sbjct: 352 VKTEIFLLAVAAEEGLEITPEEIESTLTQLAMQTRQPLHELKKYYEDN-NLVVPLKDRLL 410
Query: 418 EDKVIDHILKSVQIVD 433
DK + I + +I +
Sbjct: 411 CDKASELIYDAAEIKE 426
>gi|225568850|ref|ZP_03777875.1| hypothetical protein CLOHYLEM_04929 [Clostridium hylemonae DSM
15053]
gi|225162349|gb|EEG74968.1| hypothetical protein CLOHYLEM_04929 [Clostridium hylemonae DSM
15053]
Length = 428
Score = 182 bits (462), Expect = 9e-44, Method: Composition-based stats.
Identities = 83/436 (19%), Positives = 182/436 (41%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + +P++ L + R K N+ GFR GKVP I+ +YG
Sbjct: 1 MSLQVEKLEKNMAKLTIEVPADDLEKALQSAYMKQRKKINMPGFRKGKVPRQMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + +E+I + + + + +P I + + IE
Sbjct: 61 EIFYDDAANELIPKAYSDAYEECELNIVSQPDINVVQ---------IEKGKPFVFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
P++ + + L+V + V +KE+D ++ E A+ N ++ + GD+V +D+
Sbjct: 112 TKPEVTLGEYKGLEVDKVSTRVTQKEVDARIQEEAEKNARTVAVEDRPVQNGDEVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E LVG + G + E+ FPED+ ++L GK
Sbjct: 172 GFVDGAAFEGGKGENYPLTIGSNSFIPGFEEQLVGAEAGKEVEVNVTFPEDYHAEELKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ E+ + ++++ A F++ + KIK + K + Q+
Sbjct: 232 EAVFKCTVHEIKAKELPEIDDEFAAEVSEFDTLEEYKADVKVKIKDEKAAEGKTKKEDQV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
++ ++P++++E + + + S + E+ L+
Sbjct: 292 VEQAVKNAEMEIPKAMIETQVRQMADDFAQRIQSQGISLEQYFQFTGMTAEKMLEEMRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I + NIE+++E++ L + + K+ + + +++
Sbjct: 352 AIKRIETRLVLEAIAKAENIEISDEKVDEELAKMAESYKMEVDKLKEFMGENE--KNQMK 409
Query: 414 APIFEDKVIDHILKSV 429
+ + + ++++
Sbjct: 410 EDMAVQEAVTFLVENA 425
>gi|283852377|ref|ZP_06369647.1| trigger factor [Desulfovibrio sp. FW1012B]
gi|283572225|gb|EFC20215.1| trigger factor [Desulfovibrio sp. FW1012B]
Length = 443
Score = 182 bits (462), Expect = 9e-44, Method: Composition-based stats.
Identities = 88/438 (20%), Positives = 174/438 (39%), Gaps = 13/438 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ +K +++V +P+ + + RSK +IKGFR GKVP S I+S + K
Sbjct: 1 MEYTVTQISPVKTQVNVSVPAEEANAALASAVALYRSKVDIKGFRKGKVPSSVIESRFKK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I+ E ++I + EI+ D++ + L +++
Sbjct: 61 EIVGEATTDLINVHINEIMGDLKLSPLS---------GLDVSDAALSKDTPLDYTFTFEH 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTVDYT 178
P ++ + + ++ V + EID + + KN + GD V+V +
Sbjct: 112 APAFDLPEYKGQAIEEEDVLVSDAEIDAVIERVRKNLAEVTPISGDRMPADGDVVSVTFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + +N + +G E ++ + G + E E FP D DLAG+
Sbjct: 172 AFENGQAVPGVRAENFELTLGEGQALPEFEALVKTVAAGSEGEAEMTFPADFINADLAGR 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + ++ V V+++LA + FE+ MR + K+ L R ++++
Sbjct: 232 TVNMKVAVHVVKERKLPAVDDELAKKAGNFENLDKMREAITMSYKKSRADLHRSSAQKKL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + + F +PE++VE + + + ++ + + + A+
Sbjct: 292 LDKLLAQVDFPLPETVVEQQVAQMADEFVNQLERRGKNLEGSGKTMADLEAEMTPKAQEM 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V T I L + K + VT +EM + Y+ + ML + + + +R +
Sbjct: 352 VKTQIFLSAVAAKEELTVTPQEMDAFFYRLSTQVGQDV-IMLKRYYEDNGLMIMVRDKLL 410
Query: 418 EDKVIDHILKSVQIVDRK 435
DK D I + +
Sbjct: 411 ADKAADFIYANAMVTKVA 428
>gi|148543884|ref|YP_001271254.1| trigger factor [Lactobacillus reuteri DSM 20016]
gi|184153284|ref|YP_001841625.1| trigger factor [Lactobacillus reuteri JCM 1112]
gi|194468439|ref|ZP_03074425.1| trigger factor [Lactobacillus reuteri 100-23]
gi|227364792|ref|ZP_03848840.1| cell division trigger factor [Lactobacillus reuteri MM2-3]
gi|227544996|ref|ZP_03975045.1| cell division trigger factor [Lactobacillus reuteri CF48-3A]
gi|300909969|ref|ZP_07127429.1| trigger factor [Lactobacillus reuteri SD2112]
gi|325682583|ref|ZP_08162100.1| trigger factor [Lactobacillus reuteri MM4-1A]
gi|166988052|sp|A5VJ93|TIG_LACRD RecName: Full=Trigger factor; Short=TF
gi|229558049|sp|B2G6R3|TIG_LACRJ RecName: Full=Trigger factor; Short=TF
gi|148530918|gb|ABQ82917.1| trigger factor [Lactobacillus reuteri DSM 20016]
gi|183224628|dbj|BAG25145.1| trigger factor [Lactobacillus reuteri JCM 1112]
gi|194453292|gb|EDX42190.1| trigger factor [Lactobacillus reuteri 100-23]
gi|227070136|gb|EEI08511.1| cell division trigger factor [Lactobacillus reuteri MM2-3]
gi|227185013|gb|EEI65084.1| cell division trigger factor [Lactobacillus reuteri CF48-3A]
gi|300892617|gb|EFK85977.1| trigger factor [Lactobacillus reuteri SD2112]
gi|324978422|gb|EGC15372.1| trigger factor [Lactobacillus reuteri MM4-1A]
Length = 436
Score = 182 bits (462), Expect = 9e-44, Method: Composition-based stats.
Identities = 81/448 (18%), Positives = 182/448 (40%), Gaps = 25/448 (5%)
Query: 1 MQVIEK-FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M + S+ K L I + + +E + R K + GFR G+VP +YG
Sbjct: 1 MSAKWERDSDASKGTLTFEIDVDTINKGIDEAFVETRKKITVPGFRKGRVPRQIFNQMYG 60
Query: 60 KS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + + +++++ + E + + + + +P I I E L
Sbjct: 61 EESLYQDALNKVLPDAYNEAVKETNIQPVDQPKIDIKSM---------EKGQPWVLTAEV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDY 177
D++P++++ + ++V V + ++D + + +KE + D V +DY
Sbjct: 112 DVMPEVKLGEYKGMEVPAQDTTVTDADVDDALETKRQQQAELVLKEDKPAEKGDTVVIDY 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
SVD + S +N +GS + L+G + ++ FPED+ K+LAG
Sbjct: 172 KGSVDGEEFDGGSAENYSLELGSGSFIPGFEDQLIGHNADEDVDVNVTFPEDYHAKNLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K I E+ +++D A ++ + ++ +++++ + + ++
Sbjct: 232 KDALFKVKIHEIKEKQLPELDDDFAKDVDEDVDTLAELKEKTKKQLQEEKDNQAKAAIED 291
Query: 296 QILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYY 350
++ D+P+++++++ N +Q+ M Q +E+ + +
Sbjct: 292 AAINKAVANAEIQDIPQAMLDDDTNRQMQQYLAGMQQQGISPQMYFQITGTKEEDLKKQF 351
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A +RV T +VL I + N++ T+EE+ + ++ E + K
Sbjct: 352 ANDAAQRVKTNLVLEAIVDDANLDATDEEIAKEISDLAKQYGMEEDAVKKALSKD----- 406
Query: 411 ELRAPIFEDKVIDHILKSVQ-IVDRKVT 437
L I K +D + S + + D + +
Sbjct: 407 MLMHDIKIRKAVDLVADSAKQVKDDEKS 434
>gi|153217618|ref|ZP_01951299.1| trigger factor [Vibrio cholerae 1587]
gi|124113434|gb|EAY32254.1| trigger factor [Vibrio cholerae 1587]
Length = 262
Score = 182 bits (461), Expect = 9e-44, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 126/267 (47%), Gaps = 9/267 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLENIAVEKPAAEVTDADVADMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E +N +G+ + + +VG G + I+ FP+D+ ++L GK
Sbjct: 172 IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPDDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGF 267
+ + +V + +N++ R G
Sbjct: 232 KFAIKVNKVEARELPELNDEFVARFGV 258
>gi|260589158|ref|ZP_05855071.1| trigger factor [Blautia hansenii DSM 20583]
gi|260540578|gb|EEX21147.1| trigger factor [Blautia hansenii DSM 20583]
Length = 447
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 89/447 (19%), Positives = 187/447 (41%), Gaps = 18/447 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + + + + R K I GFR GK P I+ +YG
Sbjct: 12 MSVQVENLEKNMAKLTIEVSAEEFEKAVQNAYLRSRGKITIPGFRKGKAPRVMIEKMYGA 71
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + +I+ P+ + +P I + + IE
Sbjct: 72 GIFFEDAANALIQAEYPKAADESGLEIVSQPEIDVVQ---------IEKGKSFIFTAEVA 122
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++ + + L+V +V E+EI ++ +NN + GD VT+D+
Sbjct: 123 VKPEVTLGEYKGLEVEVSPADVTEEEIAAELKREQENNSRTIDVDDRAVADGDMVTLDFE 182
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E + +GS E LVG + G +KE+ FPE++ DLAGK
Sbjct: 183 GFVDGVAFEGGKGTDYPLTIGSNSFIPGFEEQLVGAEIGVEKEVNVTFPENYHANDLAGK 242
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A F++ A + +K+K+ E + +++ + +
Sbjct: 243 AAVFKCTVKAIKVKELPELDDEFAKDVSEFDTLDAYKADIEKKLKERKEAVAKREREDKA 302
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+D + D+PE++++N+ ++Q M + Q Q + + +
Sbjct: 303 VDAVIENAQMDIPEAMIQNQIQQLMQDFIRRMQAQGLSIDQYYQFTGLDNAKIQEQMRPQ 362
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ + +VL I E NI++++E+ + L + +K+ + Y +++
Sbjct: 363 ALKRIQSRLVLEKIAETENIQISDEKFEEELKAMADMYKMEVEKLKEVMGDYE--KEQIK 420
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQ 440
+ + + + +S ++V++K +
Sbjct: 421 KDMAVQEAVTLVAESAKVVEKKEEKAE 447
>gi|153813467|ref|ZP_01966135.1| hypothetical protein RUMOBE_03887 [Ruminococcus obeum ATCC 29174]
gi|149830411|gb|EDM85503.1| hypothetical protein RUMOBE_03887 [Ruminococcus obeum ATCC 29174]
Length = 428
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 178/437 (40%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + L + + + + + GFR GK P I+ +YGK
Sbjct: 1 MSLQVEKLEKNMAKLTIEVSAEDLEKAMQAAYQKAKGRITLPGFRKGKAPRKMIEQMYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I L + + +I E + L + D +P I + + E
Sbjct: 61 GIFLEDAANALIPEHYSKALEECDLEIVSQPEIDVTQA---------EPGKAFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++ + + ++V + EV +++++ ++ + + N ++ +E GD T+D+
Sbjct: 112 VKPEVTLGEYKGVEVPKSETEVTDEDVEAELKKEQEKNSRTVTVEDRGAENGDITTIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +GS + LVG K GD E++ FPE++ K+LAGK
Sbjct: 172 GFVDGEAFEGGKGTDYPLTLGSGSFIPGFEDQLVGAKAGDHVEVKVTFPEEYQAKELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +K+V + +++D A F++ + + + + + E R +
Sbjct: 232 EAVFQCDVKKVEAKELPELDDDFAQDASEFDTLAEYKEDIKKNLTEKKEKEARAAKENAA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+D ++P++++ + +L M S + E+ +
Sbjct: 292 VDKAIENAQMEIPDAMLNTQVRQMLDDFSRRMQSQGLTMEQYFQFTGMTLEKMQEEMKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I E NI+ T+EE++ + + +K+ + L +++
Sbjct: 352 ALKRIQTRLVLEKIAEVENIQPTDEEVEEEFKKMADAYKMEVEKIKELLGDRE--LEQMK 409
Query: 414 APIFEDKVIDHILKSVQ 430
+ K + + +
Sbjct: 410 KDMAVQKAVTLVADEAK 426
>gi|295695311|ref|YP_003588549.1| trigger factor [Bacillus tusciae DSM 2912]
gi|295410913|gb|ADG05405.1| trigger factor [Bacillus tusciae DSM 2912]
Length = 431
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 80/438 (18%), Positives = 193/438 (44%), Gaps = 19/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + +E L+V + L + ++ + + K N+ GFR G+VP + ++ +G
Sbjct: 3 MITKWEKTEKNLGILEVEVDPGALAQALDQAFKKVVKKVNLPGFRKGRVPRAVFEARFGV 62
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ ++ +D ++ E + + + +P I + + +E +
Sbjct: 63 EALYNDALDLLLPEAYAKAVEEAQIEPVAQPEIDVVQ---------LEKGKPFIFKAKVT 113
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV--TVDY 177
+ P++E+ ++ + V V E+++D+++ + + + EV + ++ +D+
Sbjct: 114 VKPEVELGTYKGVTVEDKEFPVTEEDVDKELENLRRQHAQIEVVGEGGRVQNEDLVMIDF 173
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD LE ++ Q +GS E L+G+ G+ +EI FP+D+ ++ L G
Sbjct: 174 EGFVDGEPLEGGQGEDYQLEIGSGTFVRGFEEQLIGMTQGEDREIRVTFPDDYHVEGLRG 233
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ + ++ ++++ A FE+ +R K++Q +E R ++ Q
Sbjct: 234 KEALFKVHLHDIKRKRLPELDDEFAKDISEFETLEELRADLKNKLEQRAEQDHRTYLENQ 293
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
++D + + +VP ++E+E + + ++ +E+ +
Sbjct: 294 VVDKVVEEAVVEVPGVMIEHELEHLYHDFADRLQRQGIPTEMYFEVTGSSEEKVKEQMRP 353
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T +VL + ++ IE TEEE+++ L + ++ + P+ L L
Sbjct: 354 DAEKRVRTSLVLEAVQKQEGIEPTEEEVEAELEKAAQSMRMDAARLKELL--TPSQLDSL 411
Query: 413 RAPIFEDKVIDHILKSVQ 430
R + K ++ ++ +
Sbjct: 412 RQDLAIRKTVEFLVANST 429
>gi|317133442|ref|YP_004092756.1| trigger factor [Ethanoligenens harbinense YUAN-3]
gi|315471421|gb|ADU28025.1| trigger factor [Ethanoligenens harbinense YUAN-3]
Length = 447
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 75/432 (17%), Positives = 178/432 (41%), Gaps = 22/432 (5%)
Query: 11 LKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-LSETIDE 69
+ EL++ + + ++ + +K N+ GFR G P S I+ LYG+ + + I+
Sbjct: 12 NQYELEIAVEKDTFQEAVQKAYRKNVAKMNVPGFRKGHAPRSVIEKLYGEGVFYEDAINA 71
Query: 70 IIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSF 129
+ E + + R I I++ + + + P+ EI ++
Sbjct: 72 LYPLAYDEAVKEAGLEPVDRADIKIDKV----------DGEGFTFKATVTVKPEAEIGAY 121
Query: 130 DDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSVDNVILED 188
L+ T+ I + + +++ ++ + + N ++ +E GD +++ VD V E
Sbjct: 122 KGLKATKYIEKATDADVENELNRVRERNARVITLEDRAAEKGDIANINFEGFVDGVPFEG 181
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKE 248
+GS + +VG TG++ ++ FPE + ++LAGK + E
Sbjct: 182 GKAVGQDLELGSGQFIPGFEDQIVGHTTGEEFDVNVTFPEKYQAEELAGKPAVFKVKLNE 241
Query: 249 VFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
+ ++++ A F++ A + + I++H + + + ++LD +
Sbjct: 242 IKKRELPELDDEFAKDVSEFDTLEAYKDDVRKHIQEHKDEHAQNDAEEELLDQVVEGLKA 301
Query: 308 DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
++P+ + E + +Q + + S Q E+ Q + A+ +V +
Sbjct: 302 EIPDVMFERSIDSYVQDFDYRLQSQGLNLQTYLQYAGMEMEKFRQTFREQAEHQVKLRLA 361
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
L IG+ N+ VT+E++++ + + +++ + I ++ ID
Sbjct: 362 LEKIGQMENLTVTDEDIEAEYSRLAEEYKAEVERIKAAID-----RESITGDIKINRAID 416
Query: 424 HILKSVQIVDRK 435
+ S +I + +
Sbjct: 417 LVKNSAEITEVE 428
>gi|331090535|ref|ZP_08339388.1| trigger factor [Lachnospiraceae bacterium 2_1_46FAA]
gi|330405878|gb|EGG85406.1| trigger factor [Lachnospiraceae bacterium 2_1_46FAA]
Length = 428
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 82/435 (18%), Positives = 180/435 (41%), Gaps = 18/435 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L V + + + N R K +I GFR GKVP ++ +YG
Sbjct: 1 MSLQVEKLEHNMAKLTVEVSAEEFEKALNGAYMKQRGKISIPGFRKGKVPRQMVEKMYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + II E + + + +P I + + IE
Sbjct: 61 EIFYDDAANAIIPEAYAKAYDESELEIVSQPKIEVVQ---------IEKGKPFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYT 178
+ P++ + + L+V + V +KE++ ++ + + N E + D+V +D+
Sbjct: 112 LKPEVTLGEYKGLKVDKYSNRVTQKEVEERLVQEQEKNARTIAVEGRPVQDKDEVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N +GS E L+G + G + E+ FP+++ +LAGK
Sbjct: 172 GFVDGVAFEGGKGENYPLTIGSGAFIPGFEEQLIGAEAGKEVEVNVTFPQEYHAPELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ E+ + ++++ A F++ ++ KIK+ +++ + Q
Sbjct: 232 AAVFKCTVNEIKAKELPELDDEFAAEISEFDTLDELKADIKAKIKEQKNADGKRQKEDQA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
++ + T D+PE++++ + + M + E+ L+
Sbjct: 292 MEQVVENATMDIPEAMIDTQVRQMADDFAQRMQQQGLNMEQYFQFTGMTAEKMLEELRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I + NIE+T+E + L + + +K+ + + A+++
Sbjct: 352 AVKRIQTRLVLEAIVKAENIEITDERIDEELAKMAEAYKMEVEKLKEFMGENE--KAQMK 409
Query: 414 APIFEDKVIDHILKS 428
+ + + ++ +
Sbjct: 410 MDLAVQEAVTLVVDN 424
>gi|238855233|ref|ZP_04645552.1| trigger factor [Lactobacillus jensenii 269-3]
gi|282932473|ref|ZP_06337898.1| trigger factor [Lactobacillus jensenii 208-1]
gi|313471944|ref|ZP_07812436.1| trigger factor [Lactobacillus jensenii 1153]
gi|238832125|gb|EEQ24443.1| trigger factor [Lactobacillus jensenii 269-3]
gi|239529128|gb|EEQ68129.1| trigger factor [Lactobacillus jensenii 1153]
gi|281303422|gb|EFA95599.1| trigger factor [Lactobacillus jensenii 208-1]
Length = 437
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 80/443 (18%), Positives = 175/443 (39%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EL I + ++ I+ + GFR G V YG+
Sbjct: 1 MSAKWEKTGKTTGELTFEISQEEIKLGLDQAFNRIKKNLRVPGFRKGHVSRVIFNQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + A +P I + D ++ +
Sbjct: 61 EALYEDALNLVLPNAYTAAVKEAKIDAVGQPKIEPVSMDKD---------KAWTMKATVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + ++V + V +K+ID ++ + + N +K+ ++ GD VT+DY
Sbjct: 112 VKPEVELGEYKGIEVPKQNTRVYQKDIDAELDKKREQNAELVLKDDKAAKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + S +N +GS + L G K GD+ ++ FPED+ KDLAGK+
Sbjct: 172 TIDGKAFDGGSAENYSLELGSNTFIPGFEDQLEGHKAGDEVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV S ++++ A E+ ++ +++K+ E + ++
Sbjct: 232 AHFATKLHEVKSKELPKLDDEFAKDVDDSVETLDELKEKIKKQLKEDKEAAAQDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ ++P+++++ + + L + M Q +++
Sbjct: 292 ITTAVKNAKIDEIPDAMIQEDVDTQLNQYLGNMQRQGIDPQTYFKLTNTTEQQLRAQLST 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K +++ ++E++ + + EK + + L
Sbjct: 352 DAAERVKTNLVLEAIVAKEDLKADKKEIEQEIKDLAAEYNMDEKTVRNTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
I K +D I S + V +
Sbjct: 407 SHDIAVRKAMDLITDSAKQVGKA 429
>gi|260664594|ref|ZP_05865446.1| trigger factor [Lactobacillus jensenii SJ-7A-US]
gi|260561659|gb|EEX27631.1| trigger factor [Lactobacillus jensenii SJ-7A-US]
Length = 437
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 80/443 (18%), Positives = 175/443 (39%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EL I + ++ I+ + GFR G V YG+
Sbjct: 1 MSAKWEKTGKTTGELTFEISQEEIKLGLDQAFNRIKKNLRVPGFRKGHVSRVIFNQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + A +P I + D ++ +
Sbjct: 61 EALYEDALNLVLPNAYTAAVKEAKIDAVGQPKIEPVSMDKD---------KAWTMKATVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + ++V + V +K+ID ++ + + N +K+ ++ GD VT+DY
Sbjct: 112 VKPEVELGEYKGIEVPKQNTRVYQKDIDAELDKKREQNAELVLKDDKAAKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + S +N +GS + L G K GD+ ++ FPED+ KDLAGK+
Sbjct: 172 TIDGKAFDGGSAENYSLELGSNTFIPGFEDQLEGHKAGDEVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV S ++++ A E+ ++ +++K+ E + ++
Sbjct: 232 AHFATKLHEVKSKELPKLDDEFAKDVDDSVETLDELKEKIKKQLKEDKEAAAQDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ ++P+++++ + + L + M Q +++
Sbjct: 292 ITTAVKNAKIDEIPDAMIQEDVDTQLNQYLGNMQRQGIDPQTYFKLTNTTEQQLRAQLST 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K +++ ++E++ + + EK + + L
Sbjct: 352 DAAERVKTNLVLEAIVAKEDLKADKKEIEQEIKDLAAEYNMDEKTVRNTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
I K +D I S + V +
Sbjct: 407 SHDIAVRKAMDLIADSAKQVGKA 429
>gi|224367555|ref|YP_002601718.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Desulfobacterium autotrophicum HRM2]
gi|259533576|sp|C0QGS9|TIG_DESAH RecName: Full=Trigger factor; Short=TF
gi|223690271|gb|ACN13554.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Desulfobacterium autotrophicum HRM2]
Length = 450
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 90/458 (19%), Positives = 201/458 (43%), Gaps = 13/458 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ + +K+ L + IP + + +++ A +KGFR GK+P +++ + K
Sbjct: 1 MQLNIEEKSSVKKVLHIEIPKEDVAKELDTAYNELKKTATVKGFRKGKIPRKILETRFSK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ ++ + +++ E L + P + E + L +S ++
Sbjct: 61 DVHADLVPHLVQNAFSEALDEHKFNLVGGPQVDPPE---------LTPGEALSFDISIEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
+P++E F +++ + + E ++E+D Q+ I K E +E ++ D V +DY
Sbjct: 112 MPELEAVDFKGIELKKTMYEATDQEVDAQIQMIRKTMATKEKVTEERPVKVEDFVLIDYQ 171
Query: 179 VSVDNVILEDQ-SKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD + +N +GS L +E +E L+G + +I+ + +D + LAG
Sbjct: 172 GFVDGAPCDAAPKVENYVMAIGSNTLPAEFSEKLLGAIPVKEMDIDVVYADDDKDEALAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K V ++KE+ + V++ L +++ ++ +K+ E + ++ Q
Sbjct: 232 KTVIYKVTLKEIQEQILPPVDDTLVENLGQYKNLDELKAAILDNLKKGYEQRTQHELSEQ 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I + K F+VP+++V+ E GI+ + + N K ++V + Y +A++
Sbjct: 292 IFTDLLEKIEFEVPDTMVDAELQGIIAEAEQAYAQNNIKLEDVGLSQDFLKTQYRGVAEK 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ I+LG I ++ N+E+TE+E+++ + + + F+ L +
Sbjct: 352 QARRHILLGKIIDQENLELTEDELEAGYAEMALGMNASVDAVKNFFKMDGRQLEYYKHTQ 411
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLL 454
E K + I++ + + + S+ +K
Sbjct: 412 LEKKAVRLIIEQGSVTEVAPEVETEVSESAADVEDKTD 449
>gi|261366993|ref|ZP_05979876.1| trigger factor [Subdoligranulum variabile DSM 15176]
gi|282571111|gb|EFB76646.1| trigger factor [Subdoligranulum variabile DSM 15176]
Length = 460
Score = 182 bits (460), Expect = 1e-43, Method: Composition-based stats.
Identities = 88/439 (20%), Positives = 187/439 (42%), Gaps = 21/439 (4%)
Query: 1 MQ-VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M+ + + E EL I + + + K + GFR G P + I+ +YG
Sbjct: 1 MKLISCEKLEKSMVELQFSIDAETFKSAVAAAFKRESKKYTVPGFRKGHAPRAMIEKMYG 60
Query: 60 KSILS-ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
K + + I+++ E + + P+ + D L++
Sbjct: 61 KDLFQYDAINDLFPENYEAAVKEAGIEVVGGPAPEVVSMSED---------EGAVLKVKV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
+ P++E+ + L VT+D+ VDE ++D ++ + N +E E++ GD T+D+
Sbjct: 112 AVKPEVELGEYVGLTVTKDVKTVDEADVDAEIKRMQDRNGRLLTREGEAQNGDTATIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E ++ ++GS E +VG K GD+ ++ FPE++ ++LAGK
Sbjct: 172 GFVDGKAFEGGKAEHYALVLGSGSFIPGFEEQVVGHKAGDEFDVNVKFPEEYQAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV +++D A +++ ++ + I + E QK++ +
Sbjct: 232 DATFKIKLHEVQYKELPELDDDFAKDVSEYDTLDELKDSIRKGIAANHEKQAEQKMENDL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+D + N D+P++++E + ++Q ++ +S Q Q + ++ + +
Sbjct: 292 IDQVVNGMKADIPDAMIEGRMDELVQDFQYRISQQGLKLEQYLQYMGMNKDQFKEQFREQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+++V + + I K NIE TEEE + + + + K+ ++
Sbjct: 352 AEKQVKMRLAMEAIVAKENIEATEEEFEEEVKRIADAYQMEADKVKSLVNA-----EAVK 406
Query: 414 APIFEDKVIDHILKSVQIV 432
+ +K ID + + +V
Sbjct: 407 KDLAVNKAIDFVKEKANVV 425
>gi|172058156|ref|YP_001814616.1| trigger factor [Exiguobacterium sibiricum 255-15]
gi|229558048|sp|B1YJW1|TIG_EXIS2 RecName: Full=Trigger factor; Short=TF
gi|171990677|gb|ACB61599.1| trigger factor [Exiguobacterium sibiricum 255-15]
Length = 430
Score = 182 bits (460), Expect = 2e-43, Method: Composition-based stats.
Identities = 86/440 (19%), Positives = 182/440 (41%), Gaps = 18/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + G L P+ + ++ + + N GFR GK+P + +YG+
Sbjct: 1 MTAKWEKQSGSLGVLTYEAPAEAFDKAVDQAFKKVVKTLNTPGFRKGKMPRAMFNKMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D + ++ + + + +I + +E ++ ++++
Sbjct: 61 EALYQDALDILYQDTIEGAVVESGIEPIALDNIDVET---------LEKGKPVEFKITFV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
I P + + L+ T +V ++++D ++ + + ++ E GD V D+
Sbjct: 112 IEPDATLGEYKGLEYTAVETDVTDEDVDAELKTMQERGAELVVKEDGAIENGDTVVFDFA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + +N ++GS + E +VGLK+G+QK+I+ FPE++ LAGK
Sbjct: 172 GFDGENQFDGGTAENYSLVIGSGNFIPGFEEQMVGLKSGEQKDIDVTFPEEYHEASLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V +I E+ + + ++ A + E S ++ +++ + ++ +
Sbjct: 232 PVVFKVTIHEIKAQELPELTDEFAKEMDEEVSSLDELKTKIRTRLENTRKQEADASMRDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHM 352
+++ + T D+PE +VENE ++Q+ + S N Q + +E
Sbjct: 292 LVEAATKNATVDLPEVMVENEVERMVQEFTQRIQSQGIDLNMYFQLTGTTEEAMRTEMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ RV +VL I IEVTEEE Q+ L + L+ L L
Sbjct: 352 QAEERVKARLVLKQIVADEKIEVTEEEAQAELQSMSELYNI-PADQLETMLAPQGGLDTL 410
Query: 413 RAPIFEDKVIDHILKSVQIV 432
+ + K ID ++ + +
Sbjct: 411 KGDLQFRKAIDVLVDNAKAK 430
>gi|313819602|gb|EFS57316.1| trigger factor [Propionibacterium acnes HL046PA2]
Length = 397
Score = 182 bits (460), Expect = 2e-43, Method: Composition-based stats.
Identities = 73/405 (18%), Positives = 162/405 (40%), Gaps = 22/405 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +L + +P + L S ++ +DI ++ N+ GFR GKVP I +G+
Sbjct: 1 MPSSLEKLSTNRVKLTIEMPFDELKPSLDKAYKDIANQVNVPGFRKGKVPAPVIDQRFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I++ + + + + +P I + + +E ++ D
Sbjct: 61 GVVLQEAINDALPAAYGKAIEENTVVPLGQPEIEVTK---------LEDGEVVEFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++ + V EV ++++D ++ + + E + D VT+D
Sbjct: 112 VRPDFDLPDVSAISVEVPAVEVPDEDVDERVETLRQRFATNTEVERAAAKDDLVTIDLAG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D LED + V + VGS + E + GLK G+ E L G+
Sbjct: 172 TRDGEALEDATASGVTYKVGSEGMLEGLDEAVTGLKAGESAEF----HSTLVGGPLRGQD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ +V V++D A F++ MR ++ + + ++L
Sbjct: 228 ADIKVTVTKVCEQELPAVDDDFAQLVSQFDTVDEMRADLRTALENMARLDQAADARDKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-------EEDLQYYH 351
+ + +K ++P SL+++E Q+V +++ A + ++
Sbjct: 288 EEVISKIDIELPTSLIDSELEARRQQVNQQLAQAGMTVEEYLEDSEEEVDNADDFWAEIE 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEK 396
+ + IVL + + + I V + E+ L+++ + +
Sbjct: 348 KRSLDALKAQIVLDKMADDDEIGVEQNELTELLFRKAQQNGTSPR 392
>gi|301165601|emb|CBW25172.1| trigger factor [Bacteriovorax marinus SJ]
Length = 426
Score = 182 bits (460), Expect = 2e-43, Method: Composition-based stats.
Identities = 83/435 (19%), Positives = 178/435 (40%), Gaps = 12/435 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++L + LT I + ++KGFR GK PLS ++ +YG
Sbjct: 1 MSYTVETINDCTKKLVFNFETLDLTAEIKTAIIQKQKTTSLKGFRKGKAPLSMVEQVYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I SE +++ ++ + + K + R P+ + E +K +I
Sbjct: 61 QIQSEALNQFVQNQFFDAVQKEELRICGYPTFE---------NMNYEEGKSVKFDALVEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYT 178
P +E+ + D + V ++ V ++++ + + E + E G +++
Sbjct: 112 FPTVEVKNLDKITVAKETVSVSDEDVAAMEKNYLGSRAEMKEVEGDVKLEKGHFAVLNFQ 171
Query: 179 V-SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
D E+ + +GS + ++G+K G++K IE FP D+ ++DL
Sbjct: 172 GEKEDGERPENMKGEEFLLEIGSGQFIPGFEDGMIGMKKGEKKNIELTFPGDYHVEDLKE 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
KV + E+ + ++LA GFES + + + E V +K+ ++I
Sbjct: 232 AKVTFETELLEIKQKIFPDFTDELAKEFGFESVEDFKTKTKDNLFKQKEREVAEKMHQEI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
L+ + TFDVP SLV + + + + + + + E+ A +
Sbjct: 292 LEKLIEANTFDVPASLVSQQEASLREDLSRNLKGQGFNDEMLKEYFEKWSGDMTDKATFQ 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V +G++L + +K N+E ++ + + + + ++ ++ L I
Sbjct: 352 VRSGLILDNLAKKFNVEASDSDFDAKIEEMAAGSGMQADQIKSYYASDAKLKGNLMYAIR 411
Query: 418 EDKVIDHILKSVQIV 432
E+K + I + +++
Sbjct: 412 EEKTFEKIKEEIKLK 426
>gi|55820230|ref|YP_138672.1| trigger factor [Streptococcus thermophilus LMG 18311]
gi|55822121|ref|YP_140562.1| trigger factor [Streptococcus thermophilus CNRZ1066]
gi|67461639|sp|Q5M1S9|TIG_STRT1 RecName: Full=Trigger factor; Short=TF
gi|67461642|sp|Q5M6C2|TIG_STRT2 RecName: Full=Trigger factor; Short=TF
gi|55736215|gb|AAV59857.1| trigger factor (prolyl isomerase) [Streptococcus thermophilus LMG
18311]
gi|55738106|gb|AAV61747.1| trigger factor (prolyl isomerase) [Streptococcus thermophilus
CNRZ1066]
Length = 427
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 85/441 (19%), Positives = 181/441 (41%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + + I +++ + ++ I+ N+ GFR G +P + +G+
Sbjct: 1 MSVSFENTATNRGVVTFTIGQDKIQPALDQAFNKIKKNLNVPGFRKGHIPRAVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ I+ +++ +P I + I D L
Sbjct: 61 EALYDDALNAILPAAYEAAIAELGLDVVAQPKIDVKS---------IGKGQDWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+V+ + EV ++E+D ++ KN VK+ +E GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVSVEVSKEVTDEEVDAKLENERKNLAELIVKDGAAEYGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + +N +GS + LVG K+GD+ E++ FPED+ DLAGK
Sbjct: 172 GSVDGVEFDGGKGENHSLELGSGQFIPGFEDQLVGAKSGDEVEVKVTFPEDYQATDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++LA ++ ++ ++++ E V+
Sbjct: 232 AAVFVTKVNEVKAKEVPALDDELAKDLDDEVDTLDELKAKYRKELEAAKEIAFDDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
LD ++P +VENE + + + + + E+ + Y
Sbjct: 292 ALDLAVENAEIVELPAEMVENEVHRAMNEFMGNLQRQGISPEMYFQITGTTQEDLRKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ +RV T +V+ + + T+EE+Q + + ++ +
Sbjct: 352 ADSDKRVKTNLVIEAVAAAEGFDATDEEIQKEINDLAAEYNMEVSQVSELLSP-----EM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I S ++
Sbjct: 407 LKHDIAMKKAVEVITSSAKVK 427
>gi|269219686|ref|ZP_06163540.1| trigger factor [Actinomyces sp. oral taxon 848 str. F0332]
gi|269210928|gb|EEZ77268.1| trigger factor [Actinomyces sp. oral taxon 848 str. F0332]
Length = 489
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 76/477 (15%), Positives = 176/477 (36%), Gaps = 30/477 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + K +L V +P + + ++I + NI GFR G +P I++ +G+
Sbjct: 1 MKSSVENLDPTKVKLTVEVPFEEFKPAIDAAAKEIGKQVNIPGFRRGHIPARVIEAQFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I+ E ++ + + + RP + + T DL ++ +
Sbjct: 61 GVIVEEAVNSSLDRYYGTAVEENSLHPMSRPEVDVT-----AVPAEKGSTEDLVFTVTVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I I + D EV E +++ ++ + + + E ++ GD VTVD
Sbjct: 116 VRPEIAIPEPSSFTIVVDPAEVTEDDVEERLTALRERFGTLKAVERAAKDGDYVTVDMVA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D+ ++ S V + +GS + L GLK G+ + +
Sbjct: 176 KIDDEEVDSVSG--VSYKIGSGTMVDGIDGALTGLKAGESATFTTELAGGEHEGE----E 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +V ++D A F++ +R + ++ + +
Sbjct: 230 AEVTVVANDVKESELPEADDDFAQLASEFDTIEELREDLRGEAEKAKASAQVYAARDLLS 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + F +P+ +E E L+ E+ +E ++R +
Sbjct: 290 EKLRDAVDFPLPKEALEEEVVRHLEMEGKELG-------------DEHEPEARAESERLM 336
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++L + E +++ + E+ + + QQ + + + + N ++ A +
Sbjct: 337 RDQLLLDVLAEAFAVDIEQNELFNFMVQQAQAYGMDPNEFIQAAAQ-ANQVSSFAAELAR 395
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEI 472
K + L+ V +VD V + + E P + + + A ++I
Sbjct: 396 GKALIAYLRLVNVVDSNGEAVDVGAVVGEAPEDQPTPAFGEKASKALEPFDPASAKI 452
>gi|184200753|ref|YP_001854960.1| trigger factor [Kocuria rhizophila DC2201]
gi|238689203|sp|B2GGB4|TIG_KOCRD RecName: Full=Trigger factor; Short=TF
gi|183580983|dbj|BAG29454.1| trigger factor [Kocuria rhizophila DC2201]
Length = 448
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 67/466 (14%), Positives = 170/466 (36%), Gaps = 23/466 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + + ++ + I L E +++ ++ I GFR GKVP I G
Sbjct: 1 MKSAVEKLNPTEAKITIDIAYTDLKPFVQETYKELANQIQIPGFRKGKVPSKLIDQRVGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ ++E + + L++ + +P + + + D K+ +S
Sbjct: 61 DFVVENALNEGLNAFYQQALTENELTPLSQPQVEVLS-----KPEENDREADTKVEISVA 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+IE+ + L++ + E ++ + + E+ + + + GD VT+D
Sbjct: 116 IRPEIELPDYKGLEIQVEAREATAEDEQKALDELRARFGTLKTVDRPAAEGDHVTLDLQA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD ++ + ++ + VGS + E + GL G+ E + + +G +
Sbjct: 176 LVDGEEVD--AANDLSYEVGSGTMLEGIDEAVTGLSAGEDATFETTL----AGGEHSGAE 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V +++ A F++ + ++ ++ + + + + ++L
Sbjct: 230 ATVKVKVTAVKERELPEADDEFAQLASEFDTIAELKEDLKKQAAESAVVEQGIEARDKVL 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + VPE ++E++ + + S EE A+
Sbjct: 290 DKLVELIEVPVPEKVIEDQLAQHFDSEQAQAS------AEPGHDTEEHRAEVRQNAENAF 343
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
I+L + E + V + E+ + ++ + + +
Sbjct: 344 RNEIILDAVAEAEEVGVEQSELIDYIINMSQQYGMDPNQFAQMLDGS-GQAGMMVGEVRR 402
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVE 461
K + +L++ + D V ++ +++ ++S E
Sbjct: 403 RKALAKVLETATVTDSNGETVDLSSFVGTGDDAETDEVETEASATE 448
>gi|312869020|ref|ZP_07729197.1| trigger factor [Lactobacillus oris PB013-T2-3]
gi|311095446|gb|EFQ53713.1| trigger factor [Lactobacillus oris PB013-T2-3]
Length = 438
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 78/441 (17%), Positives = 179/441 (40%), Gaps = 25/441 (5%)
Query: 1 MQVIEK-FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M + S+ K L I + + +E + R + GFR G+VP +YG
Sbjct: 1 MSAKWERDSDASKGTLTFDIDVDTIKKGIDEAFVETRKNITVPGFRKGRVPRQIFNQMYG 60
Query: 60 KS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + + +++++ + + + + +PSI I E L
Sbjct: 61 EESLYQDALNKVLPDAYSAAVKETGIKPVDQPSIDIKSM---------EKGQPWTLTAEV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVD 176
+ P++++ + ++V + V + ++D ++ + + + ++ + GD V +D
Sbjct: 112 AVEPEVKLGDYKGMEVPEQDTTVSDADVDSEIEKKRQQQAELVLKDEDQAAANGDTVVID 171
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
Y SVD + S N +GS + LVG K+GD +++ FPED+ K+LA
Sbjct: 172 YEGSVDGEKFDGGSANNYSLELGSGSFIPGFEDQLVGHKSGDDVDVKVTFPEDYHAKELA 231
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
GK + E+ +++D A ++ ++ +++++ + + ++
Sbjct: 232 GKDALFKVKVHEIKEKQLPELDDDFAKDVDEDVDTLDELKDKTRKQLQEQKDNQAKGAIE 291
Query: 295 RQILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQY 349
++ D+P+++++ + N +Q+ M Q +++ +
Sbjct: 292 DAAIEKAVANAEIEDIPQAMLDEDTNRQMQQYLAGMQQQGISPQMYFQITGTKEDDLKKQ 351
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A +RV T +VL I + +E +E+E++ + ++ E + K
Sbjct: 352 FANDAAQRVKTNLVLEAIVDDAKLEASEDEIKDEIKDLAKQYGMEEDAVEKALSKD---- 407
Query: 410 AELRAPIFEDKVIDHILKSVQ 430
L I K +D + S +
Sbjct: 408 -MLSHDIKIKKAVDLVADSAK 427
>gi|315302899|ref|ZP_07873638.1| trigger factor [Listeria ivanovii FSL F6-596]
gi|313628731|gb|EFR97125.1| trigger factor [Listeria ivanovii FSL F6-596]
Length = 427
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 87/437 (19%), Positives = 177/437 (40%), Gaps = 21/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKQEGNVGXXXFEIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + P + I E L
Sbjct: 61 EALYQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESM---------EKGETWVLTADVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV-DYT 178
+ P++++ + L+V + E+ +E++ ++ ++ + VKE + D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRDEELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V + E+ + ++++LA E+ ++ S ++++ + V Q + +
Sbjct: 232 PVVFKVKLHEIKTKEVPTLDDELAKDIDEEVETLDELKEKISNRLQEAKKESVAQAKQEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++ D+P ++V +E + ++ ++ + Q +E
Sbjct: 292 VIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMEQ 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E NIE TEE + + ++ + + ++EL
Sbjct: 352 DAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGMEKDAVRAAL----GDMSEL 407
Query: 413 RAPIFEDKVIDHILKSV 429
++ + K ID +L S
Sbjct: 408 KSDLKIRKAIDVLLDSA 424
>gi|313891572|ref|ZP_07825182.1| trigger factor [Dialister microaerophilus UPII 345-E]
gi|313120031|gb|EFR43213.1| trigger factor [Dialister microaerophilus UPII 345-E]
Length = 488
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 86/476 (18%), Positives = 202/476 (42%), Gaps = 18/476 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + + K L + + + + F + + I ++ N+ GFR GK P ++ +GK
Sbjct: 1 MKVKVEALDQHKVSLHIEVEAEAVVKGFKQAVSRISNRVNVPGFRKGKAPRKTLEMRFGK 60
Query: 61 SILS-ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+I++ E D +I + + E L++ +P DI + + ++
Sbjct: 61 AIVAAEAQDIVINKAMNEALAENKLVPVTQP---------DIKADVFSEKEGATFTATFV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
P++++ + L+V + ++ +++++ Q+ A+ + + + +E E GD V +D+
Sbjct: 112 KQPEVKLGEYKGLEVEKHDVKITDEQVEEQLKMAAQQSARLKAVPEGSEVEKGDYVFIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+VD E K +GS + L G K GD ++ FP+ + +L
Sbjct: 172 KGTVDGKPFEGGEGKGYPLEIGSNSFIPGFEDQLKGHKAGDDVTVKVKFPKPYFKAELEN 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K I +V +N++ A + FE+ +R Q+++ + ++
Sbjct: 232 KDAEFAVHINDVKRKEVPELNDEFAKSVGKFETIKDLRDSLKQQMQLQAVQQAEDMYRQA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+++ D+P+ +++ + I+ +++ M + N +NV+ +EE + Y
Sbjct: 292 LVEKAVANSEVDIPKEMIDQRIDEIISEMKLNMQARNLDFDTYLKNVNKTEEEFRKQYEE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A + V +VLG I +K + VT+ ++ +Y +F K +++ ++ N + L
Sbjct: 352 NAAKEVRQSLVLGAIADKEKLTVTDNDLSMEVYFMAQQFNAEPKDVVNIIKE-ENRVGML 410
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEA 468
+ K I + + K + + ++ +++ + E+
Sbjct: 411 VNNVRRKKAAAFIFGEAKKDEVKEVKEVKEEKKEKAESNLASKTVKELKAYAEEKG 466
>gi|259503087|ref|ZP_05745989.1| trigger factor [Lactobacillus antri DSM 16041]
gi|259168953|gb|EEW53448.1| trigger factor [Lactobacillus antri DSM 16041]
Length = 438
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 179/441 (40%), Gaps = 25/441 (5%)
Query: 1 MQVIEK-FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M + S+ K L I + + +E + R K + GFR G+VP +YG
Sbjct: 1 MSAKWERDSDASKGTLTFDIDVDTIKKGIDEAFVETRKKITVPGFRKGRVPRQIFNQMYG 60
Query: 60 KS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + + +++++ + + + + +PSI I E L
Sbjct: 61 EESLYQDALNKVLPDAYSAAVKETGIKPVDQPSIDIKSM---------EKGQPWTLTAEV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVD 176
+ P++++ + ++V + V + ++D ++ + + + + + GD V +D
Sbjct: 112 AVEPEVKLGDYKGMEVPEQDTTVSDADVDSEIEKKRQQQAELVLKDDDQAAANGDTVVID 171
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
Y SVD + S N +GS + LVG K+GD E++ FPED+ K+LA
Sbjct: 172 YEGSVDGEKFDGGSANNYSLELGSGSFIPGFEDQLVGHKSGDDVEVKVTFPEDYHAKNLA 231
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
GK + E+ +++D A ++ ++ +++++ + + ++
Sbjct: 232 GKDAIFKVKVHEIKEKQLPELDDDFAKDVDEDVDTLDELKDKTRKQLQEQKDNQAKGAIE 291
Query: 295 RQILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQY 349
++ D+P+++++ + N +Q+ M Q +++ +
Sbjct: 292 DAAIEKAVANAEIEDIPQAMLDEDTNRQMQQYLAGMQQQGISPQMYFQITGTKEDDLKKQ 351
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A +RV T +VL I + +E +E+E++ + ++ E + K
Sbjct: 352 FANDAAQRVKTNLVLEAIVDDAKLEASEDEIKDEIKDLAKQYGMEEDAVEKALSKD---- 407
Query: 410 AELRAPIFEDKVIDHILKSVQ 430
L I K +D + S +
Sbjct: 408 -MLSHDIKIKKAVDLVADSAK 427
>gi|297205851|ref|ZP_06923246.1| trigger factor [Lactobacillus jensenii JV-V16]
gi|297148977|gb|EFH29275.1| trigger factor [Lactobacillus jensenii JV-V16]
Length = 437
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 79/443 (17%), Positives = 175/443 (39%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EL I + ++ ++ + GFR G V YG+
Sbjct: 1 MSAKWEKTGKTTGELTFEISQEEIKLGLDQAFNRVKKNLRVPGFRKGHVSRVIFNQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + A +P I + D ++ +
Sbjct: 61 EALYEDALNLVLPNAYTAAVKEAKIEAVGQPKIEPVSMDKD---------KAWTMKATVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + ++V + V +K+ID ++ + + N +K+ ++ GD VT+DY
Sbjct: 112 VKPEVELGDYKGIEVPKQNTRVYQKDIDAELEKKREQNAELVLKDDKAAKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + S +N +GS + L G K GD+ ++ FPED+ KDLAGK+
Sbjct: 172 TIDGKAFDGGSAENYSLELGSNTFIPGFEDQLEGHKAGDEVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV S ++++ A E+ ++ +++K+ E + ++
Sbjct: 232 AHFATKLHEVKSKELPKLDDEFAKDVDDSVETLDELKEKIKKQLKEDKEAAAQDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ ++P+++++ + + L + M Q +++
Sbjct: 292 ITTAVKNAKIDEIPDAMIQEDVDTQLNQYLGNMQRQGIDPQTYFKLTNTTEQQLRAQLST 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K +++ ++E++ + + EK + + L
Sbjct: 352 DAAERVKTNLVLEAIVAKEDLKADKKEIEQEIKDLAAEYNMDEKTVRNTLTDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
I K +D I S + V +
Sbjct: 407 SHDIAVRKAMDLITDSAKQVGKA 429
>gi|158321200|ref|YP_001513707.1| trigger factor [Alkaliphilus oremlandii OhILAs]
gi|166987584|sp|A8MIS9|TIG_ALKOO RecName: Full=Trigger factor; Short=TF
gi|158141399|gb|ABW19711.1| trigger factor [Alkaliphilus oremlandii OhILAs]
Length = 428
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 85/438 (19%), Positives = 197/438 (44%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M E ++ L V++ + + ++ N+ ++S+ NI+GFR GK P ++ YG
Sbjct: 1 MSSEVIKRENVEVTLKVVVEAAKFEEAINKAYNKMKSRFNIQGFRKGKAPRKIVEKFYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E + + E+ L + + P + + + I D+ +
Sbjct: 61 EVFYEEAFNIVFPEVYEAALDEHNIDPVDHPKVDLED---------IVAGQDVVFTAVVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
++P+ E++ + ++V + V E++I R++ +A+ N V++ + GD V +DY
Sbjct: 112 VMPEFEVADYVGIEVEKKEYNVQEEDIQRELDGLAEKNSRMITVEDRAVKEGDMVIIDYK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + E + + +GS E LVG G++ E++ FPE++ ++LAGK
Sbjct: 172 GMVDGIAFEGGTAERQSLTIGSGQFIPGFEEQLVGKNIGEEVEVQVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I E+ V++++ A F++ + + +++ ++ Q+ + +
Sbjct: 232 AAIFEVKIHEIKEKEVPVIDDEFAKDVSEFDTLEELTNDIKKNLEEDAKNRAIQEQRNDV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHML 353
++ I+NK ++P ++V + + +L + + + +E+ +
Sbjct: 292 IEAIANKVELEIPSAVVNRQIDNMLADFDYRLQFQGLNLEYYLQLTGTKEEDLREQMRPD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + V ++L IG K NI T+EE++ L + ++ +K+ + ++ L ++
Sbjct: 352 AVKTVKNELILEKIGAKENIVATDEELEEQLEKMAKQYNQEIEKLKTNLRQ--QDLNAIK 409
Query: 414 APIFEDKVIDHILKSVQI 431
I K +D + ++ ++
Sbjct: 410 EGIIIRKTVDFLAENAKL 427
>gi|148241166|ref|YP_001226323.1| trigger factor [Synechococcus sp. RCC307]
gi|172047799|sp|A5GQ11|TIG_SYNR3 RecName: Full=Trigger factor; Short=TF
gi|147849476|emb|CAK26970.1| Trigger factor [Synechococcus sp. RCC307]
Length = 491
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 75/484 (15%), Positives = 190/484 (39%), Gaps = 25/484 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V G + L+V +P++R S+ +E + + GFR G+VP + G
Sbjct: 6 KVKTSSLPGSRLALEVGVPADRCKASYEAAVERLSRSVRLPGFRKGRVPKPVLLQQIGPL 65
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + +++++ ++ + + + +PS+ G + + +L + L D+
Sbjct: 66 RVKASALEDLVDSVLRDAVEQEKVEVLGQPSL---SGNFEELLEKFDPAKELVVTLEMDV 122
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVDY 177
P + S L + D +D + + + + V+
Sbjct: 123 APTPTLKSTKGLSAEAESVAYDPARVDELLDQSRRQLATLVPVSDRAAAMGDVAVVSFSG 182
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
S D +E S + + + S E +VG+K GD+K+++ FP+D+ + G
Sbjct: 183 VFSDDKSAIEGGSANGLDVELEEGRMISGFVEGVVGMKPGDKKDVDCQFPDDYPEETCRG 242
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K + S+ E+ +++ A + ++ S +R ++KQ +E +
Sbjct: 243 RKALFSISLDELKGRELPELDDAFAQQASDKKTLSELREDLENRLKQDAEQRQKNNRHEA 302
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
+L + ++ ++PESL++ E N +LQ+ +M+ + + + + + Q A
Sbjct: 303 LLKALVDQLEVELPESLIKEEINSLLQETAAQMAQQGMDVKKLFTPETVQNLAQASRGEA 362
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL-AELR 413
R+ + L + + I V ++++++ + + F K P L +
Sbjct: 363 TERLQRSLALKALAKAEGISVADKDLEAKIKEVSAGFSDTNKI-------DPQRLRDAVA 415
Query: 414 APIFEDKVIDHILKSVQIV-------DRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
+ + ++ + ++ ++ D+ + + +++ E + +K +
Sbjct: 416 EDLLRETLLSWLEENAKLTMVDPASEDKPAKASKAKSSKAKAEKEPAAEGQAKAKPAAKT 475
Query: 467 EAPS 470
Sbjct: 476 SKSK 479
>gi|182438715|ref|YP_001826434.1| trigger factor [Streptomyces griseus subsp. griseus NBRC 13350]
gi|326779364|ref|ZP_08238629.1| Trigger factor [Streptomyces cf. griseus XylebKG-1]
gi|238688993|sp|B1VXA5|TIG_STRGG RecName: Full=Trigger factor; Short=TF
gi|178467231|dbj|BAG21751.1| putative cell division trigger factor [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326659697|gb|EGE44543.1| Trigger factor [Streptomyces cf. griseus XylebKG-1]
Length = 471
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 78/425 (18%), Positives = 169/425 (39%), Gaps = 21/425 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L + +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLSIEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEGELNVLGQPEVDITE---------LKDGELLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IEI + ++VT D EV ++E+++ + ++ + A E + GD VT+D
Sbjct: 112 VRPEIEIPDYSGIEVTVDALEVTDEEVEKAVEQLRERFAATNPVERAAADGDVVTIDLQA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED V + +GS +L E + GL+ G E F GK
Sbjct: 172 KVDGEVLEDGVADGVSYTIGSGELLDGIDEAVTGLEAG----GEATFTSQLKGGSAEGKD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +++D A + F++ ++ ++++ ++ + + ++L
Sbjct: 228 AEVTVKVTAVAARELPELDDDFAQMASEFDTLEELKADSRKRLETTKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
+ + +PE L+ +E + + + EE
Sbjct: 288 EELLKLAEVPIPEKLLADEVQTRKHNLEHHQLGQMGLDLEKYLEIQGKTLEEFENETSEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T +L + K + V +EE+ L ++ + + + L
Sbjct: 348 AIKGIKTQFILDELVNKEKLNVNQEELTEHLMRRAASSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFE 418
+
Sbjct: 407 GEVAR 411
>gi|313884083|ref|ZP_07817849.1| trigger factor [Eremococcus coleocola ACS-139-V-Col8]
gi|312620530|gb|EFR31953.1| trigger factor [Eremococcus coleocola ACS-139-V-Col8]
Length = 427
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 80/437 (18%), Positives = 177/437 (40%), Gaps = 23/437 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L IP+ + + ++ + GFR GKVP ++YG+
Sbjct: 1 MTVNFEKTNSNEGVLTFEIPAEEVKKGLDLAFNKVKKTVTVPGFRKGKVPRKIFNNVYGE 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ ++ E + + + +P I IE ++ +
Sbjct: 61 TALYDEALNAVLPEAYGKAVEESGLDIVGQPKFDIES---------IEKGQPWVMKANVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + +L V + EV ++++D+++ E ++ +KE+ +E GD V +DY
Sbjct: 112 LKPEVKLGDYKNLTVEKQDREVSDEDVDQRIEETRQSLAELVLKESAAENGDTVVIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
SVD + E + N +GS + L+G K GD E++ FPE++ ++LAGK
Sbjct: 172 SVDGEVFEGGTASNHSLELGSNQFIPGFEDQLIGAKPGDDVEVKVTFPEEYHAEELAGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV + ++++ A E+ + ++ + E ++ V+
Sbjct: 232 AIFKVKVHEVKTKELPELDDEFAKDADEEVETFEEYKNKVRVQMTEEKEAHAKEVVEDLA 291
Query: 298 LDYISNKYT--FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
L +P+ +V E + + +S + + + + + +
Sbjct: 292 LRQAVENAEIVDGIPQEMVHEEVHRQMDFYLNNLSRQGISPEMYFNITGTTEHDLHEQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +VL I + +E + EE++ + + ++
Sbjct: 352 EEAELRTKTNLVLEAIVKAEGLEASPEELEEEVKNLAASYNMEIDQVRSLVND-----QM 406
Query: 412 LRAPIFEDKVIDHILKS 428
L + I K + I+ S
Sbjct: 407 LASDITMKKAMSLIVDS 423
>gi|331266985|ref|YP_004326615.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Streptococcus oralis Uo5]
gi|326683657|emb|CBZ01275.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Streptococcus oralis Uo5]
Length = 427
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 75/441 (17%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKTLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 EALYQDAMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEGAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ ++ +++ E + ++
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLDELKEKYRKELTAAKEEAYKDALEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +E+E+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEQEIQKEIEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|307328457|ref|ZP_07607632.1| trigger factor [Streptomyces violaceusniger Tu 4113]
gi|306885869|gb|EFN16880.1| trigger factor [Streptomyces violaceusniger Tu 4113]
Length = 480
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 84/425 (19%), Positives = 170/425 (40%), Gaps = 21/425 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L S + + I + + GFR GK+P I +G+
Sbjct: 1 MKSAVENLNPTRVRLTVEVPFEELKPSLDAAYKKINQQVTVPGFRKGKIPARIIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E ++E + + + +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNEALPKFYTDAVNEGELNPLGQPEVDITE---------LKDNELLTFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P IEI + ++VT D EV ++++D+ + ++ + E + GD V +D
Sbjct: 112 IRPTIEIPDYSGIEVTVDAVEVSDEDLDKSVEQLRERFATTSPVERAAAEGDIVVIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
V+ +LED V + +GS +L E + GL+ G E F + GK+
Sbjct: 172 KVEGEVLEDGVATGVTYTIGSGELLDGIDEAVTGLEAG----GEATFASELKGGSAQGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + EV + +++D A F++ +R +++++ +F + + ++L
Sbjct: 228 AEVSVKVSEVKARELPELDDDFAQLASEFDTLEELRADSRKRLERSKKFEQATQAQEKVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
D + +PE L+E E N + Q D EE
Sbjct: 288 DALLELVEVPIPEKLLEEEINTRKHNLEHHQLGQMGLNLESYLQMQDKTAEEFDAELKEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ + T VL + K + V +EE+ L ++ + + + L
Sbjct: 348 AEKGIRTQFVLDELVNKEQLSVGQEELTEHLMRRAQSSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFE 418
+
Sbjct: 407 GEVAR 411
>gi|261337229|ref|ZP_05965113.1| trigger factor [Bifidobacterium gallicum DSM 20093]
gi|270277583|gb|EFA23437.1| trigger factor [Bifidobacterium gallicum DSM 20093]
Length = 457
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 72/464 (15%), Positives = 175/464 (37%), Gaps = 30/464 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L + + + E E+I + N+ GFR G VP + G
Sbjct: 1 MKISVRNLEPTKAKLTITVDNEEFEPYLQEAREEIAKQINVPGFRKGHVPAKIVDQRVGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E I++ + E + L ++ R +P I + E + V LK + +
Sbjct: 61 GAVAGEAINKAVPEFYSQALETKEIRPMAQPEIEVTE-----VPESADSDVKLKFTATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
PQ ++ D++ + + EV++ ++D+++ + + + ++ GD V +D
Sbjct: 116 RRPQFDLPELDEMTIEVEPVEVEDADVDKRLEALRQRFGTLVGVDRPAQEGDYVNIDLDA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ +++ V + +GS + E L GL ++ E D AG+K
Sbjct: 176 QIDGESVD--TQEGVSYEIGSGTMLDGIDEALEGLSADEETTFESTLT----GGDHAGEK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +++D A F++ ++ + ++ + +
Sbjct: 230 ATVKVKVNSVKTEELPELDDDFAQEASEFDTLDELKEEIRKAAAMDAKGRQATAARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
I VP+ ++E L+ + D+E + A++ +
Sbjct: 290 AKIEEGLEIPVPKGVLEQTVEEQLKSQ--------------PNADDETKKQVEEDAEKAL 335
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + EK ++EV++ ++ + L ++ + + + +
Sbjct: 336 RDQMVLDALAEKLDVEVSQSDVFNFLASIAQQYGMDPNQFIQAILSN-GQIGSAVQEVAR 394
Query: 419 DKVIDHILKSVQIVD--RKVTFDQLFDNSSESSPEKLLDKSSKV 460
K + ++ V + + E+ E + +
Sbjct: 395 SKGMLGGMRKVTFTSNGETLDLSDFLGSDDEADAEVAAVEEDET 438
>gi|295094049|emb|CBK83140.1| trigger factor [Coprococcus sp. ART55/1]
Length = 428
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 79/437 (18%), Positives = 172/437 (39%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +L + +P+ + +++ N+ GFR GKVP++ I+ +YG
Sbjct: 1 MSFTVEKLEHSMAKLTITVPAADFDKAMTAAYNKTKNRFNVPGFRKGKVPMAFIEKMYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + +I E P+ + A +P I + E D
Sbjct: 61 EVFYEDAANAMINEYYPKEAVASELEIASQPVIDVIEMG---------KGKDFVFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++ + + ++V + EV + E+ + + N V+ +++ D+VT+D+
Sbjct: 112 VKPEVTLGDYKGIEVEKIDVEVTDDEVLEDIKKEQLQNARKVLVEGRAAQLDDEVTLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V + +N + ++GS + LVG G+ E+ FPED+ ++LAGK
Sbjct: 172 GFVDGVPFDGGKGENYKLVLGSHSFIDTFEDQLVGKNIGEDVEVNVTFPEDYQAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I + +N++ A + G ++ + QKI + + ++
Sbjct: 232 PAVFKCKINSITESQLPELNDEFASEVGGCDTLDQYKEEVKQKILAKKNRDAANEKEAKV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHML 353
LD + T D+ ++ VE+ + + + + +E ++
Sbjct: 292 LDKVIENATMDIADAQVEDMQKRMKDEFAQTLQYQGISLEQYMQIVNVTEESLMERIKPD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ VL + + NIE T+EE+ L + ++ + + ++
Sbjct: 352 ALKRIQQRAVLEAVVKAENIEATDEEVDEELSKMAAQYQMKLEDIKGFMGDAE--KDSIK 409
Query: 414 APIFEDKVIDHILKSVQ 430
+ K ++ +
Sbjct: 410 KDVAVKKAAKLLVDESK 426
>gi|150388888|ref|YP_001318937.1| trigger factor [Alkaliphilus metalliredigens QYMF]
gi|166987583|sp|A6TM60|TIG_ALKMQ RecName: Full=Trigger factor; Short=TF
gi|149948750|gb|ABR47278.1| trigger factor [Alkaliphilus metalliredigens QYMF]
Length = 428
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 77/438 (17%), Positives = 192/438 (43%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M E K L +++ +++ + N+ ++S NI GFR GKVP ++ YG
Sbjct: 1 MSAEIMKKEDNKITLKIVVGADQFEVAINKAYNKMKSSFNIPGFRKGKVPRKLVEQRYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + L + + RP G I+ D++
Sbjct: 61 EVFFEDAMNIVLPDAYEGALQELNIDPIDRPEFDF---------GEIKKGEDVEFTAEVQ 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
++P+ + + ++V ++ V E+++ ++ ++ + N ++ + GD V +DY
Sbjct: 112 VMPEFTVEGYKGIEVEKNEYNVQEEDVQNELNKLTEQNARMIAVEDRPVQDGDMVVIDYK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V E + + +GS E L+G GD+ +++ FPE++ ++LAGK
Sbjct: 172 GFVGEDQFEGGTAEKQSLTIGSNQFIPGFEEQLIGASIGDEIKVKVTFPEEYHSEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + E+ ++++ A F++ + ++ S K+++ ++ Q+ + +
Sbjct: 232 EATFEVMVHEIKEKELPALDDEFAKDVSEFDTLAELKADLSTKLEESAKKRTEQEYRNNV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
++ ++N+ ++P +++E + N +L +++ ++ + +E+
Sbjct: 292 IEAVANQVELEIPNAVIERQINNMLLDFDYQLKYQGMTLESYYQMTGTKEEDLRGQMRED 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++R +VL I E IE TE ++ L + ++ K+ + + ++
Sbjct: 352 AEKRAKQQLVLDRISEMEKIEATETDVSEELERMATQYKQELDKLKSNLRD--QDYTSIK 409
Query: 414 APIFEDKVIDHILKSVQI 431
I K ID + ++ ++
Sbjct: 410 EGIIVRKTIDLLAENAKV 427
>gi|116627090|ref|YP_819709.1| trigger factor [Streptococcus thermophilus LMD-9]
gi|122268307|sp|Q03MQ9|TIG_STRTD RecName: Full=Trigger factor; Short=TF
gi|116100367|gb|ABJ65513.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Streptococcus thermophilus LMD-9]
Length = 427
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 84/441 (19%), Positives = 181/441 (41%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + + I +++ + ++ ++ N+ GFR G +P + +G+
Sbjct: 1 MSVSFENTATNRGVVTFTIGQDKIQPALDQAFNKVKKNLNVPGFRKGHIPRAVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ I+ +++ +P I + I D L
Sbjct: 61 EALYDDALNAILPAAYEAAIAELGLDVVAQPKIDVKS---------IGKGQDWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+V+ + EV ++E+D ++ KN VK+ +E GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVSVEVSKEVTDEEVDAKLENERKNLAELIVKDGAAEYGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + +N +GS + LVG K+GD+ E++ FPED+ DLAGK
Sbjct: 172 GSVDGVEFDGGKGENHSLELGSGQFIPGFEDQLVGAKSGDEVEVKVTFPEDYQATDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++LA ++ ++ ++++ E V+
Sbjct: 232 AAVFVTKVNEVKAKEVPALDDELAKDLDDEVDTLDELKAKYRKELEAAKEIAFDDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
LD ++P +VENE + + + + + E+ + Y
Sbjct: 292 ALDLAVENAEIVELPAEMVENEVHRAMNEFMGNLQRQGISPEMYFQITGTTQEDLRKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ +RV T +V+ + + T+EE+Q + + ++ +
Sbjct: 352 ADSDKRVKTNLVIEAVAAAEGFDATDEEIQKEINDLAAEYNMEVSQVSELLSP-----EM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I S ++
Sbjct: 407 LKHDIAMKKAVEVITSSAKVK 427
>gi|227509446|ref|ZP_03939495.1| trigger factor [Lactobacillus brevis subsp. gravesensis ATCC 27305]
gi|227191158|gb|EEI71225.1| trigger factor [Lactobacillus brevis subsp. gravesensis ATCC 27305]
Length = 445
Score = 181 bits (458), Expect = 3e-43, Method: Composition-based stats.
Identities = 82/472 (17%), Positives = 185/472 (39%), Gaps = 36/472 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EL I ++ + + + ++ + GFR GKVP + +YG+
Sbjct: 1 MSAKWEKKGTNDGELTFEIGTDSIKSGLDRAFKKNKNSIRVPGFRKGKVPRAIFNQMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + + + +P I + E ++ +
Sbjct: 61 EALYEDALNILLPDEYSKAVDEAKIEPVDQPKIDVESM---------EKGKPWVIKANVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ ++ L V + V +K+ID ++ + +N +KE ++ D V +D+
Sbjct: 112 VKPEVKLGNYQGLSVPKQNTRVYQKDIDAELEKKRQNEAELVLKEGKAAEKGDTVVIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD + S KN +GS + LVG K GD+ +++ FP+D+ KDL GK
Sbjct: 172 GTVDGKPFDGGSAKNHSLELGSNSFIPGFEDQLVGHKAGDEVDVKVTFPDDYQAKDLQGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I EV + +++D A +S ++ +K + R+ ++
Sbjct: 232 DAIFKTTIHEVKTKELPKLDDDFAKDVDEDVDSLDELKEKIKDDLKTQKKNEAREAIEDA 291
Query: 297 ILDYI-----SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
++ + + ++ + + L ++ + + Q + E+ + +
Sbjct: 292 AINQAVDNSEVKDIPQAMLDEDIQRQMDQYLAGMQQQGINQQMYFQLTGTKPEDLKKQFS 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+RRV T +VL I + I TE+++++ + ++ E +
Sbjct: 352 DGAERRVKTNLVLEAIVDAEKINPTEDDLKAEVKDLASQYGMKEDAVRSALTDD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETF 463
L+ I K ID I+ S + +++ EK
Sbjct: 407 LKHDIGIKKAIDLIVDSSK-------------QDAKAKEEKSDTDKKDSSEK 445
>gi|166031010|ref|ZP_02233839.1| hypothetical protein DORFOR_00691 [Dorea formicigenerans ATCC
27755]
gi|166029277|gb|EDR48034.1| hypothetical protein DORFOR_00691 [Dorea formicigenerans ATCC
27755]
Length = 428
Score = 181 bits (458), Expect = 3e-43, Method: Composition-based stats.
Identities = 77/436 (17%), Positives = 182/436 (41%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + ++ L + + ++K ++ GFR GKVP ++ +YG
Sbjct: 1 MSLQVEKLEKNMAKLTIEVSADELEKALQNAYKKQKNKISMPGFRKGKVPRQMVEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + +I + E + D + +P I I + IE
Sbjct: 61 DVFYEDAANALIPQAYSEAYDECDLQIVSQPEIDITQ---------IEKGKPFIFTALVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYT 178
P++ + + L+V + V +KE+D ++ E A N E + GD+V +D+
Sbjct: 112 TRPEVTLGEYKGLEVDKVSTRVTQKEVDAKIQEEAGKNARTVTVEGRPVKDGDEVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS + L+G++ + E++ FPE++ ++L GK
Sbjct: 172 GFVDGEAFEGGKGENYSLTIGSGTFIPGFEDQLIGVEAEKEVEVKVTFPEEYHAENLQGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ E+ ++++ A F++ + KIK+ + K + Q+
Sbjct: 232 DAVFKCTVHEIKEKELPEIDDEFAAEVSKFDTLDEYKADVKAKIKEEKAKEGKAKKEDQV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ T ++PE +++ + + + S + ++ ++
Sbjct: 292 IAKAIENATMEIPELMIKTQARQQMDNFAQNLMSQGLTMEQYAQFTGMTADKMMEQMLPS 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ + T +VL I + NIE+++E++ L + + +K+ + + +++
Sbjct: 352 AEKNIKTRLVLEAIAKAENIEISDEKIDEKLAEMAKSYDMEVEKLKELVGEAEKQ--QMK 409
Query: 414 APIFEDKVIDHILKSV 429
+ + ID ++++
Sbjct: 410 DDMAVQEAIDFLVENA 425
>gi|149012152|ref|ZP_01833261.1| trigger factor [Streptococcus pneumoniae SP19-BS75]
gi|147763754|gb|EDK70688.1| trigger factor [Streptococcus pneumoniae SP19-BS75]
Length = 427
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 EALYQDAMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEDRIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELATAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|309388893|gb|ADO76773.1| trigger factor [Halanaerobium praevalens DSM 2228]
Length = 426
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 87/435 (20%), Positives = 191/435 (43%), Gaps = 17/435 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ E K +L+V I S ++ ++ + + I GFR GK P I+ +G+
Sbjct: 1 MEVKKEVLEDNKVKLEVEIESKKVDEALEQAYRQVVKDVEIPGFRKGKAPRKLIEKRFGE 60
Query: 61 SILS-ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + +D +I + + + + D +P DI I +
Sbjct: 61 EVLHKDALDILIPQGYSQAVEEADIEPIAQP---------DIEDFYIAKGESANFTAIVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++E+ ++ DL + ++ V +EI +++ ++ + + E E GD +D+T
Sbjct: 112 VKPEVELGAYKDLGIEKEDAAVKAEEISQRLEQMQDKHSQLATAEREELEEGDYAIIDFT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD S + +GS + E L+G+K G++K +E FPED+ +LAG
Sbjct: 172 GYVDGEEFPGGSAEEYSLEIGSGNFIPGFEEQLIGMKVGEEKTVEVNFPEDYHADELAGA 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + +KE+ +N+D A +++ + ++ +++ E V + ++
Sbjct: 232 EASFDVLLKEIKVKEKPELNDDFAAEASDYDTIADLKVSIEEELAAQKEESVENNFREEL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN----VDSIDEEDLQYYHML 353
+ S + ++L++ + + + Q++ +S +++ + + +
Sbjct: 292 IKKASENAEVKMTDTLIDEQLDQMFQRLSQSISQQGMNAEDYLSYMGMDEAGWREQNRDT 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R +VL I E IEVT+EE+ + Q ++ + + L++L+
Sbjct: 352 AAERAKELLVLEAIAEVEEIEVTDEELDEEVNQIAEMHDQEPEQ-IKAILQMQGQLSQLK 410
Query: 414 APIFEDKVIDHILKS 428
I K ID ++++
Sbjct: 411 EDIKRQKAIDFLIEN 425
>gi|167766385|ref|ZP_02438438.1| hypothetical protein CLOSS21_00889 [Clostridium sp. SS2/1]
gi|167711976|gb|EDS22555.1| hypothetical protein CLOSS21_00889 [Clostridium sp. SS2/1]
Length = 426
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 85/437 (19%), Positives = 186/437 (42%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E ++ + + + +L ++ + + + N+ GFR GKVP I YG
Sbjct: 1 MSLQVENLEHNMAKVTIEVEAAKLDNAIKQAFNKKKGQFNVPGFRKGKVPFQLIAKEYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + +I + E + D RP I + + +E D ++
Sbjct: 61 EIFYEDAANILIPDAYAEAMKDTDLEIVSRPEIDVTQ---------LEKGKDFIFTATFA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++ + + ++V + V + EI+ ++ ++ + N +++ + GD +T+DY+
Sbjct: 112 LKPEVTLGDYKGIEVPKTRVTVKKDEIEEELKKVQEQNAREITIEDRAVKDGDILTIDYS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + ++ ++GS E LVG + +I FPE++ DLAGK
Sbjct: 172 GSVDGVKFEGGTAEDQTLVIGSGAFIPGFEEQLVGKNLNETADINVTFPEEYHAPDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A FE+ + +KI+ + + + +I
Sbjct: 232 DAVFTVTVKAIKEKELPELDDEFAAEVSEFETLEDYKADIKEKIRDRKKEAANTERENKI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY----HML 353
+D T D+PE+++E + + + +S + D Q +
Sbjct: 292 VDAAVEAATMDIPEAMIEEQVQQMTDEFAQRLSYQGLSMEQYLMFSGMDAQKFADDLKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I + +I +EE+ ++ L + G + +++ Q ++
Sbjct: 352 AVKRIETRLVLEAIAKAEDITASEEDFKAELEKMAGMYQMETEQLEKIIQ--GAQKDQMM 409
Query: 414 APIFEDKVIDHILKSVQ 430
I K +D ++ +
Sbjct: 410 DDIAVQKAVDFLVGEAK 426
>gi|317496813|ref|ZP_07955143.1| hypothetical protein HMPREF0996_00122 [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895825|gb|EFV17977.1| hypothetical protein HMPREF0996_00122 [Lachnospiraceae bacterium
5_1_63FAA]
Length = 426
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 86/437 (19%), Positives = 186/437 (42%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E ++ + + + +L D+ + + + N+ GFR GKVP I YG
Sbjct: 1 MSLQVENLEHNMAKVTIEVEAAKLDDAIKQAFNKKKGQFNVPGFRKGKVPFQLIAKEYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + +I + E + D RP I + + +E D ++
Sbjct: 61 EIFYEDAANILIPDAYAEAMKDTDLEIVSRPEIDVTQ---------LEKGKDFIFTATFA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++ + + ++V + V + EI+ ++ ++ + N +++ + GD +T+DY+
Sbjct: 112 LKPEVTLGDYKGIEVPKTRVTVKKDEIEEELKKVQEQNAREITIEDRAVKDGDILTIDYS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + ++ ++GS E LVG + +I FPE++ DLAGK
Sbjct: 172 GSVDGVKFEGGTAEDQTLVIGSGAFIPGFEEQLVGKNLNETADINVTFPEEYHAPDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A FE+ + +KI+ + + + +I
Sbjct: 232 DAVFTVTVKAIKEKELPELDDEFAAEVSEFETLEDYKADIKEKIRDRKKEAANTERENKI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY----HML 353
+D T D+PE+++E + + + +S + D Q +
Sbjct: 292 VDAAVEAATMDIPEAMIEEQVQQMTDEFAQRLSYQGLSMEQYLMFSGMDAQKFADDLKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I + +I +EE+ ++ L + G + +++ Q ++
Sbjct: 352 AVKRIETRLVLEAIAKAEDITASEEDFKAELEKMAGMYQMETEQLEKIIQ--GAQKDQMM 409
Query: 414 APIFEDKVIDHILKSVQ 430
I K +D ++ +
Sbjct: 410 DDIAVQKAVDFLVGEAK 426
>gi|313123478|ref|YP_004033737.1| trigger factor [Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|312280041|gb|ADQ60760.1| Trigger factor [Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 441
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 177/443 (39%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K + EL I + + S ++ + ++ + GFR G V YG+
Sbjct: 1 MSANWKTTGKTTGELSFEISQDEIKKSLDKAFDRVKKSLRVPGFRKGHVSRVIFNQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ + E + + +A +P I +++
Sbjct: 61 EALYEDALNFALPEAYSAAVKETGIKAVGQPQIVPVSMG---------KNKAWEMKAIVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + +++V + V +K+ID ++ + + N +K ++E GD VT+DY
Sbjct: 112 VEPEVELGQYTEIEVPKQNTRVYQKDIDAELTKRQEQNAEMVLKNDKAENGDTVTIDYVG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD V + S +N +GS + LVG G++ ++ FPED+ KDLAGK+
Sbjct: 172 TVDGVEFDGGSAQNYSLELGSNTFIPGFEDQLVGHGAGEEVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV + ++++ A E+ ++ ++K E + ++
Sbjct: 232 AHFATKIHEVKAKQLPELDDEFAKDVDDSVETLDELKEKIKAELKSEKEEAAKAAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ T ++P+ +++ + + L + +M Q +++
Sbjct: 292 ITTAVKNATVEEIPDVMIQEDVDNQLNQYLGDMQRQGIDPQTYFKLTNTTEDQLRSQLSA 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K E ++EE+ + + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIAAKEGFEASKEEIDAEIKDLADNYNMSEKAVRNALSD-----EML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
I K +D I S + V +
Sbjct: 407 AHDIIVRKAMDLITDSAKQVAKT 429
>gi|227512157|ref|ZP_03942206.1| trigger factor [Lactobacillus buchneri ATCC 11577]
gi|227524113|ref|ZP_03954162.1| trigger factor [Lactobacillus hilgardii ATCC 8290]
gi|227084551|gb|EEI19863.1| trigger factor [Lactobacillus buchneri ATCC 11577]
gi|227088744|gb|EEI24056.1| trigger factor [Lactobacillus hilgardii ATCC 8290]
Length = 445
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 82/472 (17%), Positives = 185/472 (39%), Gaps = 36/472 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EL I ++ + + + ++ + GFR GKVP + +YG+
Sbjct: 1 MSAKWEKKGTNDGELTFEIGTDSIKSGLDRAFKKNKNSIRVPGFRKGKVPRAIFNQMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + + + +P I + E ++ +
Sbjct: 61 EALYEDALNILLPDEYSKAVDEAKIEPVDQPKIDVESM---------EKGKPWVIKANVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ ++ L V + V +K+ID ++ + +N +KE ++ D V +D+
Sbjct: 112 VKPEVKLGNYQGLSVPKQNTRVYQKDIDAELEKKRQNEAELVLKEGKAAEKGDTVVIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD + S KN +GS + LVG K GD+ +++ FP+D+ KDL GK
Sbjct: 172 GTVDGKPFDGGSAKNHSLELGSNSFIPGFEDQLVGHKAGDEVDVKVTFPDDYQAKDLQGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I EV + +++D A +S ++ +K + R+ ++
Sbjct: 232 DAIFKTTIHEVKTKELPKLDDDFAKDVDEDVDSLDELKEKIKDDLKTQKKNEAREAIEDA 291
Query: 297 ILDYI-----SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
++ + + ++ + + L ++ + + Q + E+ + +
Sbjct: 292 AINQAVDNSEVKDIPQAMLDEDIQRQMDQYLAGMQQQGINQQMYFQLTGTKPEDLKKQFS 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+RRV T +VL I + I TE+++++ + ++ E +
Sbjct: 352 DGAERRVKTNLVLEAIVDAEKINPTEDDIKAEVKDLASQYGMKEDAVRSALTDD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETF 463
L+ I K ID I+ S + +++ EK
Sbjct: 407 LKHDIGIKKAIDLIVDSSK-------------QDAKAKEEKSDTDKKDSSEK 445
>gi|257068138|ref|YP_003154393.1| trigger factor [Brachybacterium faecium DSM 4810]
gi|256558956|gb|ACU84803.1| trigger factor [Brachybacterium faecium DSM 4810]
Length = 519
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 79/460 (17%), Positives = 191/460 (41%), Gaps = 27/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +L V +P + L + + I + I GFR GKVP ++ +G+
Sbjct: 1 MKTESEKLSPTRVKLTVEVPFDELKPAIEAATKKIADQVQIPGFRKGKVPSKLVEQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+IL E +++ + + + ++ + + RP + + +++ E +L + D
Sbjct: 61 PAILQEAVNDSLPDFYQQAAAEVELKPVGRPEVEV----AEVPGLDGEEEGNLVFTVEQD 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I + F +V + EVDE ++ ++ E+ + + +E GD V++D
Sbjct: 117 VRPEISLPDFSTYEVEIEEPEVDEDAVEVRLTELRERFGTLVGVDRPAEDGDFVSLDMIA 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D+ +E S + V + +G ++ E L GL + F + D AG++
Sbjct: 177 TIDDEEIE--SVEGVSYQIGEGNMLEGLDEALTGLSAEET----TTFASKLAGGDRAGEE 230
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + + V +++ A + F++ ++ ++ +E + +L
Sbjct: 231 AQVKVTAQSVKVRELPEADDEFAEMASEFDTIDELKDDLKKQAAADAEGNRVALARNALL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + VPE LVE+E L+ E + + ++ V
Sbjct: 291 EKLLEELEIPVPEQLVEDEILSHLENEGKEAG-------------DPHGEEIREDTEKAV 337
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+L I ++V + ++ + + Q ++ ++L + L ++ + +
Sbjct: 338 RAQFLLDEINGTREVQVDQSDLMNYMTQLSAQYGIEPNQLLQMLAQS-GQLEQIFSEVQR 396
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSS 458
K +D +L + + + L +++ + EK D+ S
Sbjct: 397 SKALDVVLADITVKNASGDVLDL-GLTADDAGEKAEDEPS 435
>gi|315657033|ref|ZP_07909918.1| trigger factor [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|315492425|gb|EFU82031.1| trigger factor [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 435
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 68/442 (15%), Positives = 172/442 (38%), Gaps = 27/442 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K +L + +P ++ ++ + NI GFR G VP ++S G+
Sbjct: 1 MKSTVENLNPTKVKLAIEVPYQEFKPEMDKVFKEYGKQVNIPGFRRGHVPARVLESYIGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ E ++ + E + + + +P + + D + DLK + +
Sbjct: 61 GAVIEEAVNHALPEYYGQAVQEHKIAPMGQPDVDVT----DTPNVEGAAGGDLKFTVEVE 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ F L + D + D K ++ ++ + + + E + D VT+D
Sbjct: 117 VRPEVKLPDFSQLSLEVDAIKDDPKALETELENLRRRFATLKTVERAVKQDDFVTLDLKS 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ ++ + G+ L E L GLK G+ K E + A
Sbjct: 177 EIDGKEVDSLNQTSYHV--GAGGLVEGLDEALKGLKAGETKTFETQLKSGPHGGETAQVT 234
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
V ++ ++V LP + + +++ + ++ ++ + + + + ++++
Sbjct: 235 VTVDSVKEQV---LPEADDEFAMMVSEYDTIADLKKELAENVDRQARATQAMAARDKLVE 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + F +P+ +++ L + E+D + ++ +
Sbjct: 292 KLREELEFPLPQGILDETVAAQL----------------GEDASEDDKKKAQEAVEQDLK 335
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
I+L + E+ + V+++E+ + Q + +L ++ N + I +
Sbjct: 336 VQIILDALAEERQMNVSQQELLEFVLQTAQAYGMDPSMLLQSAEQN-NRIPAFIQEIARN 394
Query: 420 KVIDHILKSVQIVDRKVTFDQL 441
K I L V + D L
Sbjct: 395 KSIAAALGEVTVKDTNGEVVDL 416
>gi|298346552|ref|YP_003719239.1| FKBP family peptidyl-prolyl cis-trans isomerase [Mobiluncus
curtisii ATCC 43063]
gi|298236613|gb|ADI67745.1| FKBP family peptidyl-prolyl cis-trans isomerase (trigger factor)
[Mobiluncus curtisii ATCC 43063]
Length = 435
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 68/442 (15%), Positives = 172/442 (38%), Gaps = 27/442 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K +L + +P ++ ++ + NI GFR G VP ++S G+
Sbjct: 1 MKSTVENLNPTKVKLAIEVPYQEFKPEMDKVFKEYGKQVNIPGFRRGHVPARVLESYIGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ E ++ + E + + + +P + + D + DLK + +
Sbjct: 61 GAVIEEAVNHALPEYYGQAVQEHKIAPMGQPDVDVT----DTPNVEGAAGGDLKFTVEVE 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ F L + D + D K ++ ++ + + + E + D VT+D
Sbjct: 117 VRPEVKLPDFSQLSLEVDAIKDDPKALETELENLRRRFATLKTVERAVKQDDFVTLDLKS 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ ++ + G+ L E L GLK G+ K E + A
Sbjct: 177 EIDGKEVDSLNQTSYHV--GAGGLVEGLDEALKGLKAGETKTFETQLKSGPHGGETAQVT 234
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
V ++ ++V LP + + +++ + ++ ++ + + + + ++++
Sbjct: 235 VTVDSVKEQV---LPEADDEFAMMVSEYDTIADLKKELAENVDRQARATQAMAARDKLVE 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + F +P+ +++ L + E+D + ++ +
Sbjct: 292 KLREELEFPLPQGILDETVAAQL----------------GEDASEDDKKKAQEAVEQDLK 335
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
I+L + E+ + V+++E+ + Q + +L ++ N + I +
Sbjct: 336 VQIILDALAEERQMNVSQQELLEFVLQTAQAYGMDPSMLLQSAEQN-NRIPAFIQEIARN 394
Query: 420 KVIDHILKSVQIVDRKVTFDQL 441
K I L V + D L
Sbjct: 395 KSIAAALGEVTVKDTNGEVVDL 416
>gi|163815267|ref|ZP_02206644.1| hypothetical protein COPEUT_01427 [Coprococcus eutactus ATCC 27759]
gi|158449462|gb|EDP26457.1| hypothetical protein COPEUT_01427 [Coprococcus eutactus ATCC 27759]
Length = 428
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 82/437 (18%), Positives = 182/437 (41%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +L + +P+ + + + + N+ GFR GKVP++ I+ +YG
Sbjct: 1 MSFTVEKLEHSMAKLTITVPAEEFDKAMVKAYNKTKGRFNVPGFRKGKVPMAFIEKMYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + +++I E P+ + A +P I + + IE DL
Sbjct: 61 AVFYEDAANDMINEYYPKEAVASELEIASQPVIDVTQ---------IEKGKDLIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++ + + ++V + EV ++E+ + + N V+ +++ D+VT+D+
Sbjct: 112 VKPEVTLGEYKGVEVEKINVEVTDEEVLEDIKKEQLQNARKVLVEGRPAKLEDEVTLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N + ++GS + LVG G+ E+ FPED+ +LAGK
Sbjct: 172 GFVDGVPFEGGKGENYKLVLGSHSFIDTFEDQLVGKNIGEDVEVNVTFPEDYQADELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I + +N++ A + G ++ + K+ + + +
Sbjct: 232 PAVFKCKINSITESQLPELNDEFASEVGGCDTLDQYKEEVKNKLVAKKTKDAANEKEVKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHML 353
+D + T D+ ++ VE+ + + + + K + ++E ++ +
Sbjct: 292 IDKVIENATMDIADAQVEDMQHRMRDEFAQNLQYQGIKLEQYMQIVNVTEDELMERFKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ VL + + NIE T+EE+ L + ++ + + +A ++
Sbjct: 352 ALKRIQQRAVLEAVVKAENIEATDEEVDEELTKMAEQYQMKLEDIKGFMGDAE--IASMK 409
Query: 414 APIFEDKVIDHILKSVQ 430
+ K I+ + +
Sbjct: 410 KDVAVKKAAQLIVDAAK 426
>gi|312866237|ref|ZP_07726456.1| trigger factor [Streptococcus downei F0415]
gi|311098210|gb|EFQ56435.1| trigger factor [Streptococcus downei F0415]
Length = 427
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 83/441 (18%), Positives = 177/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L I ++ + + ++ N+ GFR G +P + +G+
Sbjct: 1 MSVSFENTATNRGVLTFTISQEQIKPALDTAFNKVKKNLNVPGFRKGHMPRAVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ I+ L++ +P I ++ E D ++
Sbjct: 61 EALYEDALNAILPAAYEAALAESGLDVVAQPKIDVDSM---------EKGQDWSIKAKVV 111
Query: 120 ILPQIEISSFDDLQVTQ-DICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ + EV ++E+D ++ N +K+ +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDESKEVSDQEVDDKVERERNNLAELTIKDAAAENGDTVVIDFL 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD V + N +GS E LVG K GD+ E++ FP D+ +DLAGK
Sbjct: 172 GTVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGAKAGDEVEVKVTFPADYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV S ++++LA E+ ++ ++++ E V+
Sbjct: 232 DAVFATKVHEVKSKEVPDLDDELAKDIDEEVETLDELKAKYRKELEAAKEIAYDDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
++ ++PE +V +E + + + M + +E+ + Y
Sbjct: 292 AIEKAVENAEIVELPEEMVHDEVHRTMNEFLSNMQRQGISPEMYYQLTGTTEEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + T+EE++ + + ++
Sbjct: 352 ADADKRVRTNLVIEAIAAAEGFDATDEEIEKEITDLATEYNMPADQVRSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K I+ I S ++
Sbjct: 407 LKHDITMKKAIEAITSSAKVK 427
>gi|256850969|ref|ZP_05556358.1| trigger factor [Lactobacillus jensenii 27-2-CHN]
gi|260661183|ref|ZP_05862097.1| trigger factor [Lactobacillus jensenii 115-3-CHN]
gi|282934116|ref|ZP_06339394.1| trigger factor [Lactobacillus jensenii 208-1]
gi|256616031|gb|EEU21219.1| trigger factor [Lactobacillus jensenii 27-2-CHN]
gi|260548120|gb|EEX24096.1| trigger factor [Lactobacillus jensenii 115-3-CHN]
gi|281301730|gb|EFA93996.1| trigger factor [Lactobacillus jensenii 208-1]
Length = 437
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 78/443 (17%), Positives = 175/443 (39%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EL I + ++ ++ + GFR G V YG+
Sbjct: 1 MSAKWEKTGKTTGELTFEISQEEIKLGLDQAFNRVKKNLRVPGFRKGHVSRVIFNQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + A +P I + D ++ +
Sbjct: 61 EALYEDALNLVLPNAYTAAVKEAKIEAVGQPKIEPVSMDKD---------KAWTMKATVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + ++V + V +K+ID ++ + + N +K+ ++ GD VT+DY
Sbjct: 112 VKPEVELGDYKGIEVPKQNTRVYQKDIDAELEKKREQNAELVLKDDKAAKGDTVTIDYKG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D + S +N +GS + L G K GD+ ++ FPED+ KDLAGK+
Sbjct: 172 TIDGKAFDGGSAENYSLELGSNTFIPGFEDQLEGHKAGDEVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV S ++++ A E+ ++ +++K+ E + ++
Sbjct: 232 AHFATKLHEVKSKELPKLDDEFAKDVDDSVETLDELKEKIKKQLKEDKEAAAQDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ ++P+++++ + + L + M Q +++
Sbjct: 292 ITTAVKNAKIDEIPDAMIQEDVDTQLNQYLGNMQRQGIDPQTYFKLTNTTEQQLRAQLST 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K +++ ++E++ + + EK + + L
Sbjct: 352 DAAERVKTNLVLEAIVAKEDLKADKKEIEQEIKDLAAEYNMDEKTVRNTLTDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
I K ++ I S + V +
Sbjct: 407 SHDIAVRKAMNLITDSAKQVGKA 429
>gi|169834028|ref|YP_001693908.1| trigger factor [Streptococcus pneumoniae Hungary19A-6]
gi|238688317|sp|B1I9J5|TIG_STRPI RecName: Full=Trigger factor; Short=TF
gi|168996530|gb|ACA37142.1| trigger factor [Streptococcus pneumoniae Hungary19A-6]
Length = 427
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAQFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|149023688|ref|ZP_01836168.1| trigger factor [Streptococcus pneumoniae SP23-BS72]
gi|225858254|ref|YP_002739764.1| trigger factor [Streptococcus pneumoniae 70585]
gi|254789022|sp|C1C5D8|TIG_STRP7 RecName: Full=Trigger factor; Short=TF
gi|147929625|gb|EDK80617.1| trigger factor [Streptococcus pneumoniae SP23-BS72]
gi|225721902|gb|ACO17756.1| trigger factor [Streptococcus pneumoniae 70585]
gi|301793643|emb|CBW36028.1| trigger factor (prolyl isomerase) [Streptococcus pneumoniae INV104]
Length = 427
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELATAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|225853976|ref|YP_002735488.1| trigger factor [Streptococcus pneumoniae JJA]
gi|254789025|sp|C1CCG7|TIG_STRZJ RecName: Full=Trigger factor; Short=TF
gi|225722900|gb|ACO18753.1| trigger factor [Streptococcus pneumoniae JJA]
Length = 427
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|210615407|ref|ZP_03290534.1| hypothetical protein CLONEX_02750 [Clostridium nexile DSM 1787]
gi|210150256|gb|EEA81265.1| hypothetical protein CLONEX_02750 [Clostridium nexile DSM 1787]
Length = 428
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 83/436 (19%), Positives = 178/436 (40%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + L + R+K ++ GFR GKVP I+ +YG
Sbjct: 1 MSLQVENMEKNMAKLTIEVSAEELEKAIQGAYLKQRNKISVPGFRKGKVPRQMIEKMYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + +I + + + +P + + + +E
Sbjct: 61 GIFYEDAANALIPTAYGKAYDECELDIVSQPKVEVVQ---------LEKGKPFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++ + + L V + V KEID ++ E K N V++ + GD+V +D+
Sbjct: 112 VKPEVTLGEYKGLSVDKVSNRVTAKEIDAKLEEEQKKNARTVVVEDRAVQDGDEVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N +GS E L+G + + E+ FPE++ +DLAGK
Sbjct: 172 GFVDGVAFEGGKGENYPLTIGSGSFIPGFEEQLIGAEAEKEVEVNVTFPEEYHSEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ E+ + ++++ A F++ A + KIK+ +K + Q
Sbjct: 232 AAVFKCTVHEIKAKELPELDDEFAAEVSEFDTLDAYKADIKAKIKEQKIADGNRKKEDQA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
++ T ++PE++++ + N + Q + + E ++
Sbjct: 292 VEKAVANATMEIPEAMIDTQVNQMAQDFAQRIQQQGLSMEQYFQFTGMTAESMMEELRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I + NIE+T+E + L + + +K+ + + +++
Sbjct: 352 AVKRIETRLVLEAIAKAENIEITDERIDEELAKMAEAYKMEVEKLKEFMGENE--KEQMK 409
Query: 414 APIFEDKVIDHILKSV 429
+ + ++ +
Sbjct: 410 MDLAVQDAVTFLVDNA 425
>gi|15902406|ref|NP_357956.1| trigger factor [Streptococcus pneumoniae R6]
gi|116516755|ref|YP_815875.1| trigger factor [Streptococcus pneumoniae D39]
gi|148988153|ref|ZP_01819616.1| trigger factor [Streptococcus pneumoniae SP6-BS73]
gi|41018219|sp|Q8DR29|TIG_STRR6 RecName: Full=Trigger factor; Short=TF
gi|122279239|sp|Q04M73|TIG_STRP2 RecName: Full=Trigger factor; Short=TF
gi|15457921|gb|AAK99166.1| Trigger factor [Streptococcus pneumoniae R6]
gi|116077331|gb|ABJ55051.1| trigger factor [Streptococcus pneumoniae D39]
gi|147926617|gb|EDK77690.1| trigger factor [Streptococcus pneumoniae SP6-BS73]
Length = 427
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 EALYQDAMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEETYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|315655109|ref|ZP_07908011.1| trigger factor [Mobiluncus curtisii ATCC 51333]
gi|315490590|gb|EFU80213.1| trigger factor [Mobiluncus curtisii ATCC 51333]
Length = 435
Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats.
Identities = 68/442 (15%), Positives = 172/442 (38%), Gaps = 27/442 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K +L + +P ++ ++ + NI GFR G VP ++S G+
Sbjct: 1 MKSTVENLNPTKVKLAIEVPYQEFKPEMDKVFKEYGKQVNIPGFRRGHVPARVLESYIGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ E ++ + E + + + +P + + D + DLK + +
Sbjct: 61 GAVIEEAVNHALPEYYGQAVQEHKIAPMGQPDVDVT----DTPNVEGAAGGDLKFTVEVE 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ F L + D + D K ++ ++ + + + E + D VT+D
Sbjct: 117 VRPEVKLPDFSQLSLEVDAIKDDPKALETELENLRRRFATLKTVERAVKQDDFVTLDLKS 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ ++ + G+ L E L GLK G+ K E + A
Sbjct: 177 EIDGKEVDSLNQTSYHV--GAGGLVEGLDEALKGLKAGETKTFETQLKSGPHGGETAQVT 234
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
V ++ ++V LP + + +++ + ++ ++ + + + + ++++
Sbjct: 235 VTVDSVKEQV---LPEADDEFAMMVSEYDTIAELKKELAENVDRQARATQAMAARDKLVE 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + F +P+ +++ L + E+D + ++ +
Sbjct: 292 KLREELEFPLPQGILDETVAAQL----------------GEDASEDDKKKAQEAVEQDLK 335
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
I+L + E+ + V+++E+ + Q + +L ++ N + I +
Sbjct: 336 VQIILDALAEERQMNVSQQELLEFVLQTAQAYGMDPSMLLQSAEQN-NRIPAFIQEIARN 394
Query: 420 KVIDHILKSVQIVDRKVTFDQL 441
K I L V + D L
Sbjct: 395 KSIAAALGEVTVKDANGDVVDL 416
>gi|312277553|gb|ADQ62210.1| Trigger factor [Streptococcus thermophilus ND03]
Length = 427
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 83/441 (18%), Positives = 180/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + + I +++ + ++ ++ N+ GFR G +P + +G+
Sbjct: 1 MSVSFENTATNRGVVTFTIGQDKIQPALDQAFNKVKKNLNVPGFRKGHIPRAVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ I+ +++ +P I + I D L
Sbjct: 61 EALYDDALNAILPAAYEAAIAELGLDVVAQPKIDVKS---------IGKGQDWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ L+V+ + EV ++E+D ++ KN VK+ +E GD V +D+
Sbjct: 112 TKPEVKLGAYKYLEVSVEVSKEVTDEEVDAKLENERKNLAELIVKDGAAEYGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + +N +GS + LVG K+GD+ E++ FPED+ DLAGK
Sbjct: 172 GSVDGVEFDGGKGENHSLELGSGQFIPGFEDQLVGAKSGDEVEVKVTFPEDYQATDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++LA ++ ++ ++++ E V+
Sbjct: 232 AAVFVTKVNEVKAKEVPALDDELAKDLDDEVDTLDELKAKYRKELEAAKEIAFDDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
LD ++P +VENE + + + + + E+ + Y
Sbjct: 292 ALDLAVENAEIVELPAEMVENEVHRAMNEFMGNLQRQGISPEMYFQITGTTQEDLRKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ +RV T +V+ + + T+EE+Q + + ++ +
Sbjct: 352 ADSDKRVKTNLVIEAVAAAEGFDATDEEIQKEINDLAAEYNMEVSQVSELLSP-----EM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I S ++
Sbjct: 407 LKHDIAMKKAVEVITSSAKVK 427
>gi|307126614|ref|YP_003878645.1| trigger factor [Streptococcus pneumoniae 670-6B]
gi|306483676|gb|ADM90545.1| trigger factor [Streptococcus pneumoniae 670-6B]
Length = 427
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 EALYQDAMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELATAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|297544141|ref|YP_003676443.1| trigger factor [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
gi|296841916|gb|ADH60432.1| trigger factor [Thermoanaerobacter mathranii subsp. mathranii str.
A3]
Length = 432
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 86/442 (19%), Positives = 192/442 (43%), Gaps = 18/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K E +++ IPS + + N + SK N+ GFR GK P ++ YG+
Sbjct: 1 MGVSLKKLEKSVATIELTIPSEKFEEGLNFAFKKNASKFNVPGFRRGKAPRVIVERYYGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ + E E L + + P I I + I DL L +
Sbjct: 61 GVLYEDAVEYVFDEAYNEALKTFNLQPVDYPHIHILQ---------IGKGKDLILEATVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYT 178
++P++E+ + +++ + +V + +++ ++ ++ + N E +E GD +D+
Sbjct: 112 VMPEVELGEYKGIEIEKIEYDVYDGDVEYELEKLRQQNARIVPVEGRAAERGDIAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D+ E +N Q +GS + ++G + + FPED+ +++L GK
Sbjct: 172 GFIDDKPFEGGKAENYQLELGSNTFIPGFEDQIIGHNVNENFNVNVTFPEDYRVEELRGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A FE+ ++ +K+++ + ++K +
Sbjct: 232 SAAFKVTLKALNKKELPELDDEFAKDVSEFETIDELKADIRKKLEERNRQQAENEMKEKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+ + D+P+ +VE + + L+++ + + + E+ +
Sbjct: 292 VMKVVENAKVDIPDVMVERQIDASLRELDYNLRYQGLDLDRYLSITGKTLEDLRKEMWEG 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A RV T +V+ I + NIE TEEE+++ L + + + ++ + + ++
Sbjct: 352 ALNRVKTQLVIDKIAKIENIEATEEELENKLKEMAANYRINLEEFKKSL--TESQINSIK 409
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I K ID I +I+ ++
Sbjct: 410 EDIAYYKTIDFIFSQCKIISKE 431
>gi|304389730|ref|ZP_07371689.1| trigger factor [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|304326906|gb|EFL94145.1| trigger factor [Mobiluncus curtisii subsp. curtisii ATCC 35241]
Length = 435
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 68/442 (15%), Positives = 171/442 (38%), Gaps = 27/442 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K +L + +P ++ ++ + NI GFR G VP ++S G+
Sbjct: 1 MKSTVENLNPTKVKLAIEVPYQEFKPEMDKVFKEYGKQVNIPGFRRGHVPARVLESYIGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ E ++ + E + + + +P + + D + DLK + +
Sbjct: 61 GAVIEEAVNHALPEYYGQAVQEHKIAPMGQPDVDVT----DTPNVEGAAGGDLKFTVEVE 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ F L + D + D K ++ ++ + + + E + D VT+D
Sbjct: 117 VRPEVKLPDFSQLSLEVDAIKDDPKALETELENLRRRFATLKTVERAVKQDDFVTLDLKS 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ + + G+ L E L GLK G+ K E + A
Sbjct: 177 EIDGKEVDSLKQTSYHV--GAGGLVEGLDEALKGLKAGETKTFETQLKSGPHGGETAQVT 234
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
V ++ ++V LP + + +++ + ++ ++ + + + + ++++
Sbjct: 235 VTVDSVKEQV---LPEADDEFAMMVSEYDTIAELKKELAENVDRQARATQAMAARDKLVE 291
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + F +P+ +++ L + E+D + ++ +
Sbjct: 292 KLREELEFPLPQGILDETVAAQL----------------GEDASEDDKKKAQEAVEQDLK 335
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
I+L + E+ + V+++E+ + Q + +L ++ N + I +
Sbjct: 336 VQIILDALAEERQMNVSQQELLEFVLQTAQAYGMDPSMLLQSAEQN-NRIPAFIQEIARN 394
Query: 420 KVIDHILKSVQIVDRKVTFDQL 441
K I L V + D L
Sbjct: 395 KSIAAALGEVTVKDTNGEVVDL 416
>gi|291559216|emb|CBL38016.1| trigger factor [butyrate-producing bacterium SSC/2]
Length = 426
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 84/437 (19%), Positives = 185/437 (42%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E ++ + + + +L ++ + + + N+ GFR GKVP I YG
Sbjct: 1 MSLQVENLEHNMAKVTIEVEAAKLDNAIKQAFNKKKGQFNVPGFRKGKVPFQLIAKEYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + +I + E + D RP I + + +E D ++
Sbjct: 61 EIFYEDAANILIPDAYAEAMKDTDLEIVSRPEIDVTQ---------LEKGKDFIFTATFA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++ + + ++V + V + EI+ ++ ++ + N +++ + GD +T+DY+
Sbjct: 112 LKPEVTLGDYKGIEVPKTRVTVKKDEIEEELKKVQEQNAREITIEDRAVKDGDILTIDYS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E + ++ ++GS E LVG + +I FPE++ DLAGK
Sbjct: 172 GSVDGVKFEGGTAEDQTLVIGSGAFIPGFEEQLVGKNLNETADINVTFPEEYHAPDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A FE+ + +KI+ + + + +I
Sbjct: 232 DAVFTVTVKAIKEKELPELDDEFAAEVSEFETLEDYKADIKEKIRDRKKEAANTERENKI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY----HML 353
+D T D+PE+++E + + + +S + D Q +
Sbjct: 292 VDAAVEAATMDIPEAMIEEQVQQMTDEFAQRLSYQGLSMEQYLMFSGMDAQKFADDLKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T + L I + +I +EE+ ++ L + G + +++ Q ++
Sbjct: 352 AVKRIETRLALEAIAKAEDITASEEDFKAELEKMAGMYQMETEQLEKIIQ--GAQKDQMM 409
Query: 414 APIFEDKVIDHILKSVQ 430
I K +D ++ +
Sbjct: 410 DDIAVQKAVDFLVGEAK 426
>gi|148993941|ref|ZP_01823311.1| trigger factor [Streptococcus pneumoniae SP9-BS68]
gi|149003495|ref|ZP_01828369.1| trigger factor [Streptococcus pneumoniae SP14-BS69]
gi|149008011|ref|ZP_01831568.1| trigger factor [Streptococcus pneumoniae SP18-BS74]
gi|168488091|ref|ZP_02712290.1| trigger factor [Streptococcus pneumoniae SP195]
gi|168494563|ref|ZP_02718706.1| trigger factor [Streptococcus pneumoniae CDC3059-06]
gi|182683369|ref|YP_001835116.1| trigger factor [Streptococcus pneumoniae CGSP14]
gi|225856129|ref|YP_002737640.1| trigger factor [Streptococcus pneumoniae P1031]
gi|303255381|ref|ZP_07341447.1| trigger factor [Streptococcus pneumoniae BS455]
gi|303259479|ref|ZP_07345456.1| trigger factor [Streptococcus pneumoniae SP-BS293]
gi|303262341|ref|ZP_07348284.1| trigger factor [Streptococcus pneumoniae SP14-BS292]
gi|303264760|ref|ZP_07350677.1| trigger factor [Streptococcus pneumoniae BS397]
gi|303266598|ref|ZP_07352483.1| trigger factor [Streptococcus pneumoniae BS457]
gi|303268831|ref|ZP_07354618.1| trigger factor [Streptococcus pneumoniae BS458]
gi|238691128|sp|B2ILU5|TIG_STRPS RecName: Full=Trigger factor; Short=TF
gi|254789026|sp|C1CIQ2|TIG_STRZP RecName: Full=Trigger factor; Short=TF
gi|147758431|gb|EDK65430.1| trigger factor [Streptococcus pneumoniae SP14-BS69]
gi|147760523|gb|EDK67499.1| trigger factor [Streptococcus pneumoniae SP18-BS74]
gi|147927530|gb|EDK78557.1| trigger factor [Streptococcus pneumoniae SP9-BS68]
gi|182628703|gb|ACB89651.1| trigger factor [Streptococcus pneumoniae CGSP14]
gi|183572980|gb|EDT93508.1| trigger factor [Streptococcus pneumoniae SP195]
gi|183575504|gb|EDT96032.1| trigger factor [Streptococcus pneumoniae CDC3059-06]
gi|225724766|gb|ACO20618.1| trigger factor [Streptococcus pneumoniae P1031]
gi|301801313|emb|CBW33996.1| trigger factor (prolyl isomerase) [Streptococcus pneumoniae INV200]
gi|302597626|gb|EFL64706.1| trigger factor [Streptococcus pneumoniae BS455]
gi|302636440|gb|EFL66932.1| trigger factor [Streptococcus pneumoniae SP14-BS292]
gi|302639413|gb|EFL69871.1| trigger factor [Streptococcus pneumoniae SP-BS293]
gi|302641612|gb|EFL71972.1| trigger factor [Streptococcus pneumoniae BS458]
gi|302643842|gb|EFL74104.1| trigger factor [Streptococcus pneumoniae BS457]
gi|302645627|gb|EFL75857.1| trigger factor [Streptococcus pneumoniae BS397]
gi|332075245|gb|EGI85715.1| trigger factor [Streptococcus pneumoniae GA17570]
gi|332076843|gb|EGI87305.1| trigger factor [Streptococcus pneumoniae GA17545]
Length = 427
Score = 180 bits (455), Expect = 5e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVIAAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|332202309|gb|EGJ16378.1| trigger factor [Streptococcus pneumoniae GA41317]
Length = 427
Score = 180 bits (455), Expect = 6e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 EALYQDAMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVIAAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELATAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|332077683|gb|EGI88144.1| trigger factor [Streptococcus pneumoniae GA41301]
Length = 427
Score = 180 bits (455), Expect = 6e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQVQSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|332703910|ref|ZP_08423998.1| Trigger factor [Desulfovibrio africanus str. Walvis Bay]
gi|332554059|gb|EGJ51103.1| Trigger factor [Desulfovibrio africanus str. Walvis Bay]
Length = 439
Score = 180 bits (455), Expect = 6e-43, Method: Composition-based stats.
Identities = 77/437 (17%), Positives = 180/437 (41%), Gaps = 12/437 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + ++R++ V +P+ T + R A++KGFR GKVP +++ Y K
Sbjct: 1 MEYKVEEISPVERKIQVSVPAEEATSAILATTALYRRDADVKGFRKGKVPTDMVEARYRK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E ++I + +IL++ + +G I D +S+++
Sbjct: 61 QIFDEATTDLINLHINQILTELKLVPMS---------GLKVDAGQIVKGEDFSYSVSFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
P++++ + ++ Q+ EV + E+ + I ++ EV+E V
Sbjct: 112 APRLDLPEYKGRKIEQESVEVKDDEVQAVVERIRESLAEVAEVEEPREAKDGDVVTVSFA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++ E N Q +G ++++GLK +Q+ FP D + LAGK
Sbjct: 172 ALAGGEFEGLKADNFQLELGKGQALEGFEQLIIGLKPDEQRTGMISFPADFINEKLAGKS 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + + ++LA + FES MR ++ + L + + +++
Sbjct: 232 TEVRVHLHSIKEKRLPEMTDELAKKAGKFESVDKMREAITESYTKSRTQLNKSVAQNKLI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +P SLVE ++ + R + + +++ EE + A++
Sbjct: 292 EQLMEGMEIPLPPSLVEKNIGYMVSERRERLERRGKSLESLGKSMEELQAEFKPEAEKMA 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T + L + + V +E+++ + Q + + + + + + + +++ I
Sbjct: 352 RTQVFLLAVATAEGLTVDPQEVEAVIRQAAAQSGQEYENLRE-YHERTGLIHDIKDRILA 410
Query: 419 DKVIDHILKSVQIVDRK 435
DK + I ++ ++ +
Sbjct: 411 DKASELIYETSEVTEVP 427
>gi|302534407|ref|ZP_07286749.1| trigger factor [Streptomyces sp. C]
gi|302443302|gb|EFL15118.1| trigger factor [Streptomyces sp. C]
Length = 459
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 77/425 (18%), Positives = 170/425 (40%), Gaps = 21/425 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L V +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLTVEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPNRVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ D +P + I E ++ LK D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEADLNPLGQPEVDITE---------LKDNELLKFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IEI + ++V D EV ++++++ + ++ + + E + GD VT+D
Sbjct: 112 VRPEIEIPDYSGIEVEVDAVEVSDEDVEKSVEQLRGRFASTKDVERAAAEGDVVTIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +L D +V + +GS +L E + GL+ G E F GK
Sbjct: 172 KVDGEVLADGVATDVSYTIGSGELLDGIDEAVKGLEAG----GEATFTSQLKGGSAEGKD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +V + ++++ A + F++ ++ ++++ ++ + + ++L
Sbjct: 228 AEVTVKVTKVSARELPELDDEFAQMASEFDTLDELKADSRKRLENMKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
+ + +PE L+ +E + + + EE
Sbjct: 288 EKLLELVEVPIPEKLLADEVQTRKHNLEHHQLGQMGLNLEKFLEIQGKTVEEFDAETSEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T VL + K + V +EE+ L ++ + + + L
Sbjct: 348 AVKGIKTQFVLDALVNKEKLGVNQEELTEHLMRRAQSSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFE 418
+
Sbjct: 407 GEVAR 411
>gi|325684387|gb|EGD26556.1| trigger factor [Lactobacillus delbrueckii subsp. lactis DSM 20072]
Length = 441
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 85/443 (19%), Positives = 176/443 (39%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K + EL I + + S ++ + ++ + GFR G V YG+
Sbjct: 1 MSANWKTTGKTTGELSFEISQDEIKKSLDKAFDRVKKSLRVPGFRKGHVSRVIFNQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ + E + + +A +P I +++
Sbjct: 61 EALYEDALNFALPEAYSAAVKETGIKAVGQPQIVPVSMG---------KNKAWEMKAIVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + +++V + V +K+ID ++ + + N +K ++E GD VT+DY
Sbjct: 112 VEPEVELGQYTEIEVPKQNTRVYQKDIDAELTKRQEQNAEMVLKNDKAENGDTVTIDYVG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD V + S +N +GS + LVG G++ ++ FPED+ KDLAGK+
Sbjct: 172 TVDGVEFDGGSAQNYSLELGSNTFIPGFEDQLVGHGAGEEVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV + ++++ A E+ ++ ++K E + ++
Sbjct: 232 AHFATKIHEVKAKQLPELDDEFAKDVDDSVETLDELKEKIKAELKSEKEEAAKAAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ T ++P+ +++ + + + +M Q +++
Sbjct: 292 ITTAVKNATVEEIPDVMIQEDVDNQFNQYLGDMQRQGIDPQTYFKLTNTTEDQLRSQLSA 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K E ++EE+ + + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIAAKEGFEASKEEIDAEIKDLADNYNMSEKAVRNALSD-----EML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
I K +D I S + V +
Sbjct: 407 AHDIIVRKAMDLITDSAKQVAKA 429
>gi|148996804|ref|ZP_01824522.1| trigger factor [Streptococcus pneumoniae SP11-BS70]
gi|168576880|ref|ZP_02722730.1| trigger factor [Streptococcus pneumoniae MLV-016]
gi|225860424|ref|YP_002741933.1| trigger factor [Streptococcus pneumoniae Taiwan19F-14]
gi|237650382|ref|ZP_04524634.1| trigger factor [Streptococcus pneumoniae CCRI 1974]
gi|237822070|ref|ZP_04597915.1| trigger factor [Streptococcus pneumoniae CCRI 1974M2]
gi|298229681|ref|ZP_06963362.1| trigger factor [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254635|ref|ZP_06978221.1| trigger factor [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298502194|ref|YP_003724134.1| cell division trigger factor [Streptococcus pneumoniae TCH8431/19A]
gi|307067048|ref|YP_003876014.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Streptococcus
pneumoniae AP200]
gi|254789027|sp|C1CPR1|TIG_STRZT RecName: Full=Trigger factor; Short=TF
gi|147757379|gb|EDK64418.1| trigger factor [Streptococcus pneumoniae SP11-BS70]
gi|183577499|gb|EDT98027.1| trigger factor [Streptococcus pneumoniae MLV-016]
gi|225728308|gb|ACO24159.1| trigger factor [Streptococcus pneumoniae Taiwan19F-14]
gi|298237789|gb|ADI68920.1| cell division trigger factor [Streptococcus pneumoniae TCH8431/19A]
gi|306408585|gb|ADM84012.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Streptococcus pneumoniae AP200]
gi|327390810|gb|EGE89150.1| trigger factor [Streptococcus pneumoniae GA04375]
Length = 427
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVIAAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAEDGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|168482637|ref|ZP_02707589.1| trigger factor [Streptococcus pneumoniae CDC1873-00]
gi|168485535|ref|ZP_02710043.1| trigger factor [Streptococcus pneumoniae CDC1087-00]
gi|194398157|ref|YP_002037082.1| trigger factor [Streptococcus pneumoniae G54]
gi|221231267|ref|YP_002510419.1| trigger factor (prolyl isomerase) [Streptococcus pneumoniae ATCC
700669]
gi|226738693|sp|B5E7E2|TIG_STRP4 RecName: Full=Trigger factor; Short=TF
gi|254789023|sp|B8ZLG8|TIG_STRPJ RecName: Full=Trigger factor; Short=TF
gi|172043765|gb|EDT51811.1| trigger factor [Streptococcus pneumoniae CDC1873-00]
gi|183571250|gb|EDT91778.1| trigger factor [Streptococcus pneumoniae CDC1087-00]
gi|194357824|gb|ACF56272.1| trigger factor [Streptococcus pneumoniae G54]
gi|220673727|emb|CAR68226.1| trigger factor (prolyl isomerase) [Streptococcus pneumoniae ATCC
700669]
gi|332203569|gb|EGJ17636.1| trigger factor [Streptococcus pneumoniae GA47368]
Length = 427
Score = 179 bits (454), Expect = 6e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVIAAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQVQSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|219683453|ref|YP_002469836.1| trigger factor [Bifidobacterium animalis subsp. lactis AD011]
gi|254788987|sp|B8DTD1|TIG_BIFA0 RecName: Full=Trigger factor; Short=TF
gi|219621103|gb|ACL29260.1| trigger factor [Bifidobacterium animalis subsp. lactis AD011]
Length = 461
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 63/423 (14%), Positives = 163/423 (38%), Gaps = 24/423 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L + + + + ++I + + GFR G VP + G
Sbjct: 1 MKISVRNLEPTKAKLTITVDQDEFDPYLEDARKEIAEQITVPGFRKGHVPGKLVDQRVGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +++ + ++ + L ++D R +P I + E LK + +
Sbjct: 61 GAVAGEAVNKALPDMYAKALDEKDIRPMDQPQIEVVEMPQSAADDT-----KLKFTATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P+ E+ + + L++ D EV + +++ ++ + + + ++ GD +D T
Sbjct: 116 RRPEFELPNLEGLEIAVDKAEVSDDDVNNRLGTLRQRFATLVGVDRPAQKGDFANIDLTA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D ++ S++ V + +GS + E L GL G++ E D G+K
Sbjct: 176 QTDGETVD--SQEGVSYEIGSGTMLDGLDEALEGLSAGEETTFESTL----EGGDHEGEK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + V + +++D A F++ ++ + I+ +E + +
Sbjct: 230 AQVKVKVNSVKAEELPELDDDFAQEASEFDTLDELKAEIRKNIEADAEGRQATIARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +P+ + N L+ + E A + + + +
Sbjct: 290 ETLEEGLDIPLPKGVRNNMVEQQLKSMGVEAGKA----------TSDQKKEAEEAVDKML 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + EK +++V++ ++ + L ++ + + + R +
Sbjct: 340 KDQMVLDALAEKLDVQVSQSDVFNFLGSIAQQYGMDPNMFIQALMRN-GQIGSARREVAR 398
Query: 419 DKV 421
+
Sbjct: 399 SRA 401
>gi|312898486|ref|ZP_07757876.1| trigger factor [Megasphaera micronuciformis F0359]
gi|310620405|gb|EFQ03975.1| trigger factor [Megasphaera micronuciformis F0359]
Length = 501
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 86/437 (19%), Positives = 187/437 (42%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + K L + + + ++++ ++ NI GFR GK P ++S GK
Sbjct: 19 MKVTVNEVDQHKVTLHIEVSAEDAAKGAAAAVKNLANRVNIPGFRKGKAPRMVLESFLGK 78
Query: 61 SILSETIDEII-KEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E I E++ + + L ++ P DI E D +
Sbjct: 79 DAVKEEIFEVVASKAYNDALQEQGITPVTDP---------DINRICDEKGKDFVFEATLT 129
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDY 177
P++++ + ++ ++ EV ++++ +++ + K + + E GD +D+
Sbjct: 130 KKPEVKLGEYKGIKAAKEAVEVTDEDVAKELVNLQKTHAKMAPAPEGAKVEDGDYAVIDF 189
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
++D V E K +GS E L+GLK GD K+++ FPED+ KDLAG
Sbjct: 190 KGTIDGVAFEGGEGKAYPLQIGSGSFIPGFEEQLIGLKAGDSKDVKVPFPEDYFQKDLAG 249
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ +++++ V+ D A + F++ ++ ++++ ++F + +
Sbjct: 250 KEAVFAVTVQDIKRSELPPVDADFAELVGKFKTVDELKADVRGRLEKSAKFKATEAFNNE 309
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML--- 353
+L + + D+PE +VE + + ++++ ++ + N + ++D + +
Sbjct: 310 VLKKAIDNASVDIPEVMVEQKVDQMVEEFELKLQAQNMHLHDYLEYTKQDEKDFRAQYLD 369
Query: 354 -AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
AK V +VL I +IEV E ++Q+ + F +++ K + L
Sbjct: 370 AAKENVKMDLVLEAIANAEHIEVKELDLQAEIITMARNFGADPQEVYKIIMK-ERRIPML 428
Query: 413 RAPIFEDKVIDHILKSV 429
+ K IL +
Sbjct: 429 VQSVGRKKAAGFILSNA 445
>gi|317968358|ref|ZP_07969748.1| trigger factor [Synechococcus sp. CB0205]
Length = 482
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 73/439 (16%), Positives = 182/439 (41%), Gaps = 18/439 (4%)
Query: 10 GLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SILSETID 68
G + +++ +P R S N +E + + GFR GKVP + + G I + ++
Sbjct: 27 GSRMAIEIAVPGERTQGSHNAAVEKLSRSVKLPGFRKGKVPRAVLMQQIGPLQIRATALE 86
Query: 69 EIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISS 128
++ + + L + + A +P++ G + E +L L L D+ P ++ S
Sbjct: 87 SLVDSVFKDALKQAEIPAIGQPALD---GGFESLLERFEPGQELTLTLEMDVEPTPKLKS 143
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDYTVSVDNVI 185
L+ + D +D + + + E + + ++ T S +
Sbjct: 144 TKGLKAEAESVSFDPARVDELIEQSRRQMATLVPVEGRAAAAGDVAVLSFKGTYSDNGEA 203
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+E S ++ + + E ++G+K GD K I+ FPED++ +D AG+K + +
Sbjct: 204 IEGGSGDAMEVELEEGRMIPGFVEGVIGMKAGDSKTIKCEFPEDYAQEDAAGRKASFDIT 263
Query: 246 IKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNK 304
+ E+ S +++ A + E+ + +R ++K+ +E + +L + +
Sbjct: 264 LSELKSRELPALDDAFAQQASDKETLAELRSDLETRLKEDAERRHQSNRHDALLAALVEQ 323
Query: 305 YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLAKRRVLTGI 362
++PE+LV+ E +L++ +++ + + + + + A+ R+ +
Sbjct: 324 LEVELPETLVQEEIVTLLEQTAGQLAQQGMDVKKLFTPQLIQSLRESSRPEAEERLKRSL 383
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE-LRAPIFEDKV 421
L + +E+ E+ + + + F + PN L + ++ + +K+
Sbjct: 384 ALKALAAAEKLELEASEIDAKVKELSRGFSDSSRI-------DPNRLRQAVQEDLMREKL 436
Query: 422 IDHILKSVQIVDRKVTFDQ 440
+ + + + ++ +
Sbjct: 437 LGWLESNSTVTEKAAEASE 455
>gi|331003802|ref|ZP_08327294.1| trigger factor tig [Lachnospiraceae oral taxon 107 str. F0167]
gi|330411994|gb|EGG91391.1| trigger factor tig [Lachnospiraceae oral taxon 107 str. F0167]
Length = 428
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 78/439 (17%), Positives = 175/439 (39%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M V + E +L V + + + + + +++ N+ GFR G V + +YG
Sbjct: 1 MSVEVQKLEKNMAKLTVTVEAKEFDKAIADSFKKNKNRFNVPGFRKGHVTQEVFEKMYGS 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ID + P + RP I I + D
Sbjct: 61 DNLIPDAIDFSLDATYPGAAKESGLEIVSRPQINIKNA---------KKGEDFVYEALIA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYT 178
+ P++ + + ++V + V++ +I + + N E E GD +++D+
Sbjct: 112 VRPEVTLGEYKGIEVAKADEVVNDDDIASALKSEQEKNARLITVEGRPVEKGDNISLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V ++ ++GS + ++G G+ + FPE++ +KDLAGK
Sbjct: 172 GSIDGVPFNGGKGEDYPLVIGSGAFIPGFEDQIIGHNAGEDFNVNITFPENYQMKDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+KE+ +++D A FE+ + + +++ + + + I
Sbjct: 232 AAVFACKVKEIRKKELPELDDDFAGEISEFETMAEYKEDLKKQLAEAKAKRAATENENAI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ----YYHML 353
+D + T D+P+ +++ + G++ M S I + +
Sbjct: 292 VDKLIETSTMDIPDPMIDAQVEGLVADYGRRMQSQGISLDQYLQITGMTREDLNNQFKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +++ T +VL + + NI TE E++ L + + K+ F + ++
Sbjct: 352 ALKQIKTRLVLEEVAKAENITATEAEIEEELQKIADSYKMELDKIKGFFGENE--RKQMS 409
Query: 414 APIFEDKVIDHILKSVQIV 432
+ K ID ++++ ++V
Sbjct: 410 EDLAVQKAIDFLVENAKLV 428
>gi|315226602|ref|ZP_07868390.1| trigger factor [Parascardovia denticolens DSM 10105]
gi|315120734|gb|EFT83866.1| trigger factor [Parascardovia denticolens DSM 10105]
Length = 455
Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats.
Identities = 74/476 (15%), Positives = 187/476 (39%), Gaps = 26/476 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K+ L V + L ++ ++I ++ NI GFR G VP I+ +G
Sbjct: 1 MKITMRNVEPTKKVLTVTVDQEELEPYMDKARKEIANQVNIPGFRKGHVPGKLIEQRFGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ E +++ + + + + +R R +P I + + E LK +
Sbjct: 61 GAVIGEAVNDAVPDFYNKAIEERKLRPMDQPKIDVKD-----VPESHEDDKKLKFTAEVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ FD ++V+ V ++++D+++ + + + ++ GD +++
Sbjct: 116 VRPEVKLPKFDAMEVSIPEQAVTDEDVDKRLNNLRQRFGTLVSVDRPAKKGDFASINLDT 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S++ + + VGS + S E L GL G+ + F + G+K
Sbjct: 176 QIDGKSVD--SQEGISYEVGSGAMLSGLDEALDGLSAGE----DTTFSSTLEGGEHEGEK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++ V ++++ A F++ ++ ++ + ++ + + +
Sbjct: 230 AEVKLTLNSVKEEQLPELDDEFAKDASEFDTLDELKADIRKQSEVDAQARQATEARDAFM 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
I +P+ ++E L+ + ++ +E + A++ +
Sbjct: 290 AQIEEAEEIPIPKGVLERTVTEHLRSM---------GVEDPKKATKEQEKEAKDSAEKEL 340
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
IVL T+ E N++VT+ ++ + L ++ + + L +
Sbjct: 341 RDQIVLDTVAESLNVQVTQADVTNFLASIAQQYGMDPTNFITSIVQN-GQLNSAVQEVAR 399
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + ++ V D + V Q + E + S E
Sbjct: 400 SKGMIEAMRQVTFKDPAGKVVDLGQFLGSDEEEEEASVAAASQAAAVADEVSKSEE 455
>gi|225389282|ref|ZP_03759006.1| hypothetical protein CLOSTASPAR_03028 [Clostridium asparagiforme
DSM 15981]
gi|225044661|gb|EEG54907.1| hypothetical protein CLOSTASPAR_03028 [Clostridium asparagiforme
DSM 15981]
Length = 428
Score = 179 bits (454), Expect = 8e-43, Method: Composition-based stats.
Identities = 78/439 (17%), Positives = 187/439 (42%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L V +P+ + + + +++ NI GFR GK P + I+ +YG
Sbjct: 1 MSLQVEKLEKNMAKLTVEVPAEQFEKAIKKAFNKNKNRFNIPGFRKGKAPQAMIEKMYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + DE I E + + + + RP+I+I + IE +
Sbjct: 61 GVFYEDAADEAINETYADAMKESELDIVSRPAISIEQ---------IEKGQPFIYTATVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++ + + L+V + V ++I+ ++ ++ + N V++ GD+V +D+
Sbjct: 112 VKPEVTLGEYKGLEVEKADMTVKAEDIEAELKKVQEQNARLLTVEDRPVADGDQVVIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + ++ +GS E L+G G++ E+ FP ++ +LA K
Sbjct: 172 GYVDGKAFDGGKAEDYSLTIGSHSFIDTFEEQLIGKNIGEECEVNVTFPAEYHAAELANK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KE+ +N++ A FE+ + K+ + + + + ++
Sbjct: 232 PATFKVTVKEIKVKEIPELNDEFAGEVSEFETLDEYKKDIEAKLSEKKQKEAATENENRV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ----NVDSIDEEDLQYYHML 353
++ + T ++PE +++ + +LQ M S + ++ +
Sbjct: 292 VEKVVAGATMEIPEPMIDGQVENMLQDTARRMQSQGLNLELYLKYTGMTLDQMKEQMRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL + ++ NIEV++E + + + + K+ ++ +++
Sbjct: 352 AVKRIETRLVLEEVVKQENIEVSDERLDEEIVKMAAAYQMESDKLKEYM--SEQDKKQMK 409
Query: 414 APIFEDKVIDHILKSVQIV 432
+ + +D ++ ++V
Sbjct: 410 EDLAVQEAVDFLVAEAKLV 428
>gi|168490687|ref|ZP_02714830.1| trigger factor [Streptococcus pneumoniae CDC0288-04]
gi|183574866|gb|EDT95394.1| trigger factor [Streptococcus pneumoniae CDC0288-04]
Length = 427
Score = 179 bits (454), Expect = 8e-43, Method: Composition-based stats.
Identities = 78/441 (17%), Positives = 177/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ S+++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYSKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|254443410|ref|ZP_05056886.1| trigger factor [Verrucomicrobiae bacterium DG1235]
gi|198257718|gb|EDY82026.1| trigger factor [Verrucomicrobiae bacterium DG1235]
Length = 434
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 87/442 (19%), Positives = 184/442 (41%), Gaps = 18/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + ++ L V ++ + ++ +A I GFRPGK P++ I+ +GK
Sbjct: 1 MKIDIQDVNDTRKTLAVSFEASEIATEEAAILKQFSKEAKIPGFRPGKAPVNMIRQRFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +I + + D+ I D +L+ + D+
Sbjct: 61 QIAGELRQRVISKGYQDGTKDAGLDLI---------NVVDLGDVEIAAGSDAELKFTVDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ EIS + ++ V EV + +++ + I F E E+ GD V + +
Sbjct: 112 RPKFEISDYKEISVKGLSEEVSDADVEEAIDRIRTERAEFSPVEREASKGDYVKFSHEGT 171
Query: 181 VDNVILEDQSKKNVQF---------IVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
+D + + + + + I L ++ L GLKTGD+KEIE FP D +
Sbjct: 172 IDGQAISEIAPEKPVYAKMPQTWEEIGSEHGLIPGLSDGLEGLKTGDKKEIEVEFPADFT 231
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ 291
++ L GKK ++EV ++ + G ES + ++ +K R
Sbjct: 232 VEALQGKKAVYAVEVQEVRERKLPELDEEFCKAQGVESVDEFKERVTEMVKGKKSQDRRA 291
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
++RQ+ + I+ K +PESLV+ E +++V + ++ E+
Sbjct: 292 DIRRQVTEAIAGKIEIPLPESLVDYETEMAMRQVVQNNVRKGVSQEKLEESKEQIHAEAR 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A V ++L I EK +I++++E+ + + + ++ + + +
Sbjct: 352 GAAAEAVKLQLILTQIAEKEDIKISDEDFSRFIMNRAYQSGQKPDAIVKELRADQDQVRR 411
Query: 412 LRAPIFEDKVIDHILKSVQIVD 433
+++ + DK ++ ++ ++ +
Sbjct: 412 IQSSLLYDKTLEFLVDQAKVSE 433
>gi|294501429|ref|YP_003565129.1| trigger factor [Bacillus megaterium QM B1551]
gi|294351366|gb|ADE71695.1| trigger factor [Bacillus megaterium QM B1551]
Length = 428
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 187/438 (42%), Gaps = 21/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V + + + ++ + + N+ GFR GK+P + +G
Sbjct: 1 MSAKWEKQEGNQGVLTVEVEAAEFDKALDKAFTKVVKQVNVPGFRKGKMPRPLFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D ++ E + + RP I + IE L
Sbjct: 61 ESLYQDALDILLPEAYSNAIVEAGIEPVDRPEIDVET---------IEKGQPLVFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYT 178
+ P++++ + +L+V + V +++++ ++ + + + VKE + GD +D+
Sbjct: 112 VKPEVKLGEYKNLEVEKVDTTVTDEDVESELKTLQERHAELVVKEEGTVAEGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E LVGL+ G +KE+E FPE++ ++LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLEIGSNTFIPGFEEQLVGLEVGAEKEVEVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ S ++++ A E+ A++ +K++ E ++
Sbjct: 232 AAKFKVKLHEIKSKELPALDDEFAKDVDEEVETLEALKAKTKEKLQSDKENQAESALRDT 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+++ + ++PE++ E + ++Q+ + Q ++
Sbjct: 292 LVEKAAENAEVEIPEAMFNTEMDRMMQEFEQRLQMQGLNLELYFQFSGQDEKALRDQMRP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I + N+EV+EEE++ L G + +++ +L +
Sbjct: 352 DAEKRVKINLTLEAISKAENLEVSEEEVEKELENMAGMYNMPVEEIKKVL----GSLDSI 407
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ + K ++ ++++ +
Sbjct: 408 KEDMKVRKAVEFLVENSK 425
>gi|309805718|ref|ZP_07699758.1| trigger factor [Lactobacillus iners LactinV 09V1-c]
gi|309807956|ref|ZP_07701884.1| trigger factor [Lactobacillus iners LactinV 01V1-a]
gi|329921342|ref|ZP_08277780.1| trigger factor [Lactobacillus iners SPIN 1401G]
gi|308164971|gb|EFO67214.1| trigger factor [Lactobacillus iners LactinV 09V1-c]
gi|308168807|gb|EFO70897.1| trigger factor [Lactobacillus iners LactinV 01V1-a]
gi|328934634|gb|EGG31138.1| trigger factor [Lactobacillus iners SPIN 1401G]
Length = 442
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 89/455 (19%), Positives = 175/455 (38%), Gaps = 22/455 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EL I + ++ + + ++ + GFR G V YG+
Sbjct: 1 MSAKWEKTGKTTGELTFEISTEEISKGLDIAFKRVKKNLRVPGFRKGHVSRVVFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ +++ +P I E +
Sbjct: 61 EALYEDAVNAVLPVAYANAIAESKAEVVGQPKIMPVSM---------EKGKAWTFKAIVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P++++ + ++V + V K++D ++ + + N +K+ +S GD VT+DY
Sbjct: 112 TKPEVKLGDYKGVEVPKQNKRVLVKDVDAELKKRQEQNAELVLKDGKSAEGDTVTIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD E S KN +GS + L+ GD ++ FPED+S KDLAGK+
Sbjct: 172 TVDGTKFEGGSAKNYSLELGSKTFIPGFEDQLLNHTAGDGVDVVVTFPEDYSAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ES ++ +K+ E ++
Sbjct: 232 AHFATKIHEVKSKHLPKIDDEFAKDIDDSVESLDELKEKIKADLKKQKEEAAEDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ N + ++PE+++ + + L++ M + +E+ Q
Sbjct: 292 VKEAVNNASVDEIPEAMINEDVDNQLKQYLGGMQRQGIDPKTYFKLTGTTEEQLRQQLAT 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I NIEVT EE+ + + EK + L
Sbjct: 352 DAPERVKTNLVLEAIVSAENIEVTAEEINQEIKNLATDYNMDEKVVRRTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ I K I+ ++ + + V +K + S+
Sbjct: 407 KHDISIRKAINLVVDNAKEVAKKSSTKTATSEDSD 441
>gi|291563766|emb|CBL42582.1| trigger factor [butyrate-producing bacterium SS3/4]
Length = 429
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 92/440 (20%), Positives = 190/440 (43%), Gaps = 18/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + +P+ + ++ + K NI GFR GK P + IK +YG
Sbjct: 1 MSVQVENLEKNTAKLTIEVPAEKFEEAVQHSYNKNKGKFNIPGFRKGKAPFNMIKKMYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +DE+I P+ + RPSI+I E IE
Sbjct: 61 GVFYEDAVDEVIDASYPDAAKESGLEIVSRPSISIEE---------IEEGKAFVYTAVVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++ + + ++V + EV E++I+ ++ + N V++ E GD+VT+D+
Sbjct: 112 VKPEVTLGEYKGVEVQKTKSEVTEEDIETEIKRAREKNSRLITVEDRGIEDGDQVTIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E ++ +GS E L+G TG++ E+ FP ++ +++L K
Sbjct: 172 GSVDGKRFEGGKAEDYPLTIGSHTFIDNFEEQLIGKTTGEECEVNVTFPAEYHVEELKNK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+KE+ N+D A F++ + ++K++ + + ++
Sbjct: 232 PAVFKVKVKEIQRKELPEANDDFASEVSDFDTMEEYKKDLTEKLQAEKIEAAKTADEDKV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ + T ++P+ +VE + NG++ + S + I E+ +
Sbjct: 292 VAKVIENATMEIPDQMVEEQVNGMVNDYARRLESQGISFKQYVEITGMTAEKIGEQMKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL + + NI+ + ++ + F ++++ F + +A+L+
Sbjct: 352 AIKRIQTRLVLEAVVKAENIQADDAAVEEQFDKMAEDFKMDKEQIKGMFGE--EQIAQLK 409
Query: 414 APIFEDKVIDHILKSVQIVD 433
+ K ID ++ + VD
Sbjct: 410 EDLAVQKAIDFLVAEAKFVD 429
>gi|302874444|ref|YP_003843077.1| trigger factor [Clostridium cellulovorans 743B]
gi|307690949|ref|ZP_07633395.1| trigger factor [Clostridium cellulovorans 743B]
gi|302577301|gb|ADL51313.1| trigger factor [Clostridium cellulovorans 743B]
Length = 430
Score = 179 bits (453), Expect = 8e-43, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 197/441 (44%), Gaps = 19/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E ++ V + + + TD+ + + + NI GFR GK PL IK +YG
Sbjct: 1 MNATVEKIEKNTAKITVTVEAEKFTDALKKVYQKNVKQFNIPGFRKGKAPLHLIKKMYGD 60
Query: 61 SILS-ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I E + +I +P IL + + RA RP ++I + E + +
Sbjct: 61 QIFYPEAEEMVINTTLPGILVENNVRAVDRPEVSIEQS---------EEGKEFTYTATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+P++E+ + + V + E++I+ ++ + + N K + + +D+
Sbjct: 112 TMPEVELGDYKGVTVEKVEKVATEEDIEAELKTMQEKNARVSSKAEGTIENGNIAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + +N + +GS + L+GL GD K++ FPE++ ++L GK
Sbjct: 172 GFIAGAPFQGGKGENYELTIGSHSFIDTFEDQLIGLNKGDAKDVVVTFPENYGNEELNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ ++ ++++ A FE+ ++ +K+ +++E + + + + +
Sbjct: 232 EATFKVTVNDIKVKELPALDDEFAKEVSEFETLEDLKADIKKKMDEYNEHMAKHEFQEKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+D T ++P+ +V+NE N +++ + + + + +S + Y
Sbjct: 292 VDAAVANTTIEIPQVMVDNEINNMMRDLENRLKAQGLDLDTYFKFTNSNEANVRDYMKET 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPG-HEKKMLDHFQKYPNALAEL 412
A++RV T +V+ I + +++V++EE+++ + ++ ++ + +
Sbjct: 352 AEKRVKTELVMAQIAKVEDVQVSDEEVEAKAREMAAQWGTPDVEETVKMIL--GMQKEYI 409
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ KVI+ I+++ ++ +
Sbjct: 410 TYDLVNQKVINIIVENAKVAE 430
>gi|303248987|ref|ZP_07335233.1| trigger factor [Desulfovibrio fructosovorans JJ]
gi|302489636|gb|EFL49574.1| trigger factor [Desulfovibrio fructosovorans JJ]
Length = 444
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 89/440 (20%), Positives = 181/440 (41%), Gaps = 13/440 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ +K +++V +P+ + + RSKA+IKGFR GKVP S I+S + K
Sbjct: 1 MEYNVNQISPVKTQVNVTVPAEEADAALATAVALYRSKADIKGFRKGKVPASVIESRFKK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I +E ++I + EI+ + D++ ++ L+ +++
Sbjct: 61 EITAEATTDLINVHINEIMGELKLSPLS---------GLDVSDAALQKGESLEYTFTFEH 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD--KVTVDYT 178
P ++ + + ++ + + EID + + KN + D V+V +
Sbjct: 112 APAFDLPEYKGQAIEEEEVVIGDAEIDAVVERVRKNLAEVKPIADARPAMDGEVVSVTFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + +N + +G E ++ + G++ E FP D DLAG+
Sbjct: 172 AFENGEPIPGVRAENFELSLGEGQALPEFEALIKTIPAGEEGSSEMTFPADFINTDLAGR 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + ++ + L V+++LA + FE+ MR + K+ E L R ++++
Sbjct: 232 TVLMKVAVHVIKERLLPEVDDELAKKAGNFENLDKMREAITMSYKKSREDLHRSSAQKKL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + + F +PES+VE + + + ++ + V E+ A+
Sbjct: 292 LDNLLAQVEFPLPESVVEQQLSSMADDFVQKLERQGKSLAGVGKTMEDLEAELKPKAEEL 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V T I L + K + V+ +EM + Y+ + +L + + + +R +
Sbjct: 352 VKTQIFLAAVAAKEELSVSPQEMDAFFYRLSTQTGQDVV-LLKRYYEDNGLMILVRDKLL 410
Query: 418 EDKVIDHILKSVQIVDRKVT 437
DK D I + + T
Sbjct: 411 ADKAADFIYANALVTKVPAT 430
>gi|15900319|ref|NP_344923.1| trigger factor [Streptococcus pneumoniae TIGR4]
gi|111656960|ref|ZP_01407773.1| hypothetical protein SpneT_02001806 [Streptococcus pneumoniae
TIGR4]
gi|21264078|sp|Q97SG9|TIG_STRPN RecName: Full=Trigger factor; Short=TF
gi|14971868|gb|AAK74563.1| trigger factor [Streptococcus pneumoniae TIGR4]
Length = 427
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 78/441 (17%), Positives = 177/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 EALYQDAMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ S+++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYSKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|307704251|ref|ZP_07641170.1| trigger factor [Streptococcus mitis SK597]
gi|307622162|gb|EFO01180.1| trigger factor [Streptococcus mitis SK597]
Length = 427
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 172/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ ++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLAELKEKYRNELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQVQSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|332204427|gb|EGJ18492.1| trigger factor [Streptococcus pneumoniae GA47901]
Length = 427
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVIAAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFENQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|300768257|ref|ZP_07078162.1| trigger factor [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308180931|ref|YP_003925059.1| trigger factor [Lactobacillus plantarum subsp. plantarum ST-III]
gi|300494321|gb|EFK29484.1| trigger factor [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308046422|gb|ADN98965.1| trigger factor [Lactobacillus plantarum subsp. plantarum ST-III]
Length = 440
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 78/449 (17%), Positives = 186/449 (41%), Gaps = 23/449 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EG + EL I ++++++ ++ + + N+ GFR GKVP +YG+
Sbjct: 1 MAAKWEKKEGNQGELTFEIGADKISEGIDKAFQRTKKNLNVPGFRKGKVPRQIFNQMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E E + + + +P I ++ E L+
Sbjct: 61 EALYQDALNIVLPEAYEEAIKETEIEPVDQPQIDVDSM---------EKGKPWVLKAVVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++++ + +L VT+ V K++D ++ + ++ + GD V +D+
Sbjct: 112 VKPEVKLGQYKELSVTRQNTRVYAKDVDAELESRREKQAELVLKEDQPAAKGDTVVIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS + LVG+K GD+ E++ FP+D+ +DL K
Sbjct: 172 GFVDGEPFEGGESENYSLELGSNSFIPGFEDQLVGVKAGDETEVKVTFPKDYQAEDLQNK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++ A ++ ++ ++K+ E ++ +
Sbjct: 232 EATFKVTVHEVKTKELPELDDEFAKDVDEDVDTLEELKAKIKDELKEQKESAAHDAIEDE 291
Query: 297 ILDYISNKYTFD-VPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
L+ + +P+++ E++ + + + M + +++ + +
Sbjct: 292 ALNQAVDNAEIQAIPDAMKEDDIHRQMDQYLANMQQQGIDPKTYYKLTGTTEDDLHKQFA 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+RRV T +VL + E NI+ +++E+ + + ++ E +
Sbjct: 352 ADAERRVKTNLVLEAVVEAENIKPSQDEIAAEVKDLASQYNMEESAVRGALTDD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
L I + +D I S + +
Sbjct: 407 LSHDIAIRQAVDLIADSAKQNAKAEDKKD 435
>gi|291543929|emb|CBL17038.1| trigger factor [Ruminococcus sp. 18P13]
Length = 440
Score = 179 bits (453), Expect = 9e-43, Method: Composition-based stats.
Identities = 69/435 (15%), Positives = 166/435 (38%), Gaps = 21/435 (4%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI- 62
+ + +EL I ++ D+ + + + ++GFR GK P ++ +YG+ +
Sbjct: 5 SSEKIDVNTQELTFEISADVFEDAVEKTYQKQKKNITLQGFRKGKAPRKMVEKIYGEGVF 64
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
+ I+ ++ + + + RP + + + + ++ + P
Sbjct: 65 YEDAINSLLGPELGNAIEETKLVLVDRPKVEVTSISKE---------NGIVIKATCITKP 115
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSV 181
++ + + ++ + + +V + EI+ Q+ + + N + + GD+V +D+ +
Sbjct: 116 EVTVPEYKGIKAPKKVKDVTDDEINAQIDVLRQRNARIVSVDDRPVQNGDEVNMDFEGFI 175
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V + + +GS + LVG G++ EI FPE++ + DLAGK
Sbjct: 176 DGVAFDGGKGEGFPLTIGSGQFIPGFEDQLVGHSIGEEFEINVTFPEEYQMPDLAGKPAT 235
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
I + ++D A F++ R + +++++E + + D
Sbjct: 236 FKIKINSISVKELPAFDDDFAKDTSDFDTAEEFRADMKKHMEENAEKSAASAFENYVFDT 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLAKR 356
+ +P + E+ + ++Q + Q + + A+
Sbjct: 296 LIKNTEAVIPNVMFEHRIDTLIQNFEQSLQQQGMSLDIYLQYTGMTMDAFRDTFEERAQN 355
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V + L I E NI+VTEEE+ L + + + + + + +
Sbjct: 356 EVKLRLALEKIAEMENIQVTEEEINEGLAPLVAQSGLELEAIKSRIP-----MEDYIVDL 410
Query: 417 FEDKVIDHILKSVQI 431
K D + ++ +
Sbjct: 411 KVGKAADLVKEAAVV 425
>gi|269795732|ref|YP_003315187.1| trigger factor [Sanguibacter keddieii DSM 10542]
gi|269097917|gb|ACZ22353.1| trigger factor [Sanguibacter keddieii DSM 10542]
Length = 469
Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats.
Identities = 74/450 (16%), Positives = 167/450 (37%), Gaps = 31/450 (6%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+ + + K +L V + + L S + + I + ++ GFR GKVP I G+
Sbjct: 7 KSAVETLDPTKVKLTVEVEYDELKPSIDHAYKHIAEQVSVPGFRKGKVPARIIDQRVGRG 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L I+E + + +S+ D R +P + + + L +L ++
Sbjct: 67 AVLEHAINESLSGFYRQAVSETDIRPLGQPDVQVVK-----VPELESEGGELHFTAEVEV 121
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ ++VT D EV + ++D ++ + + + + GD V +D +
Sbjct: 122 RPEVELPELSSIKVTVDDVEVSDDDVDGRLESLRERFGTLVGVDRPAAEGDFVVIDLKAT 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V + +++ S V + +GS ++ E L GL + F + + G+
Sbjct: 182 VGDEEVDNVSG--VSYQIGSGNMLEGLDEALTGLSADET----TTFVAPLAGGEHEGQDA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ V V+++ A F++ ++ ++ + + R +L
Sbjct: 236 SISVVATAVKQRDLPEVDDEFAQLASEFDTIDELKADLREQAAG-VKQSNQAVQARDLLL 294
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+P ++E E L+ D+E + +
Sbjct: 295 EQLTTSEVPLPAGVIEAEVVRHLEG-------------EGRLEDDEHRAEVTEQTQVALK 341
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
IVL + EK I+V + E+ L ++ + + + + +
Sbjct: 342 NQIVLDILAEKLEIKVAQNELLDYLVNASRQYGMDPNTFIKTIDEN-GQIPAMVGEVARS 400
Query: 420 KVIDHILKSVQIVD---RKVTFDQLFDNSS 446
K + L+ V++VD + V + +
Sbjct: 401 KALAVALRQVEVVDGAGKAVDLSEFIGSDE 430
>gi|259500685|ref|ZP_05743587.1| trigger factor [Lactobacillus iners DSM 13335]
gi|302191375|ref|ZP_07267629.1| trigger factor [Lactobacillus iners AB-1]
gi|309804167|ref|ZP_07698245.1| trigger factor [Lactobacillus iners LactinV 11V1-d]
gi|312871426|ref|ZP_07731521.1| trigger factor [Lactobacillus iners LEAF 3008A-a]
gi|312872373|ref|ZP_07732443.1| trigger factor [Lactobacillus iners LEAF 2062A-h1]
gi|315653480|ref|ZP_07906401.1| trigger factor [Lactobacillus iners ATCC 55195]
gi|259168069|gb|EEW52564.1| trigger factor [Lactobacillus iners DSM 13335]
gi|308163750|gb|EFO66019.1| trigger factor [Lactobacillus iners LactinV 11V1-d]
gi|311092196|gb|EFQ50570.1| trigger factor [Lactobacillus iners LEAF 2062A-h1]
gi|311093079|gb|EFQ51428.1| trigger factor [Lactobacillus iners LEAF 3008A-a]
gi|315489171|gb|EFU78812.1| trigger factor [Lactobacillus iners ATCC 55195]
Length = 442
Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats.
Identities = 89/455 (19%), Positives = 176/455 (38%), Gaps = 22/455 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EL I + ++ + + ++ + GFR G V YG+
Sbjct: 1 MSAKWEKTGKTTGELTFEISTEEISKGLDIAFKRVKKNLRVPGFRKGHVSRVVFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ +++ +P I E +
Sbjct: 61 EALYEDAVNAVLPVAYANAIAESKAEVVGQPKIMPVSM---------EKGKAWTFKAIVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P++++ + ++V + V K++D ++ + + N +K+ +S GD VT+DY
Sbjct: 112 TKPEVKLGDYKGVEVPKQNKRVLVKDVDAELKKRQEQNAELVLKDGKSAEGDTVTIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD E S KN +GS + L+ GD+ ++ FPED+S KDLAGK+
Sbjct: 172 TVDGTKFEGGSAKNYSLELGSKTFIPGFEDQLLNHTAGDEVDVVVTFPEDYSAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ES ++ +K+ E ++
Sbjct: 232 AHFATKIHEVKSKHLPKIDDEFAKDIDDSVESLDELKEKIKADLKKQKEEAAEDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ N + ++PE+++ + + L++ M + +E+ Q
Sbjct: 292 VKEAVNNASVDEIPEAMINEDVDNQLKQYLGGMQRQGIDPKTYFKLTGTTEEQLRQQLAT 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I NIEVT EE+ + + EK + L
Sbjct: 352 DAPERVKTNLVLEAIVSAENIEVTAEEINQEIKNLATDYNMDEKVVRRTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ I K I+ ++ + + V +K + S+
Sbjct: 407 KHDISIRKAINLVVDNAKEVAKKSSTKTATSEDSD 441
>gi|320103933|ref|YP_004179524.1| trigger factor [Isosphaera pallida ATCC 43644]
gi|319751215|gb|ADV62975.1| trigger factor [Isosphaera pallida ATCC 43644]
Length = 479
Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats.
Identities = 83/440 (18%), Positives = 174/440 (39%), Gaps = 11/440 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + ++ L V I + + + F + D A + GFRPGK P + ++ Y K
Sbjct: 28 MKVDITQAGPCRKHLKVEISAQDVEEEFGRALGDFSKTAIVPGFRPGKAPRTLVERRYRK 87
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + ++ + ++ + +P+I + + + L ++
Sbjct: 88 EVSGQVKGSLLMACMEQLDKEYKLNPISQPNIDP-------EAIQLPERGPMTFELEIEV 140
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ + L+V + E+ +++DRQ+ I + K+ +GD V TV
Sbjct: 141 PPEFELPDYTGLKVKRPTLEITAEDVDRQLRLIREERAQIVPKDGAVALGDLVVAKMTVE 200
Query: 181 VDNVILEDQSKKNVQFIVG---SADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ + + + + L L G K G+ + ++ + D
Sbjct: 201 LGDRDPIEIEEFEFRVRDDLRLQDALIPGIGATLEGAKVGESRTLDLQVAPSAGVPDAGA 260
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + +I ++ +P ++ A LGF S +R +++ E+ + ++R++
Sbjct: 261 QTGKATLTILDLKTPRLPDLDEAFAKSLGFASIGDLRDAARSALERQFEYRRNEFIRREV 320
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D I + FD+P LV+ + L + EM +A + + E H R
Sbjct: 321 MDQILKQCEFDLPPDLVKRQERLTLGRRIQEMRAAGLSEAEIKAGFAELKFNAHAATTRS 380
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ +L I E+ N EV+EEE++ + +++ +K L L I
Sbjct: 381 LQEYFILSKIAEQENFEVSEEELEQEIQAIAAASDESPRRVRARLEK-EGMLETLATQII 439
Query: 418 EDKVIDHILKSVQIVDRKVT 437
E K + +L V D +
Sbjct: 440 ERKALQKLLNGVSFEDVPQS 459
>gi|295706777|ref|YP_003599852.1| trigger factor [Bacillus megaterium DSM 319]
gi|294804436|gb|ADF41502.1| trigger factor [Bacillus megaterium DSM 319]
Length = 428
Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 187/438 (42%), Gaps = 21/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V + + + ++ + + N+ GFR GK+P + +G
Sbjct: 1 MSAKWEKQEGNQGVLTVEVEAAEFNKALDKAFTKVVKQVNVPGFRKGKMPRPLFEKRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + +D ++ E + + RP I + IE L
Sbjct: 61 ESLYQDALDILLPEAYSNAIVEAGIEPVDRPEIDVET---------IEKGQPLVFTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYT 178
+ P++++ + +L+V + V +++++ ++ + + + VKE + GD +D+
Sbjct: 112 VKPEVKLGEYKNLEVEKVDTTVTDEDVEAELKTLQERHAELVVKEEGTVAEGDTAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E LVGL+ G +KE+E FPE++ ++LAGK
Sbjct: 172 GFVDGEAFEGGKGENYSLEIGSNTFIPGFEEQLVGLEVGAEKEVEVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + E+ S ++++ A E+ A++ +K++ E ++
Sbjct: 232 AAKFKVKLHEIKSKELPALDDEFAKDVDEEVETLEALKAKTKEKLQSDKENQAESALRDT 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+++ + ++PE++ E + ++Q+ + Q ++
Sbjct: 292 LVEKAAENAEVEIPEAMFNTEMDRMMQEFEQRLQMQGLNLELYFQFSGQDEKALRDQMRP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I + N+EV+EEE++ L G + +++ +L +
Sbjct: 352 DAEKRVKINLTLEAISKAENLEVSEEEVEKELENMAGMYNMPVEEIKKVL----GSLDSI 407
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ + K ++ ++++ +
Sbjct: 408 KEDMKVRKAVEFLVENSK 425
>gi|325264755|ref|ZP_08131484.1| trigger factor [Clostridium sp. D5]
gi|324030047|gb|EGB91333.1| trigger factor [Clostridium sp. D5]
Length = 428
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 80/436 (18%), Positives = 179/436 (41%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + +P+ + + R + N+ GFR GKVP I+ +YG
Sbjct: 1 MSLQVENLEHNMAKLTIEVPAEEVEKALQAAYLKQRKQINMPGFRKGKVPRQMIEKMYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++++ E + + + P I + + +E
Sbjct: 61 EVFYDDAANKMVPEAYGKAFDECELELVSPPEIDVVQ---------LEKGKPFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++++ + L+V + V KE+D ++ + + N + E D++ +D+
Sbjct: 112 VRPEVKLGEYKGLKVDKISTRVTAKEVDEEIDKERERNARTIDVTDRAVEDNDQIVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V + ++GS E LVG + G + E+ FPE++ ++LAGK
Sbjct: 172 GFVDGVAFAGGKGSDYPLVIGSGSFIPGFEEQLVGAEIGKEMEVNVTFPEEYQSEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ + + ++++ A E+ + + IK+ E ++K + Q+
Sbjct: 232 DAVFKCTVHSIKAKELPELDDEFASEVSECETLEDYKAEVKKNIKERKEREGKEKKENQV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+D + D+PE++++ + + ++ + Q Q +E+ L+
Sbjct: 292 IDLAAENAEIDIPEAMIKMKIREMAGELEQRIQQQGLTIEQYFQFTGMTEEKMLEELRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++R+ T +VL I + NIE TEE + L + + K+ + ++
Sbjct: 352 AEKRIRTKLVLEEIVKAENIETTEERLTEELQKMAEAYEMEIDKLRGFMGENE--KKQME 409
Query: 414 APIFEDKVIDHILKSV 429
+ + I ++ S
Sbjct: 410 EGLAVQEAIKLLVDSA 425
>gi|260583668|ref|ZP_05851416.1| trigger factor [Granulicatella elegans ATCC 700633]
gi|260158294|gb|EEW93362.1| trigger factor [Granulicatella elegans ATCC 700633]
Length = 426
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 72/437 (16%), Positives = 162/437 (37%), Gaps = 22/437 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L I + ++ N+ GFR GKV +YG+
Sbjct: 1 MTAKFEKINTNEVVLTFEISEESIKQGLEVAFNRVKKNLNVPGFRKGKVSRQVFNKMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + + +P I I +E ++ +
Sbjct: 61 EALYQDALNFLLPDAYDNAVEETGIFPVTQPKIDIES---------LEKGQPWVIKATVI 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + L V + V E++++ ++ + VKE +E+ D V +D+
Sbjct: 112 VKPEVKLGEYKGLTVEKQDRTVSEQDVEDRLLQEQAKAAELVVKEGAAELADTVVIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ E +N +GS + LVG K GD E++ FPE++ ++L G+
Sbjct: 172 FLGEEAFEGGKGENYSLELGSGSFIPGFEDQLVGAKEGDNVEVKVTFPEEYHAENLKGQD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ EV + + ++ A E+ + ++ +++++ + V
Sbjct: 232 AVFKVTVHEVKTKELPELTDEFAKDVDDSVETLAELKEKFRKELEEAKAEAADEAVADLA 291
Query: 298 LDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
L ++P +V E + +Q +M + + + +
Sbjct: 292 LRQAVENAEIVELPAEMVHEEVHRQMQHYLNDMRRNGITPEMYYQITGTTEADLHKMMEK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A R T +VL I + NIEVT+ ++ + + ++ E + + L
Sbjct: 352 DADVRTKTNLVLEQIVKDENIEVTDADVDAEVKDLAAQYGMEEGAVRAAVS-----VEML 406
Query: 413 RAPIFEDKVIDHILKSV 429
+ I K + I S
Sbjct: 407 KNDISMKKALALITDSA 423
>gi|148983798|ref|ZP_01817117.1| trigger factor [Streptococcus pneumoniae SP3-BS71]
gi|147923945|gb|EDK75057.1| trigger factor [Streptococcus pneumoniae SP3-BS71]
gi|301799501|emb|CBW32048.1| trigger factor (prolyl isomerase) [Streptococcus pneumoniae OXC141]
Length = 427
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFKSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVIAAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLTELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLADLKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDTAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQVQSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|307708228|ref|ZP_07644695.1| trigger factor [Streptococcus mitis NCTC 12261]
gi|307615674|gb|EFN94880.1| trigger factor [Streptococcus mitis NCTC 12261]
Length = 427
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLAELKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++
Sbjct: 352 GEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQVQSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|289449958|ref|YP_003475570.1| trigger factor [Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289184505|gb|ADC90930.1| trigger factor [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 432
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 73/442 (16%), Positives = 190/442 (42%), Gaps = 19/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +L + + + E + + ++ GFR GK P + YG+
Sbjct: 1 MTSKIEKKEKSLVDLHLEFTAEEFLKALQEVYKYNAKRFSVPGFRKGKAPFALAMRYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ID ++ ++L + + +RP + I + L + L
Sbjct: 61 GTLYDDAIDNLVNAEYGKLLDENNLEPVVRPELEIVKVG---------SQEGLTVILHVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
P++ + + ++ + + EV ++++ ++ ++ +++ + + GD +D+
Sbjct: 112 NKPEVVLGEYKGIEAKKPVTEVKPEDVEAELKKVHEHSGRMVPVTDRPAAKGDTAKIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E S + +GS + ++G D+ ++ FPED++ K+LAGK
Sbjct: 172 GYLDGKEFEGGSSEGHDLKLGSGTFIPGFEDQVIGHNIDDEFDVNVTFPEDYTAKELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + + ++++ A +++ + K+ + + R + +
Sbjct: 232 PVVFKCKLHGLMVKELPELDDEFAKDVSEYDTLEEYKNSLRDKLTERAAEKDRADFEDNV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHML 353
++ + T D+P+++VE+E +G +Q+ M NQ Q + EE
Sbjct: 292 VNAVVANATVDIPDAMVESEIDGTVQRQTQSMRHQGIELNQYLQYIGKTLEEYRNEMREP 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
AK+++ T +V+ + +K N+ ++E++ ++ + + ++ +++ F K + + ++
Sbjct: 352 AKKQIKTSLVIEAVTKKENLPISEDDYKAGIERIGKQYGMSPEELEKRFGKNNSMINDM- 410
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I + ++ ++K + V+ K
Sbjct: 411 --IRTNLTVEMLVKEAKPVEEK 430
>gi|325912872|ref|ZP_08175250.1| trigger factor [Lactobacillus iners UPII 60-B]
gi|325477865|gb|EGC80999.1| trigger factor [Lactobacillus iners UPII 60-B]
Length = 442
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 89/455 (19%), Positives = 176/455 (38%), Gaps = 22/455 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EL I + ++ + + ++ + GFR G V YG+
Sbjct: 1 MSAKWEKTGKTTGELTFEISTEEISKGLDIAFKRVKKNLRVPGFRKGHVSRIVFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ +++ +P I E +
Sbjct: 61 EALYEDAVNAVLPVAYANAIAESKAEVVGQPKIMPVSM---------EKGKAWTFKAIVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P++++ + ++V + V K++D ++ + + N +K+ +S GD VT+DY
Sbjct: 112 TKPEVKLGDYKGVEVPKQNKRVLVKDVDAELKKRQEQNAELVLKDGKSAEGDTVTIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD E S KN +GS + L+ GD+ ++ FPED+S KDLAGK+
Sbjct: 172 TVDGTKFEGGSAKNYSLELGSKTFIPGFEDQLLNHTAGDEVDVVVTFPEDYSAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ES ++ +K+ E ++
Sbjct: 232 AHFATKIHEVKSKHLPKIDDEFAKDIDDSVESLDELKEKIKADLKKQKEEAAEDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ N + ++PE+++ + + L++ M + +E+ Q
Sbjct: 292 VKEAVNNASVDEIPEAMINEDVDNQLKQYLGGMQRQGIDPKTYFKLTGTTEEQLRQQLAT 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I NIEVT EE+ + + EK + L
Sbjct: 352 DAPERVKTNLVLEAIVSAENIEVTAEEINQEIKNLATDYNMDEKVVRRTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ I K I+ ++ + + V +K + S+
Sbjct: 407 KHDISIRKAINLVVDNAKEVAKKSSTKTATSEDSD 441
>gi|323697667|ref|ZP_08109579.1| trigger factor protein [Desulfovibrio sp. ND132]
gi|323457599|gb|EGB13464.1| trigger factor protein [Desulfovibrio desulfuricans ND132]
Length = 492
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 86/435 (19%), Positives = 192/435 (44%), Gaps = 13/435 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +KR++ V +P+ + + + I R +A++KGFR GKVP S I+S + K
Sbjct: 1 MEYNVEELSPVKRKITVEVPAEEVNAALSATIALYRVQADVKGFRKGKVPSSIIESKFRK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E ++I + EI++ + R + E D + + +++
Sbjct: 61 QVYGEATTDLINYQINEIMNGLSMQPMSRIDVDAKELVRD---------ENFTYSIEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
P++++ + L V + V + E+ I +NN + + + G+ +V +
Sbjct: 112 APKLDLPEYKGLTVEEVDVVVSDDEVTEVEERILENNAEVKVIEDDRPPKDGEVASVSFG 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D++I+E +N ++G E E++ L G+ E + FP D ++LAG+
Sbjct: 172 AYQDDIIVEGIQAENFDLVLGQNQALPEFEELIKTLSPGEGGETDITFPADFINENLAGR 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V + + V + + + +A + GF+ MR + + + + + ++L
Sbjct: 232 TVTMKAKLHAVKERIKPEMTDSVAQKAGFKDVETMRKGIRESYASQRKQMNKAAAQSELL 291
Query: 299 DYISN-KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
I F +P ++VE+ + +L+ + + + + Q++ EE + A+
Sbjct: 292 RGIIEGIAEFPLPPAMVEDRVDRLLKDLEYRLDRQGKGFQSLGKTPEELRSSFRPEAEAS 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V T I L + + +E++ EE+++ L Q + ++ +++ N + L+ +
Sbjct: 352 VKTEIFLLAVAAEEGLEISPEEIETTLSQLAMQSRQPLHELKKYYEDN-NLIVPLKDRLL 410
Query: 418 EDKVIDHILKSVQIV 432
DK + I S ++
Sbjct: 411 CDKASELIYDSAEVK 425
>gi|269959006|ref|YP_003328795.1| trigger factor [Anaplasma centrale str. Israel]
gi|269848837|gb|ACZ49481.1| trigger factor [Anaplasma centrale str. Israel]
Length = 441
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 195/448 (43%), Gaps = 21/448 (4%)
Query: 1 MQ----VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKS 56
MQ V E ++GLKR + + + L ++R+ +I + + GFR GKV L ++
Sbjct: 1 MQRFYVVKEVLNDGLKRGYEFTVENGYLEQKVDDRLREIAANVRMDGFRKGKVSLDLVRR 60
Query: 57 LYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL 116
G+ ++ E + +I + + + + + + + DL L
Sbjct: 61 SCGEDVVKEVLSGVIDDASSQFMKEGGFGDVITSEVRVTSHPK--VCSTEGKGGDLVYEL 118
Query: 117 SYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI---GDKV 173
++++P++ + +D+ + + EV ++++D+ + E+ +F V ++ GDKV
Sbjct: 119 QFELMPEVPSVNPEDIALKEMEAEVGQEDVDKFIGELKARYPSFVVSDSPKRRAAAGDKV 178
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+DY S L S K ++G L E + + G+K GD KE + FP D+ ++
Sbjct: 179 VIDYNSSFKGKALRGGSAKGFVAVLGGGHLPKEFEDKITGMKVGDVKEFKLGFPSDYRVR 238
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
AGK+V ++ + + P + + +LA GF M ++ +K F+ +
Sbjct: 239 LFAGKEVEMSVKLVSIMVPKDIGDHEELAKSCGFGCAEDMINFATESLKGRFAFMSDALM 298
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
++++ D++ Y VPES+V E I +++ ++
Sbjct: 299 RKELFDHMETIYQGQVPESVVSQESARIRRELAQ------------SELEAMGEDGILKE 346
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+RRV G++L + + NNI V ++ + + + + +L + +R
Sbjct: 347 AERRVRLGMLLMKVSQDNNIAVEARDISAFVQSNYLNYGASLESVLKLLRSNQGVRDHIR 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ EDKV+ +++ + + V L
Sbjct: 407 GKVLEDKVVRYMVAKAKKERQNVPAGDL 434
>gi|295092867|emb|CBK78974.1| trigger factor [Clostridium cf. saccharolyticum K10]
Length = 428
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 83/439 (18%), Positives = 182/439 (41%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + + +++ NI GFR GK P + I+ +YG
Sbjct: 1 MSLQVEKLEKNMAKLTIEVSAEEFEKAMKAAYNHNKTRFNIPGFRRGKAPQAMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + +I P L +E P I + + IE +
Sbjct: 61 GIFYEDAANAVIDMSYPRELEACEEEIVSSPEIEVVQ---------IEKGKPFIYTATVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++ + + ++V + V ++++++++ + N + GD+ +D+
Sbjct: 112 LKPEVTLGEYKGVEVEKTDATVTDEDVEKELKSVQDRNSRLVAVTDRPVADGDQTVIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD K+ +GS E +VG+ G+ KEIE FP ++ KDLAGK
Sbjct: 172 GYVDGKAFAGGEGKDYPLTIGSHSFIDTFEEQMVGMNIGETKEIEVTFPTEYHAKDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++KE+ +N++ A FE+ + + + + + E + + ++
Sbjct: 232 PAKFEVTVKEIKVKELPELNDEFASEVSDFETLAEYKENLKKTLTERKEKTAEAENENKV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHML 353
+D +++ D+PE++++ + + S NQ Q E +
Sbjct: 292 IDKVTDNAQMDIPEAMIKTRLRSMFDDYARRLQSQGLDINQYMQFTGMTRENIMDQMKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R++ TG+VL + E IEV EE++ + + + + K+ + L +++
Sbjct: 352 AVRQIRTGLVLEKVAEAEKIEVPEEDIDAEIAKMAEAYKMEADKLKGLLGERE--LEQMK 409
Query: 414 APIFEDKVIDHILKSVQIV 432
+ K ++ ++ ++V
Sbjct: 410 KDLAVKKAVELLVAEAKLV 428
>gi|25010179|ref|NP_734574.1| trigger factor [Streptococcus agalactiae NEM316]
gi|77414642|ref|ZP_00790780.1| trigger factor [Streptococcus agalactiae 515]
gi|41018225|sp|Q8E7Q0|TIG_STRA3 RecName: Full=Trigger factor; Short=TF
gi|23094530|emb|CAD45749.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159306|gb|EAO70479.1| trigger factor [Streptococcus agalactiae 515]
Length = 427
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 88/441 (19%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I + + + ++ ++ N+ GFR G +P + +G+
Sbjct: 1 MSTSFENKATNRGIITFTISQDEIKPALDQAFNKVKKDLNVPGFRKGHMPRTVFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
L E ++ ++ + +++ +P I + E D KL
Sbjct: 61 EALYENALNLVLPKAYEAAVAELGLDVVAQPKIDVVSM---------EKGQDWKLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + DL V D EV +E+D ++ N VK+ E+ GD V +D+
Sbjct: 112 TKPEVKLGDYKDLSVEVDASKEVSAEEVDAKVERERNNLAELTVKDGEAAQGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG K G ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGSKAGQTVDVNVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +I EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DAKFVTTIHEVKTKEVPALDDELAKDIDDEVETLDELKAKYRKELESAKEIAFDDAVEGA 291
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
++ ++N ++PE +V +E + + + M + +E+ + Y
Sbjct: 292 AIELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I E T+EE++ + + ++
Sbjct: 352 ADADKRVKTNLVIEAIAAAEGFEATDEEIEKEITDLASEYNMEADQVRGLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K +D I S +
Sbjct: 407 LKHDIAMKKAVDVITSSATVK 427
>gi|256828013|ref|YP_003156741.1| trigger factor [Desulfomicrobium baculatum DSM 4028]
gi|256577189|gb|ACU88325.1| trigger factor [Desulfomicrobium baculatum DSM 4028]
Length = 435
Score = 179 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 86/435 (19%), Positives = 192/435 (44%), Gaps = 13/435 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +KR++ V + + + + R A+IKGFR GKVP S +++ Y K
Sbjct: 1 MEYKVEELSPVKRKVAVEVSVEEVHAALAATVALYRKGADIKGFRKGKVPSSVVEAKYRK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E ++I + +IL + R + E E D + S++I
Sbjct: 61 QIYGEATTDLINYHINDILGELKLSPLSRIDVDAKEMERD---------ENFSYSFSFEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
P ++ + L V ++ VD ++++ + I +N +E + GD +D+
Sbjct: 112 APSFDLPEYKGLAVEEEDVVVDPQQVEDVIERIRQNMAKTVIIKEERPAATGDIAVIDFQ 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D +E + + +G + E +I++G+ G+ +E FP D LAG+
Sbjct: 172 AFQDGAAMEGIAANKFELPLGEGNSLPEFEDIVIGMTPGETRENALTFPADFINDKLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + ++ + + V++D A + G+ S ++ + + LV+ ++++
Sbjct: 232 TVSMQVTLHAIKARNLPEVDDDFADQAGGYSSVQDLKDAIEKSYVSTRKQLVKGDAQKKL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD I + +F++P+S+VE + + + +++ ++ + ++ E + A+
Sbjct: 292 LDGIKAEISFELPQSIVEEQIDKQIVELQGKLERQGKSLDSLGRTPAELREENRAQAEDV 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V + +VL I N+ V +E+ L + + D+++++ N + L+ +
Sbjct: 352 VKSSLVLLAIANAENLTVDPQEVDLVLQKMAASTGQDFHSIKDYYEQH-NLMIPLKDRVL 410
Query: 418 EDKVIDHILKSVQIV 432
DK ++ I ++ +
Sbjct: 411 ADKAMELIYENATVT 425
>gi|315924137|ref|ZP_07920363.1| trigger factor [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622539|gb|EFV02494.1| trigger factor [Pseudoramibacter alactolyticus ATCC 23263]
Length = 445
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 86/456 (18%), Positives = 173/456 (37%), Gaps = 18/456 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M +E L++ IP + + ++ + + ++GFR GK P I++ YGK
Sbjct: 1 MTAKILKNEKNVVTLEMSIPKDDFQKAMDQSYKKNKKHFTVQGFRKGKAPRKVIEAHYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ L + I+ E + + RP++ + SD +S
Sbjct: 61 GVFLEDAIEFAFPEAYQNAIEETKIEPVTRPALDKVDDVSD---------DGAVFVVSVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++ + + ++ V++ +I+ ++ ++ N + D V +DY
Sbjct: 112 VKPEVTLGDYKGAEIPVLEPAVEDTDIEERLKKMQDQNSRLVTDDEAEAANGDTVVIDYE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + + +GS+ + LVG+K+GD KE+ FPE++ DL GK
Sbjct: 172 GFVDGETFDGGKDEGYSLELGSSTFIPGFEDQLVGVKSGDDKEVNVTFPENYHSADLQGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV ++++ A F++ ++ KI + + + Q
Sbjct: 232 DATFKVHVVEVQRKELPELDDEFAKDVSEFDTLDEVKDDLRSKIAEEKKNAQLNVARTQA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
L++ DVP+ +VE E + +R +MS + E +
Sbjct: 292 LEHAVETAEIDVPDMMVEEEVDRQFDNMRQQMSGQGLSMDDYFKFTGQSREVFKESIAPD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + +VL IG+ IE TEEE + + F K + +
Sbjct: 352 AVKNIKADLVLEAIGKAEGIEPTEEETDDEIKEYAQAFNQEFDKYKESL--DDRMKEYIV 409
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
I K +D ++ + + V+ Q +++
Sbjct: 410 DSIRRRKTLDMLVDTAKQVENFKEKQQAEAAPADAE 445
>gi|295109355|emb|CBL23308.1| trigger factor [Ruminococcus obeum A2-162]
Length = 428
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 82/437 (18%), Positives = 174/437 (39%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + L + + + + + GFR GK P I+ +YGK
Sbjct: 1 MSLQVEKLEKNMAKLTIEVSAEDLEKAMQAAYQKAKGRITLPGFRKGKAPRKMIEQMYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I L + + +I E + L + D +P I + + E
Sbjct: 61 GIFLEDAANALIPEHYSKALEECDLEIVSQPEIDVTQA---------EPGKAFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++ + + ++V + EV +++++ ++ + + N E D T+D+
Sbjct: 112 VKPEVTLGEYKGVEVPKSETEVTDEDVEAELKKEQEKNSRTVTVEDRGAENGDITTIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +GS + LVG K GD E++ FPE++ K+LAGK
Sbjct: 172 GFVDGEAFEGGKGTDYPLTLGSNSFIPGFEDQLVGSKAGDHVEVKVTFPEEYQAKELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +K+V + +++D A F++ + + + + + E R +
Sbjct: 232 EAVFQCDVKKVEAKELPELDDDFAQDVSEFDTLAEYKEDVKKNLTEKKEKAARTAKENAA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+D D+P++++ + +L M S + ++ +
Sbjct: 292 VDKAIENAEMDIPDAMLNTQVRQMLDDFARRMQSQGLTMEQYFQFTGMTLDKMQEEMKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I E NI+ TEEE++ + + +K+ + L +++
Sbjct: 352 ALKRIQTRLVLEKIAEVENIQPTEEEVEEEFKKMADAYKMEVEKIKELLGDRE--LEQMK 409
Query: 414 APIFEDKVIDHILKSVQ 430
+ K + I +
Sbjct: 410 KDMAVQKAVTLIADEAK 426
>gi|22536290|ref|NP_687141.1| trigger factor [Streptococcus agalactiae 2603V/R]
gi|77412054|ref|ZP_00788381.1| trigger factor [Streptococcus agalactiae CJB111]
gi|41018222|sp|Q8E292|TIG_STRA5 RecName: Full=Trigger factor; Short=TF
gi|22533112|gb|AAM99013.1|AE014196_9 trigger factor [Streptococcus agalactiae 2603V/R]
gi|77161911|gb|EAO72895.1| trigger factor [Streptococcus agalactiae CJB111]
gi|319744033|gb|EFV96411.1| trigger factor [Streptococcus agalactiae ATCC 13813]
Length = 427
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 88/441 (19%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I + + + ++ ++ N+ GFR G +P + +G+
Sbjct: 1 MSTSFENKATNRGIITFTISQDEIKPALDQAFNKVKKDLNVPGFRKGHMPRTVFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
L E ++ ++ + +++ +P I + E D KL
Sbjct: 61 EALYENALNLVLPKAYEAAVAELGLDVVAQPKIDVVSM---------EKGQDWKLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + DL V D EV ++E+D ++ N VK+ E+ GD V +D+
Sbjct: 112 TKPEVKLGDYKDLSVEVDASKEVSDEEVDAKVERERNNLAELTVKDGEAAQGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG K G ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGSKAGQTVDVNVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +I EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DAKFVTTIHEVKTKEVPALDDELAKDIDDEVETLDELKAKYRKELESAKEIAFDDAVEGA 291
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
++ ++N ++PE +V +E + + + M + +E+ + Y
Sbjct: 292 AIELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I E T+EE++ + + ++
Sbjct: 352 ADADKRVKTNLVIEAIAAAEGFEATDEEIEKEITDLASEYNMEADQVRGLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K +D I S +
Sbjct: 407 LKHDIAMKKAVDVITSSATVK 427
>gi|312875459|ref|ZP_07735462.1| trigger factor [Lactobacillus iners LEAF 2053A-b]
gi|311088970|gb|EFQ47411.1| trigger factor [Lactobacillus iners LEAF 2053A-b]
Length = 442
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 89/455 (19%), Positives = 176/455 (38%), Gaps = 22/455 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EL I + ++ + + ++ + GFR G V YG+
Sbjct: 1 MSAKWEKTGKTTGELTFEISTEEISKGLDIAFKRVKKNLRVPGFRKGHVSRVVFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ +++ +P I E +
Sbjct: 61 EALYEDAVNAVLPVAYANAIAESKAEVVGQPKIMPVSM---------EKGKAWTFKAIVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P++++ + ++V + V K++D ++ + + N +K+ +S GD VT+DY
Sbjct: 112 TKPEVKLGDYKGVEVPKQNKRVLVKDVDAELKKRQEQNAELVLKDGKSAEGDTVTIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD E S KN +GS + L+ GD+ ++ FPED+S KDLAGK+
Sbjct: 172 TVDGTKFEGGSAKNYSLELGSKTFIPGFEDQLLNHVAGDEVDVVVTFPEDYSAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ES ++ +K+ E ++
Sbjct: 232 AHFATKIHEVKSKHLPKIDDEFAKDIDDSVESLDELKEKIKADLKKQKEEAAEDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ N + ++PE+++ + + L++ M + +E+ Q
Sbjct: 292 VKEAVNNASVDEIPEAMINEDVDNQLKQYLGGMQRQGIDPKTYFKLTGTTEEQLRQQLAT 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I NIEVT EE+ + + EK + L
Sbjct: 352 DAPERVKTNLVLEAIVSAENIEVTAEEINQEIKNLATDYNMDEKVVRRTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ I K I+ ++ + + V +K + S+
Sbjct: 407 KHDISIRKAINLVVDNAKEVAKKSSTKTATSEDSD 441
>gi|312864085|ref|ZP_07724321.1| trigger factor [Streptococcus vestibularis F0396]
gi|322517611|ref|ZP_08070479.1| trigger factor [Streptococcus vestibularis ATCC 49124]
gi|311100498|gb|EFQ58705.1| trigger factor [Streptococcus vestibularis F0396]
gi|322123776|gb|EFX95354.1| trigger factor [Streptococcus vestibularis ATCC 49124]
Length = 427
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 88/441 (19%), Positives = 181/441 (41%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + + I +++ + ++ ++ N+ GFR G +P + +G+
Sbjct: 1 MSVSFENTATNRGVVTFTIGQDKIQPALDQAFNKVKKNLNVPGFRKGHMPRAVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ I+ +++ D +P I + IE D L
Sbjct: 61 EALYDDALNAILPSAYEAAIAELDLDVVAQPKIDVKS---------IEKGQDWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+V+ + EV ++E+D ++ +N VKE +E GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVSVEASKEVTDEEVDAKLENERRNLAELVVKEGAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + +N +GS + LVG K GD+ E++ FPED+ DLAGK
Sbjct: 172 GSVDGVEFDGGKGENHSLELGSGQFIPGFEDQLVGAKAGDEVEVKVTFPEDYQASDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 AAVFVTKVNEVKAKEVPALDDELAKDLDDEVETLDELKAKYRKELEAAKEIAYDDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
LD ++P +VE+E + + + M + E+ + Y
Sbjct: 292 ALDLAVENAEIVELPAEMVEDEVHRAMNEFMGNMQRQGISPEMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ + + TEEE+Q + + ++
Sbjct: 352 ADADKRVKTNLVIEAVAAAEGFDATEEEIQKEINDLAAEYNMEVSQVSALLSP-----EM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDITMKKAVEVITSTAKVK 427
>gi|307710536|ref|ZP_07646972.1| trigger factor [Streptococcus mitis SK564]
gi|307618689|gb|EFN97829.1| trigger factor [Streptococcus mitis SK564]
Length = 427
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I ++ E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVSSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLAELKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEVEQLAADYNMEVAQVQSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|149175100|ref|ZP_01853723.1| trigger factor [Planctomyces maris DSM 8797]
gi|148846078|gb|EDL60418.1| trigger factor [Planctomyces maris DSM 8797]
Length = 487
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 94/445 (21%), Positives = 186/445 (41%), Gaps = 13/445 (2%)
Query: 1 MQVIEKFSE--GLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLY 58
M V K E K+ + V +P + ++E + ++ +A + GFR G VP I+ +
Sbjct: 20 MSVTAKIDEVGPCKKHVTVTVPRADIDHYYSESVSELGGQATVPGFRVGHVPTKLIEKRF 79
Query: 59 GKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + + ++ E + I D P+I DI S I +
Sbjct: 80 RQELSDQVKQRVLMESLELIAEDNDLDPINEPTI-------DIESLEIPEDGEFTFEFEV 132
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
++ P ++ + L++ + E+ +K++D + E ++ +E D + +
Sbjct: 133 EVRPDFKLPEYKGLKLERPAREIADKDVDEYLTRFLGQYGEMEERKGAAEKEDYLELSIK 192
Query: 179 VSVDNVILEDQSKKNVQFIVG---SADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D L + ++ V + E++ G+KTGD +E E + ++
Sbjct: 193 FEHDGKHLSEIAELVVPLRPVLRLHDAEITNFGELMTGVKTGDTRETEVEVSGEADQIEM 252
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
G+KV+ F++K V +N +L R+G ESE +R +++ + RQ +
Sbjct: 253 RGEKVKALFTVKSVKFIQTPEINEELLERIGAESEEELREEVKNILERQLTYEQRQSTRS 312
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
Q+LD I+ +D+PE+LV + L++ EM A Q++ + + E Q +
Sbjct: 313 QVLDKITESADWDLPETLVSKQVENALRREILEMQQAGFSRQDIQARENELRQKAISTTR 372
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + VL I N+EV E+ +Y + +++ K + L A
Sbjct: 373 QALKEHFVLDKIATTENLEVQPSEIDMEIYYMAMQQGESPRRIRARMVKS-GMIENLEAQ 431
Query: 416 IFEDKVIDHILKSVQIVDRKVTFDQ 440
+ E K +D IL+ + D K+ +
Sbjct: 432 LRERKAVDVILEKAEYTDVKMKPQE 456
>gi|118574059|sp|Q5PBD1|TIG_ANAMM RecName: Full=Trigger factor; Short=TF
Length = 441
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 194/448 (43%), Gaps = 21/448 (4%)
Query: 1 MQ----VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKS 56
MQ V E S+ LKR + + + L ++R+ +I + + GFR GKV L ++
Sbjct: 1 MQRFYVVKEVLSDKLKRVYEFTVGNEYLEQQVDDRLREIAANVRMDGFRKGKVSLDLVRR 60
Query: 57 LYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL 116
G+ ++ E + +++ + + + + + + I DL L
Sbjct: 61 NCGEDVVREVLSKVVDDASSQFMQEGGFGDVVTSEVRITSHPK--VCSTEGKGGDLVYEL 118
Query: 117 SYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI---GDKV 173
++++P++ + +++ + + E+ ++++D+ + E+ F ++ + GDKV
Sbjct: 119 QFELMPEVPSINPEEIALKEMEAEIGQEDVDKFIGELKTRYPNFVASDSPKQRAAAGDKV 178
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+DY S L S K ++G L E + + G+K GD KE + FP D+ ++
Sbjct: 179 VIDYNSSFKGKALRGGSAKGFVAVLGGGHLPKEFEDKITGMKVGDVKEFKLGFPSDYRVR 238
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
AGK+V ++ + + P V + +LA GF M ++ +K F+ +
Sbjct: 239 LFAGKEVEMSVKLVSIMVPKDVGDHEELAKSCGFGCAEDMVNFATESLKGRFAFMSDALM 298
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
++++ D++ Y VPES+V E I +++ ++
Sbjct: 299 RKELFDHMETIYQGQVPESVVSQESARIRRELA------------PSELEAMGEDGILKE 346
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+RRV G++L + + NNI V ++ + + + + +L + +R
Sbjct: 347 AERRVRLGMLLMKVSQDNNIAVEARDISAFVQSNYLNYGASLESVLKLLRSNQGVRDHIR 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ EDKV+ +++ + + V L
Sbjct: 407 GKVLEDKVVRYMVAKAKKERQNVPAGDL 434
>gi|197302443|ref|ZP_03167498.1| hypothetical protein RUMLAC_01171 [Ruminococcus lactaris ATCC
29176]
gi|197298341|gb|EDY32886.1| hypothetical protein RUMLAC_01171 [Ruminococcus lactaris ATCC
29176]
Length = 429
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 85/437 (19%), Positives = 183/437 (41%), Gaps = 19/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + + + RSK ++ GFR GKVP I+ +YG
Sbjct: 1 MSLQVENLEHNMAKLTITVSAEEVEKALQAAYLKQRSKISLPGFRKGKVPRQMIEKMYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E + +I E + + + A +P+I + + +E D
Sbjct: 61 EVFYDEAANHMISEAYGKAYDECELEIASQPTIDVVQ---------LEKGKDFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++++ + L+V + V +KE+D ++ + + N EV + + D VT+D+
Sbjct: 112 VKPEVKLGEYKGLKVDKVSTRVMQKEVDEEIEKERERNARTVEVTDRAVQDKDIVTLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N +GS E L+G + + E++ FPE++ K+LAGK
Sbjct: 172 GFVDGVAFEGGKGENYPLTIGSGAFIPGFEEQLIGAEIDKETEVKVTFPEEYQAKELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ E+ + ++++ A E+ + KIK+ E ++K + Q
Sbjct: 232 EAVFKCTVHEIKAKELPELDDEFASEVSEEAETLEDYKAEVKAKIKERKENEGKEKKENQ 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ D+P +V+ + + + + +E+ ++
Sbjct: 292 AVEQAVANAEIDLPAPMVDLQAKQMADDFARRIMQQGMSVEQYFQFTGLNEEKMMEELKP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++R+ T +VL I NIEV++E + L + + +K+ + + ++
Sbjct: 352 QAEKRIRTRLVLEAIVAAENIEVSDERLDEELQKMADSYQMEVEKLKEFMGENE--KKQM 409
Query: 413 RAPIFEDKVIDHILKSV 429
+ I + I ++
Sbjct: 410 KEDIAVQDAVTLITEAA 426
>gi|309807101|ref|ZP_07701080.1| trigger factor [Lactobacillus iners LactinV 03V1-b]
gi|308166531|gb|EFO68731.1| trigger factor [Lactobacillus iners LactinV 03V1-b]
Length = 442
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 89/455 (19%), Positives = 175/455 (38%), Gaps = 22/455 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EL I + ++ + + ++ + GFR G V YG+
Sbjct: 1 MSAKWEKTGKTTGELTFEISTEEISKGLDIAFKRVKKNLRVPGFRKGHVSRVVFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ +++ +P I E +
Sbjct: 61 EALYEDAVNAVLPVAYANAIAESKAEVVGQPKIMPVSM---------EKGKAWTFKAIVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P++++ + ++V + V K++D ++ + + N +K+ +S GD VT+DY
Sbjct: 112 TKPEVKLGDYKGVEVPKQNKRVLVKDVDAELKKRQEQNAELVLKDGKSAEGDTVTIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD E S KN +GS + L+ GD+ ++ FPED+S KDLAGK+
Sbjct: 172 TVDGTKFEGGSAKNYSLELGSKTFIPGFEDQLLNHTAGDEVDVVVTFPEDYSAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ES ++ +K+ E ++
Sbjct: 232 AHFATKIHEVKSKHLPKIDDEFAKDIDDSVESLDELKEKIKADLKKQKEEAAEDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ N + ++PE+++ + + L++ M + +E+ Q
Sbjct: 292 VKEAVNNASVDEIPEAMINEDVDNQLKQYLGGMQRQGIDPKTYFKLTGTTEEQLRQQLAT 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I NIEVT EE+ + + EK + L
Sbjct: 352 DAPERVKTNLVLEAIVSAENIEVTAEEINQEIKNLATDYNMDEKVVRRTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ I K I ++ + + V +K + S+
Sbjct: 407 KHDISIRKAIKLVVDNAKEVAKKSSTKTATSEDSD 441
>gi|94991189|ref|YP_599289.1| trigger factor [Streptococcus pyogenes MGAS10270]
gi|118574092|sp|Q1JF14|TIG_STRPD RecName: Full=Trigger factor; Short=TF
gi|94544697|gb|ABF34745.1| Trigger factor, ppiase [Streptococcus pyogenes MGAS10270]
Length = 456
Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 169/441 (38%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 30 MSTSFENKATNRGVITFTISQDKIKPALDKAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 89
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 90 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGKEWTLSAEVV 140
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V D EV ++++D ++ +N +K+ E+ GD V +D+
Sbjct: 141 TKPEVKLGDYKNLVVEVDASKEVSDEDVDAKIERERQNLAELIIKDGEAAQGDTVVIDFV 200
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K GD+ E+ FPE + +DLAGK
Sbjct: 201 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGK 260
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEF---LVRQKVKR 295
+ +I EV + ++++LA + + ++ + + +
Sbjct: 261 AAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGA 320
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
I ++N D+PE ++ E N + + M + E+ Y
Sbjct: 321 AIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQRQGISPEMYFQLTGTTQEDLHNQYS 380
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E T+ E++ + + ++
Sbjct: 381 AEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATEYNMPADQVRSLLSAD-----M 435
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 436 LKHDIVMKKAVEVITSTASVK 456
>gi|331086221|ref|ZP_08335303.1| trigger factor [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406380|gb|EGG85894.1| trigger factor [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 428
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 81/436 (18%), Positives = 183/436 (41%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + + + L + ++K ++ GFR GKVP I+ +YG
Sbjct: 1 MSLQVENLEKNMAKLTIEVSAEELEKAIQGAYLKQKNKISVPGFRKGKVPRQMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + +I E + +P + + + +E
Sbjct: 61 EIFYDDAANALIPEAYSNAYDESGLEIVSQPKVEVVQ---------LEKGKPFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++ + + L+V + V KE++ ++ + + N EV++ + GD+V +D+
Sbjct: 112 VKPEVTLGEYKGLEVDKVSNRVTAKEVEEEIKKEQEKNARTIEVEDRAVQDGDEVVLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N +GS E LVG + + E+ FPE++ ++LAGK
Sbjct: 172 GFVDGVAFEGGKGENYPLTIGSGSFIPGFEEQLVGAEKEKEVEVNVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ E+ + ++++ A F++ A + KIK+ R+K + Q
Sbjct: 232 PAVFKCTVHEIKAKELPELDDEFAAEVSEFDTLDAYKADVKAKIKERKNTEGRRKKEDQA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
++ T ++P+++++ E + + + E+ L+
Sbjct: 292 VEKAVANATMEIPDAMIDTEVRQMANDFSQRIMQQGLTMEQYFQFTGMTAEKMLEELRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I + NIE+++E++ L + + +K+ + + +++
Sbjct: 352 AVKRIETRLVLEAIAKAENIEISDEKLDEELAKMAEAYKMEVEKLKEFMGEAE--KKQMK 409
Query: 414 APIFEDKVIDHILKSV 429
A + + + +++S
Sbjct: 410 ADMAVQEAVTFLVESA 425
>gi|87308820|ref|ZP_01090959.1| trigger factor [Blastopirellula marina DSM 3645]
gi|87288531|gb|EAQ80426.1| trigger factor [Blastopirellula marina DSM 3645]
Length = 489
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 71/442 (16%), Positives = 182/442 (41%), Gaps = 12/442 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+V + +R + V + + F++ +++ A + GFRPG P ++ + K
Sbjct: 24 EVKVESPSSCQRHVTVTVSHEDVDRYFDKAFDEMAPTAAVPGFRPGHAPRKLVEKRFRKE 83
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ ++ ++ + + + +++ A P + + L ++
Sbjct: 84 VANQVKGSLLMDSMAQASDEQNFSAISEPDFK-------FDAVELPEEGPLTFEFDIEVR 136
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P+ ++ + L++ + + ++ +ID+ +A++ + +E+ D +T++ +
Sbjct: 137 PEFDLPKWKGLELNKPVKTFEKADIDKHLAKVLDRFSEIAPIDAPAEMDDFLTLNIVSKL 196
Query: 182 DNVILEDQSKKNVQFIVG---SADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D + + +V+ + E + ++G+K GD+K + E+ + +DL GK
Sbjct: 197 DGKEIARTEEISVRLRDTLSFQDANWEEFGKTVLGVKAGDKKSGKATVSEEAANEDLKGK 256
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ L + EV +N + ++ FESE +R +++ E+ +Q+++ I
Sbjct: 257 ELDLEIEVLEVKRLELPEMNAEFLQKIGSFESEGDLRDFVKADMERQFEYHQQQQLRGAI 316
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + +D+P +L+ + L++ ++ S + + Q ++
Sbjct: 317 TEQLIKDADWDLPPALLRRQAGRELERAILDLRSYGFDEDAIRGYENTLRQNSLQSTEKA 376
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ +L I E+ IE E+ + + Q + + + +K + LR I
Sbjct: 377 LKEHFILERIAEEETIEDAPEDYEREIMQIAAQSKQSPRSVRARLEK-QGLMDTLRNQII 435
Query: 418 EDKVIDHILKSVQIVDRKVTFD 439
E KVI+ I + + D
Sbjct: 436 ERKVIELITGEAKFTEVPAEAD 457
>gi|28378739|ref|NP_785631.1| trigger factor [Lactobacillus plantarum WCFS1]
gi|254556942|ref|YP_003063359.1| trigger factor [Lactobacillus plantarum JDM1]
gi|38258329|sp|Q88VE1|TIG_LACPL RecName: Full=Trigger factor; Short=TF
gi|28271576|emb|CAD64481.1| trigger factor [Lactobacillus plantarum WCFS1]
gi|254045869|gb|ACT62662.1| trigger factor [Lactobacillus plantarum JDM1]
Length = 440
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/449 (17%), Positives = 186/449 (41%), Gaps = 23/449 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EG + EL I ++++++ ++ + + N+ GFR GKVP +YG+
Sbjct: 1 MAAKWEKKEGNQGELTFEIGADKISEGIDKAFQRTKKNLNVPGFRKGKVPRQIFNQMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E E + + + +P I ++ E L+
Sbjct: 61 EALYQDALNIVLPEAYEEAIKETEIEPVDQPQIDVDSM---------EKGKPWVLKAVVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++++ + +L VT+ V K++D ++ + ++ + GD V +D+
Sbjct: 112 VKPEVKLGQYKELSVTRQNTRVYAKDVDAELESRREKQAELVLKEDQPAAKGDTVVIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS + LVG+K GD+ E++ FP+D+ +DL K
Sbjct: 172 GFVDGEPFEGGESENYSLELGSNSFIPGFEDQLVGVKAGDETEVKVTFPKDYQAEDLQDK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++ A ++ ++ ++K+ E ++ +
Sbjct: 232 EATFKVTVHEVKTKELPELDDEFAKDVDEDVDTLEELKAKIKDELKEQKESAAHDAIEDE 291
Query: 297 ILDYISNKYTFD-VPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
L+ + +P+++ E++ + + + M + +++ + +
Sbjct: 292 ALNQAVDNAEIQAIPDAMKEDDIHRQMDQYLANMQQQGIDPKTYYKLTGTTEDDLHKQFA 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+RRV T +VL + E NI+ +++E+ + + ++ E +
Sbjct: 352 ADAERRVKTNLVLEAVVEAENIKPSQDEIAAEVKDLASQYNMEESAVRGALTDD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
L I + +D I S + +
Sbjct: 407 LSHDIAIRQAVDLIADSAKQNAKAEDKKD 435
>gi|239941129|ref|ZP_04693066.1| trigger factor [Streptomyces roseosporus NRRL 15998]
gi|239987607|ref|ZP_04708271.1| trigger factor [Streptomyces roseosporus NRRL 11379]
gi|291444570|ref|ZP_06583960.1| trigger factor [Streptomyces roseosporus NRRL 15998]
gi|291347517|gb|EFE74421.1| trigger factor [Streptomyces roseosporus NRRL 15998]
Length = 466
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 76/425 (17%), Positives = 169/425 (39%), Gaps = 21/425 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L + +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLSIEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPARVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEGELNVLGQPEVDITE---------LKDGELLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IEI + ++VT D EV ++E+++ + ++ + + E + GD VT+D
Sbjct: 112 VRPEIEIPDYSGIEVTVDALEVTDEEVEKAVEQLRERFASTNPVERAAADGDVVTIDLQA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED V + +GS +L + + GL+ G E F GK
Sbjct: 172 KVDGEVLEDGVADGVSYTIGSGELLDGIDDAVTGLEAG----GEATFTSQLKGGSAEGKD 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +++D A + F++ ++ ++++ ++ + + ++L
Sbjct: 228 AEVTVKVTAVAARELPELDDDFAQMASEFDTLEELKADSRKRLETTKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
+ + +PE L+ +E + + + EE
Sbjct: 288 EELLKLAEVPIPEKLLADEVQTRKHNLEHHQLGQMGLDLEKYLEIQGKTLEEFENETSEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T +L + K + V +EE+ L ++ + + + L
Sbjct: 348 AIKGIKTQFILDELVNKEKLNVNQEELTEHLMRRAASSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFE 418
+
Sbjct: 407 GEVAR 411
>gi|255002919|ref|ZP_05277883.1| trigger factor (tig) [Anaplasma marginale str. Puerto Rico]
gi|255004047|ref|ZP_05278848.1| trigger factor (tig) [Anaplasma marginale str. Virginia]
Length = 441
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 93/448 (20%), Positives = 194/448 (43%), Gaps = 21/448 (4%)
Query: 1 MQ----VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKS 56
MQ V E S+ LKR + + + L ++R+ +I + + GFR GKV L ++
Sbjct: 1 MQRFYVVKEVLSDKLKRVYEFTVGNEYLEQQVDDRLREIAANVRMDGFRKGKVSLDLVRR 60
Query: 57 LYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL 116
G+ ++ E + +++ + + + + + + I DL L
Sbjct: 61 NCGEDVVREVLSKVVDDASSQFMQEGGFGDVVTSEVRITSHPK--VCSTEGKGGDLVYEL 118
Query: 117 SYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI---GDKV 173
++++P++ + +D+ + + EV ++++++ + E+ +F V ++ GDKV
Sbjct: 119 QFELMPEVPSVNPEDIALKEMEAEVGQEDVEKFIGELKARYPSFVVSDSPKRRAAAGDKV 178
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+DY S L S K ++G L E + + G+K GD KE + FP D+ ++
Sbjct: 179 VIDYNSSFKGKALRGGSAKGFVAVLGGGHLPKEFEDKITGMKVGDVKEFKLGFPSDYRVR 238
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
AGK+V ++ + + P V +LA GF M ++ +K F+ +
Sbjct: 239 LFAGKEVEMSVKLVSIMVPKDVGDREELAKSCGFGCAEDMVNFATESLKGRFAFMSDALM 298
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
++++ D++ Y VPES+V E I +++ ++
Sbjct: 299 RKELFDHMETIYQGQVPESVVSQESARIRRELA------------PSELEAMGEDGILKE 346
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+RRV G++L + + NNI V ++ + + + + +L + +R
Sbjct: 347 AERRVRLGMLLMKVSQDNNIAVEARDISAFVQSNYLNYGASLESVLKLLRSNQGVRDHIR 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ EDKV+ +++ + + V L
Sbjct: 407 GKVLEDKVVRYMVAKAKKERQNVPAGDL 434
>gi|308271898|emb|CBX28506.1| Trigger factor [uncultured Desulfobacterium sp.]
Length = 453
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 81/439 (18%), Positives = 191/439 (43%), Gaps = 13/439 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + +K+ L + +P++ + N + ++ A +KGFR GK+P S ++ + K
Sbjct: 17 MEVTIEDISTVKKILHIEVPNDMVMQEINNAYDTLKKTAKLKGFRQGKIPRSVLERYFKK 76
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ ++ ++++K+ + + +++ + I E I+ K + +I
Sbjct: 77 DVHADVSNKLLKDSFIDAVREKNLKIVGDLKIEPVE---------IDEKSPYKYEATIEI 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQ---MAEIAKNNVAFEVKETESEIGDKVTVDY 177
P+I F L + +++ + EKE++ Q + + E + +
Sbjct: 128 RPEISGIEFKGLNLKKNVYNIGEKEVEAQLKLLQKNLSQQKTIEEIRPAANNDYALITYE 187
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ E +N +G + + +VG+K G+ K+I FPED+ LA
Sbjct: 188 GLKDGQPFEETAKTENYTMKIGLGHFTKDFDDQVVGMKPGENKKISINFPEDYFNSRLAN 247
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + ++ E+ + +N++ A F++ ++ + + Q E V Q++ Q
Sbjct: 248 INIVFDVTLNEIREEILPEINDEFAKNFGEFKTLEELKDKIKENLTQGYEKRVEQEINEQ 307
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I + +K F+VPE+++ E I+ + + N + + E + Y +A++
Sbjct: 308 IFTELISKTQFEVPETMIGYELENIIAEAERSFAYHNTSLEALGLTKESLSEKYRDVAEK 367
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ ++L I E+ + + +EEMQ + F +++ + + + + L + +
Sbjct: 368 QAKRHLILDKIIEQEKLSLKDEEMQEGFKKISEDFQQPLEEIKEFYSQNMDRLNYFKQTL 427
Query: 417 FEDKVIDHILKSVQIVDRK 435
E I+ IL++ I + +
Sbjct: 428 LEKNAINLILENSNIENVE 446
>gi|76788439|ref|YP_328829.1| trigger factor [Streptococcus agalactiae A909]
gi|119370941|sp|Q3K3S4|TIG_STRA1 RecName: Full=Trigger factor; Short=TF
gi|76563496|gb|ABA46080.1| trigger factor [Streptococcus agalactiae A909]
Length = 427
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 88/441 (19%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I + + + ++ ++ N+ GFR G +P + +G+
Sbjct: 1 MSTSFENKATNRGIITFTISQDEIKPALDQAFNKVKKDLNVPGFRKGHMPRTVFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
L E ++ ++ + +++ +P I + E D KL
Sbjct: 61 EALYENALNLVLPKAYEAAVAELGLDVVAQPKIDVVSM---------EKGQDWKLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + DL V D EV ++E+D ++ N VK+ E+ GD V +D+
Sbjct: 112 TKPEVKLGDYKDLSVEVDASKEVSDEEVDAKVERERNNLAELTVKDGEAAQGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG K G ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGSKAGQTVDVNVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +I EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DAKFVTTIHEVKTKEVPALDDELAKDIDEEVETLDELKAKYRKELESAKEIAFDDAVEGA 291
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
++ ++N ++PE +V +E + + + M + +E+ + Y
Sbjct: 292 AIELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I E T+EE++ + + ++
Sbjct: 352 ADADKRVKTNLVIEAIAAAEGFEATDEEIEKEITDLASEYNMEADQVRGLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K +D I S +
Sbjct: 407 LKHDIAMKKAVDVITSSATVK 427
>gi|260654934|ref|ZP_05860422.1| trigger factor [Jonquetella anthropi E3_33 E1]
gi|260630249|gb|EEX48443.1| trigger factor [Jonquetella anthropi E3_33 E1]
Length = 467
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 80/448 (17%), Positives = 183/448 (40%), Gaps = 21/448 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ E + + IP+ + + I + KANI GFR GK P ++ +GK
Sbjct: 22 KSELLSQEKNVVTVKITIPAEDFSAQVSRTIASVGRKANIPGFRKGKAPRRVVEMRFGKE 81
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++E++ + + E+ S+ D P + + + E D+ L ++++
Sbjct: 82 ALRAEALEEMLAKTMEEVSSEYDLEPIDEPKVDVKDM---------EEGHDVVLEATFEV 132
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + F ++ + + ++ + + + +++ ++ S GD+V YT +
Sbjct: 133 KPEVTLPEFGEITAEKPSFVISDQMVADGVENVRRSHGEWKTSANPSASGDRVKAAYTTT 192
Query: 181 VD---NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ IL K F++ S L E + L+G GD++ E + + K LAG
Sbjct: 193 IKDDAGSILSSHEPKVETFMLDSLSLKQEIVDALLGAVAGDKRHAEVRIDDSYQDKALAG 252
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
K +F ++E+ P + +L + ++E ++ +++ E R+ +
Sbjct: 253 KMACYDFDVQEILELEPAALTPELFKKATGKDLKTEDELKAHLRSTMEERLESDSRRAAE 312
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQY 349
L I + ++PE++V+ + +L++ + + + E
Sbjct: 313 SDALKKICQLASVELPETMVQRQKAHLLRRAEENVKNRTGLTLEEYYAQSGQDFEGFKSQ 372
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A+ V +V+ EK + V E++ + + + + QK P+ L
Sbjct: 373 LDTEARNDVKEYLVMDACTEKFGVNVQPEDLDKEIETMAANYHVAPESVKAMLQKKPDDL 432
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVT 437
L + K +D ++ +V+ V+
Sbjct: 433 RSLISSAKYRKTLDAVMGAVKTVEVNKN 460
>gi|50914966|ref|YP_060938.1| trigger factor [Streptococcus pyogenes MGAS10394]
gi|71904263|ref|YP_281066.1| trigger factor [Streptococcus pyogenes MGAS6180]
gi|94995063|ref|YP_603161.1| trigger factor [Streptococcus pyogenes MGAS10750]
gi|118574093|sp|Q1J4W9|TIG_STRPF RecName: Full=Trigger factor; Short=TF
gi|119371018|sp|Q48RE9|TIG_STRPM RecName: Full=Trigger factor; Short=TF
gi|50904040|gb|AAT87755.1| Trigger factor, ppiase [Streptococcus pyogenes MGAS10394]
gi|71803358|gb|AAX72711.1| trigger factor, ppiase [Streptococcus pyogenes MGAS6180]
gi|94548571|gb|ABF38617.1| Trigger factor, ppiase [Streptococcus pyogenes MGAS10750]
Length = 456
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 169/441 (38%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 30 MSTSFENKATNRGVITFTISQDKIKPALDKAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 89
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 90 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGKEWTLSAEVV 140
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V D EV ++++D ++ +N +K+ E+ GD V +D+
Sbjct: 141 TKPEVKLGDYKNLVVEVDASKEVSDEDVDAKIERERQNLAELIIKDGEAAQGDTVVIDFV 200
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K GD+ E+ FPE + +DLAGK
Sbjct: 201 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGK 260
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEF---LVRQKVKR 295
+ +I EV + ++++LA + + ++ + + +
Sbjct: 261 AAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGA 320
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
I ++N D+PE ++ E N + + M + E+ Y
Sbjct: 321 AIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQRQGISPEMYFQLTGTTQEDLHNQYS 380
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E T+ E++ + + ++
Sbjct: 381 AEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATEYNMPADQVRSLLSAD-----M 435
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 436 LKHDIAMKKAVEVITSTASVK 456
>gi|229824053|ref|ZP_04450122.1| hypothetical protein GCWU000282_01357 [Catonella morbi ATCC 51271]
gi|229786407|gb|EEP22521.1| hypothetical protein GCWU000282_01357 [Catonella morbi ATCC 51271]
Length = 440
Score = 178 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/437 (17%), Positives = 176/437 (40%), Gaps = 22/437 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L IP + + + + ++ + ++ GFR GKVP ++YG+
Sbjct: 15 MVAKFEKQATNTGVLTFEIPVEDVKKALDTAFKKVQKRLSVPGFRKGKVPRQIFNNVYGE 74
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + ++ ++ + + + + + P I I + +E L+
Sbjct: 75 AALYEDALNALLPVHLSKAIQEAELEVVTEPKIDIEK---------LEAGQPWVLKAEVV 125
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + L+V +V ++++ ++ VKE +E+GD V +D+
Sbjct: 126 LKPEVKLGDYKGLEVEAQDRQVSDQDVKDELESRRLGLAELVVKEGAAELGDTVVIDFEG 185
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + E +N +GS + LVG K GDQ E++ FPE + ++L G++
Sbjct: 186 FLGDQAFEGGKGENHSLELGSNSFIPGFEDQLVGTKAGDQVEVKVTFPEAYHAENLKGQE 245
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ EV + ++++ A ES + + ++++ + ++ V+
Sbjct: 246 AVFKVTVHEVKAKELPELDDEFAKDVDSEVESLAELENKIRVQLEESKKTAAKEVVEDLA 305
Query: 298 LDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
L ++PE +VE+E N + + Q + E +
Sbjct: 306 LRQAVKNAEIVELPEVMVEDEINRQVSHFTNNLKRQGINEDLYFQITGTNAEGLRAQFAE 365
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ R T +VL I + +I+VT+ E+ + + ++ ++ L
Sbjct: 366 EAELRTKTNLVLEAIVKAEDIQVTDAEIDAEVADLASQYNMSADQVKQFVSTD-----ML 420
Query: 413 RAPIFEDKVIDHILKSV 429
A I K + I+ S
Sbjct: 421 TADIRMKKAMSLIVDSA 437
>gi|282866712|ref|ZP_06275752.1| trigger factor [Streptomyces sp. ACTE]
gi|282558411|gb|EFB63973.1| trigger factor [Streptomyces sp. ACTE]
Length = 460
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 80/425 (18%), Positives = 172/425 (40%), Gaps = 21/425 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + L + +P L DS + + I + +KGFR GK+P I +G+
Sbjct: 1 MKSAVETLNPTRVRLSIEVPFEELKDSLDAAYKKINQQVTVKGFRKGKIPNRVIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L E +++ + + E +++ + +P + I E ++ L D
Sbjct: 61 GAVLEEAVNDALPKFYTEAVNEGELNVLGQPEVDITE---------LKDGELLAFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IEI + ++VT D EV ++E+D+ + ++ + + E + GD VT+D
Sbjct: 112 VRPEIEIPDYSGIEVTVDALEVSDEEVDKAVEQLRERFASTNPVERAAADGDVVTIDLEA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +LED V + +GS +L E + GL+ G E F + GK+
Sbjct: 172 KVDGEVLEDGVAAGVSYTIGSGELLEGIDEAVTGLEAG----GEATFTSELKGGSAEGKE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V S +++D A + F++ + +R ++++ ++ + + ++L
Sbjct: 228 AEVTVKVTAVASRELPELDDDFAQMASEFDTLAELREDSRKRLENTKQYDQATQAQERVL 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQYYHML 353
+ + +PE L+ +E + + + EE
Sbjct: 288 EELLKLAEVPIPEKLLADEVQTRKHNLEHHQLGQMGLTLEKYLEIQGKTLEEFEAETSEQ 347
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + T +L + K + V +EE+ L ++ + + + L
Sbjct: 348 AVKGIKTQFILDELVNKEKLNVNQEELTEHLMRRAASSGMSPDQFAQAVVE-GGQVPMLV 406
Query: 414 APIFE 418
+
Sbjct: 407 GEVAR 411
>gi|269837423|ref|YP_003319651.1| trigger factor [Sphaerobacter thermophilus DSM 20745]
gi|269786686|gb|ACZ38829.1| trigger factor [Sphaerobacter thermophilus DSM 20745]
Length = 519
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 73/439 (16%), Positives = 178/439 (40%), Gaps = 23/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + LD++ + + + + + I GFRPGK P ++ G+
Sbjct: 1 MRVSVEKLPQSSVRLDIVADPDEFNQALDRAFRRVNQQVRIPGFRPGKAPRFILEQRLGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E EI+ + L + + P + I + + R+
Sbjct: 61 EVLVEEAQREIMDTLYRRALDQENLIPVSDPEVDIYQ------------DEPVGFRVEVQ 108
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + +++ EV + ++D +A++ + N + + D V +
Sbjct: 109 VYPEVDLGDYRAIRLDPREVEVTDADVDEALADVQRANAVWVEPAEKRTPNDGDQVIIDL 168
Query: 180 SVDNVILEDQSK-KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI--KDLA 236
V Q + F++G + LF E E + L G+ E + F E+ ++
Sbjct: 169 EVTRDGEPFQEPLRGADFVLGESSLFPEIEEAIKSLHPGETAEFDITFEENDEKVSPEIR 228
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
G + ++ EV +++DLA + +E+ +R + + + R +
Sbjct: 229 GTTLHYRLTLNEVKERELPELDDDLAKSVGDYETLDELRAAIREDLLRSRALAARAEFYE 288
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYH 351
Q ++ ++ + T ++PE++V ++ + ++++R ++ + + EE +
Sbjct: 289 QAVEALAKQATLEIPEAMVTSQLDREVEQLRTRLTQQGSSLEEYLRFEGQTLEEFKESRR 348
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A RR+ +VL E I++ E++ + + + + E+ + P
Sbjct: 349 EDAVRRLRNTLVLEAFAEAEGIDIGAEDLTAEIERLSNQSQNPEQ--MRQIYSSPYFTDL 406
Query: 412 LRAPIFEDKVIDHILKSVQ 430
L + + + KV++ +++ V
Sbjct: 407 LMSELKDRKVMERLVELVT 425
>gi|309809315|ref|ZP_07703184.1| trigger factor [Lactobacillus iners SPIN 2503V10-D]
gi|325911987|ref|ZP_08174389.1| trigger factor [Lactobacillus iners UPII 143-D]
gi|308170428|gb|EFO72452.1| trigger factor [Lactobacillus iners SPIN 2503V10-D]
gi|325476172|gb|EGC79336.1| trigger factor [Lactobacillus iners UPII 143-D]
Length = 442
Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats.
Identities = 89/455 (19%), Positives = 175/455 (38%), Gaps = 22/455 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EL I + ++ + + ++ + GFR G V YG+
Sbjct: 1 MSAKWEKTGKTTGELTFEISTEEISKGLDIAFKRVKKNLRVPGFRKGHVSRVVFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ +++ +P I E +
Sbjct: 61 EALYEDAVNAVLPVAYANAIAESKAEVVGQPKIMPVSM---------EKGKAWTFKAIVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P++++ + ++V + V K++D ++ + + N +K+ +S GD VT+DY
Sbjct: 112 TKPEVKLGDYKGVEVPKQNKRVLVKDVDAELKKRQEQNAELVLKDGKSAEGDTVTIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD E S KN +GS + L+ GD+ ++ FPED+S KDLAGK+
Sbjct: 172 TVDGTKFEGGSAKNYSLELGSKTFIPGFEDQLLNHVAGDEVDVVVTFPEDYSAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ES ++ +K+ E ++
Sbjct: 232 AHFATKIHEVKSKHLPKIDDEFAKDIDDSVESLDELKEKIKADLKKQKEEAAEDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ N + ++PE+++ + + L++ M + +E+ Q
Sbjct: 292 VKEAVNNASVDEIPEAMINEDVDNQLKQYLGGMQRQGIDPKTYFKLTGTTEEQLRQQLAT 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I NIEVT EE+ + + EK + L
Sbjct: 352 DAPERVKTNLVLEAIVSAENIEVTAEEINQEIKNLATDYNMDEKVVRRTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ I K I ++ + + V +K + S+
Sbjct: 407 KHDISIRKAIKLVVDNAKEVAKKSSTKTATSEDSD 441
>gi|322373760|ref|ZP_08048295.1| trigger factor [Streptococcus sp. C150]
gi|321277132|gb|EFX54202.1| trigger factor [Streptococcus sp. C150]
Length = 427
Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats.
Identities = 88/441 (19%), Positives = 179/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + + I +++ + ++ ++ N GFR G +P + +G+
Sbjct: 1 MSVSFENTATNRGVVTFTIGQDKIQPALDQAFNKVKKNLNAPGFRKGHMPRAVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ I+ +++ +P I + IE D L
Sbjct: 61 EALYDDALNAILPAAYEAAITELGLDVVAQPKIDVKS---------IEKGQDWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+V+ + EV ++++D ++ KN VKE +E GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVSVEVSKEVTDEDVDAKLENERKNLAELVVKEGAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + +N +GS + LVG K GD+ E++ FPED+ DLAGK
Sbjct: 172 GSVDGVEFDGGKGENHSLELGSGQFIPGFEDQLVGSKAGDEVEVKVTFPEDYQATDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DAVFVTKVNEVKAKEVPALDDELAKDLDDEVETLDELKAKYRKELEAAKEIAFDDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
LD ++P +VE+E + + + M + E+ + Y
Sbjct: 292 ALDLAVENAEIVELPAEMVEDEVHRAMNEFMGNMQRQGISPEMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ + + TEEE+Q + + ++
Sbjct: 352 ADADKRVKTNLVIEAVAAAEGFDATEEEIQKEINDLAAEYNMEVSQVSSLLSP-----EM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I S ++
Sbjct: 407 LKHDITMKKAVELITSSAKVK 427
>gi|87301614|ref|ZP_01084454.1| trigger factor [Synechococcus sp. WH 5701]
gi|87283831|gb|EAQ75785.1| trigger factor [Synechococcus sp. WH 5701]
Length = 450
Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats.
Identities = 58/454 (12%), Positives = 170/454 (37%), Gaps = 16/454 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V G + L+V +P R S+ + + + GFR GKVP + G
Sbjct: 6 KVKTSPRPGSRLALEVAVPGGRSQASYEAAVVKLSRSVRLPGFRQGKVPRPVLLQQIGPL 65
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + +++++ + + L + A P + + DL L L D+
Sbjct: 66 RIRATALEDLVDSVWRDALEQEKIEALSSPEL---SEGFEALLERFSPGEDLTLTLELDV 122
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDY 177
P + + L ++ D ++ + + + E + + V
Sbjct: 123 QPTPSLKATKGLTAEAELISYDPARVEEMLEQSRRQLATLVPVEDRPAATGDVAVVAFSG 182
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T +E S ++ + + ++G+ G+++E+ FP+D+ ++ G
Sbjct: 183 TFVDTGAAIEGGSSDAMEVELEERRMIPGFVAGILGMAVGEEREVSCRFPDDYPQEEAQG 242
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE-SAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ + ++KE+ + +++ A + +R ++++ +E R
Sbjct: 243 REASFSITLKELKARELPALDDAFAKEASDKDSLEELRTDLETRLREDAERRARSSRHDA 302
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
+L + + D+PE+L++ E ++++ +++ + + + D + A
Sbjct: 303 LLAALVEQLEVDLPETLIQQEIRSLIEQTASQIAQQGMDVKKLFTPDLVRSLMDSSRPEA 362
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++R+ L + E +I + +++ + + + + +D + +
Sbjct: 363 EQRLRRSFALKALAEAEDIRPEADAIEAKVKEVIQ--GLSDTSSIDPLR----LREAVAE 416
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
+ + +++ + + + ++ + ++
Sbjct: 417 DLLRESLLEWLEANSTLTEKAPEAESAAGADDQA 450
>gi|94989245|ref|YP_597346.1| trigger factor [Streptococcus pyogenes MGAS9429]
gi|118574091|sp|Q1JK21|TIG_STRPC RecName: Full=Trigger factor; Short=TF
gi|94542753|gb|ABF32802.1| trigger factor, ppiase [Streptococcus pyogenes MGAS9429]
Length = 456
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 169/441 (38%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 30 MSTSFENKATNRGVITFTISQDKIKPALDKAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 89
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 90 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGKEWTLSAEVV 140
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V D EV ++++D ++ +N +K+ E+ GD V +D+
Sbjct: 141 TKPEVKLGDYKNLVVEVDASKEVSDEDVDAKIERERQNLAELIIKDGEAAQGDTVVIDFV 200
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K GD+ E+ FPE + +DLAGK
Sbjct: 201 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGK 260
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEF---LVRQKVKR 295
+ +I EV + ++++LA + + ++ + + +
Sbjct: 261 AAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGA 320
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
I ++N D+PE ++ E N + + M + E+ Y
Sbjct: 321 AIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQRQGISPEMYFQLTGTTQEDLHNQYS 380
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E T+ E++ + + ++
Sbjct: 381 AEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATEYNMPADQVRSLLSAD-----M 435
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 436 LKHDIAMKKAVEVITSTASVK 456
>gi|85859379|ref|YP_461581.1| trigger factor, PPIase [Syntrophus aciditrophicus SB]
gi|119371019|sp|Q2LTK6|TIG_SYNAS RecName: Full=Trigger factor; Short=TF
gi|85722470|gb|ABC77413.1| trigger factor, ppiase [Syntrophus aciditrophicus SB]
Length = 443
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 97/447 (21%), Positives = 193/447 (43%), Gaps = 17/447 (3%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
V + +K++L +P + + + A IKGFR GK+P ++ Y K
Sbjct: 8 VKVEEISPVKKKLLFDVPWEDVKRERDTIYRNFSRTAKIKGFRKGKIPRKILELHYKKHA 67
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
ET+ ++ + + L + D RA +P I IE D + ++ P
Sbjct: 68 EEETVSSLVSRLYWDALKEHDIRAISQPE---------IEQQGIEEEKDFSFSATVEVEP 118
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYTVS 180
QI+ + D+ ++++ V E E+D ++ +I K E ++ E GD VT+D+
Sbjct: 119 QIDPQGYLDMTLSKEEQTVTEDEVDGRLEDIRKMFGTLEEVTEDREIRKGDFVTIDFEGF 178
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS-IKDLAGKK 239
+D E+ + + +GS + + L+G K G KEI+ FPE++ ++AGK
Sbjct: 179 IDGQNPEEMKRNDYFLEIGSNTMVPGFEDQLLGEKVGTIKEIKIIFPENYQINSNVAGKD 238
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+IK + ++ + +ES ++ + + + + + ++I+
Sbjct: 239 ATFKVTIKNLKEKKLPELDENFVKNFDKYESLDDLKEDVRKSLFEDHKRKTEADMSKKIM 298
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + FD P S VE + ++ + R + + +D + Y A R V
Sbjct: 299 DKLLEMNDFDAPSSYVERQIFFMMMEARKRLITTGMDPAMIDQVSASWHDKYKDEATRIV 358
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ ++L +I +K +I+VT+EE + L + ++ +K+ D F + +R I
Sbjct: 359 KSSLLLKSIAQKESIDVTDEEFEERLREIARQYSQDYEKIKDSF--NEDMKENVRNDILN 416
Query: 419 DKVIDHILKSVQIV--DRKVTFDQLFD 443
KV D I + +++ T + +
Sbjct: 417 KKVFDFIESKASVSMIEKEKTSPEEAN 443
>gi|239623655|ref|ZP_04666686.1| trigger factor [Clostridiales bacterium 1_7_47_FAA]
gi|239521686|gb|EEQ61552.1| trigger factor [Clostridiales bacterium 1_7_47FAA]
Length = 428
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 75/439 (17%), Positives = 182/439 (41%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L + + + + D+ + ++K NI GFR GK P + I+ +YG+
Sbjct: 1 MSVQVEKLEKNMAKLTIEVDAAQFEDAMKKAFNKNKNKFNIPGFRKGKAPRAMIEKMYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + DE I + + + RP + + + D
Sbjct: 61 GIFYEDAADEAINATCMQAMDESGLEIVSRPEVAVEQIGKD---------KPFIYTALVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++ + + ++V + V ++++ ++ ++ + N V++ GDK +D+
Sbjct: 112 VRPEVTLGEYKGIEVEKADAAVTAEDVEAELKKVQEQNARLLSVEDRPVADGDKTVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + + + +GS E LVG G++ E+ FPE++ +LAGK
Sbjct: 172 GFVDGKPFDGGKATDYELTIGSHSFIDTFEEQLVGKNIGEECEVNVTFPEEYHAPELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++KE+ ++++ A FE+ + KI + + + + ++
Sbjct: 232 PATFKVTVKEIKVKELPALDDEFAGEVSEFETMDEYKKDIEAKILERKQKEAATENENRV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+D ++ + ++P+ +VE++ + ++Q M + +
Sbjct: 292 VDRVAANASLEIPDKMVESQIDNMVQDTARRMQGQGLSMDMYMKYTGMTMDTMRDQMRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL + + +I+V++E + L + + K+ ++ +++
Sbjct: 352 ALKRIQTRLVLEEVVKAEDIQVSDERLDEELAKMAAAYQMEVDKLKEYMSDRD--KEQMK 409
Query: 414 APIFEDKVIDHILKSVQIV 432
+ + +D ++ ++V
Sbjct: 410 EDLAVQEAVDFLVAEAKLV 428
>gi|237739235|ref|ZP_04569716.1| trigger factor [Fusobacterium sp. 2_1_31]
gi|229422843|gb|EEO37890.1| trigger factor [Fusobacterium sp. 2_1_31]
Length = 429
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 84/440 (19%), Positives = 179/440 (40%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K E E+ + + + ++ ++ ++ + A + GFR G P + + Y
Sbjct: 1 MKYEVKKLEKSAVEVKLHLDAAEVSPLVDKVLKHVGEHAEVAGFRKGHAPKEALMANYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I S+ ++ I PEI+ K + I DL L D+
Sbjct: 61 HIESDVANDAINAYFPEIVEKEKLEPVSY-----------VRLKEIALKDDLDLTFDIDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDY 177
P+ + ++ L+ + E+ + ++ ++ + +N+ E ++++ D V + +
Sbjct: 110 YPEFTLGNYKGLEAEKKTFEMTDDLLNTELEMMQRNHSKLVEVEDPSYKAQLEDTVDLAF 169
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D V ++ +GS E LVG G + EI FPE++ +LAG
Sbjct: 170 EGFMDGVPFPGGKAESHLLKLGSKSFIDNFEEQLVGYTKGQEGEITVKFPEEYHAPELAG 229
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + I + +N++ A LG+ES ++ ++ + + + +
Sbjct: 230 KPAQFKVKINAIKQLKEPELNDEFAKELGYESLEDLKNKTKEETIKRENDRIENEYIGAL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
LD + T DVP S+V+ E L+++ +++S K + + +
Sbjct: 290 LDKLMETTTIDVPVSMVQAEIQNRLKELEYQLSMQGFKMDDYLKMMGGNIDTFAAQLTPA 349
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LA 410
A+++V ++L I +N E +EEE+ + + + + +K N A
Sbjct: 350 AEKKVKVDLILDKIARENKFEASEEELNGRMEEIAKMYGMDVPTLEGELKKNNNLDNFKA 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++ I K ID ++K+ +
Sbjct: 410 SVKYDIVMKKAIDEVVKNAK 429
>gi|242279533|ref|YP_002991662.1| trigger factor [Desulfovibrio salexigens DSM 2638]
gi|259533569|sp|C6BVE8|TIG_DESAD RecName: Full=Trigger factor; Short=TF
gi|242122427|gb|ACS80123.1| trigger factor [Desulfovibrio salexigens DSM 2638]
Length = 435
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 88/436 (20%), Positives = 190/436 (43%), Gaps = 13/436 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++RE+ V +P+ + + + + + + +KGFR GKVP S I+S Y K
Sbjct: 1 MDFNIEEVSAVEREIKVSVPAEEVGAALDATVALYKVQTPVKGFRKGKVPASVIQSKYKK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I++E ++I + +IL+ + + D+ + + D + ++I
Sbjct: 61 QIINEATTDLINYQINDILNGQSLVPVSK---------IDVDAKELVRGEDFSYVIKFEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYT 178
+P+ + + L V ++ EV E E+ + ++ + ++ G+ +V ++
Sbjct: 112 VPEFDTPGYLGLPVEEERAEVTEDELKEVENRLLQSMAKIAPIEDDRPAKDGELASVTFS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + N +G E E + LK G+ E + FPED DLAGK
Sbjct: 172 AEMDGEPIPGVQADNFDLPIGEGHSLEEFEEFVKTLKAGESGETDITFPEDFINSDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ V + +D+ + GFES MR + Q + + L + + ++
Sbjct: 232 TATMKVTVHAVKERKMPELTDDVVKQAGGFESVEKMREIVKQSYTANRKQLNKSAAQTKL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ I + F +P SL+E+ ++ V + + +++ EE + +A+
Sbjct: 292 ISGIVKELDFPLPPSLMEDRLQRMVADVIGRAERSGKSFESLGKSMEELREEQRPVAEES 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V T I L + ++ + V +E++ ALYQ + + ++++ N + L+ +
Sbjct: 352 VRTEIFLLNVAKREELSVEPQEVEGALYQIAQQTQQDLSSVKSYYEEN-NLIVPLKDRLL 410
Query: 418 EDKVIDHILKSVQIVD 433
DK + I ++ + +
Sbjct: 411 ADKAAEFIYENADVTE 426
>gi|320106220|ref|YP_004181810.1| trigger factor [Terriglobus saanensis SP1PR4]
gi|319924741|gb|ADV81816.1| trigger factor [Terriglobus saanensis SP1PR4]
Length = 471
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 88/439 (20%), Positives = 177/439 (40%), Gaps = 27/439 (6%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSET 66
+ L RE+ V P+ +T +F + ++ + +A I GFR GKVP S I+S +GK + E
Sbjct: 40 LNPELTREIVVEAPAEDVTAAFAKVLKTYQKQARIPGFRAGKVPPSMIRSRFGKELRQEV 99
Query: 67 IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEI 126
++ ++ E L + +P IT ++ L+ R S+++LP+ ++
Sbjct: 100 MESLVSERFRTELEAQKLNPISQPQIT---------ELMLVDGQPLRFRASFEVLPEFDV 150
Query: 127 SSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV------------- 173
+ ++ ++ + V ++E ++ + + E E E E+ D
Sbjct: 151 TGYESIKAEKADVTVTDEEYQAELDYLLDQHSTVETVEEERELHDGDWAEIEFKGTVKDL 210
Query: 174 --TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
TV + +V +G + TE L G K G + E +P D
Sbjct: 211 AQTVTEEGLASTSAEPPITGDDVLVEIGGKNTLPAFTEALRGSKVGQELSAEVEYPADFG 270
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVR 290
LAGK V + ++K + P + + + +ES + ++ +
Sbjct: 271 EARLAGKTVEYDVTVKAIKKKTPPAQDAEFVSQLGNYESWEDFTTKFRENVEGRKRTSLE 330
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-EEDLQY 349
K +++D + K+ F VPES V+ + + L + ++ + + +D
Sbjct: 331 NASKEKLVDQLVAKFQFPVPESFVQQQIDARLDRGLRALAQQGMPPEEMRKLDFGRLRAA 390
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A V +VL I EK NI V++ ++ L+ + +++ + K L
Sbjct: 391 QRDEAVNEVKASMVLDKIAEKENITVSDADLDRELFILSIQSREPVEQLRERLTK-EGNL 449
Query: 410 AELRAPIFEDKVIDHILKS 428
A +R + +K + +
Sbjct: 450 ARIREQMLREKTGTALYEK 468
>gi|284047882|ref|YP_003398221.1| trigger factor [Acidaminococcus fermentans DSM 20731]
gi|283952103|gb|ADB46906.1| trigger factor [Acidaminococcus fermentans DSM 20731]
Length = 438
Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats.
Identities = 91/448 (20%), Positives = 180/448 (40%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + +G + L V +P + +F + + I + I GFR GK P ++ GK
Sbjct: 1 MSVSVE-RKGNEATLKVTLPVEDVAKAFEKAVAKINKQVTIPGFRKGKAPRRVLEMHVGK 59
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+I E + E L + P I E +++ L
Sbjct: 60 DAIKEEAFEIAANSEYRETLKENKWVPVSDPEI---------KDSKFEEGQPMEMTLVVT 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDY 177
+ P+ E+ + DL V +D E+ + ++D+++ + K E GD +D+
Sbjct: 111 LRPEPELGQYKDLDVAKDEKEITDADVDKEVENLQKRASKMVEAPEGKALEKGDLAIIDF 170
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
++D E K VGS + LVGLK G+ ++ FPED+ K+LAG
Sbjct: 171 AGTIDGEAFEGGEGKGYPLEVGSGSFIPGFEDQLVGLKKGESTDVNVTFPEDYFSKELAG 230
Query: 238 KKVRLNFSIKEVFSPLPVVVNND-LAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
KK ++++V V ++ +A ++ + R ++K+ + +
Sbjct: 231 KKAVFKVNVQDVKVKEVPEVTDELIAANSDSKTVAEFREKTMDRLKKAEAQRAQSDYETN 290
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
++ F+VP+ +V N ++ ++ + + Q + +
Sbjct: 291 LIKKAVENAKFEVPDVMVTQRANQMMDELAMNLEAHKMSLPLYLQYLGKDVKTYRDEQKP 350
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
+A + T +VL I K +I+VTE+E++S + Q K++ ++ +LA L
Sbjct: 351 VALENIKTDLVLDAIALKEDIKVTEDEIRSEMEQLGAMHGATLKQVEKIVKEN-GSLAVL 409
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
+ I K ++ S + + ++
Sbjct: 410 VSNIARRKAARVVIDSAKNAPKAEAAEE 437
>gi|146295914|ref|YP_001179685.1| trigger factor [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|166229027|sp|A4XHV9|TIG_CALS8 RecName: Full=Trigger factor; Short=TF
gi|145409490|gb|ABP66494.1| trigger factor [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 438
Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats.
Identities = 93/441 (21%), Positives = 200/441 (45%), Gaps = 17/441 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K ++V + + + + I GFRPGK P S I+ YG+
Sbjct: 1 MEFKVEKKGTNKAVIEVEVEPEKFEEGLQKSYLKNAKYFKIPGFRPGKAPRSLIERAYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ID ++ E P+++ + RP + I + +
Sbjct: 61 EVFYDDAIDYVLNETYPKVIEESKLEVVSRPEVDIVQVG---------KGKSFIYKAEVY 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+ + + +++ + V E+E++ ++ + + N F + E + GD VT+D+
Sbjct: 112 IKPEFGLGEYKGVEIKKIEYPVAEEEVEHELEHLREENARFISVDREVQNGDIVTIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +E+ S ++ + +GS E L+G+K G++KEIE FPED+ ++LAGKK
Sbjct: 172 FVDGESIENGSAQDYELTIGSGRFIPGFEEQLIGIKKGEEKEIEVVFPEDYQSQELAGKK 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+KE+ ++++ A +E+ ++ +IK+ ++ + ++ IL
Sbjct: 232 ATFKVKVKEIKVKELPELDDEFAKDVSEYETLEELKASIRNRIKEKNDKRAKDEMIDAIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
+ I+ D+PE ++EN+ N ++ V + + + D+E + + A
Sbjct: 292 EKIAQATEIDIPEPMIENQINYYVEDVVRNLQYFGMTYEKYLEAIGKTDKEFREQFRERA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + ++L I + NI+ T+EE++ L + + +K+ + + + ++
Sbjct: 352 TKAIRNNLILEKIAKVENIQATDEELEKELERLAKMYNLEVEKLKERLSEDD--IEYIKE 409
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
I +K ID I ++ +I+ +
Sbjct: 410 GIILNKAIDFIYENAKIISEE 430
>gi|116494826|ref|YP_806560.1| trigger factor [Lactobacillus casei ATCC 334]
gi|191638333|ref|YP_001987499.1| trigger factor [Lactobacillus casei BL23]
gi|122263756|sp|Q039K4|TIG_LACC3 RecName: Full=Trigger factor; Short=TF
gi|238693034|sp|B3WE40|TIG_LACCB RecName: Full=Trigger factor; Short=TF
gi|116104976|gb|ABJ70118.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Lactobacillus casei ATCC 334]
gi|190712635|emb|CAQ66641.1| Trigger factor (TF) [Lactobacillus casei BL23]
gi|327382361|gb|AEA53837.1| Trigger factor [Lactobacillus casei LC2W]
gi|327385561|gb|AEA57035.1| Trigger factor [Lactobacillus casei BD-II]
Length = 445
Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats.
Identities = 84/461 (18%), Positives = 184/461 (39%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EL I ++ ++ + +R + GFR GKV + K +YG
Sbjct: 1 MSAKWEKKGTNDGELTFEIDLPQIQQGLDQAFQRVRKNLTVPGFRKGKVSRTVFKRMYGD 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + ++ ++ + + + +P I ++ + ++ +
Sbjct: 61 AALYEDALNILLPDAYEAAVKESGIDPVDQPQINVDSM---------DEGKPWVIKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++ + + L+V + EV K+ID ++ + + VK+ ++ D V +DY
Sbjct: 112 VKPEVTLGQYKGLEVPKQNVEVSAKDIDAELEKRREQQAELVVKDDKAAENGDTVVIDYV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + S KN +GS E LVG K+GD+ + FPED+ DLAGK
Sbjct: 172 GTIDGTEFDGGSSKNYSLELGSNSFIPGFEEQLVGHKSGDEVTVNVTFPEDYKAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVV--NNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I EV + + + ++ ++ +++ E + V+
Sbjct: 232 AAEFKTTIHEVKVKELPALDDDFAKDLDDDVDTLDELKAKIKKELTDQREEAAKNAVQEA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++ T +VP +++E E + + + M + +++ + +
Sbjct: 292 AIKEATDNATIKEVPNAMIEQEVHNQMDQYLGNMQRQGISPKMYYQLTGTSEDDLHKQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A RV T +VL I + +I+ TE+++ + + EK + +
Sbjct: 352 ADAATRVRTNLVLEAIVKAEDIQPTEDQVNEEVKNLASEYNMDEKAVRKALSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
L+ I + ID I S + + + D +S++ +K
Sbjct: 407 LKHDIGVKQAIDIITDSAK--EVESAKDDADKEASDAKADK 445
>gi|312873982|ref|ZP_07734018.1| trigger factor [Lactobacillus iners LEAF 2052A-d]
gi|311090531|gb|EFQ48939.1| trigger factor [Lactobacillus iners LEAF 2052A-d]
Length = 442
Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats.
Identities = 89/455 (19%), Positives = 175/455 (38%), Gaps = 22/455 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + EL I + ++ + + ++ + GFR G V YG+
Sbjct: 1 MSAKWEKTGKTTGELTFEISTEEISKGLDIAFKRVKKNLRVPGFRKGHVSRVVFDQFYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ +++ +P I E +
Sbjct: 61 EALYEDAVNAVLPVAYANAIAESKAEVVGQPKIMPISM---------EKGKAWTFKAIVS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P++++ + ++V + V K++D ++ + + N +K+ +S GD VT+DY
Sbjct: 112 TKPEVKLGDYKGVEVPKQNKRVLVKDVDAELKKRQEQNAELVLKDGKSAEGDTVTIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD E S KN +GS + L+ GD+ ++ FPED+S KDLAGK+
Sbjct: 172 TVDGTKFEGGSAKNYSLELGSKTFIPGFEDQLLNHVAGDEVDVVVTFPEDYSAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV S ++++ A ES ++ +K+ E ++
Sbjct: 232 AHFATKIHEVKSKHLPKIDDEFAKDIDDSVESLDELKEKIKADLKKQKEEAAEDAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ N + ++PE+++ + + L++ M + +E+ Q
Sbjct: 292 VKEAVNNASVDEIPEAMINEDVDNQLKQYLGGMQRQGIDPKTYFKLTGTTEEQLRQQLAT 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I NIEVT EE+ + + EK + L
Sbjct: 352 DAPERVKTNLVLEAIVSAENIEVTAEEINQEIKNLATDYNMDEKVVRRTLSDD-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ I K I ++ + + V +K + S+
Sbjct: 407 KHDISIRKAIKLVVDNAKEVAKKSSTKTATSEDSD 441
>gi|167761296|ref|ZP_02433423.1| hypothetical protein CLOSCI_03701 [Clostridium scindens ATCC 35704]
gi|167660962|gb|EDS05092.1| hypothetical protein CLOSCI_03701 [Clostridium scindens ATCC 35704]
Length = 428
Score = 177 bits (448), Expect = 4e-42, Method: Composition-based stats.
Identities = 86/436 (19%), Positives = 184/436 (42%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + +P++ L + ++K ++ GFR GKVP I+ +YG
Sbjct: 1 MSLQVEKLEKNMAKLTIEVPADDLEKALQSAYMKQKNKISLPGFRKGKVPRQMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + +E+I + E + + RP I + + IE
Sbjct: 61 EIFYDDAANELIPKAYAEAYDEAELDIVSRPQINVVQ---------IEKGKPFIFTADVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
P++ + + L++ + V +KE+D ++ E A+ N V + + GD+V +D+
Sbjct: 112 TKPEVTLGEYKGLEIEKVSTRVTQKEVDAKIQEEAEKNARTITVTDRPVQDGDEVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N +GS E LVG + + E++ FPED+ +DL GK
Sbjct: 172 GFVDGVAFEGGKGENYPLTIGSGSFIPGFEEQLVGAEAEKEMEVKVTFPEDYHAEDLKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +I E+ + ++++ A F++ + KIK ++K + Q
Sbjct: 232 EAVFKCTIHEIKAKELPEIDDEFAAEVSEFDTLEEYKADIKAKIKDQKASEGKRKQEDQA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+D + +++P+ ++E + + + S + ++ +
Sbjct: 292 VDAVVKNAQYEIPQPMIETQVMQMADDFAQRIQSQGISLEQYFQFTGMTADKMMDELRPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I + NIE+++E++ L + + K+ + N +++
Sbjct: 352 AIKRIETRLVLEAIAKAENIEISDEKLDEELAKMAESYKMEVDKLKEFM--DENEKKQMK 409
Query: 414 APIFEDKVIDHILKSV 429
+ + I ++++
Sbjct: 410 EDMAVQEAITFLIENA 425
>gi|319937423|ref|ZP_08011830.1| trigger factor [Coprobacillus sp. 29_1]
gi|319807789|gb|EFW04382.1| trigger factor [Coprobacillus sp. 29_1]
Length = 426
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 93/439 (21%), Positives = 194/439 (44%), Gaps = 22/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E E+ V + ++ + +E + I GFR GK P+ +KS GK
Sbjct: 1 METVCNKLEKCMMEVKVTFTTEEWKNAQEKALEKLAKNVKIDGFRQGKAPMKMVKSRVGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+IL E D ++K+ IL + + +P + I+E D+ LK+ ++
Sbjct: 61 AAILEEATDVVLKKSYAAILLDNNIQPVGQPQVQIDELTEDV----------LKVTVTAP 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++ + + L+V + +V +KEI+ ++A +KE + D +D+
Sbjct: 111 VAPEVTLGQYKGLEVKKGTVKVTKKEIEAELANYQNQFAELVIKEEGTVENGDTAVIDFE 170
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E +VG+K G++KEI FPE++ +LAG+
Sbjct: 171 GFKDGVAFEGGKAENHSLEIGSGSFIPGFEEQVVGMKVGEEKEIHVTFPEEYQSAELAGQ 230
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG---FESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ + E+ + + ++++LA + E+ + + ++IK + V K
Sbjct: 231 EAVFKVKVHEIKTKVLPDIDDELAKDVNIDGIETLADLETYTKEQIKNKKQTEVESKFSD 290
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYH 351
I + + +VPE+++E E +L++V +S + E+
Sbjct: 291 DIFNAVIENTPLEVPEAMIETETQTMLREVEQNLSQQGLNMELFQQLTGKTMEDMKAEMS 350
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++RV ++L I + NIE+++EE+ + + + ++ F + +
Sbjct: 351 EQAEKRVKFNLILAEIAKAENIEISDEEVDDEIKEIATYYGREFDEVKTIF---EAQMGQ 407
Query: 412 LRAPIFEDKVIDHILKSVQ 430
+++ + K + I +V+
Sbjct: 408 IKSDLATRKAVQLIKDNVK 426
>gi|239631582|ref|ZP_04674613.1| trigger factor [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066386|ref|YP_003788409.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Lactobacillus casei
str. Zhang]
gi|239526047|gb|EEQ65048.1| trigger factor [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438793|gb|ADK18559.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Lactobacillus casei str. Zhang]
Length = 445
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 84/461 (18%), Positives = 184/461 (39%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EL I ++ ++ + +R + GFR GKV + K +YG
Sbjct: 1 MSAKWEKKGTNDGELTFEIDLPQIQQGLDQAFQRVRKNLTVPGFRKGKVSRTVFKRMYGD 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + ++ ++ + + + +P I ++ + ++ +
Sbjct: 61 AALYEDALNILLPDAYEAAVKESGIDPVDQPQINVDSM---------DEGKPWVIKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++ + + L+V + EV K+ID ++ + + VK+ ++ D V +DY
Sbjct: 112 VKPEVTLGQYKGLEVPKQDVEVSAKDIDAELEKRREQQAELVVKDDKAAENGDTVVIDYV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + S KN +GS E LVG K+GD+ + FPED+ DLAGK
Sbjct: 172 GTIDGTEFDGGSSKNYSLELGSNSFIPGFEEQLVGHKSGDEVTVNVTFPEDYKAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVV--NNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I EV + + + ++ ++ +++ E + V+
Sbjct: 232 AAEFKTTIHEVKVKELPALDDDFAKDLDDDVDTLDELKAKIKKELTDQREEAAKNAVQEA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++ T +VP +++E E + + + M + +++ + +
Sbjct: 292 AIKEATDNATIKEVPNAMIEQEVHNQMDQYLGNMQRQGISPKMYYQLTGTSEDDLHKQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A RV T +VL I + +I+ TE+++ + + EK + +
Sbjct: 352 ADAATRVRTNLVLEAIVKAEDIQPTEDQVNEEVKNLASEYNMDEKAVRKALSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
L+ I + ID I S + + + D +S++ +K
Sbjct: 407 LKHDIGVKQAIDIITDSAK--EVESAKDDADKEASDAKADK 445
>gi|56964402|ref|YP_176133.1| trigger factor [Bacillus clausii KSM-K16]
gi|67461672|sp|Q5WEN8|TIG_BACSK RecName: Full=Trigger factor; Short=TF
gi|56910645|dbj|BAD65172.1| trigger factor [Bacillus clausii KSM-K16]
Length = 434
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 83/443 (18%), Positives = 196/443 (44%), Gaps = 18/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + +E L + + ++++ D+ ++ + + K N+ GFR GKVP + +G
Sbjct: 1 MSAKWEKTEENTGVLTIEVEADKVNDALDKAFKKVVKKVNVPGFRKGKVPRGLFEKQFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ID ++ E + + RP I + I L ++ +
Sbjct: 61 ESLYQDAIDILLPEAYANAVEETGIYPVDRPEIDVES---------IGKNEPLIVKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++++ + L+V +V +++++ ++ ++ + + V +E E GD +D+
Sbjct: 112 VKPEVKLGDYKGLEVEVPSTDVTDEDVEAELKKLQEQHAELVVLEEGEIANGDTAVIDFA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +N +GS E LVGLK+G++K++E FPE++ ++LAGK
Sbjct: 172 GYVDGEAFEGGTAENYSLEIGSNSFIPGFEEQLVGLKSGEEKDVEVTFPEEYHAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ ++++ A E+ ++ +++ + V+
Sbjct: 232 PATFKVKVHDIKRKELPELDDEFAKDVNEKVETLDELKNELRSTLEEQKKTASENAVRDS 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+L+ + + +VPE+++E E + +LQ+ + + +E+ +
Sbjct: 292 LLEKAAEQAEINVPEAMIETETDRMLQEFGQRLQAQGMNLDMYFQFSGQTEEDMRNQFKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV + L I E N+EV+EEE++ + + ++ + +
Sbjct: 352 DAEKRVRVNLTLEAIAEAENVEVSEEEIEEEFQKMADMYQRSVEE-IKALLAAQGGTDNV 410
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
+ + K ID ++++ + V +
Sbjct: 411 KGDLKLRKAIDVLVENSKEVTTE 433
>gi|20807118|ref|NP_622289.1| trigger factor [Thermoanaerobacter tengcongensis MB4]
gi|23822231|sp|Q8RC26|TIG_THETN RecName: Full=Trigger factor; Short=TF
gi|20515612|gb|AAM23893.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Thermoanaerobacter tengcongensis MB4]
Length = 432
Score = 177 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 85/442 (19%), Positives = 190/442 (42%), Gaps = 18/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E L++ IP + + + + SK N+ GFR GK P ++ YG+
Sbjct: 1 MGASLKKIEKSVATLELTIPKEKFEEGLDYAFKKNASKFNVPGFRKGKAPRFLVERYYGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I+ + E E L + P I I + I DL L +
Sbjct: 61 GVLYEDAIEYVFHEAYQEALKTFNLEPVDYPDINILQ---------IGKGKDLVLEATVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYT 178
++P++E+ + +++ + +V + +++ ++ ++ + N E +E GD +D+
Sbjct: 112 VMPEVELGEYKGIEIEKIEYDVYDGDVEYELEKLRQQNARIIPVEGRPAEQGDIAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D+ E +N + +GS + ++ G+ ++ FPED+ +++L GK
Sbjct: 172 GYIDDKPFEGGKGENYELELGSNTFVPGFEDQIISHNVGETFDVTVTFPEDYRVEELKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A FE+ ++ +K+++ ++ ++K +
Sbjct: 232 TAVFKVTLKALNKKELPELDDEFAKDVSEFETLEELKQDIRKKLEEKNKREAENEMKEKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHML 353
+ + D+P+ +VE + + L+ + + + N ++ +
Sbjct: 292 VMKVVENAKVDIPDVMVERQIDLSLRDLDYNLRLQGLDLNTYLSITGKTIQDLRKEMWEG 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A RV T +V+ I + NIE TEEE+++ L + + + ++ + + ++
Sbjct: 352 ALNRVKTQLVIDKIAKVENIEATEEELENKLKELAESYRVNLEEFKKSL--TESQINGIK 409
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I K ID I +IV ++
Sbjct: 410 EDIAYYKTIDFIFNQCKIVSKE 431
>gi|119510659|ref|ZP_01629788.1| trigger factor [Nodularia spumigena CCY9414]
gi|119464710|gb|EAW45618.1| trigger factor [Nodularia spumigena CCY9414]
Length = 473
Score = 177 bits (447), Expect = 5e-42, Method: Composition-based stats.
Identities = 78/485 (16%), Positives = 189/485 (38%), Gaps = 33/485 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+V ++ + L++ I ++ + I+++ S I GFR GKVP + G
Sbjct: 1 MKVTQEKLPASQIGLEIEITPEITQKTYEQVIKNLASTTTIPGFRKGKVPRPILLQRLGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + ++EI+++ V + L + + A +P + + E L + D
Sbjct: 61 ARIKAAALEEIVQDGVEKALKQEEIPAIGQPQL---RTSFEELISNYEPGKPLTFLAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV---- 175
+ P++ + + L + + D +D + + + E + V V
Sbjct: 118 VQPEVNLVQYTGLSAKAEEIKHDTNRVDEVLKKEREELATLIPVEGRAAQIGDVAVVDFK 177
Query: 176 -------DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPE 228
+ + + + + + +VG+ + +EI FP+
Sbjct: 178 GVLAKGEGEDETAEPTPIPGAEATDFKLELEEDKFIPGFVSGMVGMNPEETREIPAQFPD 237
Query: 229 DHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEF 287
++ ++LAGK ++KE+ +N+D A F++ +R ++ ++ +E
Sbjct: 238 PYANEELAGKAAVFTVTLKELKEKELPELNDDFAQEVSDFDTLEELRASLAESHQKEAEE 297
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EE 345
+ + +L + D+PE+L++ E + +L + +S + + + D +
Sbjct: 298 KTKSNQQEALLAELLKYIEVDLPETLIDREIDAMLNQTAMRLSQQGLDVRKLFTEDIIPQ 357
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ A R+ + L + ++ +IEVT EE+ + + + + ++ +
Sbjct: 358 LRERSRDEAIERLKRSLGLLEVSKRESIEVTPEEVAARVAELMEQYADQDIDA------- 410
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ + + +K++D +L+ + +L S S E+ +S E
Sbjct: 411 DRMRSVVENEMLTEKIVDWLLEHSSV--------ELVPEGSLSPAEETAGESETTEPQSE 462
Query: 466 EEAPS 470
E+ +
Sbjct: 463 AESAA 467
>gi|218133243|ref|ZP_03462047.1| hypothetical protein BACPEC_01108 [Bacteroides pectinophilus ATCC
43243]
gi|217992116|gb|EEC58120.1| hypothetical protein BACPEC_01108 [Bacteroides pectinophilus ATCC
43243]
Length = 429
Score = 177 bits (447), Expect = 5e-42, Method: Composition-based stats.
Identities = 79/437 (18%), Positives = 174/437 (39%), Gaps = 19/437 (4%)
Query: 1 MQVIEKFSE-GLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M + E +L + + +SK N++GFR GK P I+ YG
Sbjct: 1 MSFTVEQLEEKNMVKLVITSSDEEFEKGLEQAYNKNKSKINVQGFRKGKAPRKIIEKFYG 60
Query: 60 KSI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
K + + + II E + + +P I + + +E +
Sbjct: 61 KEVFFEDAANAIIPEAYAKAAEESGLEIVSQPEIGLVQ---------LEDGKPFIFSATV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDY 177
+ P++E+ + ++V + EV E +I+ ++ ++ + N ++ + D +D+
Sbjct: 112 AVKPEVELGQYKGVEVAKADVEVTEDDINAELDKVREQNSRTVNVEDRPVQDKDMTVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D + +N +GS E L+G G++ E+ FPED+ ++L G
Sbjct: 172 EGFIDGQPFQGGKGENYPLTIGSHSFIDTFEEQLIGKNIGEETEVNVTFPEDYHAEELKG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K ++KE+ +++D A F++ + + + I + + K + +
Sbjct: 232 KPATFKVTVKEIKEKQYDDLDDDFAQNVSDFDTLAEYKEDLKKTIGERKANEAKNKKEAE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
+D I D+P ++V+ + + + + + ++
Sbjct: 292 AIDKIIENAKMDIPSAMVDTQVRQMAEDFSRRLQQQGLSVEQYFQFTGLTADKLFADMQP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++R+ + +VL I + NIEV++EE +S L + + K+ + +Y ++
Sbjct: 352 EAEKRIKSRLVLEAIVKAENIEVSDEEYESELNKMAESYGMEVDKIKEFMGEYEQ--KQI 409
Query: 413 RAPIFEDKVIDHILKSV 429
R I K +D ++
Sbjct: 410 REDIAVQKAVDLVVAEA 426
>gi|306826660|ref|ZP_07459963.1| trigger factor [Streptococcus pyogenes ATCC 10782]
gi|304431108|gb|EFM34114.1| trigger factor [Streptococcus pyogenes ATCC 10782]
Length = 440
Score = 177 bits (447), Expect = 5e-42, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 168/441 (38%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 14 MSTSFENKATNRGVITFTISQDKIKPALDKAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 73
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 74 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGKEWTLSAEVV 124
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + + V D EV ++++D ++ +N +K+ E+ GD V +D+
Sbjct: 125 TKPEVKLGDYKNRVVEVDASKEVSDEDVDAKIERERQNLAELIIKDGEAAQGDTVVIDFV 184
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K GD+ E+ FPE + +DLAGK
Sbjct: 185 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGK 244
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEF---LVRQKVKR 295
+ +I EV + ++++LA + + ++ + + +
Sbjct: 245 AAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGA 304
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
I ++N D+PE ++ E N + + M + E+ Y
Sbjct: 305 AIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQRQGISPEMYFQLTGTTQEDLHNQYS 364
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E T+ E++ + + ++
Sbjct: 365 AEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATEYNMPADQVRSLLSAD-----M 419
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 420 LKHDIAMKKAVEVITSTASVK 440
>gi|153814155|ref|ZP_01966823.1| hypothetical protein RUMTOR_00364 [Ruminococcus torques ATCC 27756]
gi|317499956|ref|ZP_07958192.1| hypothetical protein HMPREF1026_00134 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087821|ref|ZP_08336746.1| trigger factor tig [Lachnospiraceae bacterium 3_1_46FAA]
gi|145848551|gb|EDK25469.1| hypothetical protein RUMTOR_00364 [Ruminococcus torques ATCC 27756]
gi|316898673|gb|EFV20708.1| hypothetical protein HMPREF1026_00134 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330409516|gb|EGG88957.1| trigger factor tig [Lachnospiraceae bacterium 3_1_46FAA]
Length = 429
Score = 177 bits (447), Expect = 5e-42, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 180/437 (41%), Gaps = 19/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + +P+ + + R K ++ GFR G+VP I+ +YG
Sbjct: 1 MSLQVERLEHNMAKLTIEVPAEEVEKALQAAYLKERGKISLPGFRKGRVPRQMIEKMYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E + +I E + + + +P I I + +E +
Sbjct: 61 EVFYDEAANRMISEAYAKAYDECELELVSQPKIEITQ---------LEKGKEFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++++ + L+V + V +KE+D ++ + + N + + D++T+D+
Sbjct: 112 VKPEVKLGEYKGLKVDKVSTRVTQKEVDEEIDKERERNARTIDVTDRAVQDKDQITLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E + +GS + L+G ++KEI FPE++ K+LAGK
Sbjct: 172 GFVDGVAFEGGKASDYPLTIGSGAFIPGFEDQLIGANIDEEKEINVTFPEEYQAKELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLA--VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ + + ++++ V E+ A + KIK+ E +QK + Q
Sbjct: 232 AAVFKCTVHSIKAKELPELDDEFVSDVSEKSETVDAYKAEVKAKIKERKENEGKQKREDQ 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
++ D+PE+++ + ++ + + +E+ ++ +
Sbjct: 292 SVEQAVANAEMDIPEAMISFQSRQMVDDFARRIMQQGMTMEQYFQFTGLSEEKMMEEFKP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++R+ T + L I NIEV+EE + L + + K+ ++ + ++
Sbjct: 352 EAEKRIRTRLTLEAIVAAENIEVSEERLDEELQKMADSYKMEVDKLKEYMGENE--KKQM 409
Query: 413 RAPIFEDKVIDHILKSV 429
+ I + + I +
Sbjct: 410 KEDIAIQEAVTLIANAA 426
>gi|15675709|ref|NP_269883.1| trigger factor [Streptococcus pyogenes M1 GAS]
gi|81170849|sp|P0C0E1|TIG_STRP1 RecName: Full=Trigger factor; Short=TF
gi|13622926|gb|AAK34604.1| transcription regulator - (trigger factor (prolyl isomerase))
[Streptococcus pyogenes M1 GAS]
Length = 427
Score = 176 bits (446), Expect = 5e-42, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 169/441 (38%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTISQDKIKPALDKAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 61 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGKEWTLSAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V D EV ++++D ++ +N +K+ E+ GD V +D+
Sbjct: 112 TKPEVKLGDYKNLVVEVDASKEVSDEDVDAKIERERQNLAELIIKDGEAAQGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K GD+ E+ FPE + +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEF---LVRQKVKR 295
+ +I EV + ++++LA + + ++ + + +
Sbjct: 232 AAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGA 291
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
I ++N D+PE ++ E N + + M + E+ Y
Sbjct: 292 AIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQRQGISPEMYFQLTGTTQEDLHNQYS 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E T+ E++ + + ++
Sbjct: 352 AEADKRVKTHLVIEAIAKAEGFEATDSEIEQEINDLATEYNMPADQVRSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDIAMKKAVEVITSTASVK 427
>gi|322807546|emb|CBZ05121.1| cell division trigger factor [Clostridium botulinum H04402 065]
Length = 430
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 195/437 (44%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L++ + S + ++ + + + N+ GFR GK PL+ IK YG+
Sbjct: 1 MNVKVENIEKNVVKLEITVDSEKFNEAVKKSFKKNAKRFNVPGFRKGKAPLNIIKKYYGE 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+ ++ P+ + + + + P I + + I D
Sbjct: 61 GVLFEDAINFCCEDTYPKAIEENNIKPVDYPQIDVVQ---------IGEGKDFIYTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+P++++ + ++V + EV++ ++ ++ + + N +E E E G+ +D+
Sbjct: 112 TVPEVKLGEYKGVEVKKVSYEVEDGAVENELKSMQEKNARVSLKEEGEIEKGNIAIIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E K+ + +GS + + LVGLK + KE+ FPE++ +DL GK
Sbjct: 172 GYVDGKAFEGGEAKDYEIEIGSGTFIGDFEDQLVGLKKDESKEVNVSFPEEYGREDLNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+IK++ ++++ A F++ ++ ++K+ + + + +
Sbjct: 232 PATFEVTIKDIKVKELPALDDEFAKEVSEFDTLEELKSDIKDRMKKELSEKAKAEYEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ + ++P+ ++E E +++ + + + +S +E+ +Y
Sbjct: 292 VEAVGANAEIEIPKVMIEKEIENMVRDLEMRLKYQGLDLKSYYEFTNSSEEKVKEYMRET 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV T +++ I + +I+ TEEE++ + ++ + + A L
Sbjct: 352 AEKRVKTDLIMQEIAKVEDIKATEEELKEKAMEVAKQYGQKDVEKTAELIANA-QKAYLE 410
Query: 414 APIFEDKVIDHILKSVQ 430
I KV+D ++++ +
Sbjct: 411 IDIVNGKVLDLLVENSK 427
>gi|297571127|ref|YP_003696901.1| trigger factor [Arcanobacterium haemolyticum DSM 20595]
gi|296931474|gb|ADH92282.1| trigger factor [Arcanobacterium haemolyticum DSM 20595]
Length = 512
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 85/472 (18%), Positives = 186/472 (39%), Gaps = 23/472 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ ++ + +L V + + + + + + + NI GFRPG P +++ GK
Sbjct: 1 MKNSVEYLSETRVKLAVEVTAEEFAPEYEKAAKTLAKQVNIPGFRPGHAPRRILEAKIGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I+ + I++ + + + +++ D RP I I+E G T LK + D
Sbjct: 61 GYIIEQAINDGMDKYYQQAVAEADVFPMSRPEIAIDEVPEMKGKG---DTTALKFTVEVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+I ++ L V EV + ++D ++ + + E + GD VT+D
Sbjct: 118 VRPEIILADPATLTVKVASVEVSDADVDAELDALRERFATLNTVERAAAKGDHVTIDMVA 177
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D ++D + + + +G ++ + E L G K GD+ E + A K
Sbjct: 178 TIDGEEIDDVAG--ISYKIGEGNMLAGQDEALTGAKAGDEVEFTAKLMGGAHEGEEAQVK 235
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++ + V LP + + F++ ++ + ++ + +++ D
Sbjct: 236 ITVHTVKESV---LPEADDEFAQLASEFDTLDELKEDLRKAAGKNKGNDAVAEGTQKLAD 292
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ F +PES+V E L++ E D+ + + +
Sbjct: 293 ALLEAVQFPLPESVVAEEVKNHLEREGKEA-------------DDAHGEEIRGEVEGALR 339
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T ++L + N++V ++E+ L Q + + + + N + I +
Sbjct: 340 TQLLLDAYAKAFNVDVAQDELIEFLVSQAQMYGMDPNQFIQAAAQT-NQIGAFAGEIARN 398
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + L+ ++ D T + D E+ + + S E A SE
Sbjct: 399 KGLIAALRLAKVEDENGTVIDVTDILGEAPEGETVPDFSAQEKKVKVVAKSE 450
>gi|325125525|gb|ADY84855.1| trigger factor cell division [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 439
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 176/443 (39%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K + EL I + + S ++ ++ + GFR G V YG+
Sbjct: 1 MSANWKTTGKTTGELSFEISQDEIKKSLDKAFGRVKKSLRVPGFRKGHVSRVIFNQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ + E + + +A +P I +++
Sbjct: 61 EALYEDALNFALPEAYSAAVKETGIKAVGQPQIVPVSMG---------KNKAWEMKAIVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + +++V + V +K+ID ++ + + N +K ++E GD VT+DY
Sbjct: 112 VEPEVELGQYTEIEVPKQNTRVYQKDIDAELTKRQEQNAEMVLKNDKAENGDTVTIDYVG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD V + S +N +GS + LVG G++ ++ FPED+ KDLAGK+
Sbjct: 172 TVDGVEFDGGSAQNYSLELGSNTFIPGFEDQLVGHGAGEEVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV + ++++ A E+ ++ ++K E + ++
Sbjct: 232 AHFATKIHEVKTKQLPELDDEFAKDVDDSVETLDELKEKIKAELKSEKEEAAKAAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ T ++P+ +++ + + L + +M Q +++
Sbjct: 292 ITTAVKNATVEEIPDVMIQEDVDNQLNQYLGDMQRQGIDPQTYFKLTNTTEDQLRSQLSA 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K E ++EE+ + + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVAKEGFEASKEEIDAEIKDLADNYNMSEKAVRNALSD-----EML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
I K +D I S + V +
Sbjct: 407 AHDINVRKAMDLITDSAKQVAKA 429
>gi|154482730|ref|ZP_02025178.1| hypothetical protein EUBVEN_00407 [Eubacterium ventriosum ATCC
27560]
gi|149736325|gb|EDM52211.1| hypothetical protein EUBVEN_00407 [Eubacterium ventriosum ATCC
27560]
Length = 426
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 86/437 (19%), Positives = 186/437 (42%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + +P+ L + + + ++K N+ GFR GKVP + I+ +YG
Sbjct: 1 MSLQVEKLENNTAKLTIEVPAEELDKAIQKAYQKNKNKFNVPGFRKGKVPYAMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E +++I E ++ + RP I++ + IE
Sbjct: 61 GVFYEEAANDLIPEAYANAAAESELEIVARPEISVTQ---------IEKGKPFVFEAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + ++V + +V KE++ ++ +I + N + ++ D+ T+D+
Sbjct: 112 LKPEVKLGEYKGIKVEKADTKVTAKEVNAELDKIKEQNARLVAADDKAIEEGDQATIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E ++ +GS + LVG K G++ E+ FPE++ K+LAGK
Sbjct: 172 GFVDGVAFEGGKGEDYPLTIGSHSFIDTFEDQLVGKKVGEEVEVNVTFPEEYQAKELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+IKE+ V+++ A F++ + + + + + + + ++
Sbjct: 232 PAMFKVTIKEIKVKEYPKVDDEFAQEVSEFDTLAEYKADIKKGLVAKKKEAAAAEKESKV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
++ I D+PE ++E + ++++ ++ E+ L+
Sbjct: 292 IEEIVKNSEMDIPEKMIEAQAQQMVEEFAQNIAMQGISFDQYMQFTGSTVEQLLEQVKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
AK R+ + +VL + + IE T+EE + L R+ ++K+ D LR
Sbjct: 352 AKARIESSLVLEEVVKAEKIEATDEEFEKELEDMATRYQMEKEKVADLLSDDD--KKNLR 409
Query: 414 APIFEDKVIDHILKSVQ 430
I K + +
Sbjct: 410 NDICLKKAAKFVTSKAK 426
>gi|19705313|ref|NP_602808.1| trigger factor, PPIase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|23822229|sp|Q8R5Z2|TIG_FUSNN RecName: Full=Trigger factor; Short=TF
gi|19713284|gb|AAL94107.1| Trigger factor, ppiase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 429
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 87/440 (19%), Positives = 176/440 (40%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E E+ + + + + ++ + + A + GFR G P + + Y
Sbjct: 1 MNYEVKKLEKSAVEVKLHLTAEEVKPIVDKVLAHVGEHAEVAGFRKGHAPKEVLMTNYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I S+ ++ I PEI+ K + I DL L D+
Sbjct: 61 HIESDVANDAINANFPEIVDKEKLEPVSY-----------VRLKEINLKDDLNLTFDIDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE---TESEIGDKVTVDY 177
PQ E+ ++ L+ + E+ + + ++ + +N+ E E ++++ D V + +
Sbjct: 110 YPQFELGNYKGLEAEKKSFEMTDDLLKEELEIMVRNHAKLEEVEDAGYKAQLDDTVDLAF 169
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D ++ +GS E LVG G + EI FP ++ +LAG
Sbjct: 170 EGFMDGAPFPGGKAESHLLKLGSKSFIDNFEEQLVGYTKGQEGEITVKFPAEYHAAELAG 229
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + I + +N+D A LG+ S ++ ++ + + + +
Sbjct: 230 KPAQFKVKINAIKKLRQPELNDDFAKELGYASLDELKAKTKEETTKRENDRIENEYVSAL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
LD + T DVP S+V+ E L+++ +++S K + + E
Sbjct: 290 LDKLMETTTIDVPVSMVQAEIQNRLKELEYQLSMQGFKMDDYLKMMGGNVETFAAQLAPA 349
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LA 410
A+++V ++L I + NN E T+EE+ + + + + + +K N A
Sbjct: 350 AEKKVKIDLILDRIAKDNNFEATDEELNQRMEEIAKMYGMDVPALEEELKKNKNLENFKA 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++ I K ID ++K+ +
Sbjct: 410 SVKYDIVMKKAIDEVVKNAK 429
>gi|227535179|ref|ZP_03965228.1| cell division trigger factor [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187224|gb|EEI67291.1| cell division trigger factor [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 445
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 85/461 (18%), Positives = 184/461 (39%), Gaps = 25/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K EL I ++ ++ + +R + GFR GKV + K +YG
Sbjct: 1 MSAKWKKKGTNDGELTFEIDLPQIQQGLDQAFQRVRKNLTVPGFRKGKVSRTVFKRMYGD 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + ++ ++ + + + +P I ++ + ++ +
Sbjct: 61 AALYEDALNILLPDAYEAAVKESGIDPVDQPQINVDSM---------DEGKPWVIKATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++ + + L+V + EV K+ID ++ + + VK+ ++ D V +DY
Sbjct: 112 VKPEVTLGQYKGLEVPKQNVEVSAKDIDAELEKRREQQAELVVKDDKAAENGDTVVIDYV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + S KN +GS E LVG K+GD+ + FPED+ DLAGK
Sbjct: 172 GTIDGTEFDGGSSKNYSLELGSNSFIPGFEEQLVGHKSGDEVTVNVTFPEDYKAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVV--NNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I EV + + + ++ ++ +++ E + V+
Sbjct: 232 AAEFKTTIHEVKVKELPALDDDFAKDLDDDVDTLDELKAKIKKELTDQREEAAKNAVQEA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++ T +VP +++E E + + + M + +++ + +
Sbjct: 292 AIKEATDNATIKEVPNAMIEQEVHNQMDQYLGNMQRQGISPKMYYQLTGTSEDDLHKQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A RV T +VL I + +I+ TE+++ + + EK + +
Sbjct: 352 ADAAMRVRTNLVLEAIVKAEDIQPTEDQVNEEVKNLASEYNMDEKAVRKALSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
L+ I + ID I S + + + D +S++ +K
Sbjct: 407 LKHDIGVKQAIDIITDSAK--EVESAKDDADKEASDAKADK 445
>gi|262066530|ref|ZP_06026142.1| trigger factor [Fusobacterium periodonticum ATCC 33693]
gi|291379764|gb|EFE87282.1| trigger factor [Fusobacterium periodonticum ATCC 33693]
Length = 429
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 83/440 (18%), Positives = 179/440 (40%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K E E+ + + + ++ ++ ++ + A I GFR G P + + Y
Sbjct: 1 MKYEVKKLEKSAVEVKLHLDAAEVSPLVDKVLKHVGEHAEIAGFRKGHAPKEALMANYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I S+ ++ I PEI+ K + I +L L D+
Sbjct: 61 HIESDVANDAINAHFPEIVEKEKLEPVSY-----------VRLKEIALKDELDLTFDIDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDY 177
P+ + ++ L+ + E+ + ++ ++ + +N+ E ++++ D V + +
Sbjct: 110 YPEFTLGNYKGLEAEKKTFEMTDDLLNTELEMMQRNHSKLVEVEDASYKAQLEDTVDLAF 169
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D V ++ +GS + LVG G + EI FPE++ +LAG
Sbjct: 170 EGFMDGVPFPGGKAESHLLKLGSKSFIDNFEDQLVGYTKGQEGEITVKFPEEYHAPELAG 229
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + I + +N++ A LG+ES ++ ++ + + + +
Sbjct: 230 KPAQFKVKINAIKQLREPELNDEFAKELGYESLEDLKNKTKEETIKRENDRIENEYVGAL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
LD + T DVP S+V+ E L+++ +++S K + + +
Sbjct: 290 LDKLMETTTIDVPVSMVQAEIQNRLKELEYQLSMQGFKMDDYLKMMGGNIDTFAAQLTPA 349
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LA 410
A+++V ++L I +N E +EEE+ + + + + +K N A
Sbjct: 350 AEKKVKVDLILDKIARENKFEASEEELNGRMEEVAKMYGMDVPTLEGELKKNNNLDNFKA 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++ I K ID ++K+ +
Sbjct: 410 SVKYDIVMKKAIDEVVKNAK 429
>gi|183601396|ref|ZP_02962766.1| trigger factor [Bifidobacterium animalis subsp. lactis HN019]
gi|241191104|ref|YP_002968498.1| trigger factor [Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196510|ref|YP_002970065.1| trigger factor [Bifidobacterium animalis subsp. lactis DSM 10140]
gi|183219002|gb|EDT89643.1| trigger factor [Bifidobacterium animalis subsp. lactis HN019]
gi|240249496|gb|ACS46436.1| trigger factor [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240251064|gb|ACS48003.1| trigger factor [Bifidobacterium animalis subsp. lactis DSM 10140]
gi|289178848|gb|ADC86094.1| Trigger factor, ppiase [Bifidobacterium animalis subsp. lactis
BB-12]
gi|295794093|gb|ADG33628.1| trigger factor [Bifidobacterium animalis subsp. lactis V9]
Length = 461
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 63/434 (14%), Positives = 166/434 (38%), Gaps = 24/434 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L + + + + ++I + + GFR G VP + G
Sbjct: 1 MKISVRNLEPTKAKLTITVDQDEFDPYLEDARKEIAEQITVPGFRKGHVPGKLVDQRVGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +++ + ++ + L ++D R +P I + E LK + +
Sbjct: 61 GAVAGEAVNKALPDMYAKALDEKDIRPMDQPQIEVVEMPQSAADDT-----KLKFTATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P+ E+ + + L++ D EV + +++ ++ + + + ++ GD +D T
Sbjct: 116 RRPEFELPNLEGLEIAVDKAEVSDDDVNNRLGTLRQRFATLVGVDRPAQKGDFANIDLTA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D ++ S++ V + +GS + E L GL G++ E D G+K
Sbjct: 176 QTDGETVD--SQEGVSYEIGSGTMLDGLDEALEGLSAGEETTFESTL----EGGDHEGEK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + V + +++D A F++ ++ + I+ +E + +
Sbjct: 230 AQVKVKVNSVKAEELPELDDDFAQEASEFDTLDELKAEIRKNIEADAEGRQATIARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +P+ + N L+ + E + + + +
Sbjct: 290 ETLEEGLDIPLPKGVRNNMVEQQLKSMGVEAG----------KATSDQKKEAEEAVDKML 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + EK +++V++ ++ + L ++ + + + +
Sbjct: 340 KDQMVLDALAEKLDVQVSQSDVFNFLGSIAQQYGMDPNMFIQALMRN-GQIGSAVEEVAR 398
Query: 419 DKVIDHILKSVQIV 432
K + ++ V+
Sbjct: 399 SKGMLAGMRQVKFT 412
>gi|21911170|ref|NP_665438.1| trigger factor [Streptococcus pyogenes MGAS315]
gi|28895144|ref|NP_801494.1| trigger factor [Streptococcus pyogenes SSI-1]
gi|71911425|ref|YP_282975.1| trigger factor [Streptococcus pyogenes MGAS5005]
gi|139473118|ref|YP_001127833.1| trigger factor [Streptococcus pyogenes str. Manfredo]
gi|41018204|sp|Q879L7|TIG_STRP3 RecName: Full=Trigger factor; Short=TF
gi|67461684|sp|Q5XA08|TIG_STRP6 RecName: Full=Trigger factor; Short=TF
gi|166229943|sp|A2RCL1|TIG_STRPG RecName: Full=Trigger factor; Short=TF
gi|3549287|gb|AAC82391.1| RopA [Streptococcus pyogenes]
gi|21905381|gb|AAM80241.1| transcription regulator - trigger factor [Streptococcus pyogenes
MGAS315]
gi|28810389|dbj|BAC63327.1| RopA [Streptococcus pyogenes SSI-1]
gi|71854207|gb|AAZ52230.1| trigger factor, ppiase [Streptococcus pyogenes MGAS5005]
gi|134271364|emb|CAM29584.1| trigger factor (prolyl isomerase) [Streptococcus pyogenes str.
Manfredo]
Length = 427
Score = 176 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 169/441 (38%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTISQDKIKPALDKAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 61 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGKEWTLSAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V D EV ++++D ++ +N +K+ E+ GD V +D+
Sbjct: 112 TKPEVKLGDYKNLVVEVDASKEVSDEDVDAKIERERQNLAELIIKDGEAAQGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K GD+ E+ FPE + +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEF---LVRQKVKR 295
+ +I EV + ++++LA + + ++ + + +
Sbjct: 232 AAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGA 291
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
I ++N D+PE ++ E N + + M + E+ Y
Sbjct: 292 AIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQRQGISPEMYFQLTGTTQEDLHNQYS 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E T+ E++ + + ++
Sbjct: 352 AEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATEYNMPADQVRSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDIAMKKAVEVITSTASVK 427
>gi|116747552|ref|YP_844239.1| trigger factor [Syntrophobacter fumaroxidans MPOB]
gi|166229948|sp|A0LEF2|TIG_SYNFM RecName: Full=Trigger factor; Short=TF
gi|116696616|gb|ABK15804.1| trigger factor [Syntrophobacter fumaroxidans MPOB]
Length = 435
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 93/433 (21%), Positives = 199/433 (45%), Gaps = 14/433 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V +++L V IP ++ + ++ + IKGFRPGKVP S IKS YGK
Sbjct: 1 MNVSVVDLSENQKKLQVEIPPEKVRQEIEGKYREMSRRIKIKGFRPGKVPRSIIKSYYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I E + I+E PE L + D + + +D++ + D+
Sbjct: 61 TIEQEVSSQFIQETFPEALKETDLKPLVE---------ADVSETHFNDSGSFSYTAIVDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
P E+ + L++ + +V ++++D ++ + + + E + GD +D+T
Sbjct: 112 CPPFELEGYRGLEIRKPSIDVADEQVDSELQRLREQHAELRTLETERPAREGDVAVIDFT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + E + +G + + L+G + G+ E +PE+ ++++AGK
Sbjct: 172 PSVDGKVFEKGKSADYMAEIGKKAVHPDFDANLIGRRAGETVSFEVDYPENAPMREIAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+V ++KEV + +++D A F++ A++ +++ + E+ R V++Q
Sbjct: 232 RVLFEVTVKEVKEKVLPELDDDFAQAVNSRFDALDALKQTIREELLKREEYQARSDVQQQ 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
ILD + +K ++ +++ E + ++ + + S K E Y A+R
Sbjct: 292 ILDQLLSKVKIELSAKVIDREVDRMVGNLLHQFESQGLKMDVSKFNTPEIRADYRPQAER 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+L ++L I ++ N+++T+EE++ +YQ++ R+ + + H + + +
Sbjct: 352 NILRRLILEKIADQENLKLTDEEIEQ-VYQEVARYARMDVATVKHEFADSAVVEQSKESK 410
Query: 417 FEDKVIDHILKSV 429
++KV +
Sbjct: 411 IQEKVFRFLESEA 423
>gi|104773861|ref|YP_618841.1| trigger factor [Lactobacillus delbrueckii subsp. bulgaricus ATCC
11842]
gi|116513868|ref|YP_812774.1| trigger factor [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|118574072|sp|Q1GAP9|TIG_LACDA RecName: Full=Trigger factor; Short=TF
gi|122275362|sp|Q04B36|TIG_LACDB RecName: Full=Trigger factor; Short=TF
gi|103422942|emb|CAI97604.1| Trigger factor [Lactobacillus delbrueckii subsp. bulgaricus ATCC
11842]
gi|116093183|gb|ABJ58336.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 439
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 176/443 (39%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K + EL I + + S ++ ++ + GFR G V YG+
Sbjct: 1 MSANWKTTGKTTGELSFEISQDEIKKSLDKAFGRVKKSLRVPGFRKGHVSRVIFNQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ + E + + +A +P I +++
Sbjct: 61 EALYEDALNFALPEAYSAAVKETGIKAVGQPQIVPVSMG---------KNKAWEMKAIVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + +++V + V +K+ID ++ + + N +K ++E GD VT+DY
Sbjct: 112 VEPEVELGQYTEIEVPKQNTRVYQKDIDAELTKRQEQNAEMVLKNDKAENGDTVTIDYVG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD V + S +N +GS + LVG G++ ++ FPED+ KDLAGK+
Sbjct: 172 TVDGVEFDGGSAQNYSLELGSNTFIPGFEDQLVGHGAGEEVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV + ++++ A E+ ++ ++K E + ++
Sbjct: 232 AHFATKIHEVKAKQLPELDDEFAKDVDDSVETLDELKEKIKAELKSEKEEAAKAAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ T ++P+ +++ + + L + +M Q +++
Sbjct: 292 ITTAVKNATVEEIPDVMIQEDVDNQLNQYLGDMQRQGIDPQTYFKLTNTTEDQLRSQLSA 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K E ++EE+ + + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIVAKEGFEASKEEIDAEIKDLADNYNMSEKAVRNALSD-----EML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
I K +D I S + V +
Sbjct: 407 AHDINVRKAMDLITDSAKQVAKA 429
>gi|291456558|ref|ZP_06595948.1| trigger factor [Bifidobacterium breve DSM 20213]
gi|291381835|gb|EFE89353.1| trigger factor [Bifidobacterium breve DSM 20213]
Length = 457
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 73/475 (15%), Positives = 179/475 (37%), Gaps = 26/475 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L V + L + ++I + N+ GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTVTVEPEELNPYLDAARKEIAKQVNVPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +++ + E+ + L ++ R +P + + LK + +
Sbjct: 61 AAVAGEAVNDAVPELYSKALDEKKIRPMAQPEFDVQD-----VPQAANDDTKLKFTATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ D L++ EV ++++D+++ + + + + GD +D T
Sbjct: 116 RRPDIELPEIDGLEIAIAKPEVKDEDVDKRLEALRQRFGTLVGVDRPATKGDFANIDLTA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S++ V + +GS + E L GL G++ E D G+K
Sbjct: 176 EIDGETVD--SQEGVSYELGSNTMLDGLDEALDGLSAGEETTFEGTLEAG----DHEGQK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + ++++ A F++ ++ + Q +E + + +
Sbjct: 230 ATVKVKVNSVKAEELPELDDEFASEASEFDTLDELKADIRKAAAQDAEGRQATEARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VP+ + N L+ + + + + +E ++ +
Sbjct: 290 AKLQEGLEIPVPKGVKANMVAEQLKGM----------TPDPEKATKEQKAQAEETVEKEL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + EK +++V++ ++ + L ++ + K L +
Sbjct: 340 RDQMVLDALAEKLDVQVSQSDVFNFLASIAQQYGMDPNNFIQAIIKN-GQLGSAVQEVGR 398
Query: 419 DKVIDHILKSVQIVD--RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + +++V+ V ++E + ++ +S E + +
Sbjct: 399 SKGLLAGMRAVKFTADGEAVDLSNFLGEAAEEEESESVEAASAAAAVADELSSKD 453
>gi|294786963|ref|ZP_06752217.1| trigger factor [Parascardovia denticolens F0305]
gi|294485796|gb|EFG33430.1| trigger factor [Parascardovia denticolens F0305]
Length = 459
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 73/475 (15%), Positives = 186/475 (39%), Gaps = 26/475 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-K 60
++ + E K+ L V + L ++ ++I ++ NI GFR G VP I+ +G
Sbjct: 6 KITMRNVEPTKKVLTVTVDQEELEPYMDKARKEIANQVNIPGFRKGHVPGKLIEQRFGFG 65
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E +++ + + + + +R R +P I + + E LK ++
Sbjct: 66 AVIGEAVNDAVPDFYNKAIEERKLRPMDQPKIDVKD-----VPESHEDDKKLKFTAEVEV 120
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ FD ++V+ V ++++D+++ + + + ++ GD +++
Sbjct: 121 RPEVKLPKFDAMEVSIPEQAVTDEDVDKRLNNLRQRFGTLVSVDRPAKKGDFASINLDTQ 180
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D ++ S++ + + VGS + S E L GL G+ + F + G+K
Sbjct: 181 IDGKSVD--SQEGISYEVGSGAMLSGLDEALDGLSAGE----DTTFSSTLEGGEHEGEKA 234
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++ V ++++ A F++ ++ ++ + ++ + + +
Sbjct: 235 EVKLTLNSVKEEQLPELDDEFAKDASEFDTLDELKADIRKQSEVDAQARQATEARDAFMA 294
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
I +P+ ++E L+ + ++ +E + A++ +
Sbjct: 295 QIEEAEEIPIPKGVLERTVTEHLRSM---------GVEDPKKATKEQEKEAKDSAEKELR 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
IVL T+ E N++VT+ ++ + L ++ + + L +
Sbjct: 346 DQIVLDTVAESLNVQVTQADVTNFLASIAQQYGMDPTNFITSIVQN-GQLNSAVQEVARS 404
Query: 420 KVIDHILKSVQIVD---RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + ++ V D + V Q + E + S E
Sbjct: 405 KGMIEAMRQVTFKDPAGKVVDLGQFLGSDEEEEEASVAAASQAAAVADEVSKSEE 459
>gi|300087789|ref|YP_003758311.1| trigger factor [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527522|gb|ADJ25990.1| trigger factor [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 478
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 86/478 (17%), Positives = 187/478 (39%), Gaps = 35/478 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V EK E + L V + S + + + + K + GFR GK P ++ GK
Sbjct: 1 MKVTEKKIEACQAWLTVELDSTDMQQALENAYQRLVKKTEVPGFRKGKTPRPILERYLGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E+ DE++ + + + +++ + PS+ I + + +
Sbjct: 61 ERFIEESFDEVLPQKCAQAVKEQELTSFGTPSVEIIQ------------NEPVVFKARVP 108
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++ + + ++++ + E+ ID + ++ +E + + GD V +D
Sbjct: 109 LPPKVTLGDYKAIRLSPEPVEIKADIIDGMIKQLRHEKATWEPVDRPVQDGDLVVMDMES 168
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
S+D+V +Q + + S +E ++GLK GD KE + +P+D + +LAGK+
Sbjct: 169 SIDDVPFVNQKGIQLGINLESGYPAPGFSEAIIGLKPGDAKEFKLRYPDDFAKPELAGKE 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV ++D + E+ ++ + ++ E +K + Q+
Sbjct: 229 PEFKVELLEVKEENLPPEDDDFVRSLEVNIETFVELKERITDNYRKQLESRNEEKYESQL 288
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS-----IDEEDLQYYHM 352
+D + T + P +LV+ EY ++ + + EE +
Sbjct: 289 VDELVKISTAEFPPNLVDMEYERLVNQQLDQWQQQVGSEAEYRELLGRVNPEELAKNLRP 348
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ RV ++LG + + IEVT+E++ + L P ++ P A E+
Sbjct: 349 QAEERVKRSLILGQLSAEEKIEVTDEDLDIEINTILENIPEANREEQRAAMDNPEARDEI 408
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
I K ++ + + + EK ++ + +
Sbjct: 409 MQIILTRKTMNRFKEIA---------------GAPAPAEKTTGEADDSAPKAKKAGTT 451
>gi|270293336|ref|ZP_06199545.1| trigger factor [Streptococcus sp. M143]
gi|270278185|gb|EFA24033.1| trigger factor [Streptococcus sp. M143]
Length = 427
Score = 176 bits (445), Expect = 8e-42, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPEVDRVFNSVKKTLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ETLYQDVLNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEGAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ ++ +++ E + ++
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLDELKEKYRKELTAAKEEAYKDALEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + TEEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDATEEEIQKEIEQLAATYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDIAIKKAVELITSTATVK 427
>gi|154509335|ref|ZP_02044977.1| hypothetical protein ACTODO_01860 [Actinomyces odontolyticus ATCC
17982]
gi|153798969|gb|EDN81389.1| hypothetical protein ACTODO_01860 [Actinomyces odontolyticus ATCC
17982]
Length = 439
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 75/468 (16%), Positives = 185/468 (39%), Gaps = 36/468 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E K L V +P L ++ ++I + NI GFR G VP I +G+
Sbjct: 1 MKSTVETLEPTKVRLTVEVPFEELKSEMDKAYKEIAGQVNIPGFRKGHVPPRIIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +++++ + +++ D R +P++ + E I + L D
Sbjct: 61 AAVIEQVVNQVLPGYYSDAVNENDLRPMAQPTVDVTE----IPNVTGAQGGQLVFTAEVD 116
Query: 120 ILPQIEISS-FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
++P E+ + L V + EV E+++++++ ++ + +++ GD T+D
Sbjct: 117 VVPAFELPEIDEKLVVEVEPTEVTEEDVEKELEDLRGRFATLKTINRKAKTGDFATIDLV 176
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D ++ S +V + +GS + L G K G++ + A
Sbjct: 177 ATIDGKQVD--SASDVSYEIGSGSMLDGQDTALRGTKAGEEVTFTSKLKGGEHEGEEAEV 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + LP ++ + F++ ++ ++ Q E + ++
Sbjct: 235 TITIKAMKTR---ELPKADDDFAQMVSEFDTIDELKEDLKKQAAQSKESQQALAARDALI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +K +PES V+++ + + + + ++ +
Sbjct: 292 DLLLDKVEIVLPESAVDHQVEHRVGEDAK----------------PKAKKEAREAVEKEI 335
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T ++ + +K +++V+++E+ Q F ++ +A + A +
Sbjct: 336 RTELLSEALAKKFDVQVSQQELIDYAIQMSQNFGID----INQLFSSSQQMANVVADLGR 391
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFD--NSSESSPEKLLDKSSKVE 461
K + LK V + D V + F ++E E + + + + E
Sbjct: 392 SKALIEALKVVTVKDANGADVDLSKFFGTDPATEEGAEIITEVADEQE 439
>gi|37523764|ref|NP_927141.1| trigger factor [Gloeobacter violaceus PCC 7421]
gi|41018169|sp|Q7NDP0|TIG_GLOVI RecName: Full=Trigger factor; Short=TF
gi|35214769|dbj|BAC92136.1| trigger factor [Gloeobacter violaceus PCC 7421]
Length = 461
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 78/471 (16%), Positives = 190/471 (40%), Gaps = 19/471 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + L+V + + ++ + + D A I GFRPGK P + YGK
Sbjct: 1 MKVTQEKLPRSQMGLNVEVEGEKSKQAYEKLVRDTMRTARIPGFRPGKAPRQLVLQFYGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ ++ ++ +I + E + + + + + G + L + + D
Sbjct: 61 ERLRAQALENLIDSSLKEAIEQESIASLGNLQL---RDSFEELLGRYQPGEPLSFKAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVD 176
+ P++++ ++ L V + K++D Q+ + + E + E +
Sbjct: 118 VQPEVQLGTYTGLTVRYSEVPYEAKQVDDQLEQYREQRAVLVPVEGRAAEVGDTAVIDFA 177
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
T + D + + + + L + TE ++G++ G+ E+ FP+D+ ++LA
Sbjct: 178 GTKAADGNEIVGGKATDFEVELLPGRLIAGFTEGIIGMQIGESTELALRFPDDYPQQELA 237
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
G + S+K++ V+++D A FE+ A+R Q+ ++ + R
Sbjct: 238 GVDAKFAVSLKDLKIKELPVLDDDFAGDISEFETLEALRAFLEQQQQEQAAEKTRANRDA 297
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED--LQYYHML 353
I+ + + T D+PE+LV E + ++ + + + + + +
Sbjct: 298 AIIKALVAETTVDLPETLVNREVQFLAEQSFRNLQQQGIDPSRIFTEENMPRVRETLRVD 357
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ R+ + L + NI V EE++ + + + + R
Sbjct: 358 AENRLKRTLALAQVARAENIVVEEEQVAARIVELRSELEEEVSE--------QALAEFAR 409
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQ 464
+ +K+++ + + I + + + + S E +P ++ +++ E
Sbjct: 410 EEMLTEKILEWLAEHSTI-ELTLPGEAIEPGSGEDAPPEVAAGATEPEAQP 459
>gi|294670413|ref|ZP_06735295.1| hypothetical protein NEIELOOT_02132 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307877|gb|EFE49120.1| hypothetical protein NEIELOOT_02132 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 384
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 73/396 (18%), Positives = 175/396 (44%), Gaps = 14/396 (3%)
Query: 53 HIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL 112
I+S+YG I ++ ++E+ +++ + + A P + EG+ D +
Sbjct: 1 MIQSMYGAGIQNDVMNELAQKVFFDTAVAEGWKIAGMPRLEGVEGQDD--------KENF 52
Query: 113 KLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDK 172
+++ P++++ +V + V + E+++ + + + F E ++ GD+
Sbjct: 53 LFSGVFEVFPEVKVGDLSGQEVEKVTASVGDAEVEKTIDILRQQRTRFNHTERAAKDGDR 112
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
V +D+ +D S +N F++G + E + GLK G+ K++E FPED+
Sbjct: 113 VIIDFAGKIDGEAFAGGSAENYAFVLGQGQMLPEFEAGVNGLKEGESKDVEVNFPEDYHG 172
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVR 290
K++AGK +++ V P+ V+ A LG MR + +++ + V
Sbjct: 173 KEVAGKTAVFTITVRNVAEPVLPEVDEIFAKALGIADGNIETMRAEVKKNVEREVKRRVD 232
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
+ K ++ + VP +L+ E + +++ + + L +
Sbjct: 233 SQNKEAAMEALLAVSELQVPNALINEEAARLAAEMKQNFINQGMADA---KNLDLPLDMF 289
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A+RRV G++L + + N +E +++++ + + + ++++D + + L
Sbjct: 290 KEQAERRVKLGLILAEVVQANGLEPSKDQIDAVIADFAESY-EDPQEVIDWYHADNSRLQ 348
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ E V D +L ++ ++ ++FD++ N +
Sbjct: 349 GPTSLAVEANVTDFVLGKAKVTEKALSFDEVMGNQA 384
>gi|157273406|gb|ABV27305.1| trigger factor [Candidatus Chloracidobacterium thermophilum]
Length = 467
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 84/482 (17%), Positives = 185/482 (38%), Gaps = 39/482 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ +++EL + +P+ R+T SFN + A I GFRPGK P+S ++ +
Sbjct: 1 MKFEINHLSSVRKELIIELPAERVTRSFNRFSNEFARHARIPGFRPGKAPVSLVRQRFEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++ E + E + + P I + + L+++ D+
Sbjct: 61 DIRERVLAQLGSEAIEEAIRASQLQVLGEPII---------QDIRLMDQLPFVLKVAVDV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + + L+ T+ + V E ++DR + ++ + E +
Sbjct: 112 FPEFTVGPLEGLEGTKRVTPVTEADVDRVLDQLRDSLATITPVEDGRPSQP-GDLVTVAL 170
Query: 181 VDNVILEDQSK-----------KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
V V+ + S + +G+ E E L G G+Q +E +P
Sbjct: 171 VGYVLEDGSSAPSEGQAPNIRLRRETLELGAKTTRQEFDEALRGRIVGEQVTVEIQYPPV 230
Query: 230 HS------------IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLC 277
++DLAGK+V+ + +++++ +++ A R+ +A+R
Sbjct: 231 TPGSTAEAAPVAEGVEDLAGKRVQFHLTVEKLVQKTRPALDDAFAQRVAGMDLAALRARI 290
Query: 278 SQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ 337
++ E + + Q+LD + + + PESLV + N L + ++ +
Sbjct: 291 RSDLEAEVERRALEALDAQLLDQLVARTGVEAPESLVTQQVNRRLGEFVEQLQQRGINPR 350
Query: 338 NVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK 397
+ ++ + A+ V IVL + + +EVTE E+ L + + +
Sbjct: 351 KANYDFQKMGEALRPGAETEVKRAIVLEQVAREAKVEVTEAEVSEYLSEMAQQLGVAPEA 410
Query: 398 MLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ + L +R + K + + + ++ + + + E +L +S
Sbjct: 411 LRARLTR-EGQLDNVRISLRNRKALAIVRSAARVETQT-----ALPTDASAPEETVLFQS 464
Query: 458 SK 459
Sbjct: 465 EN 466
>gi|312143234|ref|YP_003994680.1| trigger factor [Halanaerobium sp. 'sapolanicus']
gi|311903885|gb|ADQ14326.1| trigger factor [Halanaerobium sp. 'sapolanicus']
Length = 426
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 89/435 (20%), Positives = 189/435 (43%), Gaps = 17/435 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ ++ EG K +LD+ I S ++ ++ + + I GFR GK P ++ YG+
Sbjct: 1 MEINKEVLEGNKIKLDIEIESEKVEEALEKAYRKVVKDMTIPGFRKGKAPRKIVEKRYGE 60
Query: 61 SILS-ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + +D +I + + L + D +P I I K +
Sbjct: 61 EVLHKDALDILIPQGYSQALEETDIEPIDQPEI---------ADFYIAKGEPAKFTAVVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYT 178
+ P++E+ + DL + ++ V E+EID ++ + + E + + GD +D+T
Sbjct: 112 VKPEVELGEYKDLGIEKEDASVKEEEIDARLKNMQNEHSQLVTSERKELQEGDFAIIDFT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD S + +GS E L+GL+ G++K +E FPE++ DLAG+
Sbjct: 172 GYVDGEEFPGGSAEEYSLEIGSGSFIPGFEEQLIGLEVGEEKTVEVTFPEEYQADDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +KE+ +++D AV +E+ + ++ +++ + E + ++
Sbjct: 232 DASFDVKLKEIKVRKSPELDDDFAVEASEYETLAELKESIKEELSEQKEKNAENNYREEL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
+ +S ++ ++LV+ + + + Q + +S + ++ +EE +
Sbjct: 292 IKKVSENAEVEMTDTLVDEQLDQMFQSLSQSISQQGMEVEDYLGYMGIDEEEWREQNRDS 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R +VL I E IE+++EE+ + E + + + L L+
Sbjct: 352 AAERAKELLVLDAIAEVEGIEISDEELDEEIENIAE-IHDREAEQIKAIFQMQGQLETLK 410
Query: 414 APIFEDKVIDHILKS 428
I K I+ + ++
Sbjct: 411 DDIKRQKTIEFLKEN 425
>gi|296328561|ref|ZP_06871080.1| trigger factor [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|296154370|gb|EFG95169.1| trigger factor [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 429
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 87/440 (19%), Positives = 176/440 (40%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E E+ + + + + ++ + + A + GFR G P + + Y
Sbjct: 1 MNYEVKKLEKSAVEVKLYLTAEEVKPIVDKVLAHVGEHAEVAGFRKGHAPKEVLMTNYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I S+ ++ I PEI+ K + I DL L D+
Sbjct: 61 HIESDVANDAINANFPEIVDKEKLEPVSY-----------VRLKEINLKDDLNLTFDIDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE---TESEIGDKVTVDY 177
PQ E+ ++ L+ + E+ + + ++ + +N+ E E ++++ D V + +
Sbjct: 110 YPQFELGNYKGLEAEKKSFEMTDDLLKEELEIMVRNHAKLEEVEDAGYKAQLDDTVDLAF 169
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D ++ +GS E LVG G + EI FP ++ +LAG
Sbjct: 170 EGFMDGAPFPGGKAESHLLKLGSKSFIDNFEEQLVGYTKGQEGEITVKFPAEYHAAELAG 229
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + I + +N+D A LG+ S ++ ++ + + + +
Sbjct: 230 KPAQFKVKINAIKKLRQPELNDDFAKELGYASLDELKAKTKEETTKRENDRIENEYVSAL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
LD + T DVP S+V+ E L+++ +++S K + + E
Sbjct: 290 LDKLMETTTIDVPVSMVQAEIQNRLKELEYQLSMQGFKMDDYLKMMGGNVETFAAQLAPA 349
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LA 410
A+++V ++L I + NN E T+EE+ + + + + + +K N A
Sbjct: 350 AEKKVKIDLILDRIAKDNNFEATDEELNQRMEEIAKMYGMDVPALEEELKKNKNLENFKA 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++ I K ID ++K+ +
Sbjct: 410 SVKYDIVMKKAIDEVVKNAK 429
>gi|300811978|ref|ZP_07092435.1| trigger factor [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497039|gb|EFK32104.1| trigger factor [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 441
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 89/460 (19%), Positives = 182/460 (39%), Gaps = 27/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K + EL I + + S ++ + ++ + GFR G V YG+
Sbjct: 1 MSANWKTTGKTTGELSFEISQDEIKKSLDKAFDRVKKSLRVPGFRKGHVSRVIFNQYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ + E + + +A +P I +++
Sbjct: 61 EALYEDALNFALPEAYSAAVKETGIKAVGQPQIVPVSMG---------KNKAWEMKAIVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + +++V + V +K+ID ++ + + N +K ++E GD VT+DY
Sbjct: 112 VEPEVELGQYTEIEVPKQNTRVYQKDIDAELTKRQEQNAEMVLKNDKAENGDTVTIDYVG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD V + S +N +GS + LVG G++ ++ FPED+ KDLAGK+
Sbjct: 172 TVDGVEFDGGSAQNYSLELGSNTFIPGFEDQLVGHGAGEEVDVVVTFPEDYGAKDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV + ++++ A E+ ++ ++K E + ++
Sbjct: 232 AHFATKIHEVKAKQLPELDDEFAKDVDDSVETLDELKEKIKAELKSEKEEAAKAAIQEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ T ++P+ +++ + + L + +M Q +++
Sbjct: 292 ITTAVKNATVEEIPDVMIQEDVDNQLNQYLGDMQRQGIDPQTYFKLTNTTEDQLRSQLSA 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T +VL I K E ++EE+ + + + EK + + L
Sbjct: 352 NAAERVKTNLVLEAIAAKEGFEASKEEIDAEIKDLADNYNMSEKAVRNALSD-----EML 406
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
I K +D I S + V + + SE +K
Sbjct: 407 AHDISVRKAMDLITDSAKQVAKAK-----LEEGSEDEEDK 441
>gi|283457914|ref|YP_003362516.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Rothia mucilaginosa
DY-18]
gi|283133931|dbj|BAI64696.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Rothia mucilaginosa
DY-18]
Length = 433
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 67/455 (14%), Positives = 166/455 (36%), Gaps = 24/455 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + +++V +P + +++ + ++ GFR GK+P I+ G
Sbjct: 1 MKTAVEKLNPTLAKIEVEVPFAEFKPYLDRTYKNLSGQISVPGFRKGKLPKQLIEQRAGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I+ ++++ + + + L + + +P + + D+KL ++
Sbjct: 61 DYIVEASLNDALNDYYAQALGENELSPLAQPELDVQSQ-----PSTENREADVKLTITVT 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ +++ L+V D EV ++ + + + + + E + D VT+D
Sbjct: 116 VRPEIELPNYEGLEVEVDEVEVTAEDEVQALDALRERFGTLKTVERPAADEDFVTIDIAA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ + ++ + +GS + E L GL G+ E S + AG++
Sbjct: 176 EIDGEQVD--AANDLSYQIGSGTMLDGIDEALTGLSAGEDATFE----TKLSGGEHAGEQ 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V +++ A F++ ++ +++ + + + ++L
Sbjct: 230 ATIKVKLTAVKERELPAADDEFAQLASEFDTIDELKEDIKKQVAEAKVAEQGTQARDKVL 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VPE ++E++ N + EE +
Sbjct: 290 AKLVELVEIPVPEKVIEDQLEQHF----------NNPNAEAGHDTEEHRAEVRENTETAF 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + +K + V + EM + + ++ + L +
Sbjct: 340 KNEMVLDAVADKEEVTVDQAEMINYIITMSSQYGMDPNQFAQMLDGS-GQAGALVGEVRR 398
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKL 453
K + +LK+ + D K L E
Sbjct: 399 SKALAAVLKTAVVKDTKGNVVDLSKYLGEGEEAAA 433
>gi|328944884|gb|EGG39043.1| trigger factor [Streptococcus sanguinis SK1087]
Length = 427
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEASKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELAEAKETAYNDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P +V E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMVHEEVHRAVNEFLGNMQRQGISPDMYFQITGTSQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASGEEIEAEVTSLATDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|170761090|ref|YP_001788552.1| trigger factor [Clostridium botulinum A3 str. Loch Maree]
gi|238688795|sp|B1L1D8|TIG_CLOBM RecName: Full=Trigger factor; Short=TF
gi|169408079|gb|ACA56490.1| trigger factor [Clostridium botulinum A3 str. Loch Maree]
Length = 430
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 197/437 (45%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L++ + S + ++ + + + N+ GFR GK PL+ IK YG+
Sbjct: 1 MNVKVENIEKNVVKLEITVDSEKFNEAVKKSFKKNAKRFNVPGFRKGKAPLNIIKKYYGE 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+ ++ P+ + + + + P I + + I D
Sbjct: 61 GVLFEDAINFCCEDTYPKAIEENNIKPVDYPQIDVVQ---------IGEGKDFIYTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+P++++ + ++V + EV+++ ++ ++ + + N F +E E E G+ +D+
Sbjct: 112 TVPEVKLGEYKGVEVKKVSYEVEDEAVENELKSMQEKNARVFLKEEGEIEKGNIAIIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E K+ + +GS + + LVGLK + KE+ FPE++ +DL GK
Sbjct: 172 GYVDGKAFEGGEAKDYEIEIGSGTFIGDFEDQLVGLKKDESKEVNVSFPEEYGREDLNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+IK++ ++++ A F++ ++ ++K+ + + + +
Sbjct: 232 PATFEVTIKDIKVKELPALDDEFAKEVSEFDTLEELKSDIKDRMKKELSEKAKAEYEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ + ++P+ ++E E +++ + + + +S +E+ +Y
Sbjct: 292 VEAVGANAEIEIPKVMIEKEIENMVRDLEMRLKYQGLDLKSYYEFTNSSEEKVKEYMRET 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV T +++ I + +I+ TEEE++ + ++ + + + L
Sbjct: 352 AEKRVKTDLIMQEIAKVEDIKATEEELKEKAMEVAKQYGQKDVEKTAELIANA-QKSYLE 410
Query: 414 APIFEDKVIDHILKSVQ 430
I KV+D ++++ +
Sbjct: 411 IDIVNGKVLDLLVENSK 427
>gi|213692579|ref|YP_002323165.1| trigger factor [Bifidobacterium longum subsp. infantis ATCC 15697]
gi|254788988|sp|B7GSV7|TIG_BIFLI RecName: Full=Trigger factor; Short=TF
gi|213524040|gb|ACJ52787.1| trigger factor [Bifidobacterium longum subsp. infantis ATCC 15697]
gi|320458731|dbj|BAJ69352.1| trigger factor [Bifidobacterium longum subsp. infantis ATCC 15697]
Length = 459
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 67/422 (15%), Positives = 161/422 (38%), Gaps = 24/422 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L V + L + ++I + N+ GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTVTVEPEELNPYLDAARKEIAKQVNVPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +++ + E+ + L ++ R +P + + LK + +
Sbjct: 61 AAVAGEAVNDAVPELYSKALDEKKIRPMAQPEFDVQD-----VPQSANDETKLKFTATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ D L++ EV ++++D+++ + + + + GD +D T
Sbjct: 116 RRPDIELPEIDGLEIAISKPEVKDEDVDKRLETLRQRFGTLVGVDRPAAKGDFANIDLTA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S++ V + +GS + E L GL G++ E + G+K
Sbjct: 176 EIDGETVD--SQEGVSYELGSNTMLDGLDEALDGLSAGEETTFEGTLEAG----EHEGQK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + ++++ A F++ ++ + Q +E + + +
Sbjct: 230 ATVKVKVNSVKAEELPELDDEFASEASEFDTLDELKADIRKAAAQDAEGRQATEARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VP+ + N L+ + + + + +E ++ +
Sbjct: 290 AKLQEGLEIPVPKGVKANMVEEQLKGL----------TPDPEKATKEQKAQAEETVEKDL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + EK +++V++ ++ + L ++ + K L +
Sbjct: 340 RDQMVLDALAEKLDVQVSQSDVFNFLASIAQQYGMDPNNFIQAIIKN-GQLGSAVQEVAR 398
Query: 419 DK 420
K
Sbjct: 399 SK 400
>gi|228477938|ref|ZP_04062551.1| trigger factor [Streptococcus salivarius SK126]
gi|228250331|gb|EEK09576.1| trigger factor [Streptococcus salivarius SK126]
Length = 427
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 88/441 (19%), Positives = 179/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + + I +++ + ++ ++ N GFR G +P + +G+
Sbjct: 1 MSVSFENTATNRGVVTFTIGQDKIQPALDQAFNKVKKNLNAPGFRKGHMPRAVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ I+ +++ +P I + IE D L
Sbjct: 61 EALYDDALNAILPAAYEAAIAELGLDVVAQPKIDVKS---------IEKGQDWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+V+ + EV ++E+D ++ KN VKE +E GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVSVEASKEVTDEEVDAKLENERKNLAELVVKEGAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + +N +GS + LVG K GD+ E++ FPED+ DLAGK
Sbjct: 172 GSVDGVEFDGGKGENHSLELGSGQFIPGFEDQLVGAKAGDEVEVKVTFPEDYQATDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 AAVFVTKVNEVKAKEVPALDDELAKDLDDEVETLDELKAKYRKELEAAKEIAYDDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
LD ++P +VE+E + + + M + E+ + Y
Sbjct: 292 ALDLAVENAEIVELPAEMVEDEVHRAMNEFMGNMQRQGISPEMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ + + TEEE+Q + + ++
Sbjct: 352 ADADKRVKTNLVIEAVAAAEGFDATEEEIQKEINDLAAEYNMEVSQVSALLSP-----EM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDITMKKAVEVITSTAKVK 427
>gi|293189651|ref|ZP_06608368.1| trigger factor [Actinomyces odontolyticus F0309]
gi|292821389|gb|EFF80331.1| trigger factor [Actinomyces odontolyticus F0309]
Length = 439
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 74/468 (15%), Positives = 185/468 (39%), Gaps = 36/468 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E K L V +P + ++ ++I + NI GFR G VP I +G+
Sbjct: 1 MKSTVETLEPTKVRLTVEVPFEEMKSEMDKAYKEIAGQVNIPGFRKGHVPPRIIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +++++ + +++ D R +P++ + E I + L D
Sbjct: 61 AAVIEQVVNQVLPGYYSDAVNENDLRPMAQPTVDVTE----IPNVTGPQGGQLVFTAEVD 116
Query: 120 ILPQIEISS-FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
++P E+ + L V + EV E+++++++ ++ + +++ GD T+D
Sbjct: 117 VVPAFELPEIDEKLVVEVEPTEVTEEDVEKELEDLRGRFATLKTINRKAKTGDFATIDLV 176
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D ++ S +V + +GS + L G K G++ + A
Sbjct: 177 ATIDGKQVD--SASDVSYEIGSGSMLDGQDTALRGTKAGEEVTFTSKLKGGEHEGEEAEV 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + LP ++ + F++ ++ ++ Q E + ++
Sbjct: 235 TITIKAMKTR---ELPKADDDFAQMVSEFDTIDELKEDLKKQAAQSKESQQALAARDALI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + +K +PES V+++ + + + + ++ +
Sbjct: 292 DLLLDKVEIVLPESAVDHQVEHRVGEDAK----------------PKAKKEAREAVEKEI 335
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T ++ + +K +++V+++E+ Q F ++ +A + A +
Sbjct: 336 RTELLSEALAKKFDVQVSQQELIDYAIQMSQNFGID----INQLFSSSQQMANVVADLGR 391
Query: 419 DKVIDHILKSVQIVD---RKVTFDQLFD--NSSESSPEKLLDKSSKVE 461
K + LK V + D V + F ++E E + + + + E
Sbjct: 392 SKALIEALKVVTVKDANGADVDLSKFFGTDPAAEEGAEIITEVADEQE 439
>gi|170755085|ref|YP_001782871.1| trigger factor [Clostridium botulinum B1 str. Okra]
gi|229558043|sp|B1IND8|TIG_CLOBK RecName: Full=Trigger factor; Short=TF
gi|169120297|gb|ACA44133.1| trigger factor [Clostridium botulinum B1 str. Okra]
Length = 430
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 196/437 (44%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L++ + S + ++ + + + N+ GFR GK PL+ IK YG+
Sbjct: 1 MNVKVENIEKNVVKLEITVDSEKFNEAVKKSFKKNAKRFNVPGFRKGKAPLNIIKKYYGE 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+ ++ P+ + + + + P I + + I D
Sbjct: 61 GVLFEDAINFCCEDTYPKAIEENNIKPVDYPQIDVVQ---------IGEGKDFIYTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+P++++ + ++V + EV+++ ++ ++ + + N +E E E G+ +D+
Sbjct: 112 TVPEVKLGEYKGVEVKKVSYEVEDEAVENELKSMQEKNARVSLKEEGEIEKGNIAIIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E K+ + +GS + + LVGLK + KE+ FPE++ +DL GK
Sbjct: 172 GYVDGKAFEGGEAKDYEIEIGSGTFIGDFEDQLVGLKKDESKEVNVSFPEEYGREDLNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+IK++ ++++ A F++ ++ ++K+ + + + +
Sbjct: 232 PATFEVTIKDIKVKELPALDDEFAKEVSEFDTLEELKSDIKDRMKKELSEKAKAEYEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ + ++P+ ++E E +++ + + + +S +E+ +Y
Sbjct: 292 VEAVGANAEIEIPKVMIEKEIENMVRDLEMRLKYQGLDLKSYYEFTNSSEEKVKEYMRET 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV T +++ I + +I+ TEEE++ + ++ + + A L
Sbjct: 352 AEKRVKTDLIMQEIAKVEDIKATEEELKEKAMEVAKQYGQKDVEKTAELIANA-QKAYLE 410
Query: 414 APIFEDKVIDHILKSVQ 430
I KV+D ++++ +
Sbjct: 411 IDIVNGKVLDLLVENSK 427
>gi|172037826|ref|YP_001804327.1| trigger factor [Cyanothece sp. ATCC 51142]
gi|171699280|gb|ACB52261.1| trigger factor [Cyanothece sp. ATCC 51142]
Length = 480
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 76/474 (16%), Positives = 182/474 (38%), Gaps = 27/474 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+V ++ + L++ IP+ ++ ++ + ANI GFR GKVP + G
Sbjct: 20 MKVTQEKLPDSQIGLEIEIPAETGKKAYETKVNTLARTANIPGFRKGKVPRPILLQRLGT 79
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ I + T++E++++ + + L + + ++ D + + D
Sbjct: 80 RYIKAVTLEELVQKSLEKALEQESIDSIGNYTL---RSSLDELIEKFKPGEPFTFLAAVD 136
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-------DK 172
+ P +E+ + L V + D ++++ E + E K
Sbjct: 137 VPPTVELGDYQTLSVKAEETVYDPQQLEDWFKERQEKLATLVPVEDRGAEMGDVAIVDYK 196
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
+ +E + + + E +VG+K + KE+ FP+D+
Sbjct: 197 GVSTPEGEGEGEPIEGVEGTDFRVDLEPGRFIEGMVEGIVGMKPEETKELPLTFPDDYPR 256
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQ 291
+DLAGK V ++KE+ + +++D A +E+ + +R ++ ++ +E +Q
Sbjct: 257 EDLAGKPVTFTITLKELKAKELPELDDDFAEEVSEYETIAELRESLEKQFQESAENETKQ 316
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED--LQY 349
+ I +S T D+P++LV++E +L + +M + + + +
Sbjct: 317 SIHTAITSELSKVCTVDLPDTLVQDEVTRVLTQTAMQMEQMGIDLGQLFTQENLPKLREN 376
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQS---ALYQQLGRFPGHEKKMLDHFQKYP 406
A R+ ++L I + I + + E++ + +QL K+ +
Sbjct: 377 ARPEAIERLKQTLILQEIAKVEAITLEDSEIEERSNEIKEQLQGQEVDPDKLRE------ 430
Query: 407 NALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKV 460
+ + +K ++ + + + + + S E+ +
Sbjct: 431 ----VIEEQLTTEKTLNWLQEKATVELVPKGTLEAEKETESESGEEPTNTQETE 480
>gi|225019942|ref|ZP_03709134.1| hypothetical protein CLOSTMETH_03896 [Clostridium methylpentosum
DSM 5476]
gi|224947306|gb|EEG28515.1| hypothetical protein CLOSTMETH_03896 [Clostridium methylpentosum
DSM 5476]
Length = 440
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 78/443 (17%), Positives = 187/443 (42%), Gaps = 21/443 (4%)
Query: 11 LKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-LSETIDE 69
K E++V + + + N K N+ GFR GK P ++ +YG+SI + ID
Sbjct: 12 NKYEVEVSVDAATFDTACNAAYRKNIKKINVPGFRRGKAPRKIVEKMYGESIFFDDAIDA 71
Query: 70 IIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSF 129
+ + + E + + S+ E ++ L + + P +E+ +
Sbjct: 72 VYPKALSEAIEEAGLDVIAVESLEPIEASAE---------KGLSFKATCITKPVVEVKDY 122
Query: 130 DDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYTVSVDNVILED 188
++VT+ + V ++++ ++ ++ + N V++ ++ GD T D+ +D E
Sbjct: 123 KGIKVTKSVKTVSDEDVAAELDKMRERNGRVIIVEDRPAQDGDMATFDFEGFLDGEAFEG 182
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKE 248
+ +GS E +VG G++ ++ FPED+ ++L G+ + E
Sbjct: 183 GKAEKYTLKLGSGQFIPGFEEQIVGKSIGEEFDVNVTFPEDYHAEELKGQSCLFKCKLHE 242
Query: 249 VFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
+ + +++ A F++ ++ + +++ + + V+ QI+ + T
Sbjct: 243 LKATELPDADDEFAKDVSEFDTLDELKVDIKKHLEEQNAKAMEADVEEQIIGNVVENMTG 302
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH----MLAKRRVLTGIV 363
++PE + E + +++ + +SS + +D + A+++V +
Sbjct: 303 EIPEVMYEKRIDELMRDFEYRLSSQGMNLEMYMQYTGQDREAIRGQFLPQAEKQVKVRLA 362
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
L + E +EV EEE+ + + ++ E K+ + + A+L+ + +KVI
Sbjct: 363 LEKVVELEKVEVPEEELSAEYAKLAEQYKMEEDKVRGYIPE-----ADLKLDLAVNKVIA 417
Query: 424 HILKSVQIVDRKVTFDQLFDNSS 446
+ S I + + + ++
Sbjct: 418 MLKDSADITEVEEVKEDEAKDAE 440
>gi|153938157|ref|YP_001392583.1| trigger factor [Clostridium botulinum F str. Langeland]
gi|166229038|sp|A7GIH3|TIG_CLOBL RecName: Full=Trigger factor; Short=TF
gi|152934053|gb|ABS39551.1| trigger factor [Clostridium botulinum F str. Langeland]
gi|295320567|gb|ADG00945.1| trigger factor [Clostridium botulinum F str. 230613]
Length = 430
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 196/437 (44%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L++ + S + ++ + + + N+ GFR GK PL+ IK YG+
Sbjct: 1 MNVKVENIEKNVVKLEITVDSEKFNEAVKKSFKKNAKRFNVPGFRKGKAPLNIIKKYYGE 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+ ++ P+ + + + + P I + + I D
Sbjct: 61 GVLFEDAINFCCEDTYPKAIEENNIKPVDYPQIDVVQ---------IGEGKDFIYTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+P++++ + ++V + EV+++ ++ ++ + + N +E E E G+ +D+
Sbjct: 112 TVPEVKLGEYKGVEVKKVSYEVEDEAVENELKSMQEKNARVSLKEEGEIEKGNIAIIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E K+ + +GS + + LVGLK + KE+ FPE++ +DL GK
Sbjct: 172 GYVDGKAFEGGEAKDYEIEIGSGTFIGDFEDQLVGLKKDESKEVNVSFPEEYGREDLNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+IK++ ++++ A F++ ++ ++K+ + + + +
Sbjct: 232 PATFEATIKDIKVKELPALDDEFAKEVSEFDTLEELKSDIKDRMKKELSEKAKAEYEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ + ++P+ ++E E +++ + + + +S +E+ +Y
Sbjct: 292 VEAVGANAEIEIPKVMIEKEIENMVRDLEMRLKYQGLDLKSYYEFTNSSEEKVKEYMRET 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV T +++ I + +I+ TEEE++ + ++ + + A L
Sbjct: 352 AEKRVKTDLIMQEIAKVEDIKATEEELKEKAMEVAKQYGQKDVEKTAELIANA-QKAYLE 410
Query: 414 APIFEDKVIDHILKSVQ 430
I KV+D ++++ +
Sbjct: 411 IDIVNGKVLDLLVENSK 427
>gi|209560046|ref|YP_002286518.1| trigger factor [Streptococcus pyogenes NZ131]
gi|226738694|sp|B5XIG1|TIG_STRPZ RecName: Full=Trigger factor; Short=TF
gi|209541247|gb|ACI61823.1| Cell division trigger factor tig [Streptococcus pyogenes NZ131]
Length = 427
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 169/441 (38%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTISQDKIKPALDKAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 61 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGKEWTLSAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V D EV ++++D ++ +N +K+ E+ GD V +D+
Sbjct: 112 TKPEVKLGDYKNLVVEVDASKEVSDEDVDAKIERERQNLAELIIKDGEAAQGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K GD+ E+ FPE + +DLAGK
Sbjct: 172 GSVDGVEFDAGKGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEF---LVRQKVKR 295
+ +I EV + ++++LA + + ++ + + +
Sbjct: 232 AAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETSYDDAVEGA 291
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
I ++N D+PE ++ E N + + M + E+ Y
Sbjct: 292 AIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQRQGISPEMYFQLTGTTQEDLHNPYS 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E T+ E++ + + ++
Sbjct: 352 AEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATEYNMPADQVRSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDIAMKKAVEVITSTASVK 427
>gi|227874918|ref|ZP_03993070.1| FKBP family peptidyl-prolyl cis-trans isomerase (trigger factor)
[Mobiluncus mulieris ATCC 35243]
gi|227844495|gb|EEJ54652.1| FKBP family peptidyl-prolyl cis-trans isomerase (trigger factor)
[Mobiluncus mulieris ATCC 35243]
Length = 443
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 72/470 (15%), Positives = 187/470 (39%), Gaps = 32/470 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K ++ V +P ++ ++ + NI GFR G+ P ++S G+
Sbjct: 1 MKSTVENLNPTKVKITVEVPYEEFKPEMDKVFKEYSKQMNIPGFRRGRAPARVVESYVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ++ + E +++ + +P+I + SD + DLK + +
Sbjct: 61 GAVIEDAVNHAMPEYYGQVVEENKLAPLGKPAIEV----SDTPNIEGNAGGDLKFSVEVE 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P++++ F +++ + EV ++++ ++ + + + + E + D VT+D
Sbjct: 117 IRPEVKLPEFSGIELEVEPVEVKAEDVEEELTALRRRFASLKSVERAVKDEDFVTIDVVT 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ +++ ++ + + GS + + L GLK G+ KE + + A
Sbjct: 177 KQGDEEIDNMTQVSYRV--GSGGILDGLDDALKGLKAGEVKEFKTQLKSGPHGGEEA--- 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
N + V + ++++ A+ ++ R + + + + +++
Sbjct: 232 -LANVVLGSVKEQVLPELDDEFAMMVSDHDTIDDFRKEMEETVTKQKRAEQALDARDKLV 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ F +PE +VE+ +++ +E+ Q L ++ +
Sbjct: 291 QKLVGDLEFPLPEGVVEDTLATQVRE----------------EDSDEEKQRVRELVEKDL 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T I+L T+ EK + VT+EE+ + Q + +L ++ N + I
Sbjct: 335 KTQIILDTLAEKRQMNVTQEELLQFILQTAQTYGMDPSALLSSAEQN-NRIPAFIQEIAR 393
Query: 419 DKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+K I L V + D ++ + + + + ++ ++
Sbjct: 394 NKAIAAALSEVSVKDTKGQELDLSEFIGLDEDDDADAADESGAESAETEA 443
>gi|307701793|ref|ZP_07638807.1| trigger factor [Mobiluncus mulieris FB024-16]
gi|307613051|gb|EFN92306.1| trigger factor [Mobiluncus mulieris FB024-16]
Length = 443
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 72/470 (15%), Positives = 187/470 (39%), Gaps = 32/470 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K ++ V +P ++ ++ + NI GFR G+ P ++S G+
Sbjct: 1 MKSTVENLNPTKVKITVEVPYEEFKPEMDKVFKEYSKQMNIPGFRRGRAPARVVESYVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ++ + E +++ + +P+I + SD + DLK + +
Sbjct: 61 GAVIEDAVNHAMPEYYGQVVEENKLAPLGKPAIEV----SDTPNIEGNAGGDLKFSVEVE 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P++++ F +++ + EV ++++ ++ + + + + E + D VT+D
Sbjct: 117 IRPEVKLPEFSGIELEVEPVEVKAEDVEEELTALRRRFASLKSVERAVKDEDFVTIDVVT 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ +++ ++ + + GS + + L GLK G+ KE + + A
Sbjct: 177 KQGDEEIDNMTQVSYRV--GSGGILDGLDDALKGLKAGEVKEFKTQLKSGPHGGEEA--- 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
N + V + ++++ A+ ++ R + + + + +++
Sbjct: 232 -LANVVLGSVKEQILPELDDEFAMMVSDHDTIDDFRKEMEETVTKQKRAEQALDARDKLV 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ F +PE +VE+ +++ +E+ Q L ++ +
Sbjct: 291 QKLVGDLEFPLPEGVVEDTLATQVRE----------------EDSDEEKQRVRELVEKDL 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T I+L T+ EK + VT+EE+ + Q + +L ++ N + I
Sbjct: 335 KTQIILDTLAEKRQMNVTQEELLQFILQTAQTYGMDPSALLSSAEQN-NRIPAFIQEIAR 393
Query: 419 DKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+K I L V + D ++ + + + + ++ ++
Sbjct: 394 NKAIAAALSEVSVKDTKGQELDLSEFIGLDEDDDADAADESGAESAETEA 443
>gi|254424391|ref|ZP_05038109.1| trigger factor [Synechococcus sp. PCC 7335]
gi|196191880|gb|EDX86844.1| trigger factor [Synechococcus sp. PCC 7335]
Length = 487
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 86/481 (17%), Positives = 197/481 (40%), Gaps = 29/481 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + L++ +P+ + + + D ANI GFR GKVP + G
Sbjct: 1 MKVTQENLPDSQVGLEIEVPAELSKQGYEKVLRDYMKSANIPGFRKGKVPRQILIQRIGA 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++++++ ++ + + + + A + + + + ++ S D
Sbjct: 61 VQLKAAALEDMLQTVIEKAIKQEEIEALGNYQL---QSDFESLVSSYTPGEPFVIKASVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG------DKV 173
+ P++ +S + DL V + + + +D + +N E + D V
Sbjct: 118 VPPRVALSKYKDLSVKAEEVKPKDSRVDETIEGYRENLATLVPVEDRTAKEGDVTVVDFV 177
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
S + E S ++ Q + E +VG+K + KE+E FPED+
Sbjct: 178 GKAANESGELEEFEGGSAQDFQVEIKEGRFIPGFVEGIVGMKLEESKEVEVTFPEDYPQA 237
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQK 292
+LAGK ++KE+ +++D A FE+ +R ++ ++ + +
Sbjct: 238 ELAGKPATFEITLKELKEKELPDLDDDFAEEVSEFETLEELRQSLEERYQEEAIATTDRN 297
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYY 350
++ +L+ + ++P+SLV E + I+ + ++S + + + +
Sbjct: 298 IEEALLNELVKHVEAEIPKSLVMREVDFIVTQTVMQLSRQGIDINQFLTKELVDNMRESS 357
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A R+ + LG I ++ +I VT+EE+ + + ++ D Q P L
Sbjct: 358 KPEAIERLRRTLALGEIAKQESIAVTDEEVTERTEEMMA-------EVDDPSQVDPERLN 410
Query: 411 ELRA-PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
++ + ++K++ + ++ +I +L S + E D S +T +
Sbjct: 411 QVVNEDLLKEKILAWLKENSEI--------ELVPEGSLAPEETPEDPSESADTDAESASV 462
Query: 470 S 470
S
Sbjct: 463 S 463
>gi|296453937|ref|YP_003661080.1| trigger factor [Bifidobacterium longum subsp. longum JDM301]
gi|296183368|gb|ADH00250.1| trigger factor [Bifidobacterium longum subsp. longum JDM301]
Length = 459
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 66/416 (15%), Positives = 161/416 (38%), Gaps = 23/416 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L V + L + ++I + N+ GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTVTVEPEELNPYLDAARKEIAKQVNVPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +++ + E+ + L ++ R +P + + LK + +
Sbjct: 61 AAVAGEAVNDAVPELYSKALDEKKIRPMAQPEFDVQD-----VPQSANDETKLKFTATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ D L++ EV ++++D+++ + + + + GD +D T
Sbjct: 116 RRPDIELPEIDGLEIAISKPEVKDEDVDKRLETLRQRFGTLVGVDRPAAKGDFANIDLTA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S++ V + +GS + E L GL G++ E + G+K
Sbjct: 176 EIDGETVD--SQEGVSYELGSNTMLDGLDEALDGLSAGEETTFEGTLEAG----EHEGQK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +N++ A F++ ++ + Q +E + + +
Sbjct: 230 ATVKVKVNSVKAEELPELNDEFASEASEFDTLDELKADIRKAAAQDAEGRQATEARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VP+ + N L+ + + + + +E ++ +
Sbjct: 290 AKLQEGLEIPVPKGVKANMVEEQLKGM----------TPDPEKATKEQKAQAEETVEKDL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+VL + EK +++V++ ++ + L ++ + K + ++
Sbjct: 340 RDQMVLDALAEKLDVQVSQSDVFNFLASIAQQYGMDPNNFIQAIIKNGQLGSAVQE 395
>gi|189439552|ref|YP_001954633.1| trigger factor [Bifidobacterium longum DJO10A]
gi|227546006|ref|ZP_03976055.1| trigger factor [Bifidobacterium longum subsp. infantis ATCC 55813]
gi|239621938|ref|ZP_04664969.1| trigger factor [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|317482292|ref|ZP_07941313.1| hypothetical protein HMPREF0177_00706 [Bifidobacterium sp.
12_1_47BFAA]
gi|322688887|ref|YP_004208621.1| trigger factor [Bifidobacterium longum subsp. infantis 157F]
gi|322690862|ref|YP_004220432.1| trigger factor [Bifidobacterium longum subsp. longum JCM 1217]
gi|238692065|sp|B3DSL6|TIG_BIFLD RecName: Full=Trigger factor; Short=TF
gi|189427987|gb|ACD98135.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Bifidobacterium
longum DJO10A]
gi|227213640|gb|EEI81489.1| trigger factor [Bifidobacterium longum subsp. infantis ATCC 55813]
gi|239515129|gb|EEQ54996.1| trigger factor [Bifidobacterium longum subsp. infantis CCUG 52486]
gi|316916308|gb|EFV37709.1| hypothetical protein HMPREF0177_00706 [Bifidobacterium sp.
12_1_47BFAA]
gi|320455718|dbj|BAJ66340.1| trigger factor [Bifidobacterium longum subsp. longum JCM 1217]
gi|320460223|dbj|BAJ70843.1| trigger factor [Bifidobacterium longum subsp. infantis 157F]
Length = 459
Score = 175 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 73/475 (15%), Positives = 179/475 (37%), Gaps = 26/475 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L V + L + ++I + N+ GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTVTVEPEELNPYLDAARKEIAKQVNVPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +++ + E+ + L ++ R +P + + LK + +
Sbjct: 61 AAVAGEAVNDAVPELYSKALDEKKIRPMAQPEFDVQD-----VPQSANDETKLKFTATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ D L++ EV ++++D+++ + + + + GD +D T
Sbjct: 116 RRPDIELPEIDGLEIAISKPEVKDEDVDKRLETLRQRFGTLVGVDRPAAKGDFANIDLTA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S++ V + +GS + E L GL G++ E + G+K
Sbjct: 176 EIDGETVD--SQEGVSYELGSNTMLDGLDEALDGLSAGEETTFEGTLEAG----EHEGQK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +N++ A F++ ++ + Q +E + + +
Sbjct: 230 ATVKVKVNSVKAEELPELNDEFASEASEFDTLDELKADIRKAAAQDAEGRQATEARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VP+ + N L+ + + + + +E ++ +
Sbjct: 290 AKLQEGLEIPVPKGVKANMVEEQLKGM----------TPDPEKATKEQKAQAEETVEKDL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + EK +++V++ ++ + L ++ + K L +
Sbjct: 340 RDQMVLDALAEKLDVQVSQSDVFNFLASIAQQYGMDPNNFIQAIIKN-GQLGSAVQEVGR 398
Query: 419 DKVIDHILKSVQIVD--RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + +++V+ V ++E + ++ +S E + +
Sbjct: 399 SKGLLAGMRAVKFTADGEVVDLSAFLGEAAEDEESESVEAASAAAAVADELSAKD 453
>gi|224283332|ref|ZP_03646654.1| trigger factor [Bifidobacterium bifidum NCIMB 41171]
gi|310287701|ref|YP_003938959.1| Trigger factor [Bifidobacterium bifidum S17]
gi|313140483|ref|ZP_07802676.1| trigger factor [Bifidobacterium bifidum NCIMB 41171]
gi|309251637|gb|ADO53385.1| Trigger factor [Bifidobacterium bifidum S17]
gi|313132993|gb|EFR50610.1| trigger factor [Bifidobacterium bifidum NCIMB 41171]
Length = 461
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 60/416 (14%), Positives = 156/416 (37%), Gaps = 23/416 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L + + + ++I + NI GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTITVDPEEFNPYLDAARKEIAKQVNIPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + E+ + L ++ +P I + E + LK + +
Sbjct: 61 AAVAGEAVNNGVPELYSKALEEKKIHPMSQPEIDVQE-----VPESAKDETKLKFTATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ D L++ +V +++++ ++ + + + + GD +D
Sbjct: 116 RRPDIELPELDGLEIDVPKAQVTDEDVNNRLESLRQRFGTLVGVDRPAAKGDFANIDLDA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S++ V + +GS + E L GL G++ + G++
Sbjct: 176 QIDGESVD--SQEGVSYELGSGTMLDGLDEALEGLSAGEETSFN----SKLQGGEHEGEE 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +++D A F++ ++ + ++ +E + + +
Sbjct: 230 ALVKVKVNSVKTEELPELDDDFAQDASEFDTLDELKADVRKAAERDAEGRQATEARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VP+ + + L+ V + + +E + +
Sbjct: 290 AKLEEGAEIPVPKGVKADMLEQQLKNV----------TADPSKATDEQKADAEKQVVKEL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+VL + EK +++V++ ++ + L ++ + K + ++
Sbjct: 340 TDQMVLDALAEKLDVKVSQADVTNFLASIAQQYGMDPSAFIQAIVKNGQLGSAVQE 395
>gi|168179118|ref|ZP_02613782.1| trigger factor [Clostridium botulinum NCTC 2916]
gi|226950660|ref|YP_002805751.1| trigger factor [Clostridium botulinum A2 str. Kyoto]
gi|254788994|sp|C1FLA7|TIG_CLOBJ RecName: Full=Trigger factor; Short=TF
gi|182670109|gb|EDT82085.1| trigger factor [Clostridium botulinum NCTC 2916]
gi|226843712|gb|ACO86378.1| trigger factor [Clostridium botulinum A2 str. Kyoto]
Length = 430
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 82/437 (18%), Positives = 196/437 (44%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L++ + S + ++ + + + N+ GFR GK PL+ IK YG+
Sbjct: 1 MNVKVENIEKNVVKLEITVDSEKFNEAVKKSFKKNAKRFNVPGFRKGKAPLNIIKKYYGE 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+ ++ P+ + + + + P I + + I D
Sbjct: 61 GVLFEDAINFCCEDTYPKAIEENNIKPVDYPQIDVVQ---------IGEGKDFIYTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+P++++ + ++V + EV+++ ++ ++ + + N +E E E G+ +D+
Sbjct: 112 TVPKVKLGEYKGVEVKKVSYEVEDEAVENELKSMQEKNARVSLKEEGEIEKGNIAIIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E K+ + +GS + + LVGLK + KE+ FPE++ +DL GK
Sbjct: 172 GYVDGKAFEGGEAKDYEIEIGSGTFIGDFEDQLVGLKKDESKEVNVSFPEEYGREDLNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+IK++ ++++ A F++ ++ ++K+ + + + +
Sbjct: 232 PATFEVTIKDIKVKELPALDDEFAKEVSEFDTLEELKSDIKDRMKKELSEKAKAEYEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ + ++P+ ++E E +++ + + + +S +E+ +Y
Sbjct: 292 VEAVGANAEIEIPKVMIEKEIENMVRDLEMRLKYQGLDLKSYYEFTNSSEEKVKEYMRET 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV T +++ I + +I+ TEEE++ + ++ + + A L
Sbjct: 352 AEKRVKTDLIMQEIAKVEDIKATEEELKEKAMEVAKQYGQKDVEKTAELIANA-QKAYLE 410
Query: 414 APIFEDKVIDHILKSVQ 430
I KV+D +++S +
Sbjct: 411 IDIVNGKVLDLLVESSK 427
>gi|256028614|ref|ZP_05442448.1| trigger factor, PPIase [Fusobacterium sp. D11]
gi|289766532|ref|ZP_06525910.1| trigger factor ppiase [Fusobacterium sp. D11]
gi|289718087|gb|EFD82099.1| trigger factor ppiase [Fusobacterium sp. D11]
Length = 431
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 85/440 (19%), Positives = 180/440 (40%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E E+ + + + + ++ + + A + GFR G P + + Y
Sbjct: 1 MNYEVKKLEKSAVEVKLHLTAEEVKPIVDKVLAHVGEHAEVAGFRKGHAPKEVLMANYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++ ++ I P+I+ K + + I DL L D+
Sbjct: 61 HIENDVANDAINANFPQIVDKEKLQPVSY-----------VRLKEINLKDDLNLTFDIDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE---TESEIGDKVTVDY 177
PQ E+ ++ L+ + E+ + ++ ++ + +N+ E E ++++ D V + +
Sbjct: 110 YPQFELGNYKGLEAEKKSFEMTDDILNEELEIMVRNHAKLEEVEDAGYKAQLNDTVDLAF 169
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D V ++ +GS E LVG G + EI FP+++ +LAG
Sbjct: 170 EGFMDGVPFPGGKAESHLLKLGSKSFIDNFEEQLVGYTKGQEGEITVKFPDEYHAPELAG 229
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + I + +N++ A LG+ S ++ ++ + + + +
Sbjct: 230 KPAQFKVKINAIKKLKQPELNDEFAKELGYASLDELKAKTKEETIKRENDRIENEYVSAL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
LD + T DVP S+V+ E L+++ +++S K + + E
Sbjct: 290 LDKLMETTTIDVPVSMVQAEIQNRLKELEYQLSMQGFKMDDYLKMMGGNVETFAAQLAPA 349
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LA 410
A+++V ++L I + NN E T+EE+ + + + + + +K N A
Sbjct: 350 AEKKVKVDLILDRIAKDNNFEATDEELSQRMEEVAKMYGMDVPALEEELKKNKNLENFKA 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++ I K ID ++K+ +
Sbjct: 410 SVKYDIVMKKAIDEVVKNSK 429
>gi|168335355|ref|ZP_02693450.1| trigger factor [Epulopiscium sp. 'N.t. morphotype B']
Length = 436
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 81/442 (18%), Positives = 193/442 (43%), Gaps = 16/442 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + E K L V + + + + N+ +++ K N+ GFR GKVP + I+ +YG
Sbjct: 1 MKISLEKLENSKICLTVEVEKDVVDRALNKAYSEMKGKFNVPGFRKGKVPRNMIEKMYGA 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + II + + + + R + + T + +
Sbjct: 61 QVFYDDAANNIINGTLDNAIKENNVEVVAR-------LKYGDIQVVEMNTEKCIYKATIT 113
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ PQI + + +L++ + +V ++E++ + + A N +V++ E D VT+D+
Sbjct: 114 VRPQIILGEYKNLEIEAEKLDVTDEEVNEYIEQEAAKNAREIKVEDREIRPQDIVTIDFE 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E+ S +N + ++GS + L+G GD+ E+ FPED+ +DL GK
Sbjct: 174 GFVDGEAFENGSAENHRLVIGSKSFIPGFEDQLIGKNVGDEVEVNVTFPEDYHAEDLKGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDL-AVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
IK+++ +N+D A F++ + + I + + ++ ++
Sbjct: 234 DAMFKVKIKDLYYTELPEINDDFVADVSEFDTLDEYKEDIKKNIAETKASNRKNEITNKV 293
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ + TF++P +V+ E +++ M ++ + +
Sbjct: 294 MQKAAENATFELPVEMVDEEIERNVEQFAQNMQKQGINLDQYLEYTDIDRDKFKENFREQ 353
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A ++ ++L I ++ N+E+ +E+ + L ++ ++ + + N ++
Sbjct: 354 AVTQLSNTLILEEIVKQENLEINDEDFEKELERRAVQYRMEIDQFKEKI--NDNYKESIK 411
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
+ K ID ++++ +I++ +
Sbjct: 412 NDLKMQKAIDLLVETAKIIENE 433
>gi|159030459|emb|CAO91361.1| tig [Microcystis aeruginosa PCC 7806]
Length = 464
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 80/440 (18%), Positives = 178/440 (40%), Gaps = 19/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+VI++ + L++ IP+ ++ + ++D+ ANI GFRPGKVP + G
Sbjct: 1 MKVIQEKLPASQIGLEIEIPAETTKNTHEKVVKDLAKSANIPGFRPGKVPRQILLQRLGT 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
K++ + I+E+I+ + L + + P + + + E L +S D
Sbjct: 61 KAVKAAVIEELIENCLESALKQEGIESLGNPQL---LSQFEDLIAAYEPGKALTFSVSVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVD 176
+ P I + +++L VT + D + ++ E + E V
Sbjct: 118 VAPTIILGDYENLSVTAEETVYDPESVENWFKERQEQLATLVPVEDRGAQLGDVAIVDYR 177
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ + D ++++ + + E +VG+K + KE+ FPED+ +D+A
Sbjct: 178 GKSAETGEDIPDIDGEDLRVDMEAGRFIEGMVEGIVGMKPEEVKEMTLTFPEDYPKEDVA 237
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K V ++KE+ + +++D A E+ + +R ++ ++ +E ++ +
Sbjct: 238 AKAVIFTITMKELKAKELPELDDDFAQEVSDQETIAELRASLEKRFQEQAEKETKESIYD 297
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED--LQYYHML 353
+ + T D+PE+L+E E IL + E + + D +
Sbjct: 298 ALTKELVKGATLDLPETLIEKEVTHILTQSFMEFQQMGLDVNQLFTKDNIPKMRESTRPD 357
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE-L 412
A + +V+ + + IEV+ E + + + + + + L + +
Sbjct: 358 AIESLKETLVVQELAKVAGIEVSPEAVTEKIAKIMAQLSDRDI--------DRQRLEQVI 409
Query: 413 RAPIFEDKVIDHILKSVQIV 432
I + ++ + + I
Sbjct: 410 TEEILAENTLEWLKEKATIT 429
>gi|186681334|ref|YP_001864530.1| trigger factor [Nostoc punctiforme PCC 73102]
gi|238691193|sp|B2IT89|TIG_NOSP7 RecName: Full=Trigger factor; Short=TF
gi|186463786|gb|ACC79587.1| trigger factor [Nostoc punctiforme PCC 73102]
Length = 480
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 86/491 (17%), Positives = 201/491 (40%), Gaps = 31/491 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+V ++ + L++ I ++ + I+++ S ANI GFR GKVP + G
Sbjct: 1 MKVTQEKLPASQIGLEIEITPEITKQTYEQVIKNLASTANIPGFRRGKVPRPILLQRLGT 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + ++E+I++ + + + + A +P + + E L + + D
Sbjct: 61 TRIKAAALEELIQDGIEQAVKQEAIPAIGQPQL---RSSFEDLINNYEPGKPLTILAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV---- 175
+ P++ + + DL + + D +++D + + + E S + V
Sbjct: 118 VEPEVNLVQYTDLLFQAEEVKYDPEQVDSSLEKERQELATLIPVEGRSAQIGDIAVVDFK 177
Query: 176 -------DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPE 228
+ + + + Q + +VG+ + +EI FP+
Sbjct: 178 GSFAKAEGEDETAELEPIPGAEATDFQVELQEDKFIPGFISGIVGMNPEETREIAAQFPD 237
Query: 229 DHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEF 287
++ +DLAGK ++KE+ +N+D A FE+ +R ++ ++ ++
Sbjct: 238 PYANEDLAGKAATFIVTLKELKEKELPEINDDFAQEISDFETLEELRASLVERYQKEADD 297
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EE 345
+ + +L + D+P +LVE E + +L + +S + + + D +
Sbjct: 298 KTKTNKQEALLTELLKHVEVDLPLTLVEQEVDAMLTQTAMRLSQQGLDVRKLFTQDIIPQ 357
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ A R+ + L +G++ +IEVT EE+ + + L ++P ++ D +
Sbjct: 358 LRERSRTEAIERIKRSLSLREVGKRESIEVTPEEIGVRVKELLEQYPEEKEVDEDRLRSI 417
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIV---DRKVTFDQLFDNSSESSPEKLLDKSSKVET 462
+ + +K ID +L+ + + ++ + +E++ S+ E
Sbjct: 418 ------VENELLTEKTIDWLLEHSSVELVPEGSLSPAE----ETEAAESDADADVSQTEQ 467
Query: 463 FQSEEAPSEIS 473
SE + +E++
Sbjct: 468 ENSEPSTTEVT 478
>gi|150016208|ref|YP_001308462.1| trigger factor [Clostridium beijerinckii NCIMB 8052]
gi|189035932|sp|A6LT26|TIG_CLOB8 RecName: Full=Trigger factor; Short=TF
gi|149902673|gb|ABR33506.1| trigger factor [Clostridium beijerinckii NCIMB 8052]
Length = 427
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 86/438 (19%), Positives = 187/438 (42%), Gaps = 19/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E +L++ + + + + + + + NI GFR GKVP++ +K YG
Sbjct: 1 MKAKVEKIETNVIKLEIRVEAEKFDAALTKAYNKNKGRYNIPGFRKGKVPMAMVKKFYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ I E PE L+ + + P + I E + +L +
Sbjct: 61 EVFYDDAVNFAIDESYPEALNAENIKPVDYPQVDIVE---------LGEGKELVYTATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
P++E+ + L + + I EV++ EID+Q+ E+ + N EVK + D +D+
Sbjct: 112 TYPEVELGEYKGLDIKKPIYEVEDTEIDKQIKEMQEKNARIEVKTEGNIAKGDIAVIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D V E + +GS E L+GL GD+KE+ FPE + ++L GK
Sbjct: 172 GYIDGVAFEGGEGSDYSLEIGSGTFIDNFEEQLIGLAVGDKKEVNVTFPEAYGKEELNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
IK + ++++ A ++ + ++ + ++++++ ++ + +
Sbjct: 232 PAMFEVEIKSIKVKELPELDDEFAKDVSAVDTFAELKENLKKTLEKNNDEKAEREFEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
+ + D+PE +V E + ++Q + + + E+ +
Sbjct: 292 ITAVIENSKMDIPEVMVNKEIDAMMQDLEGRLKYQGLSLEQYMEFTGNTTEKMRDFMKEN 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAEL 412
A+R+V +VL I + I+ TEEE+ + + + P +KM K + +
Sbjct: 352 AERKVKADLVLEAIAKTEEIKATEEELNARALELGKIYGPKDPEKMAKILVK--SQRNMI 409
Query: 413 RAPIFEDKVIDHILKSVQ 430
I + + + ++ +
Sbjct: 410 EKDIILENTLKFLKENCK 427
>gi|255326611|ref|ZP_05367688.1| trigger factor [Rothia mucilaginosa ATCC 25296]
gi|255296351|gb|EET75691.1| trigger factor [Rothia mucilaginosa ATCC 25296]
Length = 433
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 68/455 (14%), Positives = 167/455 (36%), Gaps = 24/455 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + +++V +P + +++ + ++ GFR GK+P I+ G
Sbjct: 1 MKTAVEKLNPTLAKIEVEVPFAEFKPYLDRTYKNLSGQISVPGFRKGKLPKQLIEQRAGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I+ ++++ + + + L + + +P + + D+KL ++
Sbjct: 61 DYIVEASLNDALNDYYAQALGENELSPLAQPELDVQSQ-----PSTENREADVKLTITVT 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IE+ +++ L+V D EV ++ + + + + + E + D VT+D
Sbjct: 116 VRPEIELPNYEGLEVEVDEVEVTAEDEVQALDALRERFGTLKTVERPAADKDFVTIDIAA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ + ++ + +GS + E L GL G+ E S + AG++
Sbjct: 176 EIDGEQVD--AANDLSYQIGSGTMLDGIDEALTGLSAGEDATFE----TKLSGGEHAGEQ 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V +++ A F++ ++ +++ + + + ++L
Sbjct: 230 AVIKVKLSAVKERELPAADDEFAQLASEFDTIDELKEDIKKQVAEAKVAEQGTQARDKVL 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VPE ++E++ N + D EE +
Sbjct: 290 AKLVELVEIPVPEKVIEDQLEQHF----------NNPNAEADHDTEEHRAEVRENTETAF 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + +K + V + EM + + ++ + L +
Sbjct: 340 KNEMVLDAVADKEEVTVDQAEMINYIITMSSQYGMDPNQFAQMLDGS-GQAGALVGEVRR 398
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKL 453
K + +LK+ + D K L E
Sbjct: 399 SKALAAVLKTAVVKDTKGNVVDLSKYLGEGEEAAA 433
>gi|237734813|ref|ZP_04565294.1| trigger factor [Mollicutes bacterium D7]
gi|229382141|gb|EEO32232.1| trigger factor [Coprobacillus sp. D7]
Length = 426
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 87/439 (19%), Positives = 186/439 (42%), Gaps = 22/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ K E EL V S + + ++ + I GFRPGK P + +++ K
Sbjct: 1 MKINNKKLENAIVELTVAFDSEEWKATQEKALDKLAKNVKIDGFRPGKAPAAMVRARVSK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
S+L E D I++ EIL++ + +P++++ + ++D +L++++
Sbjct: 61 ASVLEEATDMILQTKFVEILTEANVEPVAQPALSVQKVDAD----------ELEVQILVP 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ PQ+E+ + L+V + V +KEI+ Q+A + + GD +D+
Sbjct: 111 VKPQVELGEYKGLEVKKGRVTVTKKEIEEQLANYQTQFAELTVKEGGKVAKGDTAVIDFE 170
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N +GS + ++G+ +++I FPED+ DLAGK
Sbjct: 171 GFVDGVAFEGGKGENYPLEIGSGSFIPGFEDQVIGMTVDKEQDIVVTFPEDYGAADLAGK 230
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG---FESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ ++ E+ ++++LA + E+ ++ IK E K
Sbjct: 231 EATFKVTVHEIKEKHLPEIDDELAKDVNIDGVETLDQLKDHIKANIKTRKESENENKFMD 290
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+ I + ++L+E E +LQ++ + Q ++ +
Sbjct: 291 DLYKAIVASSKVEDSDALLEQEQGLMLQEIEQNLQRQGLNFEVYQQFTGKSKDDIKEDIK 350
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ RV +L I E+ + V++EE+++ L + ++ F+ ++
Sbjct: 351 PQAEERVKLNAILAAIIEEEKLAVSDEELETELKTIAEYYQKELDEVKKIFEGN---MSR 407
Query: 412 LRAPIFEDKVIDHILKSVQ 430
+ + K +D + +++
Sbjct: 408 IENDLLTRKAVDLVKDNLK 426
>gi|229552141|ref|ZP_04440866.1| cell division trigger factor [Lactobacillus rhamnosus LMS2-1]
gi|258508346|ref|YP_003171097.1| trigger factor [Lactobacillus rhamnosus GG]
gi|258539555|ref|YP_003174054.1| trigger factor [Lactobacillus rhamnosus Lc 705]
gi|229314443|gb|EEN80416.1| cell division trigger factor [Lactobacillus rhamnosus LMS2-1]
gi|257148273|emb|CAR87246.1| Trigger factor [Lactobacillus rhamnosus GG]
gi|257151231|emb|CAR90203.1| Trigger factor [Lactobacillus rhamnosus Lc 705]
gi|259649660|dbj|BAI41822.1| trigger factor [Lactobacillus rhamnosus GG]
Length = 446
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 78/459 (16%), Positives = 183/459 (39%), Gaps = 25/459 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EL I ++ + ++ + +R + GFR GKV + K +YG
Sbjct: 1 MSAKWEKKGTNDGELTFEIDLPKIQEGLDQAFQRVRKNLTVPGFRKGKVSRTVFKRMYGD 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + ++ ++ + + + +P I + + ++ +
Sbjct: 61 AALYEDALNILLPDAYEAAVKESGIDPVDQPKIDVESM---------DEGKPWVIKANVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + ++V + EV + +++ ++ + + VK+ ++ D V +DY
Sbjct: 112 VKPEVKLGQYKGVEVPKQDVEVSDDDVNAELEKRREQQAELVVKDDKAAENGDTVVIDYV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + S KN +GS E LVG K+GD+ + FPED+ DLAGK
Sbjct: 172 GTIDGKEFDGGSSKNYSLELGSNSFIPGFEEQLVGHKSGDEVTVNVTFPEDYKATDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVV--NNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I EV + + + ++ + ++ +++ + + V+
Sbjct: 232 AAEFKTTIHEVKVKELPELDDDFAKDLDDDVDTLAELKDKIKKELTDQRKEAAKNAVQEA 291
Query: 297 ILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ + T +VP +++E E + + + M + +E+ + +
Sbjct: 292 AIKKATENATIEEVPNAMIEQEVHNQMDQYLGNMQRQGISPKMYYQLTGTTEEDLHKQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ RV T +VL I + +I+ TE+++ + + EK + +
Sbjct: 352 ADAETRVRTNLVLEAIVKAEDIQPTEDQVTEEVKNLASEYNMDEKAVRQALSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
L+ I + ID I + + + + D+ D +
Sbjct: 407 LKHDIGVKEAIDIITDNAK--EVEAAKDETADKADSDKK 443
>gi|19746817|ref|NP_607953.1| trigger factor [Streptococcus pyogenes MGAS8232]
gi|23822223|sp|Q8NZF6|TIG_STRP8 RecName: Full=Trigger factor; Short=TF
gi|19749054|gb|AAL98452.1| RopA [Streptococcus pyogenes MGAS8232]
Length = 427
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 169/441 (38%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTISQDKIKLALDKAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 61 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGKEWTLSAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V D EV ++++D ++ +N +K+ E+ GD V +D+
Sbjct: 112 TKPEVKLGDYKNLVVEVDASKEVSDEDVDAKIERERQNLAELIIKDGEAAQGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K GD+ E+ FPE + +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPESYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEF---LVRQKVKR 295
+ +I EV + ++++LA + + ++ + + +
Sbjct: 232 AAKFMTTIHEVKTKEVPELDDELAKDIDEDVDTLEDLKVKYRKELEAAQETAYDDAVEGA 291
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
I ++N D+PE ++ E N + + M + E+ Y
Sbjct: 292 AIELAVANAEIVDLPEEMIHEEVNRSVNEFMGNMQRQGISPEMYFQLTGTTQEDLHNQYS 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E T+ E++ + + ++
Sbjct: 352 AEADKRVKTNLVIEAIAKAEGFEATDSEIEQEINDLATEYNMPADQVRSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDIAMKKAVEVITSTASVK 427
>gi|306825819|ref|ZP_07459158.1| trigger factor [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304432180|gb|EFM35157.1| trigger factor [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 427
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKTLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEGAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVLVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLAELKEKYRKELTAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEIEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDIAIKKAVELITSTATVK 427
>gi|148381181|ref|YP_001255722.1| trigger factor [Clostridium botulinum A str. ATCC 3502]
gi|153933855|ref|YP_001385556.1| trigger factor [Clostridium botulinum A str. ATCC 19397]
gi|153936080|ref|YP_001388962.1| trigger factor [Clostridium botulinum A str. Hall]
gi|166229036|sp|A7FYI3|TIG_CLOB1 RecName: Full=Trigger factor; Short=TF
gi|166229037|sp|A5I6W2|TIG_CLOBH RecName: Full=Trigger factor; Short=TF
gi|148290665|emb|CAL84794.1| trigger factor [Clostridium botulinum A str. ATCC 3502]
gi|152929899|gb|ABS35399.1| trigger factor [Clostridium botulinum A str. ATCC 19397]
gi|152931994|gb|ABS37493.1| trigger factor [Clostridium botulinum A str. Hall]
Length = 430
Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats.
Identities = 82/437 (18%), Positives = 196/437 (44%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L++ + S + ++ + + + N+ GFR GK PL+ IK YG+
Sbjct: 1 MNVKVENIEKNVVKLEITVDSEKFNEAVKKSFKKNAKRFNVPGFRKGKAPLNIIKKYYGE 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+ ++ P+ + + + + P I + + I D
Sbjct: 61 GVLFEDAINFCCEDTYPKAIEENNIKPVDYPQIDVVQ---------IGEGKDFIYTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+P++++ + ++V + EV+++ ++ ++ + + N +E E E G+ +D+
Sbjct: 112 TVPEVKLGEYKGVEVKKVSYEVEDEAVENELKSMQEKNARVSLKEEGEIEKGNIAIIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E K+ + +GS + + LVGLK + KE+ FPE++ +DL GK
Sbjct: 172 GYVDGKAFEGGEAKDYEIEIGSGTFIGDFEDQLVGLKKDESKEVNVSFPEEYGREDLNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+IK++ ++++ A F++ ++ ++K+ + + + +
Sbjct: 232 PATFEVTIKDIKVKELPALDDEFAKEVSEFDTLEELKSDIKDRMKKELSEKAKAEYEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ + ++P+ ++E E +++ + + + +S +E+ +Y
Sbjct: 292 VEAVGANAEIEIPKVMIEKEIENMVRDLEMRLKYQGLDLKSYYEFTNSSEEKVKEYMRET 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV T +++ I + +I+ TEEE++ + ++ + + A L
Sbjct: 352 AEKRVKTDLIMQEIAKVEDIKATEEELKEKAMEVAKQYGQKDVEKTAELIANA-QKAYLE 410
Query: 414 APIFEDKVIDHILKSVQ 430
I KV+D +++S +
Sbjct: 411 IDIVNGKVLDLLVESSK 427
>gi|206889421|ref|YP_002248103.1| trigger factor [Thermodesulfovibrio yellowstonii DSM 11347]
gi|226738695|sp|B5YI37|TIG_THEYD RecName: Full=Trigger factor; Short=TF
gi|206741359|gb|ACI20416.1| trigger factor [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 411
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 103/431 (23%), Positives = 201/431 (46%), Gaps = 27/431 (6%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
+ K+ L + IP++ + + +++I+ KA I GFRPGK P+S I+ +GK +
Sbjct: 5 IEEISATKKRLKIEIPADIVEGEIQKALKEIQKKAKIPGFRPGKAPISIIEKKFGKEAEA 64
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
+ +++++ E + + + + + P + I+ L L ++ P I
Sbjct: 65 DVLEKLVSESYQKAVKETKIKPLLPPMAE--------DAIDIKRNEPLSFELVVEVRPDI 116
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNV 184
E ++D+++V + EV E+EI+ + ++K +E E + D V +DYT +
Sbjct: 117 ENLNYDNIEVEEISTEVKEEEIEEVLQRLSKERGTYEPTEEPAMSEDLVVIDYTTDI--- 173
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
+ K+ + +G+ + ++ + G K + + FPED SI D AGKKV
Sbjct: 174 ---GKEAKDYIYKLGAGPFPEDFSKAIEGKKKDETFSVTIDFPED-SIADFAGKKVNFEI 229
Query: 245 SIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNK 304
+IKEV + + +L LGFE +++ Q ++ + +K K IL +
Sbjct: 230 TIKEVKRRQNIPL-EELHKELGFEDSDSLKKYIRQSLENAKKEQALEKQKFDILKKLLET 288
Query: 305 YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVL 364
Y F++PE LVE E I ++ +++ + + AKR V I++
Sbjct: 289 YDFELPEGLVEMEMKRITEEY-----------ESLGLDITQHMDKISERAKRNVKAYILI 337
Query: 365 GTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDH 424
IGEK + V+EEE++ + R+ + ++ ++ +L L+ +FE KV D
Sbjct: 338 DLIGEKEGVSVSEEELKQEIMNIARRYSITPQGVVQYYMSRDGSLEALQNSVFERKVFDI 397
Query: 425 ILKSVQIVDRK 435
+L+ + ++
Sbjct: 398 LLQKSNRIKKE 408
>gi|121587842|ref|ZP_01677600.1| trigger factor [Vibrio cholerae 2740-80]
gi|121547943|gb|EAX58026.1| trigger factor [Vibrio cholerae 2740-80]
Length = 247
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 120/256 (46%), Gaps = 9/256 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLENIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D V E +N +G+ + + +VG G + I+ FPED+ ++L GK
Sbjct: 172 IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAA 231
Query: 241 RLNFSIKEVFSPLPVV 256
+ + +V +
Sbjct: 232 KFAIKVNKVEARELPE 247
>gi|196018965|ref|XP_002118902.1| hypothetical protein TRIADDRAFT_62891 [Trichoplax adhaerens]
gi|190577804|gb|EDV18613.1| hypothetical protein TRIADDRAFT_62891 [Trichoplax adhaerens]
Length = 442
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 104/447 (23%), Positives = 213/447 (47%), Gaps = 16/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +E +E +V +P + E + + GFR GKVPLS ++ GK
Sbjct: 1 MTIKELQNEKFFKEFEVHVPFEEINSKVEESVAKAAETYKMPGFREGKVPLSIVRQKVGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ I E I E + +++ + RP + + + L +++ ++I
Sbjct: 61 EETGKQIQEKISESIKDLIDSKKIIPYSRPDVQVLS---------FDEDKGLSIKIGFEI 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
LP++ +D ++V + ++ EI + + K ++ ++++GDKV +++
Sbjct: 112 LPEVPEVKWDSIEVEKINIKISNDEIAKTKNNLLKEFRKYKKAESNYKTKVGDKVKINFH 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++ + + ++ ++G ++ L+G K D+K + FP+D+ +D+A K
Sbjct: 172 GQIEGKDFDGNKAEGMELVIGDNTFLADFESNLIGCKLNDEKSFDIVFPKDYPKEDIANK 231
Query: 239 KVRLNFSIKEVFSPLPVV-VNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K I +V + V++++ +LG ESE + L QK+ +R K+K+++
Sbjct: 232 KAVFKVKIVDVQELALIDKVSDEMLKKLGVESEEKLNELIKQKLNFDFMNSIRLKMKKEL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D + KY FD+P ++E ++ I +V DEE Y +AKRR
Sbjct: 292 FDEVDKKYDFDLPNKMIEQDFEVIWGEVEKNKQKQENT---KGKSDEELKSEYKQIAKRR 348
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V G+++ + +NNI +T++E++ + Q + P + K+L+ + K P L +++ PI
Sbjct: 349 VKLGLIMAEVTRQNNISITDDELRKIVELQANQNPQIKDKILEFY-KNPENLEKIKGPIL 407
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDN 444
E+K ++ IL V++ + ++T D
Sbjct: 408 EEKALNFILSKVKLKEIEMTTDDFVKK 434
>gi|154497944|ref|ZP_02036322.1| hypothetical protein BACCAP_01924 [Bacteroides capillosus ATCC
29799]
gi|150272934|gb|EDN00091.1| hypothetical protein BACCAP_01924 [Bacteroides capillosus ATCC
29799]
Length = 464
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 81/477 (16%), Positives = 192/477 (40%), Gaps = 23/477 (4%)
Query: 1 MQVI-EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M V + E + EL + + + ++ + R K + GFR G P I+ +YG
Sbjct: 1 MNVKSVEKQEKSQVELIIEVSGEEFEAAIDKVYKKQRGKIAVPGFRKGHAPRKIIEGMYG 60
Query: 60 KSI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + I+EI + + + + + P++ I + D +
Sbjct: 61 SGVFYEDAINEIYPQAYGQAVEQENLDVVAWPNVEILDAGKD----------GFSFKAVV 110
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
+ P++++ + L + V +++I+ ++ + + E E+++GD V +D+
Sbjct: 111 TVRPEVKLGEYKGLTAPKAEVNVTDEDIENELKPYIQRATSLVAVEREAQLGDTVVLDFE 170
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ V E + +GS + LVG+K G++K+I+ FPE++ DLAGK
Sbjct: 171 GFDNGVPFEGGKAEGYSLELGSGSFVPGFEDQLVGMKAGEEKDIDITFPENYH-ADLAGK 229
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + I EV V+++ A FE+ + + S+K+ + E ++ + +
Sbjct: 230 PVVFHVKINEVKEKKVPTVDDEFAKDVSEFETLADFKADLSKKVTERREKQAQENFENAL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR- 356
L+ + ++PE++V+ + ++ +++ ++ + + H AK
Sbjct: 290 LEQVVANMEVEIPEAMVDYRADKMMDDYARRITAQGMPFESYLQMMGMTKEAMHEQAKDG 349
Query: 357 ---RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
++ + L I NIE+++EE ++ ++ +++ EL
Sbjct: 350 ALHQIQVELALDAIAAAENIEISDEEKEAEYNSLAEQYSMPVEQVKAAVVDS-----ELV 404
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ K + + + ++ + + + + ++ K+ E E
Sbjct: 405 KELKTKKAAEVVYSTGKVGEAEKAETEEKPKKKAAPRKRTTKKAEVEEPKAEGEETK 461
>gi|320548012|ref|ZP_08042293.1| trigger factor [Streptococcus equinus ATCC 9812]
gi|320447358|gb|EFW88120.1| trigger factor [Streptococcus equinus ATCC 9812]
Length = 427
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 182/441 (41%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + I +++ + ++ ++ N GFR G +P + +G+
Sbjct: 1 MSVSFENKATNRGVITFTIGQDKIKPALDQAFNKVKKNLNAPGFRKGHMPRAVFNQQFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ +++ +P I I E + L
Sbjct: 61 EALYEDALNALLPAAYQAAVAELSLDVVAQPKIDIKSM---------EKGQEWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ + EV + E+D ++ N VKE +E+GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVEATKEVTDAEVDEKVERERNNLAELIVKEGAAELGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+VD V + +N +GS + LVG K G+ E+ FPE + +DLAGK
Sbjct: 172 GTVDGVEFDGGKGENFSLELGSGQFIPGFEDQLVGAKAGETVEVNVTFPEQYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DAKFVTTVHEVKAKEVPALDDELAKDIDEEVETLDELKAKYRKELESAKEIAFDDAVEGA 291
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
L+ ++N ++PE +V +E + + + M + +E+ + Y
Sbjct: 292 ALELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E ++EE++ + + +++ +
Sbjct: 352 ADADKRVKTNLVIEAIAKAEGFEASDEEIEKEINDLASEYNMEVEQVRNLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ + + ++
Sbjct: 407 LKHDIAMKKAVEVVTSTAKVK 427
>gi|260495118|ref|ZP_05815247.1| trigger factor [Fusobacterium sp. 3_1_33]
gi|260197561|gb|EEW95079.1| trigger factor [Fusobacterium sp. 3_1_33]
Length = 431
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 84/440 (19%), Positives = 180/440 (40%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E E+ + + + + ++ + + A + GFR G P + + Y
Sbjct: 1 MNYEVKKLEKSAVEVKLHLTAEEVKPIVDKVLAHVGEHAEVAGFRKGHAPKEVLMANYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++ ++ I P+I+ K + + I DL L D+
Sbjct: 61 HIENDVANDAINANFPQIVDKEKLQPVSY-----------VRLKEINLKDDLNLTFDIDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE---TESEIGDKVTVDY 177
PQ E+ ++ L+ + E+ + ++ ++ + +N+ E E ++++ D V + +
Sbjct: 110 YPQFELGNYKGLEAEKKSFEMTDDILNEELEIMVRNHAKLEEVEDAGYKAQLNDTVDLAF 169
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D V ++ +GS E LVG G + EI FP+++ +LAG
Sbjct: 170 EGFMDGVPFPGGKAESHLLKLGSKSFIDNFEEQLVGYTKGQEGEITVKFPDEYHAPELAG 229
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + I + +N++ A LG+ S ++ ++ + + + +
Sbjct: 230 KPAQFKVKINAIKKLKQPELNDEFAKELGYASLDELKAKTKEETIKRENDRIENEYVSAL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
LD + T DVP S+V+ E L+++ +++S K + + E
Sbjct: 290 LDKLMETTTIDVPVSMVQAEIQNRLKELEYQLSMQGFKMDDYLKMMGGNVETFAAQLAPA 349
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LA 410
A+++V ++L I + NN E T+EE+ + + + + + +K N +
Sbjct: 350 AEKKVKIDLILDRIAKDNNFEATDEELSQRMEEVAKMYGMDVPALEEELKKNKNLENFKS 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++ I K ID ++K+ +
Sbjct: 410 SVKYDIVMKKAIDEVVKNSK 429
>gi|23465520|ref|NP_696123.1| trigger factor [Bifidobacterium longum NCC2705]
gi|41018233|sp|Q8G5Q7|TIG_BIFLO RecName: Full=Trigger factor; Short=TF
gi|23326180|gb|AAN24759.1| trigger factor chaperone [Bifidobacterium longum NCC2705]
Length = 459
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 73/475 (15%), Positives = 179/475 (37%), Gaps = 26/475 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L V + L + ++I + N+ GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTVTVEPEELNPYLDAARKEIAKQVNVPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +++ + E+ + L ++ R +P + + LK + +
Sbjct: 61 AAVAGEAVNDAVPELYSKALEEKKIRPMAQPEFDVQD-----VPQSANDETKLKFTATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ D L++ EV ++++D+++ + + + + GD +D T
Sbjct: 116 RRPDIELPEIDGLEIAISKPEVKDEDVDKRLEALRQRFGTLVGVDRPAAKGDFANIDLTA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S++ V + +GS + E L GL G++ E + G+K
Sbjct: 176 EIDGETVD--SQEGVSYELGSNTMLDGLDEALDGLSAGEETTFEGTLEAG----EHEGQK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +N++ A F++ ++ + Q +E + + +
Sbjct: 230 ATVKVKVNSVKAEELPELNDEFASEASEFDTLDELKADIRKAAAQDAEGRQATEARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VP+ + N L+ + + + + +E ++ +
Sbjct: 290 AKLQEGLEIPVPKGVKANMVEEQLKGM----------TPDPEKATKEQKAQAEETVEKDL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + EK +++V++ ++ + L ++ + K L +
Sbjct: 340 RDQMVLDALAEKLDVQVSQSDVFNFLASIAQQYGMDPNNFIQAIIKN-GQLGSAVQEVGR 398
Query: 419 DKVIDHILKSVQIVD--RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + +++V+ V ++E + ++ +S E + +
Sbjct: 399 SKGLLAGMRAVKFTADGEVVDLSAFLGEAAEDEESESVEAASAAAAVADELSAKD 453
>gi|322387272|ref|ZP_08060882.1| trigger factor [Streptococcus infantis ATCC 700779]
gi|321141801|gb|EFX37296.1| trigger factor [Streptococcus infantis ATCC 700779]
Length = 427
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 78/441 (17%), Positives = 173/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKTLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + + +P I + E D +
Sbjct: 61 EALYQDAMNALLPDAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGEYKNLEVSVDVDKEVTDADVEERIERERNNLAELVIKEGAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ ++ +++ E V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLDELKEKYRKELAAAKEEAYTDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + TEEE+Q + Q + ++
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDATEEEIQKEIEQLAADYNMEVAQVQSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|86605921|ref|YP_474684.1| trigger factor [Synechococcus sp. JA-3-3Ab]
gi|119371020|sp|Q2JV31|TIG_SYNJA RecName: Full=Trigger factor; Short=TF
gi|86554463|gb|ABC99421.1| trigger factor [Synechococcus sp. JA-3-3Ab]
Length = 557
Score = 174 bits (440), Expect = 3e-41, Method: Composition-based stats.
Identities = 83/481 (17%), Positives = 188/481 (39%), Gaps = 23/481 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV ++ G + L +++ ++++ S+ + + + I GFR GK P + + G+
Sbjct: 1 MQVTQEKRPGSRVGLKIVVEADQVKRSYEKTLRQLERNIQIPGFRKGKAPRNLVIRQVGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ +D++I E + + L R + + D +
Sbjct: 61 ERVMASAVDDLINEAIQQALKDTQLHPISRFELDDK---VEQLLDRFNPEADFSFSGYVE 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P+ + + L VT V ++ID+ + ++ +++GD V +D+
Sbjct: 118 VYPEARVGQYKGLTVTATRVTVKPEQIDQLIDRWRDQRATLLPVEDRPAQLGDVVVIDFQ 177
Query: 179 VSV-DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ LE+ + ++ Q + + +VG++ KEI FP+D+ K+LAG
Sbjct: 178 ARDAEGNPLEEIAAQDFQLELKEENFIPGFVAGVVGMQLDQTKEITATFPDDYFRKELAG 237
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K V +KE+ + +++ F++ + +R ++++Q + + ++
Sbjct: 238 KTVTFTVCLKEIKTKELPELDDAFVQEISEFQTVAELREHLQKRLEQDALRQSEENLETA 297
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSS---------ANQKSQNVDSIDEEDL 347
IL+ I D+PE+LVE E +L + + SQ + +
Sbjct: 298 ILNAILETTEVDLPETLVEQETTQLLARSLQSLQQQQGVTPGEIRKFLSQLPPETLNQLM 357
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A R+ + L I + I V E++ + + + + +K+
Sbjct: 358 ERHRPEAINRLRRTLALSAIVRQEQIAVGPNELEVEVEEVMAAYAQQGQKL-----DRER 412
Query: 408 ALAELRAPIFEDKVIDHILKSVQI--VDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ + +KV+ + + VD + + S S E ++S
Sbjct: 413 VRQAVHEDLLANKVMAWLKSQTTVNWVDSEGNPTEPPTLSPRSEGEDRQERSESARAGVP 472
Query: 466 E 466
E
Sbjct: 473 E 473
>gi|293364824|ref|ZP_06611541.1| trigger factor [Streptococcus oralis ATCC 35037]
gi|307703073|ref|ZP_07640020.1| trigger factor [Streptococcus oralis ATCC 35037]
gi|291316274|gb|EFE56710.1| trigger factor [Streptococcus oralis ATCC 35037]
gi|307623466|gb|EFO02456.1| trigger factor [Streptococcus oralis ATCC 35037]
Length = 427
Score = 174 bits (439), Expect = 3e-41, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKTLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 EALYQDAMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEGAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLDELKEKYRKELTAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEIEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|322386793|ref|ZP_08060417.1| trigger factor [Streptococcus cristatus ATCC 51100]
gi|321269075|gb|EFX52011.1| trigger factor [Streptococcus cristatus ATCC 51100]
Length = 427
Score = 174 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 171/441 (38%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + + ++ + GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTIGQDQIKPALDRAFNAVKKNIAVPGFRKGHIPRPVFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVLNALLPAAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITADVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+V+ + EV + E+D ++ N +K+ + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVSVEVSKEVTDAEVDERIERERNNLAELVLKDGAAAEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG G+ ++ FPED+ DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEDQLVGHSAGETVDVVVTFPEDYQAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ + ++ +++ + E V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLAELKEKYRKELAEAKEAAYNDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+PE ++ E + + + M Q + E+ + Y
Sbjct: 292 AIDLAVENAEIVDLPEEMIHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A R T +V+ + + E + EE+++ + + ++ +
Sbjct: 352 ADAAARTKTNLVVEAVAKAEGFEASAEEVEAEITSLATDYNMEADRVRQLLSE-----EM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAVKKAVEVITSTAKVK 427
>gi|322374882|ref|ZP_08049396.1| trigger factor [Streptococcus sp. C300]
gi|321280382|gb|EFX57421.1| trigger factor [Streptococcus sp. C300]
Length = 427
Score = 174 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKTLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 EALYQDAMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEGAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLDELKEKYRKELTAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEIEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|312132961|ref|YP_004000300.1| tig [Bifidobacterium longum subsp. longum BBMN68]
gi|311773943|gb|ADQ03431.1| Tig [Bifidobacterium longum subsp. longum BBMN68]
Length = 459
Score = 174 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 73/475 (15%), Positives = 179/475 (37%), Gaps = 26/475 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L V + L + ++I + N+ GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTVTVEPEELNPYLDAARKEIAKQVNVPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +++ + E+ + L ++ R +P + + LK + +
Sbjct: 61 AAVAGEAVNDAVPELYSKALDEKKIRPMAQPEFDVQD-----VPQSANDETKLKFTATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ D L++ EV ++++D+++ + + + + GD +D T
Sbjct: 116 RRPDIELPEIDGLEIAISKPEVKDEDVDKRLETLRQRFGTLVGVDRPAAKGDFANIDLTA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S++ V + +GS + E L GL G++ E + G+K
Sbjct: 176 EIDGETVD--SQEGVSYELGSNTMLDGLDEALDGLSAGEETTFEGMLEAG----EHEGQK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +N++ A F++ ++ + Q +E + + +
Sbjct: 230 ATVKVKVNSVKAEELPELNDEFASEASEFDTLDELKADIRKAAAQDAEGRQATEARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VP+ + N L+ + + + + +E ++ +
Sbjct: 290 AKLQEGLEIPVPKGVKANMVEEQLKGM----------TPDPEKATKEQKAQAEETVEKDL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + EK +++V++ ++ + L ++ + K L +
Sbjct: 340 RDQMVLDALAEKLDVQVSQSDVFNFLASIAQQYGMDPNNFIQAIIKN-GQLGSAVQEVGR 398
Query: 419 DKVIDHILKSVQIVD--RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + +++V+ V ++E + ++ +S E + +
Sbjct: 399 SKGLLAGMRAVKFTADGEVVDLSAFLGEAAEDEESESVEAASAAAAVADELSAKD 453
>gi|269976480|ref|ZP_06183465.1| trigger factor [Mobiluncus mulieris 28-1]
gi|269935281|gb|EEZ91830.1| trigger factor [Mobiluncus mulieris 28-1]
Length = 443
Score = 174 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 72/470 (15%), Positives = 187/470 (39%), Gaps = 32/470 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K ++ V +P ++ ++ + NI GFR G+ P ++S G+
Sbjct: 1 MKSTVENLNPTKVKITVEVPYEEFKPEMDKVFKEYSKQMNIPGFRRGRAPARVVESYVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ++ + E +++ + +P+I + SD + DLK + +
Sbjct: 61 GAVIEDAVNHAMPEYYGQVVEENRLAPLGKPAIEV----SDTPNIEGNAGGDLKFSVEVE 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P++++ F +++ + EV ++++ ++ + + + + E + D VT+D
Sbjct: 117 IRPEVKLPEFSGIELEVEPVEVKAEDVEEELTALRRRFASLKSVERAVKDEDFVTIDVVT 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ +++ ++ + + GS + + L GLK G+ KE + + A
Sbjct: 177 KQGDEEIDNMTQVSYRV--GSGGILDGLDDALKGLKAGEVKEFKTQLKSGPHGGEEA--- 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
N + V + ++++ A+ ++ R + + + + +++
Sbjct: 232 -LANVVLGSVKEQILPELDDEFAMMVSDHDTIDDFRKEMEETVTKQKRAEQALDARDKLV 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ F +PE +VE+ +++ +E+ Q L ++ +
Sbjct: 291 QKLVGDLEFPLPEGVVEDTLATQVRE----------------EDSDEEKQRVRELVEKDL 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T I+L T+ EK + VT+EE+ + Q + +L ++ N + I
Sbjct: 335 KTQIILDTLAEKRQMNVTQEELLQFILQTAQTYGMDPSALLSSAEQN-NRIPAFIQEIAR 393
Query: 419 DKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+K I L V + D ++ + + + + ++ ++
Sbjct: 394 NKAIAAALSEVSVKDTKGQELDLSEFIGLDEDDDADAADESGAESAETEA 443
>gi|153854554|ref|ZP_01995824.1| hypothetical protein DORLON_01819 [Dorea longicatena DSM 13814]
gi|149752863|gb|EDM62794.1| hypothetical protein DORLON_01819 [Dorea longicatena DSM 13814]
Length = 428
Score = 174 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 83/436 (19%), Positives = 184/436 (42%), Gaps = 18/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + +P+N L + ++K + GFR GKVP I+ +YG
Sbjct: 1 MSLQVEKLENNMAKLTIEVPANDLEKALQSAYMKQKNKIAMPGFRKGKVPRQMIEKMYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + + +I + E + D RP I I + IE
Sbjct: 61 EIFYDDAANALIPKAYSEAYDECDLEIVSRPEINIVQ---------IEKGKSFIFTADVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
P++++ + L+V + V +KE+D ++ E A+ N V + GD+V +D+
Sbjct: 112 TKPEVKLGEYKGLEVDKVSTRVTQKEVDAKIQEEAEKNAREVVVTDRPVADGDEVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E +N +GS E LVG + + E++ FPED+ ++L GK
Sbjct: 172 GFVDGEAFEGGKGENYPLTIGSGSFIPGFEEQLVGAEAEKEVEVKVTFPEDYHAEELKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ E+ + ++++ A F++ + KIK+ ++ + Q
Sbjct: 232 EAVFKCTVHEIKAKELPEIDDEFAAEVSEFDTLEEYKADVKAKIKEQKAADGKRNQEDQA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
++ +++P+ +++ + +++ + S + E+ ++
Sbjct: 292 VEQAVKNAEYEIPQPMIDTQTTQMVEDFAQRIQSQGITLEQYFQFTGLTAEKMMEDMKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I + NIE+T+E++ L + + +K+ + + +++
Sbjct: 352 AIKRIETRLVLEAIAKAENIEITDEKVDEELAKMAESYNMEVEKLKEFMGENE--KKQMK 409
Query: 414 APIFEDKVIDHILKSV 429
+ + + ++++
Sbjct: 410 EDLAVQEAVTFLVENA 425
>gi|15672533|ref|NP_266707.1| trigger factor [Lactococcus lactis subsp. lactis Il1403]
gi|281491017|ref|YP_003352997.1| trigger factor [Lactococcus lactis subsp. lactis KF147]
gi|13878816|sp|Q9CI15|TIG_LACLA RecName: Full=Trigger factor; Short=TF
gi|12723436|gb|AAK04649.1|AE006288_12 trigger factor [Lactococcus lactis subsp. lactis Il1403]
gi|281374775|gb|ADA64295.1| Trigger factor, ppiase [Lactococcus lactis subsp. lactis KF147]
gi|326406052|gb|ADZ63123.1| trigger factor [Lactococcus lactis subsp. lactis CV56]
Length = 427
Score = 174 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 85/441 (19%), Positives = 181/441 (41%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + K L I + ++ +++ ++ GFR GK+ +YG+
Sbjct: 1 MTVSFEKTSDTKGTLSFSIDQETIKTGLDKAFNKVKANISVPGFRKGKISRQMFNKMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++ ++ + + +P I + +E D +L
Sbjct: 61 EALFEEALNAVLPTAYDAAVKEAGIEPVAQPKIDV---------AKMEKGSDWELTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
+ P + + + DL V + EV ++E++ ++ N VKET +E GD V +D+
Sbjct: 112 VKPTVSLGDYKDLTVEVEATKEVSDEEVETRLTNSQNNLAELVVKETAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E N +GS E LVG K G+ E++ FPE++ +DLAGK
Sbjct: 172 GSVDGVEFEGGKGSNHSLELGSGQFIPGFEEQLVGTKAGETVEVKVTFPENYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHS-EFLVRQKVKR 295
+ ++ EV + ++++LA E+ ++ +++++ E
Sbjct: 232 EALFVTTVNEVKAKELPELDDELAKDIDEEVETLDELKAKFRKELEESKAEAYNDAVETA 291
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
I ++N ++PE ++ E + + + M + +++ + Y
Sbjct: 292 AIEAAVANAEIKEIPEEMIHEEVHRAMNEFLGGMQQQGISPEMYFQITGTSEDDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I N ++EE+++ + G++ +++ +
Sbjct: 352 ADADKRVRTNLVIEAIAAAENFTTSDEEVKAEIEDLAGQYNMPVEQVEKLLP-----VDM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAMKKAVEVIATTAKVK 427
>gi|311064599|ref|YP_003971324.1| trigger factor, ppiase [Bifidobacterium bifidum PRL2010]
gi|310866918|gb|ADP36287.1| Tig Trigger factor, ppiase [Bifidobacterium bifidum PRL2010]
Length = 461
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 60/416 (14%), Positives = 155/416 (37%), Gaps = 23/416 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L + + + ++I + NI GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTITVDPEEFNPYLDAARKEIAKQVNIPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + E + L ++ +P I + E + LK + +
Sbjct: 61 AAVAGEAVNNGVPEFYSKALEEKQIHPMSQPEIDVQE-----VPESAKDETKLKFTATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ D L++ +V +++++ ++ + + + + GD +D
Sbjct: 116 RRPDIELPELDGLEIDVPKAQVTDEDVNNRLESLRQRFGTLVGVDRPAAKGDFANIDLDA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S++ V + +GS + E L GL G++ + G++
Sbjct: 176 QIDGESVD--SQEGVSYELGSGTMLDGLDEALEGLSAGEETSFN----SKLQGGEHEGEE 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +++D A F++ ++ + ++ +E + + +
Sbjct: 230 ALVKVKVNSVKTEELPELDDDFAQDASEFDTLDELKADVRKAAERDAEGRQATEARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VP+ + + L+ V + + +E + +
Sbjct: 290 AKLEEGAEIPVPKGVKADMLEQQLKNV----------TADPSKATDEQKADAEKQVVKEL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+VL + EK +++V++ ++ + L ++ + K + ++
Sbjct: 340 TDQMVLDALAEKLDVKVSQADVTNFLASIAQQYGMDPSAFIQAIVKNGQLGSAVQE 395
>gi|199598203|ref|ZP_03211625.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Lactobacillus rhamnosus HN001]
gi|199590964|gb|EDY99048.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Lactobacillus rhamnosus HN001]
Length = 446
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 79/459 (17%), Positives = 184/459 (40%), Gaps = 25/459 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EL I ++ + ++ + +R + GFR GKV + K +YG
Sbjct: 1 MSAKWEKKGTNDGELTFEIDLPKIQEGLDQAFQRVRKNLTVPGFRKGKVSRTVFKRMYGD 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + ++ ++ + + + +P I + + D ++ +
Sbjct: 61 AALYEDALNILLPDAYEAAVKESGIDPVDQPKIDVESMDED---------KPWVIKANVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + ++V + EV + +++ ++ + + VK+ ++ D V +DY
Sbjct: 112 VKPEVKLGQYKGVEVPKQDVEVSDDDVNAELEKRREQQAELVVKDDKAAENGDTVVIDYV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++D + S KN +GS E LVG K+GD+ + FPED+ DLAGK
Sbjct: 172 GTIDGKEFDGGSSKNYSLELGSNSFIPGFEEQLVGHKSGDEVTVNVTFPEDYKATDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVV--NNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I EV + + + ++ + ++ +++ + + V+
Sbjct: 232 AAEFKTTIHEVKVKELPELDDDFAKDLDDDVDTLAELKDKIKKELTDQRKEAAKNAVQEA 291
Query: 297 ILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ + T +VP +++E E + + + M + +E+ + +
Sbjct: 292 AIKKATENATIEEVPNAMIEQEVHNQMDQYLGNMQRQGISPKMYYQLTGTTEEDLHKQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ RV T +VL I + +I+ TE+++ + + EK + +
Sbjct: 352 ADAETRVRTNLVLEAIVKAEDIQPTEDQVTEEVKNLASEYNMDEKAVRQALSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
L+ I + ID I + + + + D+ D +
Sbjct: 407 LKHDIGVKEAIDIITDNAK--EVEAAKDETADKADSDKK 443
>gi|306832740|ref|ZP_07465876.1| trigger factor [Streptococcus bovis ATCC 700338]
gi|304425089|gb|EFM28219.1| trigger factor [Streptococcus bovis ATCC 700338]
Length = 427
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 82/441 (18%), Positives = 182/441 (41%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + I +++ + ++ ++ N GFR G +P + +G+
Sbjct: 1 MSVSFENKATNRGVITFTIDQDKIQPALDQAFNKVKKNLNAPGFRKGHMPRAVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ I+ +++ +P I I E + L
Sbjct: 61 EALYEDALNAILPAAYEAAVAELSLDVVAQPKIDIQSM---------EKGQEWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + DL+V+ + EV + E+D ++ N +KE +E+GD V +D+
Sbjct: 112 TKPEVKLGVYKDLEVSVEATKEVTDAEVDEKVERERNNLAELIIKEDAAELGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAKAGETVDVNVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DAKFVTTVHEVKAKEVPALDDELAKDIDEEVETLDELKAKYRKELEAAKEIAYDDAVEGA 291
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
L+ ++N ++PE +V +E + + + M + +E+ + Y
Sbjct: 292 ALELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E ++EE++ + + +++ +
Sbjct: 352 ADADKRVKTNLVIEAIAKAEGFEASDEEIEKEINDLASEYNMEVEQVRNLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K +D + + ++
Sbjct: 407 LKHDIAMKKAVDVVTSTAKVK 427
>gi|237743259|ref|ZP_04573740.1| trigger factor [Fusobacterium sp. 7_1]
gi|229433038|gb|EEO43250.1| trigger factor [Fusobacterium sp. 7_1]
Length = 431
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 85/440 (19%), Positives = 180/440 (40%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E E+ + + + + ++ + + A + GFR G P + + Y
Sbjct: 1 MNYEVKKLEKSAVEVKLHLTAEEVKPIVDKVLAHVGEHAEVAGFRKGHAPKEVLMANYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++ ++ I P+I+ K + + I DL L D+
Sbjct: 61 HIENDVANDAINANFPQIVDKEKLQPVSY-----------VRLKEINLKDDLNLTFDIDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE---TESEIGDKVTVDY 177
PQ E+ ++ L+ + E+ + ++ ++ + +N+ E E ++++ D V + +
Sbjct: 110 YPQFELGNYKGLEAEKKSFEMTDDILNEELEIMVRNHAKLEEVEDAGYKAQLNDTVDLAF 169
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D V ++ +GS E LVG G + EI FP+++ +LAG
Sbjct: 170 EGFMDGVPFPGGKAESHLLKLGSKSFIDNFEEQLVGYTKGQEGEITVKFPDEYHAPELAG 229
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + I + +N++ A LG+ S ++ ++ + + + +
Sbjct: 230 KPAQFKVKINAIKKLKQPELNDEFAKELGYASLDELKAKTKEETIKRENDRIENEYVSAL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
LD + T DVP S+V+ E L+++ +++S K + + E
Sbjct: 290 LDKLMETTTIDVPVSMVQAEIQNRLKELEYQLSMQGFKMDDYLKMMGGNVETFAAQLAPA 349
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LA 410
A+++V ++L I + NN E T+EE+ + + + + + +K N A
Sbjct: 350 AEKKVKVDLILDRIAKDNNFEATDEELSQRMEEVAKMYGMDVPALEEELKKNKNLENFKA 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++ I K ID ++K+ +
Sbjct: 410 FVKYDIVMKKAIDEVVKNSK 429
>gi|94987235|ref|YP_595168.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Lawsonia intracellularis PHE/MN1-00]
gi|118574073|sp|Q1MQ80|TIG_LAWIP RecName: Full=Trigger factor; Short=TF
gi|94731484|emb|CAJ54847.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Lawsonia intracellularis PHE/MN1-00]
Length = 430
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 86/439 (19%), Positives = 189/439 (43%), Gaps = 14/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + K++L + + + + + + I + ++ GFR GKVP S + + +
Sbjct: 1 MEFVLESISPTKKKLTISLTPDEVNTALDSVIAQYKKDLSLPGFRKGKVPNSVVFKKFSE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++ +E +K + EI K + L++++
Sbjct: 61 EITNKATEETLKIYIKEIFQKEHIKPL---------CNLLTEDTDFIRNESFSSTLTFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LP+I +++ L+V QD+ +V ++E+ + I ++ + GD V VDY
Sbjct: 112 LPEITFPNYEGLEVHQDVVKVTDEEVAELLKNIQLAMAELVDVKEDRSPQNGDVVDVDYK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + D S ++ +G + +++ K G++K FP D++ K LAGK
Sbjct: 172 GFENGSPVTDVSGEHFVLTLGQRQALEDFEQLVKTAKVGEEKVGIVNFPRDYAHKGLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + + + + ++ D A + G+E +R +++ + + ++++
Sbjct: 232 SIDFHIKLNSIKTSILPELDADFAKKAGYEDIDKLREAAKVQLEIKKKQNAKSNAMKKLI 291
Query: 299 DYISNKYTFDVPESLVENEYNGIL--QKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ + + TFDVPE+++E IL +R + + Q + +EE + A
Sbjct: 292 NGLLEQVTFDVPETMLETRIERILGDHNIRSQQTVQVQTGEERSESEEELYNNAKVEALA 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ I L + EK + V E+E++ ALY R K D + + + EL+ +
Sbjct: 352 VLRPQIFLMALAEKEKLVVMEQEVERALYNMAIRARQDYNKFRDAYYRS-GLVYELQDHL 410
Query: 417 FEDKVIDHILKSVQIVDRK 435
+K ++ I +V+ +
Sbjct: 411 LAEKAMELIYNKANVVEVE 429
>gi|293557139|ref|ZP_06675693.1| trigger factor [Enterococcus faecium E1039]
gi|294614150|ref|ZP_06694071.1| trigger factor [Enterococcus faecium E1636]
gi|291593000|gb|EFF24588.1| trigger factor [Enterococcus faecium E1636]
gi|291600708|gb|EFF31006.1| trigger factor [Enterococcus faecium E1039]
Length = 429
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 72/439 (16%), Positives = 164/439 (37%), Gaps = 23/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L I + + ++ N+ GFR GKV +YG+
Sbjct: 1 MTATFEKKGTNDGVLKFTIAQDEIQKGLTTAFNKVKKSLNVPGFRKGKVSRQVFNRMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P I + E D +
Sbjct: 61 EALYEDALNAVLPEAYEAAVKEAGIDPVSQPKIDVESM---------EKGQDWVITAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + DL V + EV + ++D ++ + +KE + D V +D+
Sbjct: 112 VKPEVKLGQYKDLVVEKQDREVTDADVDARIKREQEAQAELVIKEDAAAENGDTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + +N +GS + LVG K+G+ ++ FPED+ ++LAGK
Sbjct: 172 GFVDGEAFDGGKGENYSLELGSGSFIPGFEDQLVGHKSGESLDVNVTFPEDYQAENLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +I EV + ++++ A + E + ++ +++ + E
Sbjct: 232 EAVFKVTIHEVKAKEVPELDDEFAKDVDDEVSTLDELKEKYRKELVETKEKAADDAKDEA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++P +V +E + + + M + +E+ + +
Sbjct: 292 AIRMAVENAEIVELPHVMVHDEVHRSMDEFLNNMQRQGISPEMYYQLTGSTEEDLHKQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ I N++ TEEE+ + + + + +++ +
Sbjct: 352 GEAEMRTRTNLVIEAIAAAENLQATEEEINAEIQELSETYNMPVEQIKRVLTED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQ 430
L + K I+ I +
Sbjct: 407 LEHDVTMKKAIELITGTAT 425
>gi|227495364|ref|ZP_03925680.1| FKBP family peptidyl-prolyl cis-trans isomerase (trigger factor)
[Actinomyces coleocanis DSM 15436]
gi|226831118|gb|EEH63501.1| FKBP family peptidyl-prolyl cis-trans isomerase (trigger factor)
[Actinomyces coleocanis DSM 15436]
Length = 431
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 71/451 (15%), Positives = 180/451 (39%), Gaps = 32/451 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E K ++ V +P L + +++ ++ NI GFR GKVP I +G+
Sbjct: 1 MKNTVENLESTKVKITVEVPVEELKKDIDAAYKELSNQVNIPGFRRGKVPARIIDQRFGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + ++ ++ E +++ D R +P + + E I + + L + D
Sbjct: 61 VVVLEQVVNNVLPRFYSEAVAENDLRVMGQPEVDVTE----IPATEGPLSGQLVFTATVD 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
++P E+ + + L++T D EV + ++D+++ E+ + + + +++ GD T+D
Sbjct: 117 VVPAFELPATEGLELTVDALEVTDADVDKELEELQTRFASLKPIKRKAKKGDFATLDMVA 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD ++ S ++ + +GS + + L G+K ++ + + G++
Sbjct: 177 VVDGKEVDSVS--DISYEIGSKSMLDGMDKALTGMKADEETTFTTVL----AGGEYEGQE 230
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + + ++D A F++ +R + +Q + + + ++
Sbjct: 231 AEVTLKVTAMKARELPKADDDFAQMVSEFDTIEELREDLKTQAQQTKKNEQALQARDLLV 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + +VP +VE E + + + + + +
Sbjct: 291 EKLVELAGVEVPAGVVEAEVANRV----------------GEDAKKAEKTKAAADITKEI 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++ + + VT++E+ + Q + ++L + + + A +
Sbjct: 335 AAHVISEKLAADKEVRVTQQELFEFIMQTAQMYNIDPMQLL----QNQEQIQAMAADLTR 390
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
K I L V + D L + + + S
Sbjct: 391 TKAIALTLAEVTVKDTNGEIVDLSEYTKDPS 421
>gi|306828931|ref|ZP_07462123.1| trigger factor [Streptococcus mitis ATCC 6249]
gi|304429109|gb|EFM32197.1| trigger factor [Streptococcus mitis ATCC 6249]
Length = 427
Score = 173 bits (438), Expect = 6e-41, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKSLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEGAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLDELKEKYRKELTAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEIEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|171777511|ref|ZP_02919233.1| hypothetical protein STRINF_00062 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283221|gb|EDT48645.1| hypothetical protein STRINF_00062 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 427
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 182/441 (41%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + I +++ + ++ ++ N GFR G +P + +G+
Sbjct: 1 MSVSFENKATNRGVITFTIGQDKIKPALDQAFNKVKKNLNAPGFRKGHMPRAVFNQQFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ +++ +P I I E + L
Sbjct: 61 EALYEDALNALLPAAYQAAVAELSLDVVAQPKIDIQSM---------EKGQEWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ + EV + E+D ++ N VKE +E+GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVEASKEVTDAEVDEKVERERNNLAELIVKEGAAELGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + +N +GS + LVG K G+ E+ FPE + +DLAGK
Sbjct: 172 GSVDGVEFDGGKGENFSLELGSGQFIPGFEDQLVGAKAGETVEVNVTFPEQYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DAKFVTTVHEVKAKEVPALDDELAKDIDEEVETLDELKAKYRKELESAKEIAFDDAVEGA 291
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
L+ ++N ++PE +V +E + + + M + +E+ + Y
Sbjct: 292 ALELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E ++EE++ + + +++ +
Sbjct: 352 ADADKRVKTNLVIEAIAKAEGFEASDEEIEKEINDLASEYNMEVEQVRNLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ + + ++
Sbjct: 407 LKHDIAMKKAVEVVTSTAKVK 427
>gi|189219052|ref|YP_001939693.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Methylacidiphilum infernorum V4]
gi|189185910|gb|ACD83095.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Methylacidiphilum infernorum V4]
Length = 443
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 90/438 (20%), Positives = 181/438 (41%), Gaps = 20/438 (4%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
+ EG ++ L + +P + + D +KA I GFR GK P ++ +Y K I
Sbjct: 15 VENIEGCRKRLKIEMPFEETLPEREKIVRDFVNKAKIAGFRVGKAPREIVEKMYKKEIEK 74
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
ET ++K + + + ++ + L + D PQ
Sbjct: 75 ETERHLLKHVYERAIKENALEIV---------NLIEVEALHYSHGEPFSLSVVVDTKPQF 125
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYTVSVDN 183
+ + + V + + +EI++ + I ++ +F + + GD V V Y+ S++N
Sbjct: 126 SLPPYTAIPVPKGDVAIKPEEINQTIESILESKASFVDVKGRTVAYGDFVVVSYSGSLEN 185
Query: 184 VILED--------QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
L + +N ++ + L+G++ G K FP++ ++ L
Sbjct: 186 KPLLELVPTAGVMAKGENQWILIKEGVFLPGFIDQLIGMEAGQSKTFTVVFPQNWFLEPL 245
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
GK+V S++ + S + V+ ++L + + + +K++ E R K
Sbjct: 246 RGKEVSYTVSLQAIKSKILPVITDELTKEISGLDKQQFMEAVEKSLKENKEAHARNIQKL 305
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
+I+DY+ F +PES VE E I +K E ++ EE + + A+
Sbjct: 306 KIIDYLLASVDFPLPESEVEKEAEWIFRKAVVESQEKGTPIAILEEKKEEIYEKSLIQAR 365
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
++ +L I +K NI VT+E++ + + R +K+L + L
Sbjct: 366 KKTKLHFILEEIAKKENISVTKEDLSVEINKMALRERMEPRKLLKKLSS--EDINNLMNQ 423
Query: 416 IFEDKVIDHILKSVQIVD 433
+F K++D +L+ +I D
Sbjct: 424 VFFQKILDFLLEKAKIED 441
>gi|289168571|ref|YP_003446840.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Streptococcus mitis B6]
gi|288908138|emb|CBJ22979.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Streptococcus mitis B6]
Length = 427
Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 173/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ ++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLAELKEKYRNELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++
Sbjct: 352 GEAESRTKTNLVIEAVAKAEGFDASEEEIQKEIEQLAADYNMEVAQVQSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|238917378|ref|YP_002930895.1| trigger factor [Eubacterium eligens ATCC 27750]
gi|238872738|gb|ACR72448.1| trigger factor [Eubacterium eligens ATCC 27750]
Length = 429
Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats.
Identities = 79/437 (18%), Positives = 176/437 (40%), Gaps = 19/437 (4%)
Query: 1 MQVIEKFSE-GLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M + E +L + + N +SK ++ GFR GK P I+ +YG
Sbjct: 1 MSFTVENLEEKNMVKLVIESTAEEFEAGLNTAYNKNKSKISLPGFRKGKAPRKMIEKMYG 60
Query: 60 KSI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + + II + + + +P I + + +E
Sbjct: 61 AEVFYEDAANSIIPDAYAKAADECGLELVSQPKINVTQ---------LEAGKPFIFEAVV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDY 177
P++E+ + ++VT+ E + +++ ++ + N + + GD +D+
Sbjct: 112 ATKPEVELGQYKGVEVTKADTEATDADVEEELKRVQDQNSRTVAVTDRAVKDGDNTVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD V E + +GS + ++G+ GD+KEI FPE++ + DL G
Sbjct: 172 EGFVDGVAFEGGKGTDYPLTIGSHSFIDTFEDQIIGMNIGDEKEINVTFPEEYHVDDLKG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K S+KE+ +N++ A F++ + + +KI + K + +
Sbjct: 232 KPAMFKVSVKEIKEKQLPELNDEFAQDVSDFDTIAEYKDDLKKKIADRKSREAKAKQEDE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+ I D+P+++V+ + N +++ + Q Q ++ ++
Sbjct: 292 AIAKIIEDSKMDIPDAMVDTQVNRMVEDFAQRLQQQGLSVEQYFQYTGMTADKIMEEMKP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A +R+ + +VL + + NIE ++E+ ++ L + + ++ + Y ++
Sbjct: 352 EAVKRIQSRLVLEAVVKAENIETSDEDFEAELKKMAEAYKMELDQIKEFMGDYE--KKQI 409
Query: 413 RAPIFEDKVIDHILKSV 429
+ + K +D I+ SV
Sbjct: 410 KEDLAIQKAVDVIVGSV 426
>gi|227551679|ref|ZP_03981728.1| trigger factor [Enterococcus faecium TX1330]
gi|257878470|ref|ZP_05658123.1| trigger factor [Enterococcus faecium 1,230,933]
gi|257882892|ref|ZP_05662545.1| trigger factor [Enterococcus faecium 1,231,502]
gi|257884401|ref|ZP_05664054.1| trigger factor [Enterococcus faecium 1,231,501]
gi|257887185|ref|ZP_05666838.1| trigger factor [Enterococcus faecium 1,141,733]
gi|257889330|ref|ZP_05668983.1| trigger factor [Enterococcus faecium 1,231,410]
gi|257894343|ref|ZP_05673996.1| trigger factor [Enterococcus faecium 1,231,408]
gi|257895721|ref|ZP_05675374.1| trigger factor [Enterococcus faecium Com12]
gi|257898292|ref|ZP_05677945.1| trigger factor [Enterococcus faecium Com15]
gi|258616005|ref|ZP_05713775.1| trigger factor [Enterococcus faecium DO]
gi|260560059|ref|ZP_05832237.1| trigger factor [Enterococcus faecium C68]
gi|261207452|ref|ZP_05922138.1| trigger factor [Enterococcus faecium TC 6]
gi|289565863|ref|ZP_06446304.1| trigger factor tig [Enterococcus faecium D344SRF]
gi|293377670|ref|ZP_06623859.1| trigger factor [Enterococcus faecium PC4.1]
gi|293559814|ref|ZP_06676332.1| trigger factor [Enterococcus faecium E1162]
gi|293568083|ref|ZP_06679420.1| trigger factor [Enterococcus faecium E1071]
gi|293571863|ref|ZP_06682879.1| trigger factor [Enterococcus faecium E980]
gi|294617408|ref|ZP_06697042.1| trigger factor [Enterococcus faecium E1679]
gi|294623407|ref|ZP_06702263.1| trigger factor [Enterococcus faecium U0317]
gi|314939701|ref|ZP_07846925.1| trigger factor [Enterococcus faecium TX0133a04]
gi|314942229|ref|ZP_07849081.1| trigger factor [Enterococcus faecium TX0133C]
gi|314948862|ref|ZP_07852232.1| trigger factor [Enterococcus faecium TX0082]
gi|314950804|ref|ZP_07853876.1| trigger factor [Enterococcus faecium TX0133A]
gi|314992215|ref|ZP_07857655.1| trigger factor [Enterococcus faecium TX0133B]
gi|314995226|ref|ZP_07860339.1| trigger factor [Enterococcus faecium TX0133a01]
gi|227179242|gb|EEI60214.1| trigger factor [Enterococcus faecium TX1330]
gi|257812698|gb|EEV41456.1| trigger factor [Enterococcus faecium 1,230,933]
gi|257818550|gb|EEV45878.1| trigger factor [Enterococcus faecium 1,231,502]
gi|257820239|gb|EEV47387.1| trigger factor [Enterococcus faecium 1,231,501]
gi|257823239|gb|EEV50171.1| trigger factor [Enterococcus faecium 1,141,733]
gi|257825690|gb|EEV52316.1| trigger factor [Enterococcus faecium 1,231,410]
gi|257830722|gb|EEV57329.1| trigger factor [Enterococcus faecium 1,231,408]
gi|257832286|gb|EEV58707.1| trigger factor [Enterococcus faecium Com12]
gi|257836204|gb|EEV61278.1| trigger factor [Enterococcus faecium Com15]
gi|260073894|gb|EEW62218.1| trigger factor [Enterococcus faecium C68]
gi|260078343|gb|EEW66048.1| trigger factor [Enterococcus faecium TC 6]
gi|289162323|gb|EFD10182.1| trigger factor tig [Enterococcus faecium D344SRF]
gi|291589165|gb|EFF20976.1| trigger factor [Enterococcus faecium E1071]
gi|291596314|gb|EFF27573.1| trigger factor [Enterococcus faecium E1679]
gi|291597173|gb|EFF28368.1| trigger factor [Enterococcus faecium U0317]
gi|291606233|gb|EFF35649.1| trigger factor [Enterococcus faecium E1162]
gi|291608117|gb|EFF37423.1| trigger factor [Enterococcus faecium E980]
gi|292643670|gb|EFF61791.1| trigger factor [Enterococcus faecium PC4.1]
gi|313590556|gb|EFR69401.1| trigger factor [Enterococcus faecium TX0133a01]
gi|313593215|gb|EFR72060.1| trigger factor [Enterococcus faecium TX0133B]
gi|313597019|gb|EFR75864.1| trigger factor [Enterococcus faecium TX0133A]
gi|313599001|gb|EFR77846.1| trigger factor [Enterococcus faecium TX0133C]
gi|313641036|gb|EFS05616.1| trigger factor [Enterococcus faecium TX0133a04]
gi|313644735|gb|EFS09315.1| trigger factor [Enterococcus faecium TX0082]
Length = 429
Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats.
Identities = 73/439 (16%), Positives = 164/439 (37%), Gaps = 23/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L I + + ++ N+ GFR GKV +YG+
Sbjct: 1 MTATFEKKGTNDGVLKFTIAQDEIQKGLTTAFNKVKKSLNVPGFRKGKVSRQVFNRMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P I + E D +
Sbjct: 61 EALYEDALNAVLPEAYEAAVKEAGIDPVSQPKIDVESM---------EKGQDWVITAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + DL V + EV + ++D ++ + +KE + D V +D+
Sbjct: 112 VKPEVKLGQYKDLVVEKQDREVTDADVDARIKREQEAQAELVIKEDAAAENGDTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + +N +GS + LVG K+G+ ++ FPED+ +DLAGK
Sbjct: 172 GFVDGEAFDGGKGENYSLELGSGSFIPGFEDQLVGHKSGESLDVNVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +I EV + ++++ A + E + ++ +++ + E
Sbjct: 232 EAVFKVTIHEVKAKEVPELDDEFAKDVDDEVSTLDELKEKYRKELVETKEKAADDAKDEA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++P +V +E + + + M + +E+ + +
Sbjct: 292 AIRMAVENAEIVELPHVMVHDEVHRSMDEFLNNMQRQGISPEMYYQLTGSTEEDLHKQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ I N++ TEEE+ + + + + +++ +
Sbjct: 352 GEAEMRTRTNLVIEAIAAAENLQATEEEINAEIQELSETYNMPIEQIKRVLTED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQ 430
L + K I+ I +
Sbjct: 407 LEHDVTMKKAIELITGTAT 425
>gi|289762631|ref|ZP_06522009.1| trigger factor [Mycobacterium tuberculosis GM 1503]
gi|289710137|gb|EFD74153.1| trigger factor [Mycobacterium tuberculosis GM 1503]
Length = 362
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 60/363 (16%), Positives = 149/363 (41%), Gaps = 15/363 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + ++V +P L F +++ + + GFRPGK P +++ G+
Sbjct: 1 MKSTVEQLSPTRVRINVEVPFAELEPDFQRAYKELAKQVRLPGFRPGKAPAKLLEARIGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +++ + + +++ D + RP+I + + E DL+ D
Sbjct: 61 EAMLDQIVNDALPSRYGQAVAESDVQPLGRPNIEVTKK---------EYGQDLQFTAEVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P+I L V+ D E+ E ++D ++ + + +GD V++D +
Sbjct: 112 IRPKISPPDLSALTVSVDPIEIGEDDVDAELQSLRTRFGTLTAVDRPVAVGDVVSIDLSA 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+VD + + + + + VGS L + + +VGL + + + AG++
Sbjct: 172 TVDGEDIPNAAAEGLSHEVGSGRLIAGLDDAVVGLSADESRVFTAKLAAG----EHAGQE 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ +++ V +++ A F+S +R S +++Q ++++ +
Sbjct: 228 AQVTVTVRSVKERELPEPDDEFAQLASEFDSIDELRASLSDQVRQAKRAQQAEQIRNATI 287
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + +PES V+ +++ +L ++ + + + A+
Sbjct: 288 DALLEQVDVPLPESYVQAQFDSVLHSALSGLNHDEARFNELLVEQGSSRAAFDAEARTAS 347
Query: 359 LTG 361
G
Sbjct: 348 EKG 350
>gi|167755845|ref|ZP_02427972.1| hypothetical protein CLORAM_01362 [Clostridium ramosum DSM 1402]
gi|167704784|gb|EDS19363.1| hypothetical protein CLORAM_01362 [Clostridium ramosum DSM 1402]
Length = 434
Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats.
Identities = 88/439 (20%), Positives = 186/439 (42%), Gaps = 22/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ K E EL V S + + ++ + I GFRPGK P + +++ K
Sbjct: 9 MKINNKKLENAIVELTVAFDSEEWKATQEKALDKLAKNVKIDGFRPGKAPAAMVRARVSK 68
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
S+L E D I++ EIL++ + +P++++ + ++D +L++++
Sbjct: 69 ASVLEEATDMILQTKFVEILTEANVEPVAQPALSVQKVDAD----------ELEVQILVP 118
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ PQ+E+ + L+V + V +KEI+ Q+A + + GD +D+
Sbjct: 119 VKPQVELGEYKGLEVKKGRVTVTKKEIEEQLANYQTQFAELTVKEGGKVAKGDTAVIDFE 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N +GS + ++G+ +++I FPED+ DLAGK
Sbjct: 179 GFVDGVAFEGGKGENYPLEIGSGSFIPGFEDQVIGMTVDKEQDIVVTFPEDYGAADLAGK 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG---FESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ ++ E+ ++++LA + E+ ++ IK E K
Sbjct: 239 EATFKVTVHEIKEKHLPEIDDELAKDVNIDGVETLDQLKDHIKANIKTRKESENENKFMD 298
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+ I + ++L+E E +LQ+V + Q ++ +
Sbjct: 299 DLYKAIVASSKVEDSDALLEQEQGLMLQEVEQNLQRQGLNFEVYQQFTGKSKDDIKEDIK 358
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ RV +L I E+ + V++EE+++ L + ++ F+ ++
Sbjct: 359 PQAEERVKLNAILAAIIEEEKLAVSDEELETELKTIAEYYQKELDEVKKIFEGN---MSR 415
Query: 412 LRAPIFEDKVIDHILKSVQ 430
+ + K +D + +++
Sbjct: 416 IENDLLTRKAVDLVKDNLK 434
>gi|298491691|ref|YP_003721868.1| trigger factor ['Nostoc azollae' 0708]
gi|298233609|gb|ADI64745.1| trigger factor ['Nostoc azollae' 0708]
Length = 460
Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats.
Identities = 79/478 (16%), Positives = 187/478 (39%), Gaps = 33/478 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+V ++ E + L++ I + + I ++ NI GFR GKVP + G
Sbjct: 1 MKVTQEKLEKSQIGLEIEITPEITKQKYEQVIRNLSGTVNIPGFRRGKVPRQILLQRLGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + ++E++ + + + + + A +P + D E L + D
Sbjct: 61 GRIKAAVLEELVPDGIEKAVKQEAISAIGQPRL---RSSFDELINNYEPGKALIFSAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV---- 175
+ P++ I+ + Q+ + D ++D + + + E + + V
Sbjct: 118 VEPEVIINQYTGFQLQAEEINYDSTKVDTVLDKERQQMATLIPVEGRASQIGDIAVVDFK 177
Query: 176 -------DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPE 228
S + + + Q + ++G+ G+ +EI FP+
Sbjct: 178 GVITKAEGEDESTEPTPIPGGEATDFQVELEEDKFIPGFISGMLGMNPGETREIPAQFPD 237
Query: 229 DHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEF 287
++ ++LAGK ++KE+ +N+D A FE+ + +R ++ ++ ++
Sbjct: 238 PYANQELAGKPALFTVTLKEIKEKELPELNDDFAQEVSEFETLAQLRASLEERSQKEAQD 297
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EE 345
+ + +L + D+P +L++ E + +L + ++S + + + + D +
Sbjct: 298 QTKANQQEALLAELIKHVEIDLPTTLIDQEVDTMLTQTAMKLSEQGLEVRKLFTQDIIPQ 357
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ A R+ + L IG + +I++T E+ + + + L ++ E
Sbjct: 358 LRERSQPEAIERLKRSLALQEIGNRESIQITSAEITARVNELLEQYADEEID-------E 410
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETF 463
A + + +K+ID +L + + +L S S+ E+ + E
Sbjct: 411 ERLQAVVEKELKNEKIIDWLLANSSV--------ELVPVGSLSTTEETDSEDHSTEAE 460
>gi|315612575|ref|ZP_07887488.1| trigger factor [Streptococcus sanguinis ATCC 49296]
gi|315315556|gb|EFU63595.1| trigger factor [Streptococcus sanguinis ATCC 49296]
Length = 427
Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKTLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 EALYQDAMNALLPNAYEVAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEGAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLDELKEKYRKELTAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDASEEEIQKEIEQLAADYNMEVAQV-----QNLLSADM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|187934599|ref|YP_001887077.1| trigger factor [Clostridium botulinum B str. Eklund 17B]
gi|238691650|sp|B2TPC0|TIG_CLOBB RecName: Full=Trigger factor; Short=TF
gi|187722752|gb|ACD23973.1| trigger factor [Clostridium botulinum B str. Eklund 17B]
Length = 427
Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats.
Identities = 85/438 (19%), Positives = 191/438 (43%), Gaps = 19/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E +L++ + + + + + + K N+ GFR GKVP++ +K +YG
Sbjct: 1 MEAKVEKIETNVVKLEIKVEAEKFDAALTKAYNKNKGKYNVPGFRKGKVPMAILKKMYGI 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + ++ I E E L D R P + I E I +L +
Sbjct: 61 EIFYDDAVNIAIDESYNEALKAEDIRPVDYPKVDIVE---------IGEGKELVYTATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
P++EI + L + + EV E+E+++Q+ E+ N E KE + + +D+
Sbjct: 112 TYPEVEIGEYKGLDIKKPSYEVSEEEVEKQVKEMQSKNARIETKEEGTIADGNIAIIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +GS E L+GL GD+KE+ FPE++ ++L K
Sbjct: 172 GFVDGEAFEGGEGTDYPLEIGSGTFIDNFEEQLIGLAIGDKKEVNVTFPENYGKEELNAK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + + ++++ A F++ + ++ +++++ ++ ++ + +
Sbjct: 232 PAMFEVTVKGIKAKELPELDDEFAKEVSEFDTLAELKENIKKRLEESNDERAEREFEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+ I D+PE ++ E + +++ + + Q + + E+ ++
Sbjct: 292 ITSIIETSKIDLPEVMLTKEIDSMMKDLESRLQYQGLSLDQYMEFTGNTMEKMREFMKEN 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAEL 412
A+R+V I+L ++ + +++ T+E++ + + P KKM + K + +
Sbjct: 352 AERKVKADIILESVAKAEDVKATDEQLNERALELGRMYGPKDPKKMANILLKAQKGM--I 409
Query: 413 RAPIFEDKVIDHILKSVQ 430
I + + I +S +
Sbjct: 410 EKDIIIENTLKLIKESCK 427
>gi|317470745|ref|ZP_07930130.1| trigger factor [Anaerostipes sp. 3_2_56FAA]
gi|316901880|gb|EFV23809.1| trigger factor [Anaerostipes sp. 3_2_56FAA]
Length = 428
Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats.
Identities = 82/439 (18%), Positives = 180/439 (41%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + ++ + + +L + + +S+ ++ GFR GKVP + I+ YG
Sbjct: 1 MGLQVEKLDNNMVKVTIEVEPEKLDAAIKKAYNKKKSQFSVPGFRKGKVPQNFIEKAYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + +I E E + D RP I + + +E
Sbjct: 61 EVFYEDAANILIPEAYSESMKDSDLDIVSRPDIDVVQ---------LEKGKPFIFTAEIA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++ + + L+V + V ++EI+ Q+ + + N V++ + GD ++Y+
Sbjct: 112 VKPEVTLGEYKGLEVEEKKIRVTKEEIEEQLKKEQEANAREITVEDRPVKDGDITLINYS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + ++ ++GS E L+G GD+ E+ FPE + +LAGK
Sbjct: 172 GSVDGEKFEGGTAEDQTLVIGSGTFIEGFEEQLIGKNIGDEIEVNVTFPEQYHAPELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
IK + ++++ A FE+ + + I+ E + + + +
Sbjct: 232 PAVFEVKIKGIKEKELPELDDEFASEVSEFETLEDYKKEIKKNIRAQKEEAAKTEKENAL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+D + D+P++++E + + + +S + ++ +
Sbjct: 292 VDQAVENASMDIPDAMIEEQVQQMADEFSQRLSYQGLNMEQYLQYTGSDAQKFAEELKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I IE +EE+ + L + G + +++ Q + ++
Sbjct: 352 ALKRIKTRLVLEAIVAAEGIEASEEDFKKELEKMAGMYQMETEQLEKMVQ--GSQKDQMM 409
Query: 414 APIFEDKVIDHILKSVQIV 432
I K +D ++ S Q
Sbjct: 410 DDIAVQKAVDFLISSCQTK 428
>gi|256846931|ref|ZP_05552385.1| trigger factor [Fusobacterium sp. 3_1_36A2]
gi|294784272|ref|ZP_06749567.1| trigger factor [Fusobacterium sp. 3_1_27]
gi|256717729|gb|EEU31288.1| trigger factor [Fusobacterium sp. 3_1_36A2]
gi|294488138|gb|EFG35489.1| trigger factor [Fusobacterium sp. 3_1_27]
Length = 431
Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats.
Identities = 88/440 (20%), Positives = 183/440 (41%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E E+ + + + + ++ + + A + GFR G VP + + Y
Sbjct: 1 MNYEVKKLEKSAVEVKLHLTAEEVKPIVDKVLTHVGEHAEVAGFRKGHVPKEALMANYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I S+ ++ I PEI+ K + I DL L D+
Sbjct: 61 HIESDVANDAINANFPEIVDKEKLEPVSYARLK-----------EINLKDDLNLTFDIDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE---TESEIGDKVTVDY 177
PQ ++ ++ L+ + E+ + ++ ++ + +N+ E E ++++ D V + +
Sbjct: 110 YPQFKLGNYKGLEAEKKSFEMTDDLLNEELEIMVRNHAKLEEVEDAGYKAQLDDTVDLAF 169
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D V ++ +GS E LVG G + EI FP+++ +LAG
Sbjct: 170 EGFMDGVPFPGGKAESHLLKLGSKSFIDNFEEQLVGYTKGQEGEITVKFPDEYHAPELAG 229
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + I + +N++ A LG+ S ++ ++I + + + +
Sbjct: 230 KPAQFKVKINAIKKLKQPELNDEFAKELGYASLDELKAKTKEEIIKRENDRIENEYVSAL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
LD + T DVP S+V+ E L+++ +++S K + + E
Sbjct: 290 LDKLLETTTIDVPVSMVQAEIQNRLKELEYQLSMQGFKMDDYLKMMGGNVETFAAQLAPA 349
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LA 410
A+++V ++L I ++NN E T+EE++ + + + + + +K N A
Sbjct: 350 AEKKVKVDLILDRIAKENNFEATDEELKERMEEVAKMYGMDVPALEEELKKNKNLENFKA 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++ I K ID ++K+ +
Sbjct: 410 SVKYDIVMKKAIDEVVKNSK 429
>gi|237667253|ref|ZP_04527237.1| trigger factor [Clostridium butyricum E4 str. BoNT E BL5262]
gi|237655601|gb|EEP53157.1| trigger factor [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 427
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 85/438 (19%), Positives = 188/438 (42%), Gaps = 19/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E +L++ + +++ + + + + NI GFR GKVP++ +K YG
Sbjct: 1 MKAKVEKIETNVVKLEIRVEADKFDAAITKAYNKNKGRYNIPGFRKGKVPMNMVKKFYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ I E E L+ + R P + + E + DL +
Sbjct: 61 EVFYDDAVNFAIDESYGEALNAENIRPVDYPQVDVVE---------LGEGKDLVYTATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++E+ + L + + + EVDE EI++Q+ ++ + N E E E GD +D+
Sbjct: 112 VYPEVELGDYKGLDIKKPVYEVDEAEIEKQIKDMQEKNARMEVKTEGTVEKGDIAVIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ E + +GS + L+GL GD+K+I FPE + ++L GK
Sbjct: 172 GYIGETAFEGGEGHDYPLEIGSGTFIDNFEDQLIGLAVGDKKDINVTFPESYGKEELNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ IKE+ ++++ A +S + ++ + ++++++ ++ + +
Sbjct: 232 AAKFEVEIKEIKVKELPELDDEFAKEVAAVDSFAELKENLKKTLEKNNDEKAEREFEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
+ + DVPE +V E + +++ + + Q Q + E+ +
Sbjct: 292 ITAVIENAKMDVPEVMVNKEIDAMMKDLEGRLKYQGLSLDQYMQFTGNTTEKMRDFMKEN 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAEL 412
A+R+V +VL + + ++ T+EE+ + + P +KM K +
Sbjct: 352 AERKVKADLVLEAVAKAEEVKATDEEINERALELGKIYGPKDPEKMAKILAKT--QKPMI 409
Query: 413 RAPIFEDKVIDHILKSVQ 430
I + + I ++ +
Sbjct: 410 EKDIVIENTLKFIKENCK 427
>gi|254302273|ref|ZP_04969631.1| peptidylprolyl isomerase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322465|gb|EDK87715.1| peptidylprolyl isomerase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 459
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 87/440 (19%), Positives = 178/440 (40%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E E+ + + + + ++ + + A + GFR G P + + Y
Sbjct: 1 MNYEVKKLEKSAVEVKLHLTAEEVKPIVDKVLAHVGEHAEVAGFRKGHAPKEALMANYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I S+ ++ I PEI+ K + I DL L D+
Sbjct: 61 HIESDVANDAINANFPEIVDKEKLEPVSY-----------VRLKEINLKDDLNLTFDIDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDY 177
PQ E+ ++ L+ + E+ + ++ ++ + +N+ E ++++ D V + +
Sbjct: 110 YPQFELGNYKGLEAEKKSFEMTDDLLNEELEIMVRNHAKLEEVEDPAYKAQLDDTVDLAF 169
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D V ++ +GS E LVG G + EI FPE++ +LAG
Sbjct: 170 EGFMDGVPFPGGKAESHLLKLGSKSFIDNFEEQLVGYTKGQEGEITVKFPEEYHAPELAG 229
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + I + +N++ A LG+ S ++ ++ + + + +
Sbjct: 230 KPAQFKVKINAIKKLRQPELNDEFAKELGYASLDELKAKTKEETIKRENDRIENEYVSAL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
LD + T DVP S+V+ E L+++ +++S K + + E
Sbjct: 290 LDKLLETTTIDVPVSMVQAEIQNRLKELEYQLSMQGFKMDDYLKMMGGNVETFAAQLAPA 349
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LA 410
A+++V ++L I ++NN E T+EE+ + + + + + +K N A
Sbjct: 350 AEKKVKIDLILDKIAKENNFEATDEELSQRMEEVAKMYGMDVPTLEEELKKNNNLDNFKA 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++ I K ID ++K +
Sbjct: 410 SVKYDIVMKKAIDEVVKESK 429
>gi|188589514|ref|YP_001921999.1| trigger factor [Clostridium botulinum E3 str. Alaska E43]
gi|251779108|ref|ZP_04822028.1| trigger factor [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|238691975|sp|B2UX14|TIG_CLOBA RecName: Full=Trigger factor; Short=TF
gi|188499795|gb|ACD52931.1| trigger factor [Clostridium botulinum E3 str. Alaska E43]
gi|243083423|gb|EES49313.1| trigger factor [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 427
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 86/438 (19%), Positives = 185/438 (42%), Gaps = 19/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E +L++ + + + + + + K N+ GFR GKVP++ +K +YG
Sbjct: 1 MEAKVEKIETNVVKLEIKVEAEKFDAALTKAYNKNKGKYNVPGFRKGKVPMAILKKMYGI 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + ++ I E E L D R P + I E I +L +
Sbjct: 61 EIFYDDAVNIAIDESYNEALKAEDIRPVDYPKVDIVE---------IGEGKELVYTATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
P++EI + L + + EV E+E+++Q+ E+ N E KE + + +D+
Sbjct: 112 TYPEVEIGEYKGLDIKKPSYEVSEEEVEKQVKEMQSKNARVETKEEGTIADGNIAIIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + +GS E LVGL GD+KE+ FPE++ ++L K
Sbjct: 172 GFVDGEAFEGGEGTDYPLEIGSGTFIDNFEEQLVGLAIGDKKEVNVTFPENYGKEELNAK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++K + ++++ A F++ + ++ +++++ + ++ + +
Sbjct: 232 PAMFEVTVKGIKVKELPELDDEFAKEVSEFDTLAELKENVKKRLEESNNERAEREFEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ I D+PE ++ E + +++ + + E+ ++
Sbjct: 292 ITSIIETSKIDLPEVMLTKEIDSMMKDLESRLQYQGLSLDQYMEFTGNTIEKMREFMKEN 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAEL 412
A+R+V I+L + + ++ T+E++ + + P KKM + K A+ +
Sbjct: 352 AERKVKADIILEAVAKAEEVKATDEQLNERALELGRMYGPKDPKKMANILLKAQKAM--I 409
Query: 413 RAPIFEDKVIDHILKSVQ 430
I + + I +S +
Sbjct: 410 EKDIIIENTLKLIKESCK 427
>gi|116333990|ref|YP_795517.1| trigger factor [Lactobacillus brevis ATCC 367]
gi|122269326|sp|Q03QN6|TIG_LACBA RecName: Full=Trigger factor; Short=TF
gi|116099337|gb|ABJ64486.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Lactobacillus brevis ATCC 367]
Length = 436
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 73/449 (16%), Positives = 175/449 (38%), Gaps = 23/449 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + EL I +++ + ++ + + + GFR G+VP +YG+
Sbjct: 1 MAAKWEKKDNNQGELTFEIAPDKIKEGLDKAFQRTKKNLAVPGFRKGRVPRQIFNQMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + + + D L+
Sbjct: 61 EALYQDALNIVLPEAYDAAIKEAGIEPVDQPQVDVESMDKD---------QPWVLKAVVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P +++ + L VT+ V +K+ID ++ + + ++ + GD V +D+
Sbjct: 112 VKPDVKLGEYKGLSVTKQNTRVYQKDIDAEIEKQRQQQAELVLKEDEAAAKGDTVVIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD + N +GS + LVG K G+ +++ FP D+ +DL K
Sbjct: 172 GYVDGKQFDGGKADNYSLELGSNSFIPGFEDQLVGHKAGEDVDVKVTFPADYQAEDLRDK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +I EV ++++ A +S + ++K+ ++ +
Sbjct: 232 EATFKVTIHEVKEKQLPELDDEFAKDVDEDVDSLEELEAKTKDRLKEQKVTAAHDAIEDE 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+ + VPE++++++ + + + M Q + +++ + +
Sbjct: 292 AISEAVDNAEIAAVPEAMLKDDIDRQMDQYLANMQQQGIEPKMYFQLTGTTEDDLRKQFA 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++R+ T +VL + E IE +E+E+ + + ++ E +
Sbjct: 352 DGAEKRIKTNLVLEAVVEAEKIEPSEDEVAAEVKDLASQYGMEESAVRSALSDD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
L+ I +D I S + +K D
Sbjct: 407 LKHDIAIKSAVDLIADSAKQDKKKDAEDD 435
>gi|187776849|ref|ZP_02993322.1| hypothetical protein CLOSPO_00388 [Clostridium sporogenes ATCC
15579]
gi|187775508|gb|EDU39310.1| hypothetical protein CLOSPO_00388 [Clostridium sporogenes ATCC
15579]
Length = 430
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 80/437 (18%), Positives = 198/437 (45%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L++ + S + ++ + + + N+ GFR GK PL+ IK YG+
Sbjct: 1 MNVKVENIEKNVVKLEITVDSEKFNEAVKKSFKKNAKRFNVPGFRKGKAPLNIIKKYYGE 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+ ++ P+ + + + + P I + + I D
Sbjct: 61 GVLFEDAINFCCEDTYPKAIEENNIKPVDYPQIDVVQ---------IGEGKDFIYTAEIT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+P++++ + ++V + EV+++ ++ ++ + + N +E E E G+ +D+
Sbjct: 112 TVPEVKLGEYKGVEVKKVSYEVEDEAVENELKSMQEKNARVSLKEEGEIEKGNIAIIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E K+ + +GS + + LVGLK + K++ FPE++ +DL GK
Sbjct: 172 GYVDGEAFEGGEAKDYELEIGSGTFIGDFEDQLVGLKKDESKKVNVSFPEEYGREDLNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+IK++ ++++ A F++ ++ ++K+ + + + +
Sbjct: 232 PATFEVTIKDIKVKELPALDDEFAKEVSEFDTLEELKSDIKDRMKKELSDKAKAEYEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ ++ ++P+ ++E E + +++ + + + +S +E+ +Y
Sbjct: 292 VEAVAANAEIEIPKVMIEKEIDNMVRDLEMRLKYQGLDLKSYYEFTNSSEEKVKEYMKET 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV T +++ I + +I+ TEEE++ + ++ + + A L
Sbjct: 352 AEKRVKTDLIMQEIAKVEDIKATEEELKEKAMEVAKQYGQKDVEKTAELIVNA-QKAYLE 410
Query: 414 APIFEDKVIDHILKSVQ 430
I KV+D ++++ +
Sbjct: 411 IDIVNGKVLDLLVENSK 427
>gi|322377075|ref|ZP_08051567.1| trigger factor [Streptococcus sp. M334]
gi|321281788|gb|EFX58796.1| trigger factor [Streptococcus sp. M334]
Length = 427
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 173/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDLEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLAELKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++
Sbjct: 352 GEAESRTKTNLVIEAVAKAEGFDASEEEIQKEIEQLAADYNMEVAQVQSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|332522833|ref|ZP_08399085.1| trigger factor [Streptococcus porcinus str. Jelinkova 176]
gi|332314097|gb|EGJ27082.1| trigger factor [Streptococcus porcinus str. Jelinkova 176]
Length = 427
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 90/441 (20%), Positives = 180/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I ++ + ++ I+ N+ GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTINQEKIKPALDQAFNKIKKDLNVPGFRKGHIPRPIFNKKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ I+ E +S+ +P I I E D ++
Sbjct: 61 EVLYEDALNIILPSAYEEAVSELALEVVAQPKIDIVSM---------EKGKDWEISAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + DL V D EV ++E+D ++ KN VKE + GD V +D+
Sbjct: 112 TKPEVKLGDYKDLTVEVDLSKEVTDEEVDEKIERERKNLAELVVKEDAAVEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG K G+ K++ FPE++ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGAKAGETKDVNVTFPENYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +I EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DAKFVTTIHEVKAKEVPELDDELAKDIDEEVETLDELKAKYRKELEAAKEIAYDDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
++ + ++PE +V +E + + + M + +E+ + Y
Sbjct: 292 AIELAVDNAEIVELPEEMVHDEVHRSMNEFMGNMQRQGISPEMYFQLTGTSEEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E T+EE++ + + +++
Sbjct: 352 AEADKRVKTNLVIEAIAKAEGFEATDEEIEKEINDLATEYNMPVEQVRSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I +S ++
Sbjct: 407 LKHDIAMKKAVEVITESAKVK 427
>gi|262282049|ref|ZP_06059818.1| trigger factor [Streptococcus sp. 2_1_36FAA]
gi|262262503|gb|EEY81200.1| trigger factor [Streptococcus sp. 2_1_36FAA]
Length = 427
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 173/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFEKKETNRGVLTFTISQEQIKPELDRVFNSVKKTINVPGFRKGHLPRPVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 EALYQDALNNLLPNAYEAAVKEAGIEVVAQPKIDVVSM---------EKGQDWTISAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+V+ + EV ++++D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVSVEVSKEVTDEDVDARIERERNNLAELVLKEGPAAEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K G+ ++ FPED+ DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEDQLVGHKAGETVDVVVTFPEDYQAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E + V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELAEGKEAAYKDAVESA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+PE +V E + + + M Q + E+ + +
Sbjct: 292 AIDLAVENAEIVDLPEEMVHEEVHRSVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQHE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ I + E + EE+++ + + ++ +
Sbjct: 352 ADAEARTKTNLVIEAIAKAEGFEASAEEIEAEISSLANDYNMEADRVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDITIKKAVEVITSTAKVK 427
>gi|332298208|ref|YP_004440130.1| Trigger factor [Treponema brennaborense DSM 12168]
gi|332181311|gb|AEE16999.1| Trigger factor [Treponema brennaborense DSM 12168]
Length = 449
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 84/456 (18%), Positives = 201/456 (44%), Gaps = 19/456 (4%)
Query: 1 MQVI--EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLY 58
M+V E +L V I + ++N+ + + GFR G VP+S ++ Y
Sbjct: 1 MKVTKEITKLENSAVKLTVTIAKKDVAQNYNDTVAKYAKNIQMPGFRKGHVPVSILERKY 60
Query: 59 GKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
G+++ ++ E+I++ + +I + ER ++E + +++ + D+ ++Y
Sbjct: 61 GEALKADAAGELIEKALGDIFEEIAERPLPYAQPAMDE------APVLDTSKDMTFTVTY 114
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTV 175
D+ P +++ F + V + V E E+ ++ +I + N + E ++
Sbjct: 115 DVFPTVKVEDFSGITVKEPQVAVGEAELKEELEQIRERNALVSDKKDGEAAAKDDIATVN 174
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
+ D +E +++ F +GS + + ++G+K G+ KEI + + +D KDL
Sbjct: 175 YCELDDDGKTVEGSERQDFVFTIGSGQNIYKIDDDVIGMKKGETKEITKKYKKDFEDKDL 234
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
AG +L ++ + ++++LA +++ ++ + ++ + +
Sbjct: 235 AGTTKKLRVTVTALKVRNLPELDDELAQDVNEKYKTLDDLKADIMKNMEAAKAKRIAEIK 294
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEM----SSANQKSQNVDSIDEEDLQY 349
+L+ + K FD+P+S++ E + + + + ++ E+ L
Sbjct: 295 SNSLLEQLVEKNAFDLPKSMIAAELDSRWRMMAQQFRTTPEQLDKMIAASGQKKEDMLTE 354
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A++ + + IV+ ++ ++ NI VT EE+++ + +++ H+ P A
Sbjct: 355 WTGDAEKMLKSRIVVESLMKERNITVTPEEIEAEYVKIAESAGISVEEVKKHY-ADPRAK 413
Query: 410 AELRAPIFEDKVIDHILKSVQIVD-RKVTFDQLFDN 444
L E K+ + + V+I K++F LF
Sbjct: 414 EYLIDDTKEQKLYKELFEQVKITKGDKMSFADLFKK 449
>gi|256847016|ref|ZP_05552462.1| trigger factor [Lactobacillus coleohominis 101-4-CHN]
gi|256715680|gb|EEU30655.1| trigger factor [Lactobacillus coleohominis 101-4-CHN]
Length = 436
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 73/440 (16%), Positives = 179/440 (40%), Gaps = 24/440 (5%)
Query: 1 MQVIEK-FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M + SE K L I + ++ + + + + GFR G VP + +YG
Sbjct: 1 MSAKWERDSEASKGTLTFDIDVETIQKGIDDAFKKTQKRITVPGFRKGHVPRAIFNQMYG 60
Query: 60 KS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + + +++++ + + + + +P I+I E ++
Sbjct: 61 EESLYQDALNDVLPDAYEAAIKETEIEPVDQPEISIESM---------EKGEPWTIKAEV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDY 177
+ P++++ + + V + EV + ++D ++ + ++ + GD V +DY
Sbjct: 112 AVKPEVKLGDYKGMSVPKQDTEVSDADVDAELENKRQQQAELVLKEDEPAANGDTVVIDY 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+VD + S N +GS + LVG K + +++ FPED+ K+LAG
Sbjct: 172 VGTVDGEKFDGGSADNYSLELGSGSFILGFEDQLVGHKADEDVDVKVTFPEDYHAKNLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K+ N I+EV ++++ A ++ A++ +++++ E + ++
Sbjct: 232 KEAVFNVKIQEVKEKQLPELDDEFAKDVDEDVDTLDALKDKTKKQLQEQKEEAAKSAIED 291
Query: 296 QILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYY 350
++ D+P+++++ + + +Q+ M Q ++ + +
Sbjct: 292 AAIEAAVKNAEIEDIPQAMLDQDTDRQVQQYLAGMQQQGINPQMYFQITGTSQDDLKKQF 351
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A +RV T +VL I + +++ ++++++ + +F E + K
Sbjct: 352 ANDADKRVKTNLVLEAIVKDADLKASDDDIKKEISDLAKQFGMEEDAVEKSLTKD----- 406
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
L I K +D + +
Sbjct: 407 MLAHDIEIKKAVDLVADFAK 426
>gi|153871191|ref|ZP_02000425.1| trigger factor [Beggiatoa sp. PS]
gi|152072340|gb|EDN69572.1| trigger factor [Beggiatoa sp. PS]
Length = 394
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 76/406 (18%), Positives = 175/406 (43%), Gaps = 21/406 (5%)
Query: 35 IRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITI 94
+ + I GFRPGKVP+ ++ YG+ + E + EI++ E +++ P+ +
Sbjct: 1 MAHQTKINGFRPGKVPMKVVEQRYGQKVRQEILGEILQSSFSEAITQEKLHPIGEPTFNL 60
Query: 95 NEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIA 154
N + G L ++I P+I + L + + ++++ +ID + +
Sbjct: 61 NTDLKLLEQG-------LSYTAIFEIYPEIPALQVEGLSIEKLTAQINDSDIDTMLQRLR 113
Query: 155 KNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGL 214
+ + E ++ GD++ +D+ + D K + + + L+G+
Sbjct: 114 QQRQTWNRVERPTKEGDRIIIDFVDTQGKEFKTDGFKPIPIIVGQPSLILPGIETKLIGV 173
Query: 215 KTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESA 272
+ EIE FP D+ D AG+ + L I V +N + A G
Sbjct: 174 NANENHEIELTFPADYPKPDFAGQTLPLTIRILSVEEGHLPEMNEEFAKAFGVADGSIET 233
Query: 273 MRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA 332
+R +++ + +++K+Q+LD + +VP+SL++NE + + E +
Sbjct: 234 LRQDARDNMERELIYAQERRLKQQVLDELITANPIEVPQSLIKNEAQRLAKMREQEWKTQ 293
Query: 333 NQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP 392
N + + + A +RV GI++G + + + I+ +++Q + + +
Sbjct: 294 NLR-----------AEIFTEEALKRVKIGILVGELIKIHKIKAPPDKVQQMVERIAFAY- 341
Query: 393 GHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTF 438
+ ++ + + E+ + + ED+V++ +L+ Q+ ++ F
Sbjct: 342 EDREAIIKAYYADTERMKEVESMVLEDEVVNWLLERSQVTEKNTDF 387
>gi|220909723|ref|YP_002485034.1| trigger factor [Cyanothece sp. PCC 7425]
gi|219866334|gb|ACL46673.1| trigger factor [Cyanothece sp. PCC 7425]
Length = 500
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 72/494 (14%), Positives = 190/494 (38%), Gaps = 35/494 (7%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
++ ++ + L++ +P+ ++ + D A+I GFR GKVP + G++
Sbjct: 16 KITQEKLPASQIGLEIEVPAELSRQIYDRVVNDFVRSADIPGFRKGKVPRQVVLQRIGQA 75
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + ++E+++ + + + + + + + + L D+
Sbjct: 76 RLKAAAVEELVQNGLQQAIDQEKLAVLGNFQLNSD---FEQLVNQYQPGAALTFSAKVDV 132
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV----- 175
P++++ + +L VT E D +++ +AE + E V
Sbjct: 133 SPEVKLGDYKNLAVTAQAAEYDPTKVETVLAEHQQERATLIPVEERPAQLGDVVQVDFAG 192
Query: 176 ---------------DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQK 220
+ K+ Q + E ++G+ G+ K
Sbjct: 193 RLVPGEDKAAEGETESAEAQETANDILGGEAKDFQLELTPGRFIPGFIEGVIGMTPGETK 252
Query: 221 EIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQ 279
EI FPED+ ++L+G++ ++ ++ ++++ A F++ + ++ +
Sbjct: 253 EIPVTFPEDYFQEELSGQQAVFTVTLSDIKEKELPSLDDEFAQEISEFKTLAELQQFLEE 312
Query: 280 KIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV 339
+ ++ +E + + IL + D+PE+LV NE N +L ++ + S +
Sbjct: 313 RYQKEAEQQTQANINEAILAELLTTLEVDLPETLVNNEVNFLLTQMATRLQSQGIDVNQL 372
Query: 340 DSIDEED--LQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK 397
+ + + A+ R+ + L + ++ +I+V ++++ L + G +
Sbjct: 373 LTDELIPKLREQARPEAEVRIKRSLSLAEVAKQESIQVDPKQVEERYQALLQQLSGRKID 432
Query: 398 MLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFD-QLFDNSSESSPEKLLDK 456
+ + + E++V+ + QI + T ++S+ + PE+++
Sbjct: 433 -------RDRLRSVVTEELLEEQVLQWLKDHAQIELTQATESTDASESSAAAEPEEVIAV 485
Query: 457 SSKVETFQSEEAPS 470
+ V+ E
Sbjct: 486 DAVVDQSPETEPSK 499
>gi|309799720|ref|ZP_07693937.1| trigger factor [Streptococcus infantis SK1302]
gi|308116676|gb|EFO54135.1| trigger factor [Streptococcus infantis SK1302]
Length = 427
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 78/441 (17%), Positives = 173/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKSLNVPGFRKGHLPRPIFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVIVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLDELKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+PE ++ E + + + + Q + E+ + +
Sbjct: 292 AIDKAVENAEIVDLPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQHE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + TEEE+Q + Q + ++
Sbjct: 352 AEAESRTKTNLVIEAVAKAEGFDATEEEIQKEIEQLAADYNMEVAQVQSLLSA-----EM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDIAVKKAVELITSTATVK 427
>gi|32473840|ref|NP_866834.1| trigger factor [Rhodopirellula baltica SH 1]
gi|32444376|emb|CAD74375.1| trigger factor [Rhodopirellula baltica SH 1]
Length = 587
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 71/436 (16%), Positives = 170/436 (38%), Gaps = 14/436 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V RE+ V IP + + +++ +A + GFR G+ P ++ +
Sbjct: 108 MEVT--KPHACLREVVVTIPRGEVDRYMKDAYDELVPEAQVPGFRAGRAPRKLVEKQFKD 165
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++ + + ++ + A P D S + + K + S ++
Sbjct: 166 RIEDRVKGSLLMDSLAKVTEDAEFSAIGEPDF-------DYESIELPEKGEFKYQFSIEV 218
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E + L++ + + + E+++D + + + E + +EIGD++ +
Sbjct: 219 RPEFETPDWKKLELKKPVETISEEDVDAALQRVLSRYASLEASDAPAEIGDRLLITGKFV 278
Query: 181 VDNVILEDQSKKNVQFIVG---SADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ + ++ V S + E++ K GD + E H+ +++ G
Sbjct: 279 DGEKTISEMDEERVTLANRLSLSDAVCENFGELMKDCKEGDVVTGKVKLGEGHANEEMQG 338
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+V F++ EV + ++ FE+E +R +++ + F Q ++
Sbjct: 339 KEVDATFTVVEVLKEQLPELTSEFLDELGEFETEDELREFVRASLERQANFRTEQAMRGS 398
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I++ + F++P +LV + L + E + + Q +
Sbjct: 399 IIEKLLASADFELPPTLVRRQMKRELDRKVLEFRRSGFDDDMIRRFVNASKQNMQQGTES 458
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ +L I ++ I+ +E ++ + + +++ +K + LR I
Sbjct: 459 SLREHFILEQIADEEKIDAEPQEYETEIQLIAEQSDSSPRRVRARLEKT-GQMDALRNQI 517
Query: 417 FEDKVIDHILKSVQIV 432
E KVI+ I ++ +
Sbjct: 518 VERKVIELISEAATVT 533
>gi|322383235|ref|ZP_08057046.1| trigger factor-like protein [Paenibacillus larvae subsp. larvae
B-3650]
gi|321152504|gb|EFX45290.1| trigger factor-like protein [Paenibacillus larvae subsp. larvae
B-3650]
Length = 433
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 75/443 (16%), Positives = 188/443 (42%), Gaps = 18/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E LD+ + +++ ++ ++ + + K N+ GFR GKVP + +G
Sbjct: 1 MKASWEKIEKNTAVLDIEVEESKVAEALDKAFKKVVKKVNVPGFRKGKVPRQIFEKKFGI 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D I+ E E +++ RP + + + LK +++
Sbjct: 61 DVLYQDALDIILPEAYMEAVNETGIEPVGRPEVDVEQ---------FAKGQTLKFKVTVT 111
Query: 120 ILPQIEISSFDDLQVT--QDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+ P++++ + L+V + + +E + + + + + + +E G+ +D+
Sbjct: 112 VKPEVKLGEYKGLEVPAGETVVTEEEIKEELERLQQRHAELEVAEEGAAAENGNITVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD E + +GS E +VG+K ++K+IE FPED+ ++L G
Sbjct: 172 EGFVDGEAFEGGKAEKYTLELGSGSFIPGFEEQVVGMKKDEEKDIEATFPEDYHAEELKG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
KK + ++ ++++ A F++ + QK+ + + K +
Sbjct: 232 KKAVFKVKLHDIKRKNLPELDDEFAKDISEFDTLEEYKKDLKQKLSEKKNQEQQAKREAA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHM 352
+++ + D+P ++E E + ++Q+ + Q + +
Sbjct: 292 VVEKAAANAEVDIPAEMIEAEQDQMVQEFERRLGMQGMNLDLYFQFSGQNVDTLKEQMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV +VL I E+ NI ++E + + + + + +++ F+ +L+ +
Sbjct: 352 DAEKRVRNNLVLEAIAEQENITASDENVNAEIEKLAESYQRTAEEIRSIFEAN-GSLSSM 410
Query: 413 RAPIFEDKVIDHILKSVQIVDRK 435
+ + K +D +L++ + +
Sbjct: 411 KQDLAIRKTVDFLLENSKTEKAE 433
>gi|168183549|ref|ZP_02618213.1| trigger factor [Clostridium botulinum Bf]
gi|237796688|ref|YP_002864240.1| trigger factor [Clostridium botulinum Ba4 str. 657]
gi|259533557|sp|C3KU78|TIG_CLOB6 RecName: Full=Trigger factor; Short=TF
gi|182673304|gb|EDT85265.1| trigger factor [Clostridium botulinum Bf]
gi|229263817|gb|ACQ54850.1| trigger factor [Clostridium botulinum Ba4 str. 657]
Length = 430
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 197/437 (45%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L++ + S + ++ + + + N+ GFR GK PL+ IK YG+
Sbjct: 1 MNVKVENIEKNVVKLEITVDSEKFNEAVKKSFKKNAKRFNVPGFRKGKAPLNIIKKYYGE 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+ ++ P+ + + + + P I + + I D
Sbjct: 61 GVLFEDAINFCCEDTYPKAIEENNIKPVDYPQIDVVQ---------IGEGKDFIYTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+P++++ + ++V + EV+++ ++ ++ + + N +E E E G+ +D+
Sbjct: 112 TVPEVKLGEYKGVEVKKVSYEVEDEAVENELKSMQEKNARVSLKEEGEIEKGNIAIIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E K+ + +GS + + LVGLK + KE+ FPE++ +DL GK
Sbjct: 172 GYVDGKAFEGGEAKDYEIEIGSGTFIGDFEDQLVGLKKDESKEVNVSFPEEYGREDLNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+IK++ ++++ A F++ ++ ++K+ + + + +
Sbjct: 232 PATFEVTIKDIKVKELPALDDEFAKEVSEFDTLEELKSDIKDRMKKELSEKAKAEYEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ ++ ++P+ ++E E +++ + + + +S +E+ +Y
Sbjct: 292 VEAVAANAEIEIPKVMIEKEIENMVRDLEMRLKYQGLDLKSYYEFTNSSEEKVKEYMRET 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV T +++ I + +I+ TEEE++ + ++ + + A L
Sbjct: 352 AEKRVKTDLIMQEIAKVEDIKATEEELKEKAMEVAKQYGQKDIEKTAELIVNA-QKAYLE 410
Query: 414 APIFEDKVIDHILKSVQ 430
I KV+D ++++ +
Sbjct: 411 IDIVNGKVLDLLVENSK 427
>gi|306818242|ref|ZP_07451972.1| trigger factor [Mobiluncus mulieris ATCC 35239]
gi|304648981|gb|EFM46276.1| trigger factor [Mobiluncus mulieris ATCC 35239]
Length = 443
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 72/470 (15%), Positives = 187/470 (39%), Gaps = 32/470 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K ++ V +P ++ ++ + NI GFR G+ P ++S G+
Sbjct: 1 MKSTVENLNPTKVKITVEVPYEEFKPEMDKVFKEYSKQMNIPGFRRGRAPARVVESYVGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + ++ + E +++ + +P+I + SD + DLK + +
Sbjct: 61 GAVIEDAVNHAMPEYYGQVVEENKLAPLGKPAIEV----SDTPNIEGNAGGDLKFSVEVE 116
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I P++++ F +++ + EV ++++ ++ + + + + E + D VT+D
Sbjct: 117 IRPEVKLPEFSGIELEVEPVEVKAEDVEEELTALRRRFASLKSVERAVKDEDFVTIDVVT 176
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ +++ ++ + + GS + + L GLK G+ KE + + A
Sbjct: 177 KQGDEEIDNMTQVSYRV--GSGGILDGLDDALKGLKAGEVKEFKTQLKSGPHGGEEA--- 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
N + V + ++++ A+ ++ R + + + + +++
Sbjct: 232 -LANVVLGSVKEQVLPELDDEFAMMVSDHDTIDDFRKEMEETVTKQKRAEQALDARDKLV 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ F +PE +VE+ +++ +E+ Q L ++ +
Sbjct: 291 QKLVGDLEFPLPEGVVEDTLATQVRE----------------EDSDEEKQRVRELVEKDL 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T I+L T+ EK + VT+EE+ + Q + +L ++ N + I
Sbjct: 335 KTQIILDTLAEKRQMNVTQEELLQFILQTAQTYGMDPSALLSSAEQN-NRIPAFIQEIAR 393
Query: 419 DKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+K I L V + D ++ + + + + ++ ++
Sbjct: 394 NKAIAAALSEVSVKDTKGQELDLSEFIGLDEDDDADAADESDAESAETEA 443
>gi|229827571|ref|ZP_04453640.1| hypothetical protein GCWU000182_02960 [Abiotrophia defectiva ATCC
49176]
gi|229788209|gb|EEP24323.1| hypothetical protein GCWU000182_02960 [Abiotrophia defectiva ATCC
49176]
Length = 452
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 81/435 (18%), Positives = 175/435 (40%), Gaps = 19/435 (4%)
Query: 1 MQVIEKFSE-GLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M V + E +L + + L + N+ +++ + GFR GK PL+ I+ +YG
Sbjct: 1 MSVKIENLEQKNMVKLTIEREATELDAAINKVYHKQKNRIAVPGFRKGKAPLAMIEKMYG 60
Query: 60 KSI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + +EII E + +P I + + IE +
Sbjct: 61 TEVFFEDAANEIIGAAYEEAAKESGLEIVSQPEIEVTQ---------IEKGKPFIFTATV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDY 177
P++E+ + + V + V E+E++ ++ + N +V++ E+ GD+ +D+
Sbjct: 112 ATKPEVELGEYKGVSVAKVDTAVSEEELNNEIDQDRNKNARTIKVEDGEAVNGDETVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD + +N +GS + ++G K GD+ ++ FPE++ K LAG
Sbjct: 172 DGYVDGEQFDGGKSENYPLTLGSHAFIEGFEDQIIGHKAGDEFDVNVTFPEEYHAKALAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K ++KE+ +++D +++ + + S+++ + + +
Sbjct: 232 KPAVFKVALKEIKRKELPELDDDFVQDVSEYDTVAEYKKAISKRVAERKANAAKSAKEEA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+D + D+PE++VE + + Q + Q Q + ++
Sbjct: 292 AIDKVIEAAKMDIPEAMVEAQTRQMAQDFANRIRQQGLSPEQYFQFTGMTPDTFMENLRP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A +R+ + +VL + + NIE TEE+ L + + K+ + + +
Sbjct: 352 QALKRIQSRLVLEAVVKAENIEATEEDFNKELEEMSKTYNMEIDKLKESIGE--EEKKSM 409
Query: 413 RAPIFEDKVIDHILK 427
+ K +D I
Sbjct: 410 MLDLAVSKAVDFIRD 424
>gi|169334561|ref|ZP_02861754.1| hypothetical protein ANASTE_00964 [Anaerofustis stercorihominis DSM
17244]
gi|169259278|gb|EDS73244.1| hypothetical protein ANASTE_00964 [Anaerofustis stercorihominis DSM
17244]
Length = 441
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 75/443 (16%), Positives = 180/443 (40%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M I E + + + + + + + + R K NI GFR GK P I++ YG+
Sbjct: 1 MSSILDKKENNVATITITVTAEDFSKALDAAYKKNRGKFNIDGFRKGKAPRRIIENRYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +DE + + + + + P++T I + +
Sbjct: 61 GVFFEDALDEAFPSEYEKAIEEHNLKPVNMPAMT--------KLDSISKEEGATFTIEVE 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P+ E+ + +++ E +K+++ ++ + + N ++TE++ GD V +D+
Sbjct: 113 LEPEFELGEYKGIEIYSTEYEATDKDVEDELERVREQNARLISVEDTEAKDGDTVIIDFD 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V + E +N ++GS + LVG K G++ ++ FPE++ +LAGK
Sbjct: 173 GYVGDEPFEGGKGENYPLVLGSNSFIPGFEDQLVGKKAGEETDVNVTFPEEYHAAELAGK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I EV + +++D A F++ + + IK+ E ++ I
Sbjct: 233 DSVFKVKIHEVKAKELPELDDDFAADISEFDTLDEYKESLKKTIKEQRENNLKGAAINTI 292
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN---------QKSQNVDSIDEEDLQ 348
++ + D+P+ +++ + + + ++ + K QN + +
Sbjct: 293 IEEVCKNTEIDIPKCMIDRKTEDVKAQFEQQIMQSGIDPKTYYEIMKQQNDGKNEADFDA 352
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ A+ V +VL + E + +V++EE ++ + + +
Sbjct: 353 LFVEQAEHDVKQDLVLNKLMEVESFDVSDEEKEAEYENFAKAYNQKVEDFKKVLDEATE- 411
Query: 409 LAELRAPIFEDKVIDHILKSVQI 431
+ I + K+ D ++++ ++
Sbjct: 412 -NYIENFIKQRKLFDFLIENAKV 433
>gi|322391514|ref|ZP_08064983.1| trigger factor [Streptococcus peroris ATCC 700780]
gi|321145597|gb|EFX40989.1| trigger factor [Streptococcus peroris ATCC 700780]
Length = 427
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 76/441 (17%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTIAQDQIKPELDRVFNSVKKTINVPGFRKGHLPRPVFDQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 EALYQDAMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVLKEAAAEKGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ + + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLAELKEKYRKELAETKAEAYKDAVESA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVDLPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE++ + Q + ++ + +
Sbjct: 352 AEAESRTKTNLVVEAVAKAEGFDASEEEIKKEIEQLATDYNMEVAQV-----QNLLSTEM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITVKKAVELITSTATVK 427
>gi|288904470|ref|YP_003429691.1| trigger factor (prolyl isomerase) [Streptococcus gallolyticus
UCN34]
gi|306830505|ref|ZP_07463674.1| trigger factor [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|325977484|ref|YP_004287200.1| trigger factor [Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|288731195|emb|CBI12743.1| trigger factor (prolyl isomerase) [Streptococcus gallolyticus
UCN34]
gi|304427351|gb|EFM30454.1| trigger factor [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|325177412|emb|CBZ47456.1| trigger factor [Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 427
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 82/441 (18%), Positives = 182/441 (41%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + I +++ + ++ ++ N GFR G +P + +G+
Sbjct: 1 MSVSFENKATNRGVITFTIGQDKIQPALDQAFNKVKKNLNAPGFRKGHMPRAVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ I+ +++ +P I I E + L
Sbjct: 61 EALYEDALNAILPAAYEAAVAELSLDVVAQPKIDIQSM---------EKGQEWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + DL+V+ + EV + E+D ++ N +KE +E+GD V +D+
Sbjct: 112 TKPEVKLGDYKDLEVSVEATKEVTDAEVDEKVERERNNLAELIIKEDAAELGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K G+ E+ FPE++ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAKAGETVEVNVTFPENYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DAKFVTTVHEVKAKEVPALDDELAKDIDEEVETLDELKAKYRKELEAAKEIAYDDAVEGA 291
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
L+ ++N ++PE +V +E + + + M + +E+ + Y
Sbjct: 292 ALELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E ++EE++ + + +++ +
Sbjct: 352 ADADKRVKTNLVIEAIAKAEGFEASDEEIEKEINDLASEYNMEVEQVRNLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K +D + + ++
Sbjct: 407 LKHDIAMKKAVDVVTSTAKVK 427
>gi|257865953|ref|ZP_05645606.1| trigger factor [Enterococcus casseliflavus EC30]
gi|257872286|ref|ZP_05651939.1| trigger factor [Enterococcus casseliflavus EC10]
gi|257875580|ref|ZP_05655233.1| trigger factor [Enterococcus casseliflavus EC20]
gi|257799887|gb|EEV28939.1| trigger factor [Enterococcus casseliflavus EC30]
gi|257806450|gb|EEV35272.1| trigger factor [Enterococcus casseliflavus EC10]
gi|257809746|gb|EEV38566.1| trigger factor [Enterococcus casseliflavus EC20]
Length = 427
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/439 (16%), Positives = 168/439 (38%), Gaps = 23/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L I + ++ N+ GFR GKV +YG+
Sbjct: 1 MTAKWEKTGTNDGVLTFTIAQAEIQKGLTTAFNKVKGNLNVPGFRKGKVSRQVFNRMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P I ++ E D ++
Sbjct: 61 EALYEDALNAVLPEAYEAAVKEAGIDPVAQPKIDVDSM---------EKGQDWVIKAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++++ + +L V + EV E+++D ++ + ++ +E GD V +D+
Sbjct: 112 VKPEVKLGDYKELTVEKQDREVTEEDVDARIKREQEAQAELVIKEDEAAENGDTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ E +N +GS E LVG K GD K++ FPED+ +DLAGK
Sbjct: 172 GFLGEETFEGGKGENYSLELGSNSFIPGFEEQLVGTKAGDSKDVTVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++ A ES + ++ ++ + E
Sbjct: 232 EAVFKVTVHEVKAKELPELDDEFAKDVDDSVESLAELKEKYRAELTETKEKAAEDAKDEA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++P S+V +E + + + M + + + +
Sbjct: 292 AIRQAVENAEIVELPHSMVHDEVHRSMDEFLNNMQRQGISPEMYYQLTGSTEADLHTQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ RV T +V+ I + +E TEE++++ + + + ++ +
Sbjct: 352 GEAETRVKTNLVIEAIAKAEGLEATEEDIENEIKELSEAYNMPVDQIKRVLTED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQ 430
L+ I K ++ + + +
Sbjct: 407 LKHDITMKKAVELVTGTAK 425
>gi|307706050|ref|ZP_07642870.1| trigger factor [Streptococcus mitis SK321]
gi|307618561|gb|EFN97708.1| trigger factor [Streptococcus mitis SK321]
Length = 427
Score = 172 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 77/441 (17%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I +++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFENKETNRGVLTFTISQDQIKPELDRVFNSVKKSLNVPGFRKGHLPRPIFDKKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 ESLYQDVMNALLPNAYEAAVKEAGLEVVAQPKIDVTSM---------EKGQDWVITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ D EV + +++ ++ N +KE +E GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVDVEKEVTDADVEERIERERNNLAELVIKEAAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS + LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEDQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV + ++++LA E+ + ++ +++ E + V+
Sbjct: 232 EAKFVTTIHEVKAKEVPALDDELAKDIDEEVETLAELKEKYRKELAAAKEEAYKDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE ++ E + + + + Q + E+ + Y
Sbjct: 292 AIDKAVENAEIVELPEEMIHEEVHRSVNEFLGNLQRQGINPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + + +EEE+Q + Q + ++
Sbjct: 352 GEAESRTKTNLVIEAVAKAEGFDASEEEIQKEIEQLATDYNMEVAQVQSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDITIKKAVELITSTATVK 427
>gi|34762749|ref|ZP_00143738.1| Trigger factor, ppiase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27887599|gb|EAA24679.1| Trigger factor, ppiase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 431
Score = 172 bits (434), Expect = 2e-40, Method: Composition-based stats.
Identities = 87/440 (19%), Positives = 180/440 (40%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E E+ + + + + ++ + + A + GFR G P + + Y
Sbjct: 1 MNYEVKKLEKSAVEVKLHLTAEEVKPIVDKVLAHVGEHAEVAGFRKGHAPKEALMANYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I S+ ++ I PEI+ K + I DL L D+
Sbjct: 61 HIESDVANDAINANFPEIVDKEKLEPVSY-----------VRLKEINLKDDLNLTFDIDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE---TESEIGDKVTVDY 177
PQ E+ ++ L+ + E+ + ++ ++ + +N+ E E ++++ D V + +
Sbjct: 110 YPQFELGNYKGLEAEKKSFEMTDDLLNEELEIMVRNHAKLEEVEDAGYKAQLDDTVDLAF 169
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D V ++ +GS E LVG G + EI FP+++ +LAG
Sbjct: 170 EGFMDGVPFPGGKAESHLLKLGSKSFIDNFEEQLVGYTKGQEGEITVKFPDEYHAPELAG 229
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + I + +N++ A LG+ S ++ ++ + + + +
Sbjct: 230 KPAQFKVKINAIKKLKQPELNDEFAKELGYASLDELKAKTKEETIKRENDRIENEYVSAL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
LD + T DVP S+V+ E L+++ +++S K + + E
Sbjct: 290 LDKLMETTTIDVPVSMVQAEIQNRLKELEYQLSMQGFKMDDYLKMMGGNVETFAAQLAPA 349
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LA 410
A+++V ++L I ++NN E T+EE+ + + + + + +K N A
Sbjct: 350 AEKKVKVDLILDRIAKENNFEATDEELSQRMEEVAKMYGMDVPALEEELKKNKNLENFKA 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++ I K ID ++K+ +
Sbjct: 410 SVKYDIVMKKAIDEVVKNSK 429
>gi|282856774|ref|ZP_06266035.1| trigger factor [Pyramidobacter piscolens W5455]
gi|282585397|gb|EFB90704.1| trigger factor [Pyramidobacter piscolens W5455]
Length = 450
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 77/451 (17%), Positives = 181/451 (40%), Gaps = 21/451 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ E + V + + +I + NI GFR GK P + ++ GK
Sbjct: 1 MKSELLSQEKNIVTIKVTVDQAGYAAQLKKTYAEIAKRVNIPGFRKGKAPKAVLEMRLGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
SI+S+ +++++ +++ E+ ++ D P++ ++ D+ + Y+
Sbjct: 61 DSIMSQALEDMLPKVLDEVCAEYDLEPIASPTVD---------DLNMKEGEDVTFTVKYE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT- 178
+ P++ + D+ V + V E +D + + K ++ + GDKV Y+
Sbjct: 112 VEPEVTLPELSDITVDLPVFAVSESMVDEALENMKKRLATYKPVNRPARHGDKVRAAYSL 171
Query: 179 --VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
D + + F + + E E L G + G +K + +D+ K +A
Sbjct: 172 VVKDDDGKDVMSHEPQIDTFELDHLSMRPEIVEALTGTEAGTKKSADINVADDYRDKTVA 231
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES---ESAMRGLCSQKIKQHSEFLVRQKV 293
GK F + EV P+ ++++ ++ E E+ +R + + + + R
Sbjct: 232 GKTAHYEFDVIEVQEPVAPEMDDEFFKKVTSEDVHSEAELRATIRENLDKRLKADARTAA 291
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEEDLQ 348
+ + + I+ ++P+S+V + + ++ + + ++ EE +
Sbjct: 292 ENEAVAKITEASQVELPDSMVRRQREHLRKRFEENVKQRTKMSLEEYYKSEGHDLEELEE 351
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
A+R V+ +V+ +K + V +E++ + Q + + D +K P
Sbjct: 352 NLEKDARRDVMGYLVVDACAKKFGVSVRKEDLDGEIAQMAANYGISSDSIKDMLKKRPED 411
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFD 439
+ + K + I++ V++ + K D
Sbjct: 412 FENMISQARYRKTLQAIMEKVKVNEVKKGVD 442
>gi|157150639|ref|YP_001449728.1| trigger factor [Streptococcus gordonii str. Challis substr. CH1]
gi|189035961|sp|A8AVB8|TIG_STRGC RecName: Full=Trigger factor; Short=TF
gi|157075433|gb|ABV10116.1| trigger factor [Streptococcus gordonii str. Challis substr. CH1]
Length = 427
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 173/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + ++ N+ GFR G +P +G+
Sbjct: 1 MSVSFEKKETNRGVLTFTISQEQIKPELDRVFNSVKKTINVPGFRKGHLPRPVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E D +
Sbjct: 61 EALYQDALNNLLPNAYEAAVKEAGIEVVAQPKIDVVSM---------EKGQDWTISAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+V+ + EV ++++D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVSVEVSKEVTDEDVDARIERERNNLAELVLKEGPAAEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K G+ ++ FPED+ DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEDQLVGHKAGETVDVVVTFPEDYQAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E + V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELAEGKEAAYKDAVESA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D ++PE +V E + + + M Q + E+ + +
Sbjct: 292 AIDLAVENAEIVELPEEMVHEEVHRSVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQHE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ I + E + EE+++ + + ++ +
Sbjct: 352 ADAEARTKTNLVIEAIAKAEGFEASAEEIEAEISSLANDYNMEADRVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDITIKKAVEVITSTAKVK 427
>gi|222152506|ref|YP_002561681.1| trigger factor [Streptococcus uberis 0140J]
gi|254789024|sp|B9DTJ5|TIG_STRU0 RecName: Full=Trigger factor; Short=TF
gi|222113317|emb|CAR40892.1| trigger factor (prolyl isomerase) [Streptococcus uberis 0140J]
Length = 427
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 87/441 (19%), Positives = 183/441 (41%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N+ GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTIGQDKIKPALDQAFNKIKKDLNVPGFRKGHLPRPIFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ +++ D +P I + E D ++
Sbjct: 61 EVLYEDALNIVLPAAYEAAVAELDLAVVAQPKIDVVSM---------EKGKDWEISAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + DL V + EV ++E+D ++ +N VKE + GD V +D+
Sbjct: 112 TKPEVKLGEYKDLAVEVEASKEVTDEEVDAKIERERQNLAELVVKEDAAVEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + +N +GS + LVG K G+ K +E FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGENFSLELGSGQFIPGFEDQLVGTKAGETKNVEVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ EV S ++++LA E+ ++ ++++ E V+
Sbjct: 232 AATFVTTVHEVKSKEVPALDDELAKDIDEEVETLDELKAKYRKELEAAKEIAFDDAVEGA 291
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
++ ++N ++PE +V +E + + + M + E+ + Y
Sbjct: 292 AIELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E T+EE++ + + +++
Sbjct: 352 SEADKRVKTNLVIEAIAKAEGFEATDEEIEKEINDLATEYNMPVEQVRTLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I ++V++
Sbjct: 407 LKHDIAMKKAVEVITETVKVK 427
>gi|116511349|ref|YP_808565.1| trigger factor [Lactococcus lactis subsp. cremoris SK11]
gi|123125777|sp|Q031H9|TIG_LACLS RecName: Full=Trigger factor; Short=TF
gi|116107003|gb|ABJ72143.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Lactococcus lactis subsp. cremoris SK11]
Length = 427
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 86/441 (19%), Positives = 182/441 (41%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + K L I + ++ +++ ++ GFR GK+ +YG+
Sbjct: 1 MTVSFEKTSDTKGTLSFSIDQETIKTGLDKAFNKVKANISVPGFRKGKISRQMFNKMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++ ++ + + +P I + +E D +L
Sbjct: 61 EALFEEALNAVLPTAYDAAVKEAAIEPVAQPKIDV---------AKMEKGSDWELTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
+ P I + + DL V D EV ++E++ ++ N VKET +E GD V +D+
Sbjct: 112 VKPTITLGDYKDLTVEVDATKEVTDEEVETRLTNAQNNLAELVVKETAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E N +GS E LVG K+G+ E++ FPE++ +DLAGK
Sbjct: 172 GSVDGVEFEGGKGSNHSLELGSGQFIPGFEEQLVGTKSGETVEVKVTFPENYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHS-EFLVRQKVKR 295
+ ++ EV + ++++LA E+ ++ +++++ E
Sbjct: 232 EALFVTTVNEVKAKELPELDDELAKDIDEEVETLEELKAKFRKELEESKSEAYDDAVETA 291
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
I ++N ++PE ++ E + + + M + +++ + Y
Sbjct: 292 AIEAAVANAEIKEIPEEMIHEEVHRAMNEFLGGMQQQGISPEMYFQITGTSEDDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + ++EE+++ + G++ +++ +
Sbjct: 352 ADADKRVRTNLVIEAIAAAESFTTSDEEVKAEIEDLAGQYNMPVEQVEKLLP-----VDM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAMKKAVEVIATTAKVK 427
>gi|296123570|ref|YP_003631348.1| trigger factor [Planctomyces limnophilus DSM 3776]
gi|296015910|gb|ADG69149.1| trigger factor [Planctomyces limnophilus DSM 3776]
Length = 516
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 87/442 (19%), Positives = 179/442 (40%), Gaps = 12/442 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+V + +R + V I + ++ + +++ + A + GFR GKVP I+ + K
Sbjct: 54 EVDVQTVGPCRRHVRVKIAEAEIQEARKQCVKEFGTSAAVPGFRVGKVPAGLIERRFNKE 113
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I ++++ E + ++ + P D+ S I T D + ++
Sbjct: 114 ISERIREKLLIESLEQLGEDKSIEPIDEPQF-------DVASLQIPDTGDFEYEFDVEVR 166
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P+ EI ++ L + + + V E EI++++ + V + GD V
Sbjct: 167 PEFEIPAYSGLSIKRPVHTVSESEIEKRIRDYQIERATERVVDRPVAAGDYARVTLEFRH 226
Query: 182 DNVILEDQSKKNVQFIVG---SADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ L S + V + ++L+G K GD + +L G+
Sbjct: 227 ADNKLSTVSNQRVVVRPSLKLRDGEITGFDQLLIGAKAGDVLTTSLVVTPEAENVELRGE 286
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+++N ++ V V +++A ES +R + +++ + RQ+ +RQ+L
Sbjct: 287 TIQVNVTVVNVVEFDLKSV-DEIAEEFALESAEEVRNEVRKTLERQVTYRQRQETRRQVL 345
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++ +++PESLV + L++ EM A + + + E Q ++ +
Sbjct: 346 EQMTASADWELPESLVRRQVENALRREMLEMQQAGFSFDEIRARENELRQKSLTTTRQAL 405
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
VL + K +IEV E+ + + + +K+ QK + L A I E
Sbjct: 406 KEHFVLDRVATKESIEVEPYEIDAEIGLMAYQQMETPRKLRARLQKN-GMIENLEAQIRE 464
Query: 419 DKVIDHILKSVQIVDRKVTFDQ 440
K +DHIL D + +
Sbjct: 465 RKAVDHILAHATFEDIPMEISE 486
>gi|256544467|ref|ZP_05471840.1| trigger factor [Anaerococcus vaginalis ATCC 51170]
gi|256399792|gb|EEU13396.1| trigger factor [Anaerococcus vaginalis ATCC 51170]
Length = 445
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 84/434 (19%), Positives = 190/434 (43%), Gaps = 16/434 (3%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-LS 64
K E + D+++ + + N + +S+ + GFR GKVP I+ +YG +
Sbjct: 5 KSHENNIAKFDLVVAAEDFEKAVNNVYKKNKSRYRVDGFRKGKVPKRIIEKMYGVEVFYD 64
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
E I E+ E + + + + +PS+ ++ IE D+ ++ + P
Sbjct: 65 EAIQEVFPEPYNKAIDELNLEVIDQPSVDFDD---------IEKGKDVVFKVEVETKPHP 115
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYTVSVDN 183
+ + +L+VT+ EV +++++ ++ + N E E++ GD V +D+ +D
Sbjct: 116 TLGDYSELEVTEIPTEVTDEDVEHELKHQQEENARIIPIEDGEAQDGDTVNIDFDGFLDG 175
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E +N ++GS + + + G K GD+ ++ FPED+ K+ GK R
Sbjct: 176 ERFEGGKAENHDLVLGSKSFVGDFEKQVEGHKVGDKFDVNVTFPEDYQAKEFQGKDARFE 235
Query: 244 FSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
I + ++++ A FE+ ++ + +K+ E V+ +++ + + +
Sbjct: 236 VEINSISRKELPEIDDEFAKDISEFETLEELKEDTKKNLKEDKEKFVKNQIQNEAIKALV 295
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHMLAKRRV 358
K P+ LV E + +Q + + Q + + D Y +A+ +V
Sbjct: 296 EKSEVSAPDPLVNQEIDLEMQNLDQRLRQMGISLQQYIEMTKMDMSAIRDQYRAVAEDKV 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+V+ + K NIEV++EE+++ + ++ + + + + + +
Sbjct: 356 KANLVMDEVALKENIEVSDEEIENEIKDAAKQYGVDDYEKFKEIFEKNVSRDTVIENVKR 415
Query: 419 DKVIDHILKSVQIV 432
K ++ + K+V++V
Sbjct: 416 RKAVELLEKNVKLV 429
>gi|255027455|ref|ZP_05299441.1| trigger factor [Listeria monocytogenes FSL J2-003]
Length = 394
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 82/402 (20%), Positives = 165/402 (41%), Gaps = 17/402 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG +L I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + P + I E L
Sbjct: 61 EALFQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESM---------EKGETWVLTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV-DYT 178
+ P++++ + L+V + E+ +E++ ++ ++ + VKE + D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V + E+ + ++++LA E+ ++ S+++++ E V Q + +
Sbjct: 232 PVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++ D+P ++V +E + ++ ++ + Q +E
Sbjct: 292 VISKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMEK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGH 394
A++RV +VL I E NIE TEE + + ++
Sbjct: 352 DAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGME 393
>gi|283783344|ref|YP_003374098.1| trigger factor [Gardnerella vaginalis 409-05]
gi|283441664|gb|ADB14130.1| trigger factor [Gardnerella vaginalis 409-05]
Length = 449
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 61/468 (13%), Positives = 174/468 (37%), Gaps = 26/468 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L + E ++I + N+ GFR G VP + G
Sbjct: 1 MKISVRNLEPTKVKLTITADLEDFKPFLEEARKEIAKQINVPGFRKGHVPGKIVDQRVGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + E+ + L ++ R +P + E + LK + +
Sbjct: 61 AAVAGEAVNSAVPELYSKALEEKKIRPMDQPEFDVQE-----VPTSTDADASLKFVATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P +++ F +++ + +V +K++ ++ + + + + GD +D
Sbjct: 116 RRPDFKLNKFKGVEIEVEKPKVSDKDVKERLESLRQRFATLVGVDRPAAKGDYTNIDLEA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D+ +++ +++ V + +GS L E L L G++ E G+K
Sbjct: 176 RIDDEVVD--AQEGVSYEIGSGVLLDGLDEALDSLSAGEETTFEGTLESG----KHKGEK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + V + +++D A F++ ++ + +Q +E + L
Sbjct: 230 AQIKVKVNSVKTQELPELDDDFAQEASEFDTLKDLKADIRKACEQAAEGRQATNARDAFL 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP+ +++ + L+ + + + + ++ A++ +
Sbjct: 290 VKLQEEVEIPVPKGVLDKAVSEHLKGM----------TPDPEKATKKQKDEAQQAAEKEL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + E+ ++ V++ ++ + L ++ + ++ L +
Sbjct: 340 RDQMVLDALAEQMDVTVSQADVTNFLVSVAQQYGMDPNQFINAIVNN-GQLGSAVQEVAR 398
Query: 419 DKVIDHILKSVQIVD--RKVTFDQLFDNSSESSPEKLLDKSSKVETFQ 464
K + +++V+ V + + ++ +
Sbjct: 399 SKGLLAGMRAVKFVSGGEALDLSAFLSEDDDEDESVKAASAAAEVADE 446
>gi|225867862|ref|YP_002743810.1| trigger factor (prolyl isomerase) [Streptococcus equi subsp.
zooepidemicus]
gi|259533656|sp|C0MFQ7|TIG_STRS7 RecName: Full=Trigger factor; Short=TF
gi|225701138|emb|CAW98012.1| trigger factor (prolyl isomerase) [Streptococcus equi subsp.
zooepidemicus]
Length = 427
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 173/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTISQDKIKPALDQAFNKIKKDLNAPGFRKGHMPRPVFNQRFGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++ ++ +++ + +P I + E + L
Sbjct: 61 EVLYEEALNIVLPAAYEGAVAELELDVVAQPKIDVVSM---------EKGQEWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + DL V + EV ++E+D ++ N VKE + GD V +D+
Sbjct: 112 TKPEVKLGDYKDLTVEVEASKEVTDEEVDAKVERERNNLAELVVKEDAAVEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG K GD E+ FPE++ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGAKAGDTVEVNVTFPENYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++LA E+ ++ ++++ E ++
Sbjct: 232 AAKFVTTVHEVKAKEVPELDDELAKDIDEEVETLDELKAKYRKELEASKEAAYDDALEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
++ ++PE +V +E + + + M Q + E+ + +
Sbjct: 292 AIELAVENAEIVELPEEMVHDEVHRSVNEFMASMQRQGISPDMYFQLTGTSQEDLHKQHE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E +++E++ + + +++
Sbjct: 352 AEADKRVKTNLVIEAIAKAEGFEASDDEIEKEINDLAAEYSMPVEQVRSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I S +
Sbjct: 407 LKHDIVMKKAVEVITSSAKAK 427
>gi|166369011|ref|YP_001661284.1| trigger factor [Microcystis aeruginosa NIES-843]
gi|189035944|sp|B0JL93|TIG_MICAN RecName: Full=Trigger factor; Short=TF
gi|166091384|dbj|BAG06092.1| trigger factor [Microcystis aeruginosa NIES-843]
Length = 464
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 75/439 (17%), Positives = 174/439 (39%), Gaps = 17/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+VI++ + L++ IP+ ++ + ++++ NI GFRPGKVP + G
Sbjct: 1 MKVIQEKLPASQIGLEIEIPAETTKNTHEQVVKNLAKSVNIPGFRPGKVPRQILLQRLGT 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
K++ + I+E+I+ + L + + P + + E L +S D
Sbjct: 61 KAVKAAVIEELIENCLESALKQEGIESLGNPQLLSK---FEDLIAAYEPGKALTFSVSLD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVD 176
+ P I + +++L VT + D + ++ E + E V
Sbjct: 118 VAPTIILGDYENLSVTAEETVYDPESVENWFKERQEQLATLVPVEDRGAQLGDVAIVDYR 177
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ + D ++++ + + E ++G+K + KE+ FPED+ +D+A
Sbjct: 178 GKSAETGEDIPDIDGEDLRVDMEAGRFIEGMVEGIIGMKPEEVKEMTLTFPEDYPKEDVA 237
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K V ++KE+ + +++D A E+ + +R ++ ++ +E ++ +
Sbjct: 238 AKAVIFTITMKELKAKELPELDDDFAQEVSDQETIAELRASLEKRFQEQAEKETKESIDD 297
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED--LQYYHML 353
+ + T D+PE+L+E E IL + + + + D +
Sbjct: 298 ALTKELVKGATLDLPETLIEKEVTHILTQSFMQFQQMGLDVNQLFTKDNIPKMRENARPD 357
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + +V+ + + IEV+ E + + + + + M +
Sbjct: 358 AIESLKETLVVQELAKVAGIEVSPEAVAEKIANIMSQLSDRDIDM-------QRLEQVIT 410
Query: 414 APIFEDKVIDHILKSVQIV 432
+ + ++ + + I
Sbjct: 411 EEMLAENTLEWLKEKATIT 429
>gi|229817487|ref|ZP_04447769.1| hypothetical protein BIFANG_02750 [Bifidobacterium angulatum DSM
20098]
gi|229785276|gb|EEP21390.1| hypothetical protein BIFANG_02750 [Bifidobacterium angulatum DSM
20098]
Length = 472
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 66/474 (13%), Positives = 180/474 (37%), Gaps = 26/474 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-K 60
++ + E K +L V + +E ++I + NI GFR G VP ++ +G
Sbjct: 19 KISVRNLEPTKVKLTVTVDQEEFDPYLDEARKNIAKEVNIPGFRKGHVPGKLVEQRFGFG 78
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E ++ + E+ + L ++ R P + + + LK + +
Sbjct: 79 AVAGEAVNGAVPELYSKALEEKKIRPMAEPEFDVVDI-----PESAKDEKKLKFTATVER 133
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ + +++ E+ ++++D+++ + + + + GD +D
Sbjct: 134 RPEFDLPETEGMEIAIAAPEIKDEDVDKRLEALRQRFGTLVSVDRPAAKGDFANIDLNAE 193
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D ++ S++ V + +GS + E L GL G++ E + G+K
Sbjct: 194 IDGESVD--SQEGVSYELGSNTMLDGLDEALDGLSAGEETTFEGTLEAG----EHEGQKA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ + V + ++++ A F++ ++ + Q ++ + + +
Sbjct: 248 QIKVKVNSVKAEELPELDDEFAQEASEFDTLDELKADIRKAAAQDAKGRQATEARDAFIA 307
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ VP+ + N L+ V + + +E ++ +
Sbjct: 308 KLEEGLEIPVPKGVKANMIEQQLKNV----------TADPKKATKEQKAEAEEAVEKELR 357
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+VL + EK +++V++ ++ + L ++ + + L +
Sbjct: 358 DQMVLDALAEKLDVQVSQADVFNFLASIAQQYGMDPNAFIQAIMRN-GQLGSAVQEVARS 416
Query: 420 KVIDHILKSVQIVD--RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + +++V+ V N++E E+ ++ +S E + +
Sbjct: 417 KGLLAGMRAVKFTADGEVVDLSDFLGNAAEEEEEESVEAASAAAAVADELSAKD 470
>gi|168186115|ref|ZP_02620750.1| trigger factor [Clostridium botulinum C str. Eklund]
gi|169295981|gb|EDS78114.1| trigger factor [Clostridium botulinum C str. Eklund]
Length = 432
Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats.
Identities = 79/438 (18%), Positives = 193/438 (44%), Gaps = 17/438 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +L++ + + ++ + + + N+ GFR GK P++ I YG+
Sbjct: 1 MNTKIERVENNVVKLEITVEKEKFNEAIKKAYKKNVKRFNVPGFRKGKAPMNIITRYYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + I+ +E P+ + + + P I I E I D
Sbjct: 61 GVFYEDAINTCCEEAYPKAVEEHKLQPVDYPKIDIVE---------IGSGKDFVFTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDY 177
P+++I ++ ++ ++ V ++++++Q+ + + N + + + D +D+
Sbjct: 112 TRPEVKIDNYKGVEAKKNTYNVTDEDVEKQLNAMLEKNARIITKEEGAAIQKNDIAIIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D E + +G+ + LVGLK G++KEI FPE + ++L G
Sbjct: 172 KGFIDGKPFEGGEATDYSLEIGTGTFIDNFEDQLVGLKVGEEKEINVNFPEQYGREELNG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K + IKE+ ++++ A F++ A++ ++K+++ ++ + + +
Sbjct: 232 KPAKFEVKIKEIKVKELPALDDEFAKEVSEFDTVDALKADLNKKLEEANKNKEKMEYEEA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+++ + N+ ++PE ++E E + +++ + + Q +S + + +Y
Sbjct: 292 VIEEVCNRAEVEIPEVMIEKEIDMMIKDLEMRLGYQGLDLASYYQYTNSSEAKVREYMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+++V T +VL + + NIE TEEE++ + ++ G + L
Sbjct: 352 TAEKKVKTELVLEKVVKDENIEATEEEIKERAKEMAQQYGGGQDADKLVEAIVGAQREVL 411
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ +K ID ++++ +
Sbjct: 412 AKQLANEKAIDFLVENSK 429
>gi|164686706|ref|ZP_02210734.1| hypothetical protein CLOBAR_00301 [Clostridium bartlettii DSM
16795]
gi|164604096|gb|EDQ97561.1| hypothetical protein CLOBAR_00301 [Clostridium bartlettii DSM
16795]
Length = 427
Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats.
Identities = 83/437 (18%), Positives = 185/437 (42%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ EG + I +++ + N+ + + NI GFR GK P I++ YGK
Sbjct: 1 MKAELIKKEGNVVNFKLTIDNDKFEAAINKAYNKNKGRFNIAGFRKGKAPRRIIENNYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ID + E+ P L + RPSI + E D L+
Sbjct: 61 GVFYEDAIDIVFPEVYPSALDELQLAPIDRPSIDVEEISKDNGLVLVVQVEV-------- 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P+ E+ + ++V + V ++E+D ++ E+ + + E E GD +D+
Sbjct: 113 -QPEFELGQYKGIEVAKVDYNVTDEEVDAKLNELQEKASRLVDSDKEIENGDTANIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D+V E + ++GS + L+G K G++ ++ FP D+ ++LAG
Sbjct: 172 FKDDVAFEGGKAEGHNLVIGSGSFIPGFEDQLIGKKAGEEVDVNVTFPADYHAEELAGAP 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V + V +N++ A FE+ + ++ K ++ + + + + ++
Sbjct: 232 VVFKVKVNAVKVKELPELNDEFAQDTTEFETLAELKADLKAKAEEEAAAKAKSEERNAVV 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK----SQNVDSIDEEDLQYYHMLA 354
+ + +VPE++V + + + ++ + + + +E A
Sbjct: 292 EAVVANTEVEVPETMVNAQIDSSIMELNYSLQYQGFSIEQLLEMTGKSMQELRDERKEDA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V +V+ I + N+EV+EEE+++ + + + ++ + + L +++
Sbjct: 352 EKSVKASLVVDAIAKAENVEVSEEEVEAEVAKMAEAYNMTLPQIKEALKSND--LEDIKG 409
Query: 415 PIFEDKVIDHILKSVQI 431
+ K ID ++++ I
Sbjct: 410 QLRIRKTIDFLVENAVI 426
>gi|160933528|ref|ZP_02080916.1| hypothetical protein CLOLEP_02374 [Clostridium leptum DSM 753]
gi|156867405|gb|EDO60777.1| hypothetical protein CLOLEP_02374 [Clostridium leptum DSM 753]
Length = 432
Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats.
Identities = 72/439 (16%), Positives = 175/439 (39%), Gaps = 21/439 (4%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI- 62
+ + + EL+V++ + + K +I GFR GK P + ++ +GK +
Sbjct: 8 SQNKIDTNRVELEVVVDAETFEKGLAAAFKKQSKKISIPGFRKGKAPRAFVEKYFGKEVF 67
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
+ ++ + + + E + + + I G + P
Sbjct: 68 YEDAVNALYPDALDEAVKEAGLEVI-QDKIDF--------DVKEVGPQGFTFTAALTTKP 118
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSV 181
++ I ++ ++ + EV +++ID ++ ++ + N ++ ++ D +D+ +
Sbjct: 119 EVTIENYKGIEAVKKSAEVTDEDIDAEIKKVQERNSRMVTVEDRAAQNDDIAVIDFEGFL 178
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D E +N +GS E +VG TGD+ E+ FPED+ ++L GK
Sbjct: 179 DGEPFEGGKGENYSLTLGSGQFIPGFEEQIVGHNTGDEFEVNVTFPEDYQAEELKGKATT 238
Query: 242 LNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ E+ V+++ F++ + + +K+ + E ++ Q++D
Sbjct: 239 FKCKLHEIKMKELPEVDDEFVKDVSEFDTLADYKEDLKKKLAESKEKEAADDLENQLIDK 298
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLAKR 356
+ ++PE++ EN+ +++ + + S + ++ + + A+R
Sbjct: 299 LVELVQGEIPEAMYENKIADSIREFGYRLQSQGLNLDTYMKYTGMNVDQMKEGFRPQAER 358
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V + L I ++ EE++ + ++ K+ + AEL I
Sbjct: 359 QVKLRLALEKIAALEELKAGEEDLNQEYQKIAEQYKMEADKIKELIPA-----AELEKDI 413
Query: 417 FEDKVIDHILKSVQIVDRK 435
+K I+ + + I D +
Sbjct: 414 CVEKAINLVRDNANIKDAE 432
>gi|300741668|ref|ZP_07071689.1| trigger factor [Rothia dentocariosa M567]
gi|300380853|gb|EFJ77415.1| trigger factor [Rothia dentocariosa M567]
Length = 450
Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats.
Identities = 71/453 (15%), Positives = 170/453 (37%), Gaps = 24/453 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + +++V +P + +++ + N+ GFR GK+P I+ G
Sbjct: 19 KTAVEKLNPTLAKIEVEVPFAEFKSYLDRTYKNLAQQINVPGFRKGKLPKQLIEQRTGYD 78
Query: 62 ILSET-IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E +++ + + + L + + +P + + + + D+KL ++ +
Sbjct: 79 YIVEASLNDALNDFYSQALGENELSPLAQPELDVQSQ-----PTVNDREADVKLNITVTV 133
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ +++ ++V D +V ++ ++ + + + + E + D VT+D T
Sbjct: 134 RPEIELPNYEGIEVEVDEIKVTAEDEEQALEALRERFGTLKNVERPAAKNDFVTIDITAE 193
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ ++ + ++ + +GS + E L+GL G+ E S D AG+
Sbjct: 194 INGQEID--AANDLSYQIGSGTMVDGIDEALMGLSAGEDATFETTL----SGGDHAGEDA 247
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + V V+++ A F++ ++ ++ + + + ++L
Sbjct: 248 TIKVKLSAVKERELPEVDDEFAQLASEFDTVDELKADMKNQVAEAKVSEQGAQARDKVLA 307
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ VPE ++E + N D EE Q +
Sbjct: 308 KLIEMVEVPVPEKVIEEQLEQHF----------NNPEAGEDHDTEEHRQEVRENTETAFK 357
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+VL I + +EV + EM + + ++ + L +
Sbjct: 358 NEMVLDAIADAEEVEVNQNEMINYIITMSSQYGMDPNQFAQMLDGS-GQAGMLVGEVRRS 416
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
K + +LK + D K L SE ++
Sbjct: 417 KALGEVLKKAVVKDTKGKAVDLSKFLSEGEEDE 449
>gi|282898109|ref|ZP_06306104.1| Trigger factor [Raphidiopsis brookii D9]
gi|281197253|gb|EFA72154.1| Trigger factor [Raphidiopsis brookii D9]
Length = 449
Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats.
Identities = 72/439 (16%), Positives = 184/439 (41%), Gaps = 17/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ ++ E + L++ I + + + I+D+ NI GFR GKV + G
Sbjct: 1 MKITQEKLEKSQIGLEIEITQESTREKYEQVIKDLMRNVNIPGFRKGKVSRQILLQRIGA 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + ++E+I E + + + + + +A +P + D G + L + D
Sbjct: 61 NRVKASVLEELIPEAIEQAVKQENIKAIGQPKLV---SSFDDLIGKYKPGETLTFSAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVD 176
+ P+++I + +Q+ + + D ++DR + E + E + V
Sbjct: 118 VEPEVKIKQYTGMQIKAEEVKYDSSQVDRAIEEEREKIATLVPVEGRAAQLGDVALVDFH 177
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
++ D + ++ + +VG+ G+ +EI FP ++ ++L+
Sbjct: 178 GVLTEDPKPIPGAEGEDFSVDLNEDRFIPGFVTGIVGMIPGETREIPAQFPHNYPDEELS 237
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K ++KE+ ++++ A F++ + +R ++ +Q E +
Sbjct: 238 NKAALFTVTLKEIKEKELPELDDNFAEEVSDFKTLAELRASLEKQFQQKVEEKNTENKHN 297
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE--EDLQYYHML 353
+L + D+PE+++E + + L+K F ++ + + + + + +
Sbjct: 298 ALLQELLQHVEIDLPETMIEQQVDHKLEKTAFNLAQQGLDVKRLFTRETVVQLRENIRPS 357
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + + + I ++ +I V +EE+Q + L ++ + + K N + E+
Sbjct: 358 AIEDLKRDLAIREIAKQESITVDKEEVQKKAAEVLQQYSNEDIDV-----KNLNLVLEIE 412
Query: 414 APIFEDKVIDHILKSVQIV 432
+ +KV++ ++ + I
Sbjct: 413 --LEREKVLEWLITNSSIE 429
>gi|33862336|ref|NP_893896.1| trigger factor [Prochlorococcus marinus str. MIT 9313]
gi|41018181|sp|Q7V991|TIG_PROMM RecName: Full=Trigger factor; Short=TF
gi|33640449|emb|CAE20238.1| FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
[Prochlorococcus marinus str. MIT 9313]
Length = 479
Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats.
Identities = 74/476 (15%), Positives = 188/476 (39%), Gaps = 16/476 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
QV + ++V +P+ R ++ + + N+ GFR GKVP + + G
Sbjct: 7 QVKTTQKPNSRLAVEVAVPAERCQANYEAAVTRLSRTTNLPGFRKGKVPRAVLLQQIGPV 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++ ++ + E+L + P + G D + + L L L D+
Sbjct: 67 RIRATALESLVDAVWREVLEQESIEPLCEPEL---SGGFDALLESFQPSEALTLTLETDV 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDY 177
P ++ + LQ ++ D ++D + + K E + V+
Sbjct: 124 TPTPKLKATKGLQAEAEVVTFDPSKVDELIEQSRKQLATLVPVESRPAAIGDIAVVSFSG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T D +E S ++ + + E ++G+ GD+K ++ FP+D+S +D G
Sbjct: 184 TYDDDGSAIEGGSSDSMDVDLEDGQMIPGFVEGIIGMNLGDEKTVDCHFPDDYSKEDARG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K ++KE+ + +++ A + + + +R Q++++ ++ R
Sbjct: 244 RKASFVINLKELKTRELPDLDDAFAQQSSDKATLEELRNDLEQRLQEDAKRRDRSNRHDA 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
+L+ ++ + D+P +LV+ E ++++ + + +++ + + ++ A
Sbjct: 304 LLEALTEQLEVDLPNTLVQQEIRNLVEQTASQFAQQGMDVKSMFTPELVRSLMESSRPEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ R+ L + E ++++ E E+ + + + G +
Sbjct: 364 EERLRRSFALTALAESEDLKIEESEISAKVKEVSRELSGERD------IDPARLRQAVSD 417
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ +DK++D + + I ++ + + + S + + E P+
Sbjct: 418 DLLKDKLLDWLEDNSTITEKVLESEAKTSKPAAKSKGSKTKSTKTKTNKANTEKPA 473
>gi|293401435|ref|ZP_06645578.1| trigger factor [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305073|gb|EFE46319.1| trigger factor [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 425
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 77/438 (17%), Positives = 185/438 (42%), Gaps = 24/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + E EL + + + + + K N+ GFR G P + ++
Sbjct: 1 MSSTWELKEKSTGELTTTVEGDAWKAAQKKAFGKLSKKVNLPGFRKGHAPEALVRKQIST 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++IL E IDE+ E + + + + D RPS+ I+ + D + + +
Sbjct: 61 QNILMEAIDEVAGEALSDGIREHDLWVVSRPSLGIDSIDED----------KVTFKFTVT 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++++ ++ +L + +D V +++++ ++ + + ++ + E GD +D+
Sbjct: 111 VKPEVKLGAYKNLDIKKDDAAVSDEDVEAELTSLQERFADLVIKEDGKVENGDTAVIDFE 170
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E + ++GS E L+G+K+ + KEI FPE++ ++LAG+
Sbjct: 171 GFKDGVAFEGGKAEAYPLVIGSGSFIPGFEEQLLGMKSEETKEINVTFPEEYQAEELAGQ 230
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
V ++ ++ + VN++L + E+ A + + ++ QK +
Sbjct: 231 PVVFKVTVHDIKEKVLPEVNDELIKQAEIKDVETVDAYKEYARKNLETSKANAANQKFEN 290
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYH 351
++L +++ ++P+ +VE E + ++ + + S DE +
Sbjct: 291 ELLTAVTDAAEVEIPDVMVEEETDTLVNEFAQRLQSQGFSLDQFKQVTGQTDEMIREEMG 350
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +V +VL I + +E+++EE++ L + +++ K
Sbjct: 351 KDAYNKVKVRLVLEAIAAEEKMEISDEEVEKELETVATTYNMPLEQVKQLISKD-----A 405
Query: 412 LRAPIFEDKVIDHILKSV 429
+ + K ++ + ++
Sbjct: 406 IAYDLRIRKALELLKETA 423
>gi|124021785|ref|YP_001016092.1| trigger factor [Prochlorococcus marinus str. MIT 9303]
gi|166229916|sp|A2C5R7|TIG_PROM3 RecName: Full=Trigger factor; Short=TF
gi|123962071|gb|ABM76827.1| FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
[Prochlorococcus marinus str. MIT 9303]
Length = 479
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 71/445 (15%), Positives = 181/445 (40%), Gaps = 16/445 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-K 60
QV + L+V +P+ R ++ + + N+ GFR GKVP + + G
Sbjct: 7 QVKTTQKPNSRLALEVAVPAERCQANYEAAVTRLSRTINLPGFRKGKVPRAVLLQQIGLV 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++ ++ + E+L + P + G D + L L L D+
Sbjct: 67 RIRATALETLVDAVWREVLEQESIEPLCEPEL---SGGFDALLESFQPGEALTLILETDV 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDY 177
P ++ + LQ ++ D ++D + + K E + V+
Sbjct: 124 TPTPKLKATKGLQAEAEVVTFDPSKVDELIEQSRKQLATLVPVESRPAAIGDIAVVSFSG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T D +E S +++ + + E ++G+ G +K ++ FP+D+S +D G
Sbjct: 184 TYDDDGSAIEGGSSESMDVDLEDGQMIPGFVEGIIGMSLGSEKTVDCHFPDDYSKEDARG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K ++KE+ + +++ A + + + +R Q++++ ++ R
Sbjct: 244 RKASFVINLKELKTRELPDLDDAFAQQSSDKATLEELRNDLEQRLQEDAKRRDRSNRHDA 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
+L+ ++ + D+P +LV+ E ++++ + + +++ + + ++ A
Sbjct: 304 LLEALTEQLEVDLPNTLVQQEIRNLVEQTASQFAQQGMDVKSMFTPELVRSLMESSRPEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ R+ + L + E ++++ E E+ + + + G +
Sbjct: 364 EERLRRSLALTALAESEDLKIEESEISAKVKEVSRELSGERD------IDPARLRQAVSD 417
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFD 439
+ +DK++D + + I ++ + +
Sbjct: 418 DLLKDKLLDWLEDNSTITEKVLESE 442
>gi|331701125|ref|YP_004398084.1| Trigger factor [Lactobacillus buchneri NRRL B-30929]
gi|329128468|gb|AEB73021.1| Trigger factor [Lactobacillus buchneri NRRL B-30929]
Length = 444
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 83/461 (18%), Positives = 190/461 (41%), Gaps = 26/461 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EL I ++ + + + ++ + GFR GKVP +YG+
Sbjct: 1 MSAKWEKKGTNDGELTFEIGTDSIKSGLDRAFKKNKNSIRVPGFRKGKVPRQIFTKMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + + +P I + E ++ +
Sbjct: 61 EALYEDALNILLPDEYEKAVQDAKIEPVDQPKINVESM---------EKGKPWVIKANVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L V + V +K++D ++ + ++ +KE ++ D V +D+
Sbjct: 112 VKPEVKLGDYKGLSVPKQNTRVYQKDVDAELEKKRESQAELVLKEDKAAEKGDTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D E S +N +GS + L+G K GD+ E++ FP+D+ KDLA K
Sbjct: 172 GSIDGKPFEGGSAENHSLELGSNSFIPGFEDQLIGHKAGDEVEVKVTFPKDYQAKDLANK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ I EV + ++ND A +S ++ + +K + R ++
Sbjct: 232 EAIFKTKIHEVKTKELPKLDNDFAKDVDEDVDSLDELKEKIKEDLKSQKKSEARDAIEDA 291
Query: 297 ILDYI-----SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+ + + ++ + + L ++ + + + Q + E+ + +
Sbjct: 292 AISEATDNAEVKDIPQAMIDEDIQRQMDQYLAGMQQQGINQDMYFQLTGTKPEDLKKQFA 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++RV T +VL I K IE +E+++++ + ++ E + +
Sbjct: 352 DGAEKRVKTNLVLEAIVAKEKIEPSEDDVKAEVKNLAKQYGMKEDAVRSALTED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
L+ I + ID I+ S + + + + +S+E+S EK
Sbjct: 407 LKHDIAIKQAIDMIVDSSKQDAKAKSTE---KDSTEASSEK 444
>gi|237736663|ref|ZP_04567144.1| trigger factor [Fusobacterium mortiferum ATCC 9817]
gi|229420525|gb|EEO35572.1| trigger factor [Fusobacterium mortiferum ATCC 9817]
Length = 428
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 81/439 (18%), Positives = 189/439 (43%), Gaps = 20/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K E+ + + + + +E ++++ K + GFR G VP+S +++ +
Sbjct: 1 MKHELKKVANSAVEIKICLTAEEVKPVKDEVLKELAKKVEVPGFRKGHVPVSTVEAQFKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E D+++ + E++ + I + + + + D+
Sbjct: 61 AVKEEVTDKVLHKYYEEVIKAENIMPISY-----------INNVKANLGEEFDVTFTVDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE--TESEIGDKVTVDYT 178
P++ + + L+V ++ E+ +++D ++ + + E E ++++GD V + +
Sbjct: 110 YPEVTLGEYKGLEVEKETFEMTPEKLDAEITMMVNSKSKLEETEAGYKAQMGDTVDLAFE 169
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E + +GS E LVG + G + E+ FP ++ +LAGK
Sbjct: 170 GFVDGVAFEGGKTDSHVLKLGSKMFIDTFEEQLVGYEAGQEGEVNVTFPAEYHAANLAGK 229
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + +N++LA GFE+ M+ ++IK E V+ + ++L
Sbjct: 230 PAVFKVKVNSIKKLVTPELNDELAKEFGFENVEDMKAKTEERIKAREEDRVKNQYIGKLL 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----A 354
D +S+ T +VP S++ NE + ++ ++++ + + A
Sbjct: 290 DKVSSTSTVEVPVSMIANEVRARIAEMEQQLAAQGIGFDMYMQMTGMNRAKLEAQIAPMA 349
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGH---EKKMLDHFQKYPNALAE 411
+V ++L I + IEV+E+E++ + + + ++ L+ + Y N
Sbjct: 350 AAKVKADLILEAIAKAEGIEVSEDEIKEKMTEIAKMYGMDLAKLEEELNKHKNYDNFKMT 409
Query: 412 LRAPIFEDKVIDHILKSVQ 430
++ K ID I+ + +
Sbjct: 410 VQGECLMQKAIDVIVNNAK 428
>gi|297243352|ref|ZP_06927285.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Gardnerella vaginalis AMD]
gi|296888599|gb|EFH27338.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Gardnerella vaginalis AMD]
Length = 449
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 61/468 (13%), Positives = 174/468 (37%), Gaps = 26/468 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L + E ++I + N+ GFR G VP + G
Sbjct: 1 MKISVRNLEPTKVKLTITADLEDFKPFLEEARKEIAKQINVPGFRKGHVPGKIVDQRVGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + E+ + L ++ R +P + E + LK + +
Sbjct: 61 AAVAGEAVNSAVPELYSKALEEKKIRPMDQPEFDVQE-----VPTSTDADASLKFVATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P +++ F +++ + +V +K++ ++ + + + + GD +D
Sbjct: 116 RRPDFKLNKFKGVEIEVEKPKVSDKDVKERLESLRQRFATLVGVDRPAAKGDYTNIDLEA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D+ +++ +++ V + +GS L E L L G++ E G+K
Sbjct: 176 RIDDEVVD--AQEGVSYEIGSGVLLDGLDEALDSLSAGEETTFEGTLESG----KHKGEK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + V + +++D A F++ ++ + +Q +E + L
Sbjct: 230 AQIKVKVNSVKTQELPELDDDFAQEASEFDTLKELKADIRKACEQAAEGRQATNARDAFL 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP+ +++ + L+ + + + + ++ A++ +
Sbjct: 290 VKLQEEVEIPVPKGVLDKAVSEHLKGM----------TPDPEKATKKQKDEAQQAAEKEL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + E+ ++ V++ ++ + L ++ + ++ L +
Sbjct: 340 RDQMVLDALAEQMDVTVSQADVTNFLVSVAQQYGMDPNQFINAIVNN-GQLGSAVQEVAR 398
Query: 419 DKVIDHILKSVQIVD--RKVTFDQLFDNSSESSPEKLLDKSSKVETFQ 464
K + +++V+ V + + ++ +
Sbjct: 399 SKGLLAGMRAVKFVSGGEALDLSAFLSEDDDEDESVKAASAAAEVADE 446
>gi|125623386|ref|YP_001031869.1| trigger factor [Lactococcus lactis subsp. cremoris MG1363]
gi|166229896|sp|A2RIM8|TIG_LACLM RecName: Full=Trigger factor; Short=TF
gi|124492194|emb|CAL97123.1| trigger factor [Lactococcus lactis subsp. cremoris MG1363]
gi|300070134|gb|ADJ59534.1| trigger factor [Lactococcus lactis subsp. cremoris NZ9000]
Length = 427
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 85/441 (19%), Positives = 181/441 (41%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + K L I + ++ +++ ++ GFR GK+ +YG+
Sbjct: 1 MTVSFEKTSDTKGTLSFSIDQETIKTGLDKAFNKVKANISVPGFRKGKISRQMFNKMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++ ++ + + +P I + +E D +L
Sbjct: 61 EALFEEALNAVLPTAYDAAVKEAAIEPVAQPKIDV---------AKMEKGSDWELTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
+ P I + + DL V D EV ++E++ ++ N VKET +E GD V +D+
Sbjct: 112 VKPTITLGDYKDLTVEVDATKEVTDEEVETRLTNAQNNLAELAVKETAAENGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E N +GS E L+G K G+ E++ FPE++ +DLAGK
Sbjct: 172 GSVDGVEFEGGKGSNHSLELGSGQFIPGFEEQLIGTKAGETVEVKVTFPENYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHS-EFLVRQKVKR 295
+ ++ EV + ++++LA E+ ++ +++++ E
Sbjct: 232 EALFVTTVNEVKAKELPELDDELAKDIDEEVETLEELKAKFRKELEESKSEAYDDAVETA 291
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
I ++N ++PE ++ E + + + M + +++ + Y
Sbjct: 292 AIEAAVANAEIKEIPEEMIHEEVHRAMNEFLGGMQQQGISPEMYFQITGTSEDDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + ++EE+++ + G++ +++ +
Sbjct: 352 ADADKRVRTNLVIEAIAAAESFTTSDEEVKAEIEDLAGQYNMPVEQVEKLLP-----VDM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAMKKAVEVIATTAKVK 427
>gi|327534305|gb|AEA93139.1| trigger factor [Enterococcus faecalis OG1RF]
Length = 434
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 69/438 (15%), Positives = 170/438 (38%), Gaps = 23/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L I + + ++ N+ GFR GKV + +YG+
Sbjct: 8 MSAKWEKKGTNDGVLTFSIEQAVIEKGLTQAFNKVKKNLNVPGFRKGKVSRTVFNRMYGE 67
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P I + D +
Sbjct: 68 EALYEDALNAVLPEAYEAAVLEAGIEPVAQPKIDVESM---------NKGEDWVITAEVT 118
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + +L V++ EV +++++ ++ ++ +KE + D V +D+
Sbjct: 119 VKPEVKLGEYKNLTVSKQDREVTDEDVEARLKREQESQAELVIKEDAAAENGDTVVIDFE 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + E +N +GS + L+G K G++ E+ FPED+ +DLAGK
Sbjct: 179 GFLGDEAFEGGKGENYSLELGSNSFIPGFEDQLIGKKAGEEVEVNVTFPEDYQAEDLAGK 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++ A ES ++ +++ + E + +
Sbjct: 239 EAVFKVTVHEVKAKELPELDDEFAKDVDDSVESLDELKEKFRKELTEAKEAAAEEAKDEE 298
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++P +V +E + + + M + +E+ + +
Sbjct: 299 AIRLAVENAEIVELPHVMVHDEVHRSMDEFLNNMQRQGISPEMYYQLTGSTEEDLHKQFE 358
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + NIEVT+E++ + + ++ E ++
Sbjct: 359 GEAETRTKTNLVIEAVAKAENIEVTQEDIDAEVKDLAEQYNMPEAQVRKVLNND-----M 413
Query: 412 LRAPIFEDKVIDHILKSV 429
L I + ++ I ++
Sbjct: 414 LEHDIRMKRAVETITETA 431
>gi|195978819|ref|YP_002124063.1| trigger factor [Streptococcus equi subsp. zooepidemicus MGCS10565]
gi|238689835|sp|B4U4Y3|TIG_STREM RecName: Full=Trigger factor; Short=TF
gi|195975524|gb|ACG63050.1| cell division trigger factor Tig [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 427
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 173/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTISQDKIKPALDQAFNKIKKDLNAPGFRKGHMPRPVFNQRFGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++ ++ +++ + +P I + E + L
Sbjct: 61 EVLYEEALNIVLPAAYEGAVAELELDVVAQPKIDVVSM---------EKGQEWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + DL V + EV ++E+D ++ N VKE + GD V +D+
Sbjct: 112 TKPEVKLGDYKDLTVEVEASKEVTDEEVDAKVERERNNLAELVVKEEAAVEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG K GD E+ FPE++ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGAKAGDTVEVNVTFPENYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++LA E+ ++ ++++ E ++
Sbjct: 232 AAKFVTTVHEVKAKEVPELDDELAKDIDEEVETLDELKAKYRKELEASKEAAYDDALEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
++ ++PE +V +E + + + M Q + E+ + +
Sbjct: 292 AIELAVENAEIVELPEEMVHDEVHRSVNEFMASMQRQGISPDMYFQLTGTSQEDLHKQHE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E +++E++ + + +++
Sbjct: 352 AEADKRVKTNLVIEAIAKAEGFEASDDEIEKEINDLAAEYSMPVEQVRSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I S +
Sbjct: 407 LKHDIVMKKAVEVITSSAKAK 427
>gi|227517681|ref|ZP_03947730.1| trigger factor [Enterococcus faecalis TX0104]
gi|227554830|ref|ZP_03984877.1| trigger factor protein [Enterococcus faecalis HH22]
gi|229546552|ref|ZP_04435277.1| trigger factor [Enterococcus faecalis TX1322]
gi|229548661|ref|ZP_04437386.1| trigger factor [Enterococcus faecalis ATCC 29200]
gi|293385039|ref|ZP_06630873.1| trigger factor [Enterococcus faecalis R712]
gi|293389309|ref|ZP_06633771.1| trigger factor [Enterococcus faecalis S613]
gi|307269769|ref|ZP_07551099.1| trigger factor [Enterococcus faecalis TX4248]
gi|307272528|ref|ZP_07553781.1| trigger factor [Enterococcus faecalis TX0855]
gi|307274696|ref|ZP_07555868.1| trigger factor [Enterococcus faecalis TX2134]
gi|307284523|ref|ZP_07564685.1| trigger factor [Enterococcus faecalis TX0860]
gi|307289592|ref|ZP_07569536.1| trigger factor [Enterococcus faecalis TX0109]
gi|307296524|ref|ZP_07576346.1| trigger factor [Enterococcus faecalis TX0411]
gi|312900310|ref|ZP_07759622.1| trigger factor [Enterococcus faecalis TX0470]
gi|312904266|ref|ZP_07763428.1| trigger factor [Enterococcus faecalis TX0635]
gi|312906028|ref|ZP_07765041.1| trigger factor [Enterococcus faecalis DAPTO 512]
gi|312909374|ref|ZP_07768230.1| trigger factor [Enterococcus faecalis DAPTO 516]
gi|312953099|ref|ZP_07771949.1| trigger factor [Enterococcus faecalis TX0102]
gi|227074890|gb|EEI12853.1| trigger factor [Enterococcus faecalis TX0104]
gi|227176051|gb|EEI57023.1| trigger factor protein [Enterococcus faecalis HH22]
gi|229306210|gb|EEN72206.1| trigger factor [Enterococcus faecalis ATCC 29200]
gi|229308364|gb|EEN74351.1| trigger factor [Enterococcus faecalis TX1322]
gi|291077717|gb|EFE15081.1| trigger factor [Enterococcus faecalis R712]
gi|291081473|gb|EFE18436.1| trigger factor [Enterococcus faecalis S613]
gi|306495997|gb|EFM65583.1| trigger factor [Enterococcus faecalis TX0411]
gi|306499406|gb|EFM68779.1| trigger factor [Enterococcus faecalis TX0109]
gi|306503200|gb|EFM72454.1| trigger factor [Enterococcus faecalis TX0860]
gi|306508625|gb|EFM77723.1| trigger factor [Enterococcus faecalis TX2134]
gi|306510813|gb|EFM79830.1| trigger factor [Enterococcus faecalis TX0855]
gi|306513879|gb|EFM82481.1| trigger factor [Enterococcus faecalis TX4248]
gi|310628023|gb|EFQ11306.1| trigger factor [Enterococcus faecalis DAPTO 512]
gi|310629008|gb|EFQ12291.1| trigger factor [Enterococcus faecalis TX0102]
gi|310632362|gb|EFQ15645.1| trigger factor [Enterococcus faecalis TX0635]
gi|311290398|gb|EFQ68954.1| trigger factor [Enterococcus faecalis DAPTO 516]
gi|311292671|gb|EFQ71227.1| trigger factor [Enterococcus faecalis TX0470]
gi|315025682|gb|EFT37614.1| trigger factor [Enterococcus faecalis TX2137]
gi|315029043|gb|EFT40975.1| trigger factor [Enterococcus faecalis TX4000]
gi|315031379|gb|EFT43311.1| trigger factor [Enterococcus faecalis TX0017]
gi|315034458|gb|EFT46390.1| trigger factor [Enterococcus faecalis TX0027]
gi|315145323|gb|EFT89339.1| trigger factor [Enterococcus faecalis TX2141]
gi|315146969|gb|EFT90985.1| trigger factor [Enterococcus faecalis TX4244]
gi|315151583|gb|EFT95599.1| trigger factor [Enterococcus faecalis TX0012]
gi|315153989|gb|EFT98005.1| trigger factor [Enterococcus faecalis TX0031]
gi|315156632|gb|EFU00649.1| trigger factor [Enterococcus faecalis TX0043]
gi|315157739|gb|EFU01756.1| trigger factor [Enterococcus faecalis TX0312]
gi|315162030|gb|EFU06047.1| trigger factor [Enterococcus faecalis TX0645]
gi|315164508|gb|EFU08525.1| trigger factor [Enterococcus faecalis TX1302]
gi|315166829|gb|EFU10846.1| trigger factor [Enterococcus faecalis TX1341]
gi|315172159|gb|EFU16176.1| trigger factor [Enterococcus faecalis TX1346]
gi|315575343|gb|EFU87534.1| trigger factor [Enterococcus faecalis TX0309B]
gi|315578707|gb|EFU90898.1| trigger factor [Enterococcus faecalis TX0630]
gi|315581510|gb|EFU93701.1| trigger factor [Enterococcus faecalis TX0309A]
Length = 434
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 70/438 (15%), Positives = 170/438 (38%), Gaps = 23/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L I + + ++ N+ GFR GKV + +YG+
Sbjct: 8 MSAKWEKKGTNDGVLTFSIEQAVIEKGLTQAFNKVKKNLNVPGFRKGKVSRTVFNRMYGE 67
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P I + D +
Sbjct: 68 EALYEDALNAVLPEAYEAAVLEAGIEPVAQPKIDVESM---------NKGEDWVITAEVT 118
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + +L V++ EV +++++ ++ ++ +KE + D V +D+
Sbjct: 119 VKPEVKLGEYKNLTVSKQDREVTDEDVEARLKREQESQAELVIKEDAAAENGDTVVIDFE 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + E +N +GS + LVG K G++ E+ FPED+ +DLAGK
Sbjct: 179 GFLGDEAFEGGKGENYSLELGSNSFIPGFEDQLVGKKAGEEVEVNVTFPEDYQAEDLAGK 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++ A ES ++ +++ + E + +
Sbjct: 239 EAVFKVTVHEVKAKELPELDDEFAKDVDDSVESLDELKEKFRKELTEAKEAAAEEAKDEE 298
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++P +V +E + + + M + +E+ + +
Sbjct: 299 AIRLAVENAEIVELPHVMVHDEVHRSMDEFLNNMQRQGISPEMYYQLTGSTEEDLHKQFE 358
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + NIEVT+E++ + + ++ E ++
Sbjct: 359 GEAETRTKTNLVIEAVAKAENIEVTQEDIDAEVKDLAEQYNMPEAQVRKVLNND-----M 413
Query: 412 LRAPIFEDKVIDHILKSV 429
L I + ++ I ++
Sbjct: 414 LEHDIRMKRAVETITETA 431
>gi|241896579|ref|ZP_04783875.1| cell division trigger factor [Weissella paramesenteroides ATCC
33313]
gi|241870171|gb|EER73922.1| cell division trigger factor [Weissella paramesenteroides ATCC
33313]
Length = 429
Score = 170 bits (431), Expect = 4e-40, Method: Composition-based stats.
Identities = 77/434 (17%), Positives = 178/434 (41%), Gaps = 24/434 (5%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILS 64
EG K + +P + + +++ + ++ GFR GK+P +YG+ +
Sbjct: 7 TKGEGNKGTIKFEVPVDVYAKGIDAAFNEVKKQISVPGFRKGKMPKQVFFQMYGEESLYQ 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
+ +++I+ ++ E +S+ +P I + + L ++ P+I
Sbjct: 67 DALNKILPDVYGEAVSETGAMTVGQPKIE---------AESMNKGETWVLTAEVELAPEI 117
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNV 184
E+ + ++V V + ++D ++A + + + E ++ GD V +D+ SVD V
Sbjct: 118 ELGQYKGVEVPASDTSVSDADVDEELANMQQGQSELVLVEEAAKNGDTVVIDFDGSVDGV 177
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
+ N +GS E LVG K D+ +++ FPED+ DLAGK+
Sbjct: 178 HFDGGQADNYSLELGSGSFIPGFEEQLVGAKAEDKVDVKVTFPEDYQAADLAGKEAVFEV 237
Query: 245 SIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
++ EV + ++++ A E+ + ++ ++ ++ + +
Sbjct: 238 TVHEVKTKEVPALDDEFAKDVDEEVETLAELKEKVKARLADQKASAAKEAKEDAAVAAAV 297
Query: 303 NKYT---FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAK 355
+ ++P S+++ + + + ++ M + +++ + Y A+
Sbjct: 298 DNAKVVGDEIPASMIDEDVHRQMNQMFASMQQQGISPELYYQITGTSEDDLHKQYEEGAE 357
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
RRV T +VL I + +I+ ++EE+ + + + E + + L
Sbjct: 358 RRVKTNLVLEAIVKAEDIKPSDEEIAAEVKSLAEAYNMEEDAVRNALSDD-----MLSHD 412
Query: 416 IFEDKVIDHILKSV 429
I V+D I+
Sbjct: 413 IAIKSVVDLIVAEA 426
>gi|329117013|ref|ZP_08245730.1| trigger factor [Streptococcus parauberis NCFD 2020]
gi|326907418|gb|EGE54332.1| trigger factor [Streptococcus parauberis NCFD 2020]
Length = 427
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 82/441 (18%), Positives = 178/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I ++ + ++ I+ N+ GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTIGQEQIKPALDQAFNKIKKDLNVPGFRKGHMPRPVFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ +++ +P I + E D K+
Sbjct: 61 EVLYEDALNIVLPATYEAAVTELGLEVVAQPKIDVVSM---------EKGQDWKINAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V + EV ++EID ++ KN VKE + GD V +D+
Sbjct: 112 TKPEVKLGDYKNLAVEVEASKEVSDEEIDEKIERERKNLAELVVKEDAAAEGDTVVIDFL 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG+K G+ ++ FPE++ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGVKAGETVDVNVTFPEEYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DAKFVTTVHEVKTKEVPELDDELAKDIDEEVETLDELKAKYRKELEAAKEIAYDDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
++ ++PE +V +E + + + M + +++ + Y
Sbjct: 292 AIELAVENAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYYQLTGTSEDDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E ++EE++ + + +++
Sbjct: 352 SEADKRVKTNLVIEAIAKAEGFEASDEEIEKEINDLATEYNMPVEQVRTLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I +S ++
Sbjct: 407 LKHDIAMKKAVEVITESAKVK 427
>gi|307718290|ref|YP_003873822.1| trigger factor [Spirochaeta thermophila DSM 6192]
gi|306532015|gb|ADN01549.1| trigger factor [Spirochaeta thermophila DSM 6192]
Length = 450
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 75/451 (16%), Positives = 203/451 (45%), Gaps = 16/451 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
+ + L + I + ++E + ++ A I GFR GKVP ++ +G+ +
Sbjct: 7 IQKLDNSAVRLTITIDQHDAQKMYDELLARLQKDAQIPGFRKGKVPTYILEKKFGEGLRY 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
ET + +I+E + E + +E+ ++ + + D+ + YD+ P+
Sbjct: 67 ETAERLIQEGLREAFDQIEEKPLSYSVPSLTS------DFPTDFSKDVTFTVEYDVYPEF 120
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV--DYTVSVD 182
+ + D+ V + + +++I R++ ++ K N K+ + + + +
Sbjct: 121 TLPDYSDITVEEPKVTISKEDIARELEKLRKQNSYVVEKQDGEVKEGDIVTVDYWELDGE 180
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+E+ +++ F VG+ E + L+G K G+ + I + FPED+ ++ GK + +
Sbjct: 181 GNPVEESRREDYVFTVGTRYNLYEFDDDLIGAKKGEVRTITKEFPEDYRFEEFRGKTITV 240
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
IK + ++++ A + +++ ++ +++ + ++ ++RQK Q L
Sbjct: 241 QVEIKAIKEQRLPDLDDEFAQDIDEAYQTLDDLKKAIEERLMEQAKAVIRQKKIDQFLTE 300
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFE----MSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++ + +P S+++ E + Q++ + + + ++ + E+ + + A
Sbjct: 301 LAKRTEIPIPASMLKAEMDASYQQLAQQYRTTVEALDKVLEQDGKTREQIYEEWKPSATE 360
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ +++ + E+ IEV+++E+++ + ++ ++ + L ++R +
Sbjct: 361 ALKKRLIITRLIEERKIEVSDDELETFFKEVAEGAGASADQVKAYYAQ-MGQLEQIRYDL 419
Query: 417 FEDKVIDHILKSVQIVDR-KVTFDQLFDNSS 446
E K+ D +L+ +++ KV F L +
Sbjct: 420 KERKLFDQLLEEIKVKKGPKVPFVDLVGANE 450
>gi|315185393|gb|EFU19165.1| trigger factor [Spirochaeta thermophila DSM 6578]
Length = 450
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 76/451 (16%), Positives = 204/451 (45%), Gaps = 16/451 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
+ + L + I + ++E + ++ A I GFR GKVP ++ +G+ +
Sbjct: 7 IQKLDNSAVRLTITIDQHDAQKMYDELLARLQKDAQIPGFRKGKVPTYILEKKFGEGLRY 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
ET + +I+E + E + DE+ ++ + + D+ + YD+ P+
Sbjct: 67 ETAERLIQEGLREAFDQIDEKPLAYSVPSLTT------DFPTDFSKDVTFTVEYDVYPEF 120
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV--DYTVSVD 182
+ + D+ V + + +++I+R++ ++ K N K+ + + + +
Sbjct: 121 TLPDYSDITVEEPKVTISKEDIERELEKLRKQNSYVVEKQDGEVKEGDIVTVDYWELDGE 180
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+E+ +++ F VG+ E + L+G K G+ + I + FPED+ ++ GK + +
Sbjct: 181 GNPVEESRREDYVFTVGTRYNLYEFDDDLIGAKKGEVRTITKEFPEDYRFEEFRGKTITV 240
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
IK + ++++ A + +++ ++ +++ + ++ ++RQK Q L
Sbjct: 241 QVEIKAIKEQRLPDLDDEFAQDIDEAYQTLDDLKKAIEERLMEQAKAVIRQKKIDQFLTE 300
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFE----MSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++ + +P S+++ E + Q++ + + + ++ + E+ + + A
Sbjct: 301 LAKRTEIPIPASMLKAEMDASYQQLAQQYRTTVEALDKVLEQDGKTREQIYEEWKPSATE 360
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ +++ + E+ IEV+++E+++ + ++ ++ + L ++R +
Sbjct: 361 ALKKRLIITRLIEERKIEVSDDELETFFKEVAEGAGASADQVKAYYAQ-MGQLEQIRYDL 419
Query: 417 FEDKVIDHILKSVQIVDR-KVTFDQLFDNSS 446
E K+ D +L+ +++ KV F L +
Sbjct: 420 KERKLFDQLLEEIKVKKGPKVPFVDLVGANE 450
>gi|291165523|gb|EFE27573.1| trigger factor [Filifactor alocis ATCC 35896]
Length = 426
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 82/431 (19%), Positives = 178/431 (41%), Gaps = 17/431 (3%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-LSE 65
E L + + + + + R++ I GFR GK P ++S YG+ + E
Sbjct: 6 KKEKSLVTLKMTVKGEDFAKAIDTVFKKNRTRFAIPGFRKGKAPRKIVESYYGEGVFYEE 65
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
++E+ I E + + RP I G I+ D + + + P++
Sbjct: 66 ALNEVFPVIFTEAIKDHELDVVSRPEIE--------ELGEIQSGEDFDVTVQVYVRPEVT 117
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSVDNV 184
+ + +LQV ++ EV ++E+++ + + N ++ ++ GD V +D+ VD V
Sbjct: 118 LGEYKELQVEKEEVEVTDEEVNQDLEIKREQNARMVAIEDRPAKDGDTVVIDFQGKVDGV 177
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
+ + ++GS +VG+ + K+I FPE + +DL GK
Sbjct: 178 AFDGGKGEGYTLVLGSNSFIEGFEAQIVGMNLEEVKDINVTFPEQYHSEDLQGKDAVFTV 237
Query: 245 SIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
+ E+ +++D + FE+ ++ K+ + + + I+D
Sbjct: 238 KLHEIKEKELPELDDDFVMDISEFETLEELKADIRAKLYETKKAGAETAYRNAIIDKAVE 297
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAKRRVL 359
T +VP+ ++ENE + + + + ++ + A+R+V
Sbjct: 298 ASTVEVPDVMIENEVESMAHEFGQNLQYQGLQLEDYFKYTKSNMMDLKGQMRPDAERKVR 357
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+VL I + NIEV++E+++ + ++ +K+ + + + L+ I
Sbjct: 358 NSLVLDEISKAENIEVSDEDLEKEYTKMAEQYKMEVEKVKELVGRTD--VEVLKDNIRIQ 415
Query: 420 KVIDHILKSVQ 430
K ID ++ S +
Sbjct: 416 KTIDLLIASAK 426
>gi|118444921|ref|YP_878864.1| trigger factor [Clostridium novyi NT]
gi|166229039|sp|A0Q2L2|TIG_CLONN RecName: Full=Trigger factor; Short=TF
gi|118135377|gb|ABK62421.1| trigger factor [Clostridium novyi NT]
Length = 432
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 80/438 (18%), Positives = 191/438 (43%), Gaps = 17/438 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +L++ + + ++ + + + N+ GFR GK P++ I YG+
Sbjct: 1 MNTKIERVENNVVKLEITVEKEKFNEAIKKAYKKNVKRFNVPGFRKGKAPMNIITRYYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + I+ +E P + + + + P I I E I D
Sbjct: 61 GVFYEDAINTCCEEAYPMAVEEHNLQPVDYPKIDIVE---------IGSGKDFVFTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDY 177
P++++ ++ ++ ++ EV ++++++Q+ + + N + + + D +D+
Sbjct: 112 TRPEVKLENYKGVEAKKNTYEVTDEDVEKQLNAMLEKNARIITKEEGAAVQKNDIAIIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD E + +G+ + LVGLK G++KE+ FPE + ++L G
Sbjct: 172 KGFVDGKAFEGGEATDYSLEIGTGTFIDNFEDQLVGLKVGEEKEVNVNFPEQYGREELNG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K + IKE+ ++++ A F++ A++ K+++ ++ + + +
Sbjct: 232 KPAKFEVKIKEIKVKELPALDDEFAKEVSEFDTVDALKADLKTKLEEANKNREKVEYEEA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+++ + N+ ++PE ++E E + +L+ + + Q +S + + +Y
Sbjct: 292 VIEEVCNRAEVEIPEVMIEKEIDMMLKDLEMRLGYQGLDLASYYQYTNSSEAKVREYMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+++V T +VL I + IE TEEE++ + ++ G + L
Sbjct: 352 TAEKKVKTELVLEKIVKDEKIEATEEEIKERAKEMAQQYGGGQDADKLVEAIVGAQREVL 411
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ +K ID ++++ +
Sbjct: 412 ARQLANEKAIDFLVENSK 429
>gi|257869241|ref|ZP_05648894.1| trigger factor [Enterococcus gallinarum EG2]
gi|257803405|gb|EEV32227.1| trigger factor [Enterococcus gallinarum EG2]
Length = 427
Score = 170 bits (430), Expect = 5e-40, Method: Composition-based stats.
Identities = 73/439 (16%), Positives = 169/439 (38%), Gaps = 23/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L I + ++ N+ GFR GKV +YG+
Sbjct: 1 MTAKWEKTGTNDGVLTFSIEQAEIQKGLTTAFNKVKGNLNVPGFRKGKVSRQVFNRMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P I ++ E D ++
Sbjct: 61 EALYEDALNAVLPEAYEAAVKEAGIDPVSQPKIDVDSM---------EKGQDWVIKAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++++ + +L V + EV E+++D ++ + ++ +E GD V +D+
Sbjct: 112 VKPEVKLGDYKELTVEKQDREVTEEDVDARIKREQEAQAELVIKEDEAAENGDTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ E +N +GS + LVG+K G+ KE+ FPED+ +DLAGK
Sbjct: 172 GFLGEETFEGGKGENYSLELGSNSFIPGFEDQLVGVKAGESKEVNVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ EV + ++++ A E+ + ++ +++ + E
Sbjct: 232 DAVFKVTVHEVKAKELPELDDEFAKDVDDSVETLAELKEKYRKELTETKEKAAEDAKDEA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++P S+V +E + + + M + + + Q +
Sbjct: 292 AIRQAVENAEIVELPHSMVHDEVHRSMDEFLNNMQRQGISPEMYYQLTGSTEADLHQQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ RV T +V+ I + +E TEE+++ + + + ++ +
Sbjct: 352 GEAETRVKTNLVIEAIAKAEGLEATEEDIEKEIQELSEAYNMPVDQIKRVLTED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQ 430
L+ I K ++ + + +
Sbjct: 407 LKHDITMKKAVEIVTGTAK 425
>gi|225871223|ref|YP_002747170.1| trigger factor (prolyl isomerase) [Streptococcus equi subsp. equi
4047]
gi|254789021|sp|C0M8K8|TIG_STRE4 RecName: Full=Trigger factor; Short=TF
gi|225700627|emb|CAW95175.1| trigger factor (prolyl isomerase) [Streptococcus equi subsp. equi
4047]
Length = 427
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 173/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTISQDKIKPALDQAFNKIKKDLNAPGFRKGHMPRPVFDQRFGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++ ++ +++ + +P I + E + L
Sbjct: 61 EVLYEEALNIVLPAAYEGAVAELELDVVAQPKIDVVSM---------EKCQEWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + DL V + EV ++E+D ++ N VKE + GD V +D+
Sbjct: 112 TKPEVKLGDYKDLTVEVEASKEVTDEEVDAKVERERNNLAELVVKEEAAVEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG K GD E+ FPE++ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGAKAGDTVEVNVTFPENYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++LA E+ ++ ++++ E ++
Sbjct: 232 AAKFVATVHEVKAKEVPELDDELAKDIDEEVETLDELKAKYRKELEASKEAAYDDALEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
++ ++PE +V +E + + + M Q + E+ + +
Sbjct: 292 AIELAVENAEIVELPEEMVHDEVHRSVNEFMASMQRQGISPDMYFQLTGTSQEDLHKQHE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E +++E++ + + +++
Sbjct: 352 AEADKRVKTNLVIEAIAKAEGFEASDDEIEKEINDLAAEYSMPVEQVRSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I S +
Sbjct: 407 LKHDIVMKKAVEVITSSAKAK 427
>gi|269215647|ref|ZP_06159501.1| trigger factor [Slackia exigua ATCC 700122]
gi|269131134|gb|EEZ62209.1| trigger factor [Slackia exigua ATCC 700122]
Length = 555
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 72/447 (16%), Positives = 164/447 (36%), Gaps = 24/447 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ E + +L V I ++ + ++ +D ++ GFR G VP I + G+
Sbjct: 21 NTKVEVLESGETKLTVTIDADDIKRRIAKKYKDFGNQYRFPGFRKGHVPRPVIDANLGRE 80
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E ++++ E P + + D PS S + D ++ +
Sbjct: 81 AVRNEVTNDLLNETYPIAIDEADLCYFGEPSF-------GEVSEFVVEGQDFTYDMTLSV 133
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P E+SS+D + + E EKEID Q+ + + +E ++ I + ++D T+
Sbjct: 134 KPVFELSSYDPVSIEIPFKEATEKEIDDQLEALRQGYYDYEDAADDAAIEEGGSLDMTMK 193
Query: 181 VDNVILEDQS---KKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH----SIK 233
V N E+ + + + +G + L+G K GD + E+ +
Sbjct: 194 VMNEAGEELTTLAAEKRLYELGRGLYPKALDDALIGKKKGDHVSLTLEVAENPCMMSRLI 253
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQK 292
+ K+ + V + + V ++ +RG +I + ++ +
Sbjct: 254 EKNAKQATFEVDVDCVKTKVVPEVTDEWVSGHFGMSDVPELRGALKTEIDKQKSQVIPRI 313
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQ 348
++ L + + + PE ++ + + + + Q N + +
Sbjct: 314 LETNALFELGGRLEGEAPEGMIAEATDDLYRTFWDSLQRNGVTFDQYLANNGLTVDAFRE 373
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
AK V+ + L I VT++E++ + + + K
Sbjct: 374 DVKKQAKDTVVQNLALDAYARHAGISVTDDEVRDEF----KNSGQEDFEAMYADFKKHGR 429
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRK 435
L +R I K ++ I+ ++ + +
Sbjct: 430 LHIVREGILRGKALEEIVNGAKVTEVE 456
>gi|237742959|ref|ZP_04573440.1| trigger factor [Fusobacterium sp. 4_1_13]
gi|229430607|gb|EEO40819.1| trigger factor [Fusobacterium sp. 4_1_13]
Length = 459
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 89/440 (20%), Positives = 180/440 (40%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E E+ + + + + ++ + + A + GFR G VP + + Y
Sbjct: 1 MNYEVKKLEKSAVEVKLHLTAEEVKPIVDKVLTHVGEHAEVAGFRKGHVPKEALMANYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I S+ ++ I PEI+ K + I DL L D+
Sbjct: 61 HIESDVANDAINANFPEIVDKEKLEPVSY-----------VRLKEINLKDDLNLTFDIDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE---TESEIGDKVTVDY 177
PQ E+ ++ L+ + E+ + ++ ++ + +N+ E E + ++ D V + +
Sbjct: 110 YPQFELGNYKGLEAEKKSFEMTDDLLNEELEIMVRNHAKLEEVEDAGYKVQLDDTVDLAF 169
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D V ++ +GS E LVG G + EI FP+++ +LAG
Sbjct: 170 EGFMDGVPFPGGKAESHLLKLGSKSFIDNFEEQLVGYTKGQEGEITVKFPDEYHAPELAG 229
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
K + I + +N++ A LG+ S ++ ++I + + + +
Sbjct: 230 KPAQFKVKINAIKKLKQPELNDEFAKELGYASLDELKAKTKEEIIKRENDRIENEYVSAL 289
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
LD + T DVP S+V+ E L+++ +++S K + + E
Sbjct: 290 LDKLMETTTIDVPVSMVQAEIQNRLKELEYQLSMQGFKMDDYLKMMGGNVETFAAQLAPA 349
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LA 410
A+++V ++L I ++NN E T+EE+ + + + + + +K N A
Sbjct: 350 AEKKVKVDLILDRIAKENNFEATDEELSKRMEEVAKMYGMDVPVLEEELKKNKNLENFKA 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++ I K ID ++K +
Sbjct: 410 SVKYDIVMKKAIDEVVKESK 429
>gi|160893841|ref|ZP_02074624.1| hypothetical protein CLOL250_01395 [Clostridium sp. L2-50]
gi|156864493|gb|EDO57924.1| hypothetical protein CLOL250_01395 [Clostridium sp. L2-50]
Length = 428
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 84/405 (20%), Positives = 174/405 (42%), Gaps = 16/405 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E +L + +P+ + + K N+ GFR G VP + I+ +YG
Sbjct: 1 MSLAVENLEHSMAKLTITVPAEEFGKAMTTAYNKQKGKFNVPGFRKGHVPQAFIEKMYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E + +I E P+ +S D RP I + + IE D
Sbjct: 61 AVFYEEAANSLINEYYPKEVSASDVDVVSRPVIDVTQ---------IEKGKDFIFTAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P++E+ + L+V + EV + E+ ++ ++ K N + + +++ D+VT+D+
Sbjct: 112 VKPEVELGDYKGLEVEKADVEVTDDEVMAELLKVQKENSRYNPVTDRAAQMDDEVTLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V E +N + ++GS + LVG + E+ FPED+ +DLAGK
Sbjct: 172 GSVDGVPFEGGKAENYKLVLGSHSFIDTFEDQLVGKNIDEDVEVNVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
IKE+ + ++++ A FE+ + K + + + + ++
Sbjct: 232 PAVFKCKIKEIKAVELPELDDEFASEVSDFETLDEYKEDIKSKAAEKKQKDAENEKENKL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHML 353
++ + DV ++ V + I + + + +E ++
Sbjct: 292 IEKVIENAKMDVADAQVADVQERIKDEFAQNLQYQGINLEQYMQICNITEEALMERIKPD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKM 398
A++R+ + +VL I NIEV+++E+ L ++ + + +
Sbjct: 352 AEKRIKSRLVLEAIAAAENIEVSDDEVHEELEAMAKQYQMNVEDI 396
>gi|307151650|ref|YP_003887034.1| trigger factor [Cyanothece sp. PCC 7822]
gi|306981878|gb|ADN13759.1| trigger factor [Cyanothece sp. PCC 7822]
Length = 476
Score = 170 bits (429), Expect = 5e-40, Method: Composition-based stats.
Identities = 76/475 (16%), Positives = 179/475 (37%), Gaps = 33/475 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + L++ IP ++ + ++ I GFR GK+P + G
Sbjct: 1 MKVTQEKLPDSQIGLEIEIPPETSKQTYETVVNNLARTTQIPGFRKGKIPRQVLVQRLGS 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + ++EII+ + E + + + + S D
Sbjct: 61 LRIKATALEEIIQSSLQEAIKQESIEVIGNYQL---GSSFEELLQKFNPGETFTFSASVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI------GDKV 173
+ P +++ + +LQ+ + D ++ID + + + V E D
Sbjct: 118 VPPTVQLGDYQNLQIKAEESVYDPQKIDEWLEQQREKFVTLVPIEDRPAQIGDVAIIDYY 177
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+ + + + +G S E +VG+K + KEI FPED+ +
Sbjct: 178 ALANDGPQAGEAIPGVQGTDFRVELGEGRFISGFVEGIVGMKPDETKEINATFPEDYPQE 237
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAV------RLGFESESAMRGLCSQKIKQHSEF 287
+LAGK+ ++KE+ + ++++LA FE+ + R ++ + ++
Sbjct: 238 ELAGKEAIFTVTLKELKTKELPELDDELAEQISENSEQKFETLAEWREYLEKQFSEQAQN 297
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE--E 345
+ + +I++ + N T D+PE+L++ E +L++ +M + + + +
Sbjct: 298 ETKNSIHSRIIEELVNISTVDLPETLIQEEITELLRQTAVQMQQMGVDVKTLFTSENIGR 357
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
A R+ +VL + + +IEV + ++ + + G + +
Sbjct: 358 MRDNARPEAVERLKQTLVLTEVAKVESIEVDNQAIEERYNKLKQQLQGQDIDL------- 410
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKV 460
+ + K ++ + + + +L S+ E +D+
Sbjct: 411 DRLREVIIQELQTQKTLEWLQEKATV--------ELVPKSTPQEEETEIDQGEDT 457
>gi|332708810|ref|ZP_08428781.1| trigger factor [Lyngbya majuscula 3L]
gi|332352352|gb|EGJ31921.1| trigger factor [Lyngbya majuscula 3L]
Length = 478
Score = 170 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 75/445 (16%), Positives = 180/445 (40%), Gaps = 24/445 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+V ++ + L + IP+ ++ + ++++ I GFR GKVP + G
Sbjct: 1 MKVTQEKLPASQVGLKIEIPAETTKQAYEKVLQNLSRTVKIPGFRQGKVPRQVLLQRLGA 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + I+E++ + + + + A ++T + + L S D
Sbjct: 61 QQVKAAAIEELLDSSLKQAIEQAQIEALGNYNLTST---LEDLLSQFKPGEPLTFTASVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P + + ++ L VT + +V+ ++ + E E+ V V V
Sbjct: 118 VPPLVNLGEYNGLSVTAEETKVEPDAVENFLEERRVEQATLVPVESRPAQMGDVVVVDYV 177
Query: 180 --------SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
+ ++ + K+ + +G + + +VG+ KE+ FPED+
Sbjct: 178 GRFTGDSEEDEGSVIPNGEAKDFEIELGEGKFLEDILQGIVGMNPDQNKEVPVTFPEDYP 237
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVR 290
++DLAGK + ++KE+ +++D A E+ + +R Q+ ++ ++ +
Sbjct: 238 LEDLAGKSSVFSITLKEIKEKELPELDDDFAQEVSDQETLAELREYLQQEFQEKADQETQ 297
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED--LQ 348
+ +++ + K ++PE+L++ E IL + +M + + + + +
Sbjct: 298 ASKEEALINALLEKVEVELPETLIDQELQTILTQTAIQMQQLGMDVKRLFTEENLPQLRE 357
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
A + + + L I + ++ V E E+++ + + G E P+
Sbjct: 358 RSRPDAIQSLRQSLALKEIATRESLTVEESEIEAKSKELMKELAGQEV--------DPDR 409
Query: 409 LAE-LRAPIFEDKVIDHILKSVQIV 432
L E + + + + K I + I
Sbjct: 410 LREFVESDLLKLKAIKWLEDHGTIE 434
>gi|313897638|ref|ZP_07831180.1| trigger factor [Clostridium sp. HGF2]
gi|312957590|gb|EFR39216.1| trigger factor [Clostridium sp. HGF2]
Length = 425
Score = 170 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 76/436 (17%), Positives = 181/436 (41%), Gaps = 24/436 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E EL + + D+ + + K N+ GFRPG+ P ++
Sbjct: 1 MSSTWELKEKSTGELTATVEGDTWKDAQKKAFRKLVKKVNLPGFRPGQAPEKLVRKQISS 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E IDE+ + + + + D RP++ I + D + + +
Sbjct: 61 QNILMEAIDEVAGDALSAGIKEHDLWVISRPALDIESIDED----------KVTFKFNVT 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ ++ L +T++ EV + +++ ++ + + +E + E GD +D+
Sbjct: 111 VKPEVKLGAYKGLDITKEAVEVSDADVEEEITRLQERFADLVVKEEGKVENGDTAVIDFE 170
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ V E + ++GS E ++G+ + K+I FPED+ ++LAG+
Sbjct: 171 GFKEGVAFEGGKGEAYPLVIGSGSFIPGFEEQVLGMGIEETKDINVTFPEDYQAEELAGQ 230
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
V ++ E+ S + +++L + E+ A + + +++ + QK +
Sbjct: 231 PVVFKVTVHEIKSKVLPEADDELVKQAEIENVETLEAFKEYSRKNLEESKKNQAEQKFEN 290
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYH 351
+IL ++ ++P+ ++E E + +++ + S + DE +
Sbjct: 291 EILTAVTENAEVEIPQVMIEEETDSLVRDFEQRLQSQGFGLEQFKQVTGQTDEMIREEMG 350
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +V +VL I + IE++EE++ + L + +++
Sbjct: 351 KDAFNKVKVRLVLEAIAAEEKIEISEEDVNNELENIANMYQMPVEQVKQLISND-----A 405
Query: 412 LRAPIFEDKVIDHILK 427
+ + K ++ + +
Sbjct: 406 VSYDLRIRKALELVKE 421
>gi|319788750|ref|YP_004090065.1| trigger factor [Ruminococcus albus 7]
gi|315450617|gb|ADU24179.1| trigger factor [Ruminococcus albus 7]
Length = 426
Score = 170 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 86/440 (19%), Positives = 189/440 (42%), Gaps = 22/440 (5%)
Query: 1 MQVIEKFSEGLK-RELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M + + G EL++ IP+ D+ + + + GFR GK P I+ YG
Sbjct: 1 MSLKATNNVGTNSYELEIEIPAKDFEDALQKAYLRAKKNIALPGFRKGKAPRKLIEKTYG 60
Query: 60 KSI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + + I+ + +V + + +P I + E I +KL+
Sbjct: 61 EEVFYEDAINLLYAPVVNGAIDESKLDLVCQPEIEVTE---------INKENGVKLKAKC 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNN-VAFEVKETESEIGDKVTVDY 177
P++E+ + ++V + + V +++I +++ E+ + N V + +E GD V +D+
Sbjct: 112 TTRPEVEVKDYKGIEVEKVVNAVTDEDIQKKLDELREKNVRIITVDDRAAETGDTVKIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
D V + ++ +GS + +VG TG++ EI FPE++ +KDLAG
Sbjct: 172 EGFKDGVAFDGGKAEDFDLELGSGQFIPGFEDQIVGHSTGEEFEINVTFPEEYQVKDLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K + +++D+ F++ + K+++ +E KV+
Sbjct: 232 APAVFKINLKSISKKELPELDDDMVKDSTDFDTVDEYKADVKAKLEEAAEKAADTKVEGD 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+ D + T ++P+ + +N N ++ ++ M+S Q + + Y
Sbjct: 292 LFDKVVENMTAEIPDVMYDNRVNEMVAELEQRMASQGISLDMYMQFTGQNIDTIKKGYAE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+++V + L + E NIEVT++++++ + + +++ + +L
Sbjct: 352 QAEKQVKLRLALEKVAEVENIEVTDDDIENEFKKLAETYNMEVEQVKSYV-----RAEDL 406
Query: 413 RAPIFEDKVIDHILKSVQIV 432
+ + K +D I S I
Sbjct: 407 KKDLAVGKAVDIIKDSAVIK 426
>gi|324996090|gb|EGC28001.1| trigger factor [Streptococcus sanguinis SK678]
Length = 427
Score = 170 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + + ++ + GFR G +P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFKSVKKDIAVPGFRKGHLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYNDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P +V E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMVHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASAEEIEAEVTSLATDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|302379685|ref|ZP_07268170.1| trigger factor [Finegoldia magna ACS-171-V-Col3]
gi|302312592|gb|EFK94588.1| trigger factor [Finegoldia magna ACS-171-V-Col3]
Length = 440
Score = 170 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 82/447 (18%), Positives = 194/447 (43%), Gaps = 16/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E + IP+ ++ E + RS+ ++KGFR GKVP ++ YG+
Sbjct: 1 MSAVLVSKENNQAVFTCEIPAEDFNNAIEESYKKNRSRFSLKGFRKGKVPRKMLERAYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ I + + + + +P I +++ I D+K++ + D
Sbjct: 61 GLFYEDAVNLLLPGIYEKAIEELELEPVSQPDIDLDD---------ITENNDVKVKFTVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P+ E+ + L + +V + ++D ++ ++N EV+ E++ D V++++
Sbjct: 112 LKPEFELGDYSKLSAEIEEFKVTDSDVDMKVNHELESNARVQEVEGREAKENDTVSINFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD+ + ++ + ++GS E +VG GD+ ++ FPED+ L GK
Sbjct: 172 GFVDDKAFDGGEAEDYELVLGSHTFIPGFEEQIVGHNVGDEFDVNVKFPEDYHEDSLKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ I + + ++++ F++ + + +++ +E + + +
Sbjct: 232 DAKFECKINSIKEKVLPELDDEFVKDVSEFDTLDEYKKDIKEHLEKDNEQRQLVEKQNKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ + VPES+++NE N Q + Q Q ++ +E+
Sbjct: 292 VEALIEATEISVPESMIDNEVNRQFQDFARRVQQMGLNTDQYFQITNTSEEDVKNELRAN 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ +V +VL EK IE T+EE+ L + + +++ K + L+
Sbjct: 352 AELKVKGDLVLEKYIEKEAIESTDEELDEQLKEFAKVYGKDDEEKFIEEFKNSPNVEFLK 411
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQ 440
I K ++ ++++ + +K +
Sbjct: 412 EDIKRKKALEKLVENTKFEIKKAEEKE 438
>gi|218283664|ref|ZP_03489625.1| hypothetical protein EUBIFOR_02219 [Eubacterium biforme DSM 3989]
gi|218215653|gb|EEC89191.1| hypothetical protein EUBIFOR_02219 [Eubacterium biforme DSM 3989]
Length = 425
Score = 170 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 82/440 (18%), Positives = 183/440 (41%), Gaps = 25/440 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLY-G 59
M E EL+V + + + + +S N+KGFR G++P + +K
Sbjct: 1 MTSTWTLKENSTGELEVTVEGEAWKKAQKKALNYAKSHMNLKGFRQGQIPDALVKKQLSS 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
K++ +E+ E + E + + + RP++ + E L +
Sbjct: 61 KALYDMASEEVANEALSEGIKEHNIELVARPTLDVKE----------ADDEKAVLVFTCT 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
+LP++ + + L + + EV E++++ ++ + + + +++GD+V +D+
Sbjct: 111 VLPEVTLGEYKGLDIKKADVEVTEEDVENEVKRVQDRYADWVVREDDDAAQLGDQVVIDF 170
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ D V E S +N +GS E LVG+K G++K++E FPE++ +LAG
Sbjct: 171 VGTKDGVAFEGGSGENYPLELGSGSFIPGFEEQLVGVKKGEEKDVEVTFPENYQAAELAG 230
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
+ + ++ EV +N++L + E+ A + + E +
Sbjct: 231 QPATFHCTVHEVKYKDLPELNDELIKKLKIENVETVDAYKEKVKTDLTAQKEREAEENFT 290
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYY 350
++L + + ++P ++++ E + + ++ M + + +E
Sbjct: 291 NELLGKVCDNANVEIPAAMIDAEVDRMYREFEGRMQQSGFTAKQFLEATHQTEEAIRAQM 350
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A RV T +VL I + +IE ++E+++ + +K+
Sbjct: 351 SPEAAARVKTQLVLEAIVKAESIEASDEDVEKEFTTMSEMYNMEVEKIKSLISP-----E 405
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++A + K +D I SV+
Sbjct: 406 SIKADLANQKALDFIKTSVK 425
>gi|169824906|ref|YP_001692517.1| FKBP-type peptidyl-prolyl cis-transisomerase [Finegoldia magna ATCC
29328]
gi|238687761|sp|B0S2N7|TIG_FINM2 RecName: Full=Trigger factor; Short=TF
gi|167831711|dbj|BAG08627.1| FKBP-type peptidyl-prolyl cis-transisomerase [Finegoldia magna ATCC
29328]
Length = 440
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 82/447 (18%), Positives = 194/447 (43%), Gaps = 16/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E + IP+ ++ E + RS+ ++KGFR GKVP ++ YG+
Sbjct: 1 MSAVLVSKENNQAVFTCEIPAEDFNNAIEESYKKNRSRFSLKGFRKGKVPRKMLERAYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ I + + + + +P I +++ I D+K++ + D
Sbjct: 61 GLFYEDAVNLLLPGIYEKAIEELELEPVSQPDIDLDD---------ITENNDVKVKFTVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P+ E+ + L + +V + ++D ++ ++N EV+ E++ D V++++
Sbjct: 112 LKPEFELGDYSKLSAEIEEFKVTDSDVDMKVNHELESNARVQEVEGREAKENDTVSINFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD+ + ++ + ++GS E +VG GD+ ++ FPED+ L GK
Sbjct: 172 GFVDDKAFDGGEAEDYELVLGSHTFIPGFEEQIVGHNAGDEFDVNVKFPEDYHEDSLKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ I + + ++++ F++ + + +++ +E + + +
Sbjct: 232 DAKFECKINSIKEKVLPELDDEFVKDVSEFDTLDEYKKDIKEHLEKDNEQRQLVEKQNKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ + VPES+++NE N Q + Q Q ++ +E+
Sbjct: 292 VEALIEATEISVPESMIDNEVNRQFQDFARRVQQMGLNTDQYFQITNTSEEDVKNELRAN 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ +V +VL EK IE T+EE+ L + + +++ K + L+
Sbjct: 352 AELKVKGDLVLEKYIEKEAIESTDEELDEQLKEFAKVYGKDDEEKFIEEFKNSPNVEFLK 411
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQ 440
I K ++ ++++ + +K +
Sbjct: 412 EDIKRKKALEKLVENTKFEIKKAEEKE 438
>gi|223933372|ref|ZP_03625359.1| trigger factor [Streptococcus suis 89/1591]
gi|330832167|ref|YP_004400992.1| trigger factor (prolyl isomerase) [Streptococcus suis ST3]
gi|223897939|gb|EEF64313.1| trigger factor [Streptococcus suis 89/1591]
gi|329306390|gb|AEB80806.1| trigger factor (prolyl isomerase) [Streptococcus suis ST3]
Length = 427
Score = 169 bits (428), Expect = 6e-40, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 168/441 (38%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I + + + ++ N+ GFR G +P + +G+
Sbjct: 1 MSVSFEAKETNRGVLTFTIGQDAIKPELDRVFNKVKKDINLPGFRKGHLPRAVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ +++ +P I + E D +
Sbjct: 61 EALYQDVVNALLPAAYEAAVAEAGLEVVAQPKIDVVSM---------EKGQDWTITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V+ + EV ++E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGDYKNLAVSVEATKEVTDEEVDAKIEAARNNLAELVIKEGPAAEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS LVG G++ +E FPED+ DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEAQLVGHAAGEEVNVEVTFPEDYQAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 PALFVTKIHEVKAKEVPALDDELAKDIDEEVETLDELKAKYRKELEAAKEVAFDDAVESA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
L+ ++PE ++ E + + + M Q + E+ + Y
Sbjct: 292 ALELAVENAEIVELPEEMIHEEVHRAINEFLGGMQQQGISPDMYFQITGTTREDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++R T +V+ + + E TEEE+ + + ++
Sbjct: 352 ADAEKRTKTNLVVEAVAKAEGFEATEEEINKEIEDLAATYNMEVAQVRSLLSP-----EM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDIAVKKAVEVITSTATVK 427
>gi|146320171|ref|YP_001199882.1| trigger factor [Streptococcus suis 98HAH33]
gi|166229944|sp|A4VZE3|TIG_STRS2 RecName: Full=Trigger factor; Short=TF
gi|145690977|gb|ABP91482.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Streptococcus suis 98HAH33]
Length = 427
Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 169/441 (38%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I + + + ++ N+ GFR G +P + +G+
Sbjct: 1 MSVSFEAKETNRGVLTFTIGQDAIKPELDRVFNKVKKDINLPGFRKGHLPRAVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ +++ +P I + E D +
Sbjct: 61 EALYQDVVNALLPAAYEAAVAEAGLEVVAQPKIDVVSM---------EKGQDWTITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V+ + EV ++E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGDYKNLAVSVEATKEVTDEEVDAKIEAARNNLAELVIKEGPATEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS LVG G++ +E FPED+ DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEAQLVGHAAGEEVNVEVTFPEDYQAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ I EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 QALFVTKIHEVKAKEVPALDDELAKDIDEEVETLDELKAKYRKELEASKEVAFDDAVESA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
L+ ++PE ++ E + + + M Q + E+ + Y
Sbjct: 292 ALELAVENAEIVELPEEMIHEEVHRAINEFLGGMQQQGISPDMYFQITGTTREDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++R T +V+ + + E TEEE+ + + ++
Sbjct: 352 ADAEKRTKTNLVVEAVAKAEGFEATEEEINKEIEDLAATYNMEVAQVRSLLSP-----EM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDIAVKKAVEVITSTATVK 427
>gi|298252430|ref|ZP_06976229.1| trigger factor [Ktedonobacter racemifer DSM 44963]
gi|297545663|gb|EFH79535.1| trigger factor [Ktedonobacter racemifer DSM 44963]
Length = 477
Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats.
Identities = 77/435 (17%), Positives = 184/435 (42%), Gaps = 25/435 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + + L+V + + + + ++ + I + +I+GFR GK P S I+ GK
Sbjct: 1 MKVSVEKLPTSEAVLEVDVTWDEMEKASDKAYKKIVKQVDIQGFRRGKAPRSMIERRMGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I E +DE+I E + L + + +P++ + IE +++
Sbjct: 61 EYIYQEGLDELISEAYRDTLVEHEIVPITQPTLD---------APSIEMGEPYHFKITVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I+ +E+ + +Q+ ++ +V +E+++++ + + ++ E +E ++VT+D V
Sbjct: 112 IVTPVELGDYKSIQMEREEADVTSEEVEQELDTLRQRLTTWKEVEHAAEYDNRVTMDLKV 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + D + LFS E +VG+ G++K P D+ + LAG++
Sbjct: 172 TSGEQKVSDLKDNPFELTHERVGLFSGMDEHIVGMNAGEEKSFTTTIPADYGNEKLAGQE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRL---GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +V +N++ A ++ + S +R S I ++ + +R++++ +
Sbjct: 232 AQFEVKLHKVEEKELPELNDEFAEKVSDGQYSSLEDLRKFLSDNILENKKRRIREELRDK 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY----HM 352
LD + + F + L++ + +L + + + + + Y
Sbjct: 292 ALDAVIEQSNFTLHPLLIDEQAEEMLHQFSHLLEQQKLSLDQYLMMMRKSREEYLKELRP 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V +VL I + NI V+ ++++ L+ + Q+ L
Sbjct: 352 DAEKSVKRQLVLDAIAKAENITVSPDDIK-MLFDLYDQSGQP-------LQRSKEQADAL 403
Query: 413 RAPIFEDKVIDHILK 427
+K ++
Sbjct: 404 ARSFLREKTTGRLVD 418
>gi|303234108|ref|ZP_07320754.1| trigger factor [Finegoldia magna BVS033A4]
gi|302494649|gb|EFL54409.1| trigger factor [Finegoldia magna BVS033A4]
Length = 440
Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats.
Identities = 82/447 (18%), Positives = 194/447 (43%), Gaps = 16/447 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E + IP+ ++ E + RS+ ++KGFR GKVP ++ YG+
Sbjct: 1 MSAVLVSKENNQAVFTCEIPAEDFNNAIEESYKKNRSRFSLKGFRKGKVPRKMLERAYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ I + + + + +P I +++ I D+K++ + D
Sbjct: 61 GLFYEDAVNLLLPGIYEKAIEELELEPVSQPDIDLDD---------ITENNDVKVKFTVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P+ E+ + L + +V + ++D ++ ++N EV+ E++ D V++++
Sbjct: 112 LKPEFELGDYSKLSAEIEEFKVTDSDVDMKVNHELESNARVQEVEGREAKENDTVSINFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD+ + ++ + ++GS E +VG GD+ ++ FPED+ L GK
Sbjct: 172 GFVDDKAFDGGEAEDYELVLGSHTFIPGFEEQIVGHNAGDEFDVNVKFPEDYHEDSLKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ I + + ++++ F++ + + +++ +E + + +
Sbjct: 232 DAKFECKINSIKEKVLPELDDEFVKDVSEFDTLDEYKKDIKEHLEKDNEQRQLVEKQNKA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ + VPES+++NE N Q + Q Q ++ +E+
Sbjct: 292 VEALIEATEISVPESMIDNEVNRQFQDFARRVQQMGLNTDQYFQITNTSEEDVKNELRAN 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ +V +VL EK IE T+EE+ L + + +++ K + L+
Sbjct: 352 AELKVKGDLVLEKYIEKEAIESTDEELDEQLKEFAKVYGKDDEEKFIEEFKNSPNVEFLK 411
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQ 440
I K ++ ++++ + +K +
Sbjct: 412 EDIKRKKALEKLVENTKFEIKKSEEKE 438
>gi|310829092|ref|YP_003961449.1| hypothetical protein ELI_3527 [Eubacterium limosum KIST612]
gi|308740826|gb|ADO38486.1| hypothetical protein ELI_3527 [Eubacterium limosum KIST612]
Length = 428
Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats.
Identities = 80/439 (18%), Positives = 170/439 (38%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M E +E +++ + + + + + I+GFR GK P I++ YGK
Sbjct: 1 MSAKELSNEKNIVSVEITVSAEDFQKAIKQSYNKNKKHFTIQGFRKGKAPRKLIEAHYGK 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ID + L + RP + + S+ ++
Sbjct: 61 GVFYEDAIDFAFPGAYKDALEELKIEPVTRPELQEVKEASE---------DGAVFIVNIG 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P + + ++ V +++ID ++ +A N E D V +D+
Sbjct: 112 LKPAATLGEYKGAEIESLEAVVSDEDIDEEITRMAGMNARMITDENAQAKKGDTVIIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD+V E + +GS + L+G KTG++ E++ FPED+ D+AGK
Sbjct: 172 GYVDDVPFEGGEGHDYPLELGSNTFIPGYEDQLIGAKTGEEVEVKVTFPEDYKQDDVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + EV ++++ A F++ ++ ++K+K+ +R+ + ++
Sbjct: 232 EAVFKTIVNEVQVKELPEIDDEFAKDVSEFDTLDELKASVAEKLKEKKTTELRRNAENKV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+D+ ++P +VE E + L ++ S + E+ +
Sbjct: 292 IDFAVQNAEIEIPYLMVEEELDRTLDTYDRQLKSQGLGLNDYLGYMGSNVEQFREGMKED 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
+R + VL I E +E TEEE++ + + ++ ++
Sbjct: 352 VERNLKADFVLTEIAEAEKLEPTEEELEEEIKRYAASMQQDFEEFKKTV--NETMEGYMK 409
Query: 414 APIFEDKVIDHILKSVQIV 432
I K ID ++ + Q+
Sbjct: 410 TDIKRRKAIDFLVDAAQVK 428
>gi|88607838|ref|YP_505538.1| putative trigger factor [Anaplasma phagocytophilum HZ]
gi|119370879|sp|Q2GJB3|TIG_ANAPZ RecName: Full=Trigger factor; Short=TF
gi|88598901|gb|ABD44371.1| putative trigger factor [Anaplasma phagocytophilum HZ]
Length = 439
Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats.
Identities = 92/448 (20%), Positives = 201/448 (44%), Gaps = 23/448 (5%)
Query: 1 MQ----VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKS 56
MQ V E +E LKR + + + + + E+++ I + A + GFR GKV ++
Sbjct: 1 MQQFYCVKEVLNERLKRGYEFAVKNEYIEEKVTEKLQGIAATARMDGFRKGKVSPEFVRR 60
Query: 57 LYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL 116
+YG+SI E + ++I +I + L + D + + I ++ +G L L
Sbjct: 61 MYGESIAGEVVAQVIDDISSKFLKEGDFGGIVTSGVEIKAYPKVCSNSEGDGG--LVYEL 118
Query: 117 SYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE---IGDKV 173
++++P++ + D + + + + ++++D + ++ N +F + ES GD+V
Sbjct: 119 KFEVMPEVPVVDIDGITLKEIEVNISQEDVDEFLEDLKANYPSFVDVDDESRGVSDGDRV 178
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
T+ Y + L S + F++G L + +VG+K G+ KE + FP D+ K
Sbjct: 179 TISYRSAFKGKALRGGSAQGFTFVLGKGQLLEQFERQIVGMKKGESKEFKLEFPLDYMAK 238
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
AGK+V ++ +++ + + LA + GF S M + + + +
Sbjct: 239 HFAGKEVDMHVTVERLSVKDEINDRETLASKCGFGSVEDMVKFATDGLNRRFADMGSVVA 298
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
+R++L+++ Y+ DVPE +V + + ++ D D +
Sbjct: 299 QRELLEHLDASYSVDVPEYIV--------------AQELGRMRRELEEGDLNDAEALTKE 344
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV G++L + + V ++ S + + + +L F+ + ++
Sbjct: 345 AEQRVKLGMLLMKVATDAGVAVEVNDILSFIRVNYSAYGRSMEDVLKLFKNREDFREHVK 404
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ EDKV+ +I+ + + ++ +L
Sbjct: 405 GKVLEDKVVRYIISRAKKDRQSMSAGEL 432
>gi|29375311|ref|NP_814465.1| trigger factor [Enterococcus faecalis V583]
gi|255971174|ref|ZP_05421760.1| trigger factor [Enterococcus faecalis T1]
gi|255973798|ref|ZP_05424384.1| trigger factor [Enterococcus faecalis T2]
gi|256617602|ref|ZP_05474448.1| trigger factor [Enterococcus faecalis ATCC 4200]
gi|256761485|ref|ZP_05502065.1| trigger factor [Enterococcus faecalis T3]
gi|256854418|ref|ZP_05559782.1| trigger factor [Enterococcus faecalis T8]
gi|256957414|ref|ZP_05561585.1| trigger factor [Enterococcus faecalis DS5]
gi|256959851|ref|ZP_05564022.1| trigger factor [Enterococcus faecalis Merz96]
gi|256964447|ref|ZP_05568618.1| trigger factor [Enterococcus faecalis HIP11704]
gi|257077590|ref|ZP_05571951.1| trigger factor [Enterococcus faecalis JH1]
gi|257080981|ref|ZP_05575342.1| trigger factor [Enterococcus faecalis E1Sol]
gi|257083643|ref|ZP_05578004.1| trigger factor [Enterococcus faecalis Fly1]
gi|257086075|ref|ZP_05580436.1| trigger factor [Enterococcus faecalis D6]
gi|257089142|ref|ZP_05583503.1| cell division trigger factor [Enterococcus faecalis CH188]
gi|257415285|ref|ZP_05592279.1| trigger factor [Enterococcus faecalis AR01/DG]
gi|257418327|ref|ZP_05595321.1| cell division trigger factor [Enterococcus faecalis T11]
gi|257420976|ref|ZP_05597966.1| cell division trigger factor [Enterococcus faecalis X98]
gi|294780498|ref|ZP_06745863.1| trigger factor [Enterococcus faecalis PC1.1]
gi|300861906|ref|ZP_07107986.1| trigger factor [Enterococcus faecalis TUSoD Ef11]
gi|41018199|sp|Q837W3|TIG_ENTFA RecName: Full=Trigger factor; Short=TF
gi|29342771|gb|AAO80535.1| trigger factor [Enterococcus faecalis V583]
gi|255962192|gb|EET94668.1| trigger factor [Enterococcus faecalis T1]
gi|255966670|gb|EET97292.1| trigger factor [Enterococcus faecalis T2]
gi|256597129|gb|EEU16305.1| trigger factor [Enterococcus faecalis ATCC 4200]
gi|256682736|gb|EEU22431.1| trigger factor [Enterococcus faecalis T3]
gi|256709978|gb|EEU25022.1| trigger factor [Enterococcus faecalis T8]
gi|256947910|gb|EEU64542.1| trigger factor [Enterococcus faecalis DS5]
gi|256950347|gb|EEU66979.1| trigger factor [Enterococcus faecalis Merz96]
gi|256954943|gb|EEU71575.1| trigger factor [Enterococcus faecalis HIP11704]
gi|256985620|gb|EEU72922.1| trigger factor [Enterococcus faecalis JH1]
gi|256989011|gb|EEU76313.1| trigger factor [Enterococcus faecalis E1Sol]
gi|256991673|gb|EEU78975.1| trigger factor [Enterococcus faecalis Fly1]
gi|256994105|gb|EEU81407.1| trigger factor [Enterococcus faecalis D6]
gi|256997954|gb|EEU84474.1| cell division trigger factor [Enterococcus faecalis CH188]
gi|257157113|gb|EEU87073.1| trigger factor [Enterococcus faecalis ARO1/DG]
gi|257160155|gb|EEU90115.1| cell division trigger factor [Enterococcus faecalis T11]
gi|257162800|gb|EEU92760.1| cell division trigger factor [Enterococcus faecalis X98]
gi|294452497|gb|EFG20934.1| trigger factor [Enterococcus faecalis PC1.1]
gi|295114071|emb|CBL32708.1| trigger factor [Enterococcus sp. 7L76]
gi|300848431|gb|EFK76188.1| trigger factor [Enterococcus faecalis TUSoD Ef11]
gi|323479911|gb|ADX79350.1| trigger factor, peptidyl-prolyl cis/trans isomerase [Enterococcus
faecalis 62]
Length = 427
Score = 169 bits (427), Expect = 8e-40, Method: Composition-based stats.
Identities = 70/438 (15%), Positives = 170/438 (38%), Gaps = 23/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L I + + ++ N+ GFR GKV + +YG+
Sbjct: 1 MSAKWEKKGTNDGVLTFSIEQAVIEKGLTQAFNKVKKNLNVPGFRKGKVSRTVFNRMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P I + D +
Sbjct: 61 EALYEDALNAVLPEAYEAAVLEAGIEPVAQPKIDVESM---------NKGEDWVITAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + +L V++ EV +++++ ++ ++ +KE + D V +D+
Sbjct: 112 VKPEVKLGEYKNLTVSKQDREVTDEDVEARLKREQESQAELVIKEDAAAENGDTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + E +N +GS + LVG K G++ E+ FPED+ +DLAGK
Sbjct: 172 GFLGDEAFEGGKGENYSLELGSNSFIPGFEDQLVGKKAGEEVEVNVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++ A ES ++ +++ + E + +
Sbjct: 232 EAVFKVTVHEVKAKELPELDDEFAKDVDDSVESLDELKEKFRKELTEAKEAAAEEAKDEE 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++P +V +E + + + M + +E+ + +
Sbjct: 292 AIRLAVENAEIVELPHVMVHDEVHRSMDEFLNNMQRQGISPEMYYQLTGSTEEDLHKQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + NIEVT+E++ + + ++ E ++
Sbjct: 352 GEAETRTKTNLVIEAVAKAENIEVTQEDIDAEVKDLAEQYNMPEAQVRKVLNND-----M 406
Query: 412 LRAPIFEDKVIDHILKSV 429
L I + ++ I ++
Sbjct: 407 LEHDIRMKRAVETITETA 424
>gi|332359232|gb|EGJ37053.1| trigger factor [Streptococcus sanguinis SK49]
Length = 427
Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E + V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYKDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P +V E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMVHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASSEEIEAEVTSLASDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVELITSTAKVK 427
>gi|125718786|ref|YP_001035919.1| trigger factor [Streptococcus sanguinis SK36]
gi|166229945|sp|A3CQB4|TIG_STRSV RecName: Full=Trigger factor; Short=TF
gi|125498703|gb|ABN45369.1| Trigger factor, putative [Streptococcus sanguinis SK36]
Length = 427
Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E + V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYKDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P +V E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMVHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASAEEIEAEVTSLASDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVELITSTAKVK 427
>gi|315170719|gb|EFU14736.1| trigger factor [Enterococcus faecalis TX1342]
Length = 434
Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 70/438 (15%), Positives = 170/438 (38%), Gaps = 23/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L I + + ++ N+ GFR GKV + +YG+
Sbjct: 8 MSAKWEKKGTNDGVLTFSIEQAVIEKGLTQAFNKVKKNLNVPGFRKGKVSRTVFNRMYGE 67
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P I + D +
Sbjct: 68 EALYEDALNAVLPEAYEVAVLEAGIEPVAQPKIDVESM---------NKGEDWVITAEVT 118
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + +L V++ EV +++++ ++ ++ +KE + D V +D+
Sbjct: 119 VKPEVKLGEYKNLTVSKQDREVTDEDVEARLKREQESQAELVIKEDAAAENGDTVVIDFE 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + E +N +GS + LVG K G++ E+ FPED+ +DLAGK
Sbjct: 179 GFLGDEAFEGGKGENYSLELGSNSFIPGFEDQLVGKKAGEEVEVNVTFPEDYQAEDLAGK 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++ A ES ++ +++ + E + +
Sbjct: 239 EAVFKVTVHEVKAKELPELDDEFAKDVDDSVESLDELKEKFRKELTEAKEAAAEEAKDEE 298
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++P +V +E + + + M + +E+ + +
Sbjct: 299 AIRLAVENAEIVELPHVMVHDEVHRSMDEFLNNMQRQGISPEMYYQLTGSTEEDLHKQFE 358
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + NIEVT+E++ + + ++ E ++
Sbjct: 359 GEAETRTKTNLVIEAVAKAENIEVTQEDIDAEVKDLAEQYNMPEAQVRKVLNND-----M 413
Query: 412 LRAPIFEDKVIDHILKSV 429
L I + ++ I ++
Sbjct: 414 LEHDIRMKRAVETITETA 431
>gi|313890317|ref|ZP_07823949.1| trigger factor [Streptococcus pseudoporcinus SPIN 20026]
gi|313121303|gb|EFR44410.1| trigger factor [Streptococcus pseudoporcinus SPIN 20026]
Length = 427
Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 89/441 (20%), Positives = 182/441 (41%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I ++ + ++ I+ N+ GFR G VP +G+
Sbjct: 1 MSTSFENKATNRGVITFTINQEKIKPALDQAFNKIKKDLNVPGFRKGHVPRPIFNKKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ I+ E LS+ D +P I + E D ++
Sbjct: 61 EVLYEDALNIILPGAYQEALSELDLDVVAQPKIDVVSM---------EKGQDWEISAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + DL V + EV ++E+D ++ KN VKE + GD V +D+
Sbjct: 112 TKPEVKLGDYKDLTVEVELSKEVTDEEVDEKIERERKNLAELIVKEDAAVEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG K G+ K++ FPE++ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEEQLVGAKAGETKDVNVTFPENYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +I EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DAKFVTTIHEVKAKEVPELDDELAKDIDEEVETLDELKAKYRKELEVAKEIAYDDAVEGA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
++ + ++PE ++ +E + + + M + +++ + Y
Sbjct: 292 AIELAVDNAEIVELPEEMIHDEVHRSMNEFMGNMQRQGISPEMYFQLTGTSEDDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E T+EE++ + + + +++
Sbjct: 352 AEADKRVKTNLVIEAIAKAEGFEATDEEIEKEIKELATEYNMPVEQVRSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I +S ++
Sbjct: 407 LKHDIAMKKAVEVITESAKVK 427
>gi|146317984|ref|YP_001197696.1| trigger factor [Streptococcus suis 05ZYH33]
gi|253751205|ref|YP_003024346.1| trigger factor (prolyl isomerase) [Streptococcus suis SC84]
gi|253753106|ref|YP_003026246.1| trigger factor (prolyl isomerase) [Streptococcus suis P1/7]
gi|253754928|ref|YP_003028068.1| trigger factor (prolyl isomerase) [Streptococcus suis BM407]
gi|166229946|sp|A4VT57|TIG_STRSY RecName: Full=Trigger factor; Short=TF
gi|145688790|gb|ABP89296.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Streptococcus suis 05ZYH33]
gi|251815494|emb|CAZ51072.1| trigger factor (prolyl isomerase) [Streptococcus suis SC84]
gi|251817392|emb|CAZ55128.1| trigger factor (prolyl isomerase) [Streptococcus suis BM407]
gi|251819351|emb|CAR44730.1| trigger factor (prolyl isomerase) [Streptococcus suis P1/7]
gi|292557767|gb|ADE30768.1| Trigger factor [Streptococcus suis GZ1]
gi|319757477|gb|ADV69419.1| trigger factor [Streptococcus suis JS14]
Length = 427
Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 169/441 (38%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I + + + ++ N+ GFR G +P + +G+
Sbjct: 1 MSVSFEAKETNRGVLTFTIGQDAIKPELDRVFNKVKKDINLPGFRKGHLPRAVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ +++ +P I + E D +
Sbjct: 61 EALYQDVVNALLPAAYEAAVAEAGLEVVAQPKIDVVSM---------EKGQDWTITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V+ + EV ++E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGDYKNLAVSVEATKEVTDEEVDAKIEAARNNLAELVIKEGPAAEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + +N +GS LVG G++ +E FPED+ DLAGK
Sbjct: 172 GSIDGVEFDGGKGENFSLGLGSGQFIPGFEAQLVGHAAGEEVNVEVTFPEDYQAADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ I EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 QALFVTKIHEVKAKEVPALDDELAKDIDEEVETLDELKAKYRKELEASKEVAFDDAVESA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
L+ ++PE ++ E + + + M Q + E+ + Y
Sbjct: 292 ALELAVENAEIVELPEEMIHEEVHRAINEFLGGMQQQGISPDMYFQITGTTREDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++R T +V+ + + E TEEE+ + + ++
Sbjct: 352 ADAEKRTKTNLVVEAVAKAEGFEATEEEINKEIEDLAATYNMEVAQVRSLLSP-----EM 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + +
Sbjct: 407 LKHDIAVKKAVEVITSTATVK 427
>gi|324992388|gb|EGC24309.1| trigger factor [Streptococcus sanguinis SK405]
gi|327460617|gb|EGF06952.1| trigger factor [Streptococcus sanguinis SK1]
gi|327472347|gb|EGF17778.1| trigger factor [Streptococcus sanguinis SK408]
gi|332365533|gb|EGJ43293.1| trigger factor [Streptococcus sanguinis SK1059]
Length = 427
Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + + ++ + GFR G +P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFKSVKKDIAVPGFRKGHLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E + V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYKDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P ++ E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANSEIVDLPAEMIHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + ++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASAEEIEAEVTSLATDYNMEVDRVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|160915948|ref|ZP_02078156.1| hypothetical protein EUBDOL_01973 [Eubacterium dolichum DSM 3991]
gi|158432424|gb|EDP10713.1| hypothetical protein EUBDOL_01973 [Eubacterium dolichum DSM 3991]
Length = 423
Score = 169 bits (427), Expect = 9e-40, Method: Composition-based stats.
Identities = 76/436 (17%), Positives = 176/436 (40%), Gaps = 24/436 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KSI 62
+ E EL + + + + K N+ GFRPG P + +K +++
Sbjct: 3 NWELKEKSTGELITTVEGEAWKTAQKKAFNRLAKKVNLPGFRPGTAPAALVKKQISTQNV 62
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
L E ID++ E + + + D RPS+ I + + + P
Sbjct: 63 LMEAIDDVAGEALSAAIKEHDLWVVTRPSLDIESI----------DEEKVTFKFIVTVKP 112
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYTVSV 181
++++ + L + ++ V+ ++D ++ + + +E + E G+ +D+
Sbjct: 113 EVKLGDYKGLDIHKEEVNVEAADVDAEITRLQERFADLVLKEEGKVENGNTAVIDFEGFK 172
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D+V E ++ ++GS E L+G+ + K+I FPE++ + +LAG+ V
Sbjct: 173 DDVPFEGGKGESYPLVIGSGTFIPGFEEQLIGMGVEETKDINVTFPEEYQVAELAGQPVV 232
Query: 242 LNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ E+ + VN++L + E+ A R + +++ QK + ++L
Sbjct: 233 FKVTVHEIKEKVLPEVNDELVKQAKVENVETVDAYREFAHKNLEETKTREANQKFENEVL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
I ++P+ +VE E + +++ + + Q + E + A
Sbjct: 293 TAIVEAAEVEIPDVMVEEETDNLVRDFEQRLQAQGFGLDQFLQITGNTKEGIREEMSKDA 352
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+V +VL I ++EV+EE+++ L + ++ +
Sbjct: 353 YNKVKVRLVLEAIAAAESLEVSEEDIEKELNNIAEMYAMPLDQVKAAISAD-----AISY 407
Query: 415 PIFEDKVIDHILKSVQ 430
+ K ++ + ++V+
Sbjct: 408 DLRIRKALEFVKENVK 423
>gi|212715680|ref|ZP_03323808.1| hypothetical protein BIFCAT_00580 [Bifidobacterium catenulatum DSM
16992]
gi|212661047|gb|EEB21622.1| hypothetical protein BIFCAT_00580 [Bifidobacterium catenulatum DSM
16992]
Length = 453
Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats.
Identities = 64/416 (15%), Positives = 160/416 (38%), Gaps = 23/416 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K L V + + ++I + N+ GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVRLTVTVDPEEFNPYLDNARKEIAKQVNVPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + E+ + L ++ +P I + E + LK + +
Sbjct: 61 GAVAGEAVNNGVPELYSKALEEKGIHPMAQPEIDVQE-----VPESAKDETKLKFVATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ + D +++ E+ +++I+ ++ + + + + GD +D T
Sbjct: 116 RRPDIELPAIDGMEIEVAKAEITDEDINNRLEALRQRFGTLVGVDRPAAKGDYANIDLTA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D +++ S++ V + +GS + E L GL +G++ E + G+K
Sbjct: 176 EIDGEVVD--SQEGVSYELGSETMLDGLDEALEGLSSGEETTFEGTLEAG----EHEGEK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + V + +++D A F++ ++ + Q +E + +
Sbjct: 230 AQVKVKVNSVKAEELPELDDDFASEASEFDTLDELKEDLKKAASQDAEGRQATAARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VP+ + L+ V + + + +E ++ +
Sbjct: 290 AKLEEGLEIPVPKGVKAEMVEQQLKGV----------TADPANATKEQKAEAEETVEKEL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+VL + EK +I+V++ ++ + L ++ + + + ++
Sbjct: 340 RDQMVLDVLAEKLDIKVSQADVFNFLASIAQQYGMDPNAFIQAIMRNGQLGSAVQE 395
>gi|253680999|ref|ZP_04861802.1| trigger factor [Clostridium botulinum D str. 1873]
gi|253562848|gb|EES92294.1| trigger factor [Clostridium botulinum D str. 1873]
Length = 432
Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats.
Identities = 86/440 (19%), Positives = 199/440 (45%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +L++ + + ++ + + + NI GFR GK P++ I YG+
Sbjct: 1 MNTKIETIENNVVKLEITVEKEKFNEAIKKAYKKNVKRFNIPGFRKGKAPMNIITRFYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + I+ +E P+ + + + P I + E I D +
Sbjct: 61 GVFYEDAINTCCEEAYPKAVEEHSLQPVDYPKIDVVE---------IGAGKDFVFTATVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDY 177
+ P++++ ++ ++ ++ V E+++++Q+ + + N + + E GD +D+
Sbjct: 112 VRPEVKLDNYKGVEAKRNTYTVKEEDVEKQLNAMLEKNARIITKEEGATVESGDIAVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D E K+ +G+ + LVGLK G++KE+ FPE + +L G
Sbjct: 172 KGFIDGKAFEGGEGKDYSLEIGTGTFIDNFEDQLVGLKVGEEKEVNVKFPEQYGRDELNG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ IKE+ + ++++ A F++ ++ ++KI++ ++ + + +
Sbjct: 232 KQAMFEVKIKEIKAKELPALDDEFAKETSEFDTLEELKADVTKKIEEANKIREKNEYEEA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+++ +SNK D+PE ++E E + +++ + + Q +S + + +Y
Sbjct: 292 VIEAVSNKAEIDIPEVMIEKEIDMMIKDLEMRLGYQGLDLKSYYQYTNSSEAKVREYMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF--PGHEKKMLDHFQKYPNALA 410
A+++V T +VL I + IE TEEE+++ + ++ K++D
Sbjct: 352 TAEKKVKTELVLEKIVKDEKIEATEEEIKAKAKEMAQQYGGGQDIDKLVDAIM--GAQKD 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
L I +K ID ++++ +
Sbjct: 410 VLANQIANEKAIDFLVENSK 429
>gi|225352284|ref|ZP_03743307.1| hypothetical protein BIFPSEUDO_03900 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157531|gb|EEG70870.1| hypothetical protein BIFPSEUDO_03900 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 453
Score = 169 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 64/416 (15%), Positives = 160/416 (38%), Gaps = 23/416 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L V + + ++I + N+ GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTVTVDPEEFNPYLDNARKEIAKQVNVPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + E+ + L ++ R +P I + E + LK + +
Sbjct: 61 GAVAGEAVNNGVPELYSKALEEKGIRPMAQPEIDVQE-----VPESAKDETKLKFVATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ D +++ E+ +++I+ ++ + + + + GD +D T
Sbjct: 116 RRPDIELPEIDGMEIEVAKAEITDEDINNRLEALRQRFGTLVGVDRPAAKGDYANIDLTA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D +++ S++ V + +GS + E L GL G++ E + G+K
Sbjct: 176 EIDGEVVD--SQEGVSYELGSETMLDGLDEALEGLSAGEETTFEGTLEAG----EHEGEK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + V + +++D A F++ ++ + Q +E + +
Sbjct: 230 AQVKVKVNSVKAEELPELDDDFASEASEFDTLDELKEDLKKAASQDAEGRQATAARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VP+ + L+ V + + + +E ++ +
Sbjct: 290 AKLEEGLEIPVPKGVKAEMVEQQLKGV----------TADPANATKEQKAEAEETVEKEL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+VL + EK +++V++ ++ + L ++ + + + ++
Sbjct: 340 RDQMVLDVLAEKLDVKVSQSDVFNFLASIAQQYGMDPNAFIQAIMRNGQLGSAVQE 395
>gi|326790229|ref|YP_004308050.1| trigger factor [Clostridium lentocellum DSM 5427]
gi|326540993|gb|ADZ82852.1| trigger factor [Clostridium lentocellum DSM 5427]
Length = 432
Score = 169 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 89/441 (20%), Positives = 187/441 (42%), Gaps = 16/441 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E + +L V + ++T + ++ E ++ NI+GFR GKVP + I+ +YG
Sbjct: 1 MNTQVETMEKSEVKLTVEVEGAKVTAAIDKAYEAMKKDFNIQGFRKGKVPRAMIEKMYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ ++ D +I E + + + A R + +K
Sbjct: 61 EVFFNKAADILIDETLFAAIEENKIDIAAR-------ISPNGLEVTEMSKDGMKYTAIIT 113
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++ + + +L+V + EV ++E++ + + A+ N V++ DKVT+D+
Sbjct: 114 VKPEVTLGEYKNLKVEVEKTEVTDEEVNEAVNKEAQKNAREITVEDRAVMPQDKVTIDFE 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E + ++GS + L+G G++ E+ FP ++ + +LA K
Sbjct: 174 GFVDGAAFEGGKGTDYDLVIGSKSFIDNFEDQLIGKNIGEEVEVNVTFPAEYHVAELASK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+IK + +N+D A FE+ + + K+ + E + ++Q
Sbjct: 234 PALFKVAIKGIKVNELPEINDDFAADISEFETLAEYKEDLKAKLLKDKETNNKNIFEQQA 293
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ T +VP ++VE + + ++ M+S Q Q + + +
Sbjct: 294 VENAVANATLEVPAAMVEEQVDRNVKNFSNRMASQGLQLEQYLQFTGQSMDAFRENFAKD 353
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ ++ T +VL + E + V+EE++ L + +++ F Y L
Sbjct: 354 AEHQIKTRLVLEKVAEVEGVTVSEEDIDEELKTIAAMYQMPYEELKKSFANYEQ--DALT 411
Query: 414 APIFEDKVIDHILKSVQIVDR 434
A I K + I +S + V++
Sbjct: 412 ADIKVQKAVKVITESAEKVEK 432
>gi|311114521|ref|YP_003985742.1| trigger factor [Gardnerella vaginalis ATCC 14019]
gi|310946015|gb|ADP38719.1| trigger factor [Gardnerella vaginalis ATCC 14019]
Length = 452
Score = 169 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 63/422 (14%), Positives = 163/422 (38%), Gaps = 24/422 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L + ++ ++I + N+ GFR G VP + G
Sbjct: 1 MKISVRNLEPTKVKLTITADLEDFEPFMDQARKEIAKQINVPGFRKGHVPGKIVDQRVGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + E+ + L ++ R +P + E + + LK + +
Sbjct: 61 GAVAGEAVNSAVPELYSKALEEKKIRPMDQPEFDVQE-----VPESAKDELKLKFVATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P+ +++ F +++ + EV +++++ ++ + + + ++ GD +D
Sbjct: 116 RRPEFKLNKFKGVEIEVEKPEVTDEDVNARLEALRQRFGTLVGVDRPAKKGDFANIDLEA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D+ S+ V + +GS + E L GL G++ E GKK
Sbjct: 176 RIDDE--VADSQNGVSYELGSNTMLDGLDEALEGLSAGEETTFEGTLEAG----KNQGKK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + V + +N+D A F++ ++ + +Q +E + +
Sbjct: 230 AQVKVKVNSVKTQELPELNDDFAQEASEFDTFEELKADVRKSCEQANEGRQATMARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
I + VP+ + E L+ + + + + +E + A++ +
Sbjct: 290 AKIQEEVEIPVPKGVKEKAVAEHLKGM----------TPDPEKATKEQKEEAEKAAEKEL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + E ++ V++ ++ + L ++ + ++ + L +
Sbjct: 340 RDQMVLDALAESLDVSVSQADVTNFLVSVAQQYGMDPSQFINAIVRN-GQLGSAVQEVAR 398
Query: 419 DK 420
K
Sbjct: 399 SK 400
>gi|73666833|ref|YP_302849.1| trigger factor [Ehrlichia canis str. Jake]
gi|119370897|sp|Q3YSQ4|TIG_EHRCJ RecName: Full=Trigger factor; Short=TF
gi|72393974|gb|AAZ68251.1| Trigger factor [Ehrlichia canis str. Jake]
Length = 440
Score = 169 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 101/442 (22%), Positives = 194/442 (43%), Gaps = 18/442 (4%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
V E ++ LK E + +I D + ++ +I + GFR GK + +K Y +
Sbjct: 7 VKEVSNDKLKWEYEFVIDKKYFLDQLDSKLSEIAKNVKVPGFRVGKASIDLVKKEYLNDV 66
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
+++ + + I+ + + + +I I + + + +L +LS++++P
Sbjct: 67 MTDVVRKTIESTSSDFVKSNKFGEIISSNIDIVSYPNYYSDNDSKE-ENLVYKLSFEVMP 125
Query: 123 QIEISSFDDLQ---VTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ + D + + DI E D E + + N + E + GDKV +DY
Sbjct: 126 EAPLMDIDSIVLNGIEVDIQESDVSEFIENLKKQRPNFIVVNGAEYAVQEGDKVVIDYQN 185
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
V IL S K+ ++G E L+G++ G+ K FP+D+S+ LAGK
Sbjct: 186 KVKGKILRGGSAKDFALVIGKGVALKEFENQLLGMRVGETKSFPLTFPDDYSVAYLAGKT 245
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ +K ++ V N +A GF+ + M ++I Q + +V +K+++ D
Sbjct: 246 TDMSVVVKSIYVVKDVQDNESVARSYGFKDVAEMENFVRKQIGQQFDQMVLTIMKKELFD 305
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
Y+ N Y+ DVPE +V+ E I ++ + E+ A RRV
Sbjct: 306 YMDNTYSIDVPECVVKQEITKI--------------NKEILDSGEDIQIDVEKEAVRRVK 351
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + NNI + E++ S + + +L Q N + + ED
Sbjct: 352 LGMLLIRMSRHNNITIKNEDVLSFIKNNYTDYGVDINNVLKMLQSNKNFANYISGKVLED 411
Query: 420 KVIDHILKSVQIVDRKVTFDQL 441
KVI++I+K V+ + +T ++
Sbjct: 412 KVINYIIKLVKKDRKVMTTKEI 433
>gi|116492903|ref|YP_804638.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Pediococcus pentosaceus ATCC 25745]
gi|122265633|sp|Q03F26|TIG_PEDPA RecName: Full=Trigger factor; Short=TF
gi|116103053|gb|ABJ68196.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Pediococcus pentosaceus ATCC 25745]
Length = 435
Score = 169 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 67/438 (15%), Positives = 170/438 (38%), Gaps = 23/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + +L + ++++ + ++ + + + N+ GFR G VP +YG+
Sbjct: 1 MTAKWEKTGTNEGKLTFEVGTDKIKEGVDKAFDRTKKQLNVPGFRKGHVPRQIFNKMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + + E L
Sbjct: 61 EALYQDALNIVLPEAYEAAIKEAGIEPVDQPQVDVESM---------EKGEAWVLSAIVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + ++V + V KE+D ++ + + +KE + D VT+D+
Sbjct: 112 VKPEVKLGEYKGVKVIKQSTRVTSKEVDEEIEKKREQQAELVLKEGKPAENGDTVTIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N ++GS + L+G T + ++ FP+D+ +DL GK
Sbjct: 172 GSVDGVAFDGGKADNYDLVLGSNSFIPGFEDQLIGHNTDEDVDVNVTFPDDYQAEDLQGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCS---QKIKQHSEFLVRQKVKR 295
I E+ + ++++ A + + +S + + + K
Sbjct: 232 DALFKVKIHEIKTKELPELDDEFAKDVDEDVDSLEDLKVKTKEEIKSRKIQAASDAKETE 291
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ + N ++PE+++ + + + + M + +++
Sbjct: 292 AVQAAVDNAEIAEIPEAMLNEDVDRQVNQYLANMQQQGISPEMYFQLTGSSEDQLRDQLR 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ RV T +VL I E I+ +++E+ + + ++ EK + +
Sbjct: 352 EGAENRVKTTLVLEAIVEAEKIDPSDDEVAAEIKDLAEQYGMEEKAVRSALSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSV 429
++ + ++ I S
Sbjct: 407 IKHDVAIKSAVELIKDSA 424
>gi|297587292|ref|ZP_06945937.1| peptidylprolyl isomerase [Finegoldia magna ATCC 53516]
gi|297575273|gb|EFH93992.1| peptidylprolyl isomerase [Finegoldia magna ATCC 53516]
Length = 441
Score = 169 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 82/442 (18%), Positives = 194/442 (43%), Gaps = 16/442 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E + IP+ ++ E + RS+ ++KGFR GKVP ++ YG+
Sbjct: 1 MSAVLVSKENNQAVFTCEIPAEDFNNAIEESYKKNRSRFSLKGFRKGKVPRKMLERAYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ I + + + + +P I +++ I D+K++ + D
Sbjct: 61 GLFYEDAVNLLLPGIYEKAIEELELEPVSQPDIDLDD---------ITENNDVKVKFTVD 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P+ E+ + +L + +V + ++D ++ ++N EV+ E++ D V++++
Sbjct: 112 LKPEFELGDYSNLSAEIEEYKVTDSDVDLKINHELESNARVQEVEGREAKENDTVSINFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V++ + ++ + ++GS E +VG GD+ ++ FPED+ L GK
Sbjct: 172 GFVEDKAFDGGEAEDYELVLGSHTFIPGFEEQIVGHNVGDEFDVNVKFPEDYHEDSLKGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ I + + ++++ F++ + + +++ +E + + +
Sbjct: 232 DAKFECKINSIKEKVLPELDDEFVKDVSEFDTLDEYKKDIKEHLEKDNEQRQLVEKQNKS 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
++ + + VPES++ENE N Q + Q Q ++ +E+
Sbjct: 292 VEALIDATEITVPESMIENEVNRQFQDFARRVQQMGLNTDQYFQITNTSEEDVKNELRAN 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ +V +VL EK IE T+EE+ L + + +++ K + L+
Sbjct: 352 AELKVKGDLVLEKYIEKEAIESTDEELDEQLKEFAKVYGQDDEEKFIEEFKNSPNVEFLK 411
Query: 414 APIFEDKVIDHILKSVQIVDRK 435
I K ++ +++ + +K
Sbjct: 412 EDIKRKKALEKLVEITKFETKK 433
>gi|319955769|ref|YP_004167032.1| trigger factor [Nitratifractor salsuginis DSM 16511]
gi|319418173|gb|ADV45283.1| trigger factor [Nitratifractor salsuginis DSM 16511]
Length = 433
Score = 169 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 85/434 (19%), Positives = 200/434 (46%), Gaps = 15/434 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + IP++ + ++ ++ + + GFR GKVP +K +YG+
Sbjct: 1 MEIKTEKINNANVLIKGEIPTSEVEAKVDKLAKEAGKQMKVDGFRKGKVPAHIVKKMYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + E I++++ + ++ A I +G ++ + +
Sbjct: 61 KLQEDAEGEAIRDMLNQAYAEAGIEPA-------EIIGQPIFKKYEKGDEKIEAEIQICL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
PQ+++ ++ L + ++ EV E+EI+ ++ +A+ ++ + GD D+T
Sbjct: 114 RPQVDVEGYEKLVPSYEVPEVSEEEIEERLKTLAEQVAPLVSLEEDRPLQEGDTAVFDFT 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E S ++ + +GS E ++G+K G+ K I+ FPED+ +LAGK
Sbjct: 174 GYLDGEPFEGGSAQDFELQIGSGQFIPGFEEQMIGMKKGETKRIKVTFPEDYQAPNLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCSQKIKQHSEFLVRQKV-K 294
+ ++K++ ++++LA + + + +++ +++I+ + + K
Sbjct: 234 ETEFEITLKDIKVKAEPKIDDELAKAITKKEDATLESLKEQLAEQIRTEKLNKLYNEELK 293
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQYYHML 353
++LD + + FD+PE++VE E + + + +S + Q EE +
Sbjct: 294 PKLLDALVEAFEFDLPENIVEQEIDNLANQKAQSLSKEELEAIQGNAEKIEELRESVRDD 353
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R V ++ + +K N++V+++E+ LY + + +L ++QK N + ++
Sbjct: 354 ATRSVKATFIVDALAKKENVDVSDQEVSQVLYYEALMAGQDPEALLKYYQKN-NLIPAIK 412
Query: 414 APIFEDKVIDHILK 427
+ EDK+ +L
Sbjct: 413 MGMIEDKLFGKLLD 426
>gi|320120479|gb|ADW16164.1| hypothetical protein HMPREF0389_01719 [Filifactor alocis ATCC
35896]
Length = 426
Score = 169 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 82/431 (19%), Positives = 177/431 (41%), Gaps = 17/431 (3%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-LSE 65
E L + + + + + R++ I GFR GK P ++S YG+ + E
Sbjct: 6 KKEKSLVTLKMTVKGEDFAKAIDTVFKKNRTRFAIPGFRKGKAPRKIVESYYGEGVFYEE 65
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
++E+ I E + + RP I G I+ D + + + P++
Sbjct: 66 ALNEVFPVIFTEAIKDHELDVVSRPEIE--------ELGEIQSGEDFDVTVQVYVRPEVT 117
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSVDNV 184
+ + +LQV ++ EV ++E+++ + + N ++ ++ GD V +D+ VD V
Sbjct: 118 LGEYKELQVEKEEVEVTDEEVNQDLEIKREQNARMVAIEDRPAKDGDTVVIDFQGKVDGV 177
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
+ + ++GS +VG+ + K+I FPE + +DL GK
Sbjct: 178 AFDGGKGEGYTLVLGSNSFIEGFEAQIVGMNLEEVKDINVTFPEQYHSEDLQGKDAVFTV 237
Query: 245 SIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
+ E+ +++D + FE ++ K+ + + + I+D
Sbjct: 238 KLHEIKEKELPELDDDFVMDISEFEILEELKADIRAKLYETKKAGAETAYRNAIIDKAVE 297
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAKRRVL 359
T +VP+ ++ENE + + + + ++ + A+R+V
Sbjct: 298 ASTVEVPDVMIENEVESMAHEFGQNLQYQGLQLEDYFKYTKSNMMDLKGQMRPDAERKVR 357
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+VL I + NIEV++E+++ + ++ +K+ + + + L+ I
Sbjct: 358 NSLVLDEISKAENIEVSDEDLEKEYTKMAEQYKMEVEKVKELVGRTD--VEVLKDNIRIQ 415
Query: 420 KVIDHILKSVQ 430
K ID ++ S +
Sbjct: 416 KTIDLLIASAK 426
>gi|57234483|ref|YP_181450.1| trigger factor [Dehalococcoides ethenogenes 195]
gi|119370893|sp|Q3Z8J9|TIG_DEHE1 RecName: Full=Trigger factor; Short=TF
gi|57224931|gb|AAW39988.1| trigger factor [Dehalococcoides ethenogenes 195]
Length = 448
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 86/474 (18%), Positives = 186/474 (39%), Gaps = 35/474 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V +K EG + + V + + ++ + K I GFR GK P + G+
Sbjct: 1 MKVTDKKIEGCQASITVEMDPAEVEAGLSKTYRRLVKKVEIPGFRKGKTPRDVFEKYLGR 60
Query: 61 S-ILSETIDEIIKEIVPEIL-SKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+L E +D+I+ E + + + + P I + T
Sbjct: 61 EKMLDEVVDDIVPEACQQAINDDEEIKPFAAPKIAMVT------------TEPFVFSARI 108
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
+ P +E+ + ++ ++ E+ E+ ID + ++ +E E ++GD + +
Sbjct: 109 PLPPVVELGDYKTIRAAKEKVEITEENIDTVIDQVLHQRATWEKAERPVKMGDMLLMKVE 168
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+++ ++ + E LV + G+ KE FPEDH+ +LAGK
Sbjct: 169 STLNGEPYLNREDMQYSVREEAIYPAPGFGEHLVDMVVGEPKEFSIVFPEDHARAELAGK 228
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I+E+ +N+ A F + + +R + +++ + + K + Q
Sbjct: 229 TAAFKVTIQEIREEKLPELNDAFAHELNPEFNTLAELRQRIRENMQERQDDQAQAKFEDQ 288
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI-----DEEDLQYYH 351
I++ + D PE +VE E + I+++ + S + + + + Q Y
Sbjct: 289 IVEALIKMSKIDYPEVMVETELDQIIEQQLQRLQSTIKSPEEFRATLSQLSPADMQQRYR 348
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
LA++RV + + LG + N+ ++EE+ + + + +++ + K P+
Sbjct: 349 PLAEQRVASSLALGKLATTENLIPSDEEVDAEIERLTQDSGDKKEEEKAFYNK-PDTRDR 407
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
L + K + I D++ + + E D+ K E
Sbjct: 408 LIQLLTARKTMAFI-------------DEIALQPALEAVEPKSDEGEKTEEADK 448
>gi|147669289|ref|YP_001214107.1| trigger factor [Dehalococcoides sp. BAV1]
gi|189035935|sp|A5FRE4|TIG_DEHSB RecName: Full=Trigger factor; Short=TF
gi|146270237|gb|ABQ17229.1| trigger factor [Dehalococcoides sp. BAV1]
Length = 447
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 86/473 (18%), Positives = 183/473 (38%), Gaps = 34/473 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V +K EG + + V + S + + ++ + K I GFR GK P + +
Sbjct: 1 MKVTDKKIEGCQASITVEMDSTEVEEGLSKTYRRLVKKVEIPGFRKGKAPRDVFEKYVSR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E +D+I+ E + + + + P + + T
Sbjct: 61 EKMLDELVDDIVPEACQKAIQDEEIKPFATPKVAMVT------------TDPFVFSARIP 108
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P +E+ + ++ T++ E+ E+ ID + ++ +E E ++GD + +
Sbjct: 109 LPPVVELGDYKTIRATKETVEIAEENIDTVVDQVLHQRATWETAERPVKMGDMLLMQVES 168
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+++ ++ + LV + G+ KE FPEDH+ +LAGK
Sbjct: 169 TLNGEPYLNREDMQYSVREEAIYPAPGFGGYLVDMVAGEPKEFSIVFPEDHARAELAGKT 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+++E+ +N+ A F + S +R + ++ + + K + QI
Sbjct: 229 AAFKVTVREIKEEKLPELNDAFAHELNPEFNTLSELRQRIRENMQDRQDDKAQAKFEDQI 288
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV-----DSIDEEDLQYYHM 352
++ + D PE +VE E + I+++ + S + + E+ Q Y
Sbjct: 289 VEALIKMSKIDYPEVMVEAELDQIIEQQLQRLQSNVKSPEEFRAMLSQMTPEDMQQRYRP 348
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
LA++RV + + LG + N+ +EE+ + + + + +K+ P L
Sbjct: 349 LAEQRVASSLALGKLATTENLVPNDEEVDAEIEKLITDAG-DKKEEEKALYNQPETRGRL 407
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ K + I D++ + + E D+ K E
Sbjct: 408 IQLLTARKTMAFI-------------DEIALQPALEAVESKADEDEKTEEADK 447
>gi|311113767|ref|YP_003984989.1| trigger factor [Rothia dentocariosa ATCC 17931]
gi|310945261|gb|ADP41555.1| trigger factor [Rothia dentocariosa ATCC 17931]
Length = 445
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 72/453 (15%), Positives = 170/453 (37%), Gaps = 24/453 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + +++V +P + +++ + N+ GFR GK+P I+ G
Sbjct: 14 KTAVEKLNPTLAKIEVEVPFAEFKSYLDRTYKNLAQQINVPGFRKGKLPKQLIEQRTGYD 73
Query: 62 ILSET-IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E +++ + + + L + + +P + + + + D+KL ++ +
Sbjct: 74 YIVEASLNDALNDFYSQALGENELSPLAQPELDVQSQ-----PTVNDREADVKLNITVTV 128
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+IE+ +++ ++V D +V ++ ++ + + + + E + D VT+D T
Sbjct: 129 RPEIELPNYEGIEVEVDEIKVTAEDEEQALEALRERFGTLKNVERPAAKNDFVTIDITAE 188
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+D ++ + ++ + +GS + E L+GL G+ E S D AG+
Sbjct: 189 IDGQEID--AANDLSYQIGSGTMVDGIDEALIGLSAGEDATFETTL----SGGDHAGEDA 242
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + V V+++ A F++ ++ ++ + + + ++L
Sbjct: 243 TIKVKLSAVKERELPEVDDEFAQLASEFDTVDELKADMKNQVAEAKVSEQGAQARDKVLA 302
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ VPE ++E + N D EE Q +
Sbjct: 303 KLIEMIEVPVPEKVIEEQLEQHF----------NNPEAGEDHDTEEHRQEVRENTETAFK 352
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+VL I + +EV + EM + + ++ + L +
Sbjct: 353 NEMVLDAIADAEEVEVNQNEMINYIITMSSQYGMDPNQFAQMLDGS-GQAGMLVGEVRRS 411
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
K + +LK + D K L SE ++
Sbjct: 412 KALGEVLKKAVVKDTKGKAVDLSKFLSEGEEDE 444
>gi|332366226|gb|EGJ43981.1| trigger factor [Streptococcus sanguinis SK355]
Length = 427
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYNDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P +V E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMVHEEVHRAVNEFLGNMQRQGISPDMYFQITGTSQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASAEEIEAEVTSLATDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|224438106|ref|ZP_03659041.1| trigger factor [Helicobacter cinaedi CCUG 18818]
gi|313144546|ref|ZP_07806739.1| trigger factor [Helicobacter cinaedi CCUG 18818]
gi|313129577|gb|EFR47194.1| trigger factor [Helicobacter cinaedi CCUG 18818]
Length = 460
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 86/471 (18%), Positives = 201/471 (42%), Gaps = 22/471 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K + ++ I ++L + F++ I+ I I GFR GKVP IK+ Y
Sbjct: 1 MNFTTKRTNNANAIINGSIAQSKLEEKFDKVIKKIAQSVKIDGFRKGKVPAQVIKARYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERA---AMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + E I++++ L + + P I + D I+
Sbjct: 61 QVEQDAQQEAIQDLLDLALKELNVAPNSLIGNPMILKFDKNEDKIDLEIK---------- 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTV 175
I P E + + + + + +ID ++AEIAK+ + D +
Sbjct: 111 ISITPSFETDNVEKYVPEVQLEAITKAQIDERLAEIAKSRAPLSEITENRALAKDDTANI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ VD E +N ++GS + L+G+K G+++ I+ FPE++ L
Sbjct: 171 DFEGFVDGKAFEGGKGENFNLVIGSNQFIPGFEDTLIGMKKGEKRSIDVTFPENYQATHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQKV 293
AGKK + + ++ ++ ++++ A + S +++ + ++++ + + K
Sbjct: 231 AGKKAKFDVTLHKILQKDSTKIDDEFAKSIAGVESSLESLKDMIKEQLEMEQKTELYNKE 290
Query: 294 -KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQYYH 351
K ++++ + +FD+PE +VE E + + + +++ K +N ++ + +
Sbjct: 291 LKERLVEALLKNISFDLPELIVEQEMDILFRNALSQLAPEEIEKMKNNQEEAKKVRETHR 350
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A + V ++ + ++ NI + + E+ +Y + + K++L+++Q+ N +
Sbjct: 351 DEACKSVQITFIMDKLAKQYNIVIQDNEVLQTIYYEAMMMGQNPKEVLEYYQQN-NLVPA 409
Query: 412 LRAPIFEDKVIDHILKS--VQIVDRKVTFDQLFDNSSESSPEKLLDKSSKV 460
++ + ED+V+ ++L + ++ T S++ K
Sbjct: 410 IKMTMIEDRVLHYLLNEKFAKSKEKGTTSKADSKAESKADSGKTESSKKTK 460
>gi|325697520|gb|EGD39406.1| trigger factor [Streptococcus sanguinis SK160]
Length = 427
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEASKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYNDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P +V E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMVHEEVHRAVNEFLGNMQRQGISPDMYFQITGTSQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASAEEIEAEVTSLATDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|224540967|ref|ZP_03681506.1| hypothetical protein CATMIT_00118 [Catenibacterium mitsuokai DSM
15897]
gi|224526118|gb|EEF95223.1| hypothetical protein CATMIT_00118 [Catenibacterium mitsuokai DSM
15897]
Length = 426
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 83/439 (18%), Positives = 181/439 (41%), Gaps = 22/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M K E E+ + + + + + + + GFR G P + IK+ G
Sbjct: 1 MNTEVKKLEKSMVEIKAVFDTEEWAAAQEKALNKLAGSVKLDGFRKGHAPKNLIKAKIGA 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
K++ + ++EI+ E +I + +P+ + + +L++ +
Sbjct: 61 KALREQAVEEILSENYAKIFVDNNVTPVAQPTANVVKST----------ETELEVTFTCP 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P+ E+ + L+V + V +K+++ ++ + K +E E GD +DY
Sbjct: 111 VKPEFELGEYKGLEVKKTQVRVTKKDVEERLNDYQKQFAELVVKEEGTVEEGDTAVIDYE 170
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVG+ G++KEI FP+++ DLAG
Sbjct: 171 GFKDGVAFEGGKAENYSLEIGSHSFIPGFEEGLVGMTAGEEKEINLTFPKEYHAADLAGA 230
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG---FESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+V + E+ + + ++++LA + E+ ++ +I+ + K
Sbjct: 231 EVVFKVKVHEIKAKVLPEIDDELAKDVNIEGVETLEQLQEKIKDQIRTMKKAEAENKFNE 290
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ----NVDSIDEEDLQYYH 351
+++ + T DVP+++V++E I+ ++ +S + ++
Sbjct: 291 EVIKAVVANNTIDVPDAMVDSEVMNIINEINQNLSQQGLNIELYTKMTGKTMDDIKADVK 350
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ RV ++L I + NIEVT+ EM+ + + + +++
Sbjct: 351 DQAEERVKLNLILDKIVKAENIEVTDAEMEDEMKEIATYYNMPLEEVKKVLG---GQEHV 407
Query: 412 LRAPIFEDKVIDHILKSVQ 430
L+ + K + I +V+
Sbjct: 408 LKGDLTHRKALQLIKDNVK 426
>gi|28211968|ref|NP_782912.1| trigger factor [Clostridium tetani E88]
gi|28204411|gb|AAO36849.1| trigger factor [Clostridium tetani E88]
Length = 438
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 90/441 (20%), Positives = 198/441 (44%), Gaps = 18/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E +L+V + + + ++ + K N+ GFR GK P+S IK YG+
Sbjct: 8 MKVSMEKIENNVVKLEVTVEAKKFNEAMKKSYAKNVKKFNVPGFRKGKAPMSIIKRYYGE 67
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + I+ + P+ L +++ + P I I E I D
Sbjct: 68 TVFYEDAINICCDDTYPKALEEKEIKPVDYPQIDIVE---------IGEGKDFVYTAQVT 118
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV--AFEVKETESEIGDKVTVDY 177
++P++E+ + L+ + +V +++++ + E+ + N + E E G+ +D+
Sbjct: 119 VMPEVELGEYKGLEAKKVSYDVKDEDVENTLKEMQQRNARIQTKEDEEAIEKGNIAVIDF 178
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD V E + +GS + L+G K G++KE++ FPE++ ++L G
Sbjct: 179 KGYVDEVPFEGGEGYDYSLEIGSGTFIDNFEDQLIGAKKGEEKEVKVKFPEEYGSEELNG 238
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ + +IKE+ ++++ F++ ++ KIK+ ++ + + +
Sbjct: 239 KEAKFQVTIKEIKVKELPAIDDEFVKEVSEFDTLDELKEDIKAKIKEGNDKRAKAEYEET 298
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+++ D+PE +VENE N +L+ + ++ + +E+ +Y
Sbjct: 299 VINLACENAKVDIPEVMVENEINNMLKDLEMKLRYQGIDLETYYQYTNSTEEKVREYMKE 358
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A +RV T +VL + + +E T+EE+ + ++ E + A L
Sbjct: 359 AATKRVKTDLVLAEVAKAEKLEATDEEIMDRAKEMAKQYGSGELEKTAKLLADSQN-ALL 417
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+A + +KV+ I+ + + ++
Sbjct: 418 KADVINEKVVKLIVDNSKEIE 438
>gi|73748508|ref|YP_307747.1| trigger factor [Dehalococcoides sp. CBDB1]
gi|119370894|sp|Q3ZX83|TIG_DEHSC RecName: Full=Trigger factor; Short=TF
gi|73660224|emb|CAI82831.1| trigger factor [Dehalococcoides sp. CBDB1]
Length = 447
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 85/473 (17%), Positives = 186/473 (39%), Gaps = 34/473 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V +K EG + + V + S + + ++ + K I GFR GK P + +
Sbjct: 1 MKVTDKKIEGCQASITVEMDSTEVEEGLSKTYRRLVKKVEIPGFRKGKAPRDVFEKYVSR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E +D+I+ E + + + + P + + T
Sbjct: 61 EKMLDELVDDIVPEACQKAIQDEEIKPFATPKVAMVT------------TDPFVFSARIP 108
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P +E+ + ++ T++ E+ E+ ID + ++ +E E ++GD + +
Sbjct: 109 LPPVVELGDYKTIRATKETVEIAEENIDTVVDQVLHQRATWETAERPVKMGDMLLMQVES 168
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+++ ++ + + LV + G+ KE FPEDH+ +LAGK
Sbjct: 169 TLNGEPYLNREDMQYSVREEAIYPAPGFGDCLVDMVAGEPKEFSIVFPEDHARAELAGKT 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+++E+ +N+ A F + S +R + ++ + + K + QI
Sbjct: 229 AAFKVTVREIKEEKLPELNDAFAHELNPEFNTLSELRQRIRENMQDRQDDKAQAKFEDQI 288
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV-----DSIDEEDLQYYHM 352
++ + D PE +VE E + I+++ + S + + E+ Q Y
Sbjct: 289 VEALIKMSKIDYPEVMVEAELDQIIEQQLQRLQSNVKSPEEFRAMLSQMTPEDMQQRYRP 348
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
LA++RV + +VLG + N+ +EE+ + + + + +++ + + L
Sbjct: 349 LAEQRVASSLVLGKLATTENLVPNDEEVDAEIEKLITDAGDKKEEEKALYNQS-ETRDRL 407
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ K + I D++ + + E D+ K E
Sbjct: 408 IQLLTARKTMAFI-------------DEIALQPALEAVEPKADEDEKTEEADK 447
>gi|325689047|gb|EGD31055.1| trigger factor [Streptococcus sanguinis SK115]
Length = 427
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYNDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P ++ E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMIHEEVHRAVNEFLGNMQRQGISPDMYFQITGTSQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASAEEIEAEVTSLATDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|209525238|ref|ZP_03273780.1| trigger factor [Arthrospira maxima CS-328]
gi|209494253|gb|EDZ94566.1| trigger factor [Arthrospira maxima CS-328]
Length = 466
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 74/443 (16%), Positives = 175/443 (39%), Gaps = 21/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + LD+ I ++ + I ANI GFR GKVP + G
Sbjct: 1 MKVTQEKLPASQVGLDIEISPEISKKAYEKVINQYARSANIPGFRKGKVPRHILVQRLGP 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
S I + +D++++E P+I+ + A + G + E + ++ + D
Sbjct: 61 SRIKAAALDDLMQEYFPKIVEEEKIPAIGSFEVI---GNIEELIEQYEPGQPITIKAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI-------GDK 172
+ P+++++ + D QV + + D +++D + E K
Sbjct: 118 VEPEVKLNKYQDFQVQAEEVKFDPQQVDEILERERVKMATLVPVENRPAQKGDTAYVDFK 177
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
T + + +E N Q + TE + G+ G+ KE+ FP D+
Sbjct: 178 GYFTPTGATEPQEIEGGQGDNYQVELTEGQFIPGFTEGIEGMSPGETKELNIEFPADYGK 237
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQ 291
+LAG N ++ E+ +++D A FE+ + +R ++ ++
Sbjct: 238 PELAGCPATFNITLLELKEKELPELDDDFAAEVSEFETLAELRESLEKRFQEEKAEQTTA 297
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQY 349
+ + + + + ++PE+L+ E + +L + ++S+ + + + + ++
Sbjct: 298 NKHKALAEALVAEMEVELPETLIREEVDRLLTQQAMQLSNMGIDLKQLFNSETVPRMREH 357
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A ++ + + + ++ +I +TEEE+Q+ + + + G + +
Sbjct: 358 LRPDAIAQLKETLAIKEVAKQQSITITEEEIQAKSEEMMEQLQGQDVNL-------DRLR 410
Query: 410 AELRAPIFEDKVIDHILKSVQIV 432
+ + K + + I
Sbjct: 411 MVVTDDLISQKTYQWLEEHSTIE 433
>gi|332359853|gb|EGJ37667.1| trigger factor [Streptococcus sanguinis SK1056]
Length = 427
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E + V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYKDAVEAV 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P ++ E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMIHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFESSAEEIEAEVTSLASDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|327462833|gb|EGF09155.1| trigger factor [Streptococcus sanguinis SK1057]
Length = 427
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELAEAKETAYNDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P +V E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMVHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASAEEIEAEVTSLATDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|317495978|ref|ZP_07954340.1| hypothetical protein HMPREF0432_00944 [Gemella moribillum M424]
gi|316913882|gb|EFV35366.1| hypothetical protein HMPREF0432_00944 [Gemella moribillum M424]
Length = 422
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 70/430 (16%), Positives = 165/430 (38%), Gaps = 22/430 (5%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSE 65
E K + + + + N GFR GK+P + +YG+ + +
Sbjct: 6 NQEDGKVVISFSASKEEFAKGLDSAFKRAVKRVNAPGFRKGKLPRAVFNKMYGEEALYQD 65
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
+D ++ + + + P I + E + + + P +E
Sbjct: 66 AVDAVLPAAYTKAIDELKVSPLAMPDIDVKEISKE---------NGVSFEAVVTVKPNVE 116
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ + L + ++ EV + +++ ++ + N +++KE E++ GD V +D+ + +
Sbjct: 117 LGEYKHLGIKKEEVEVTDADVEERLERLLSNQAEWQIKEGEAKKGDIVVIDFKGFIGDEA 176
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
E K + +GS + L G E+ FPE++ + DLAGK+ + +
Sbjct: 177 FEGGEAKGYELELGSGSFIPGFEDQLEGKVAPVDTEVNVTFPENYQVADLAGKEAKFEVT 236
Query: 246 IKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
I +V + + ++ E + + + +IK E + +++
Sbjct: 237 IHDVKEKVLPELTDEFVKEFSKEAASTVAEYKEKLRGEIKVQKEEAATKAYSDKVISTAV 296
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKRRV 358
VP L++ E N + ++ +S + + +E A+ ++
Sbjct: 297 ENAKLTVPTKLIDQEVNSMFEQFAGNLSRQGLSFELYEQFTGKGADELKAEMRSDAENKI 356
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T VLG I E +EVT+ ++ + + + + E+ + + +LR +
Sbjct: 357 KTSFVLGEIAEVEKVEVTDADIDAEVKELATMYNMTEEGVRTRIS-----VEDLRGELII 411
Query: 419 DKVIDHILKS 428
K ++ + ++
Sbjct: 412 QKTVEFLKEN 421
>gi|327468294|gb|EGF13779.1| trigger factor [Streptococcus sanguinis SK330]
Length = 427
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E + V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYKDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P +V E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMVHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + ++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASAEEIEAEVTSLATDYNMEVDRVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|323340665|ref|ZP_08080917.1| trigger factor [Lactobacillus ruminis ATCC 25644]
gi|323091788|gb|EFZ34408.1| trigger factor [Lactobacillus ruminis ATCC 25644]
Length = 431
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 84/444 (18%), Positives = 184/444 (41%), Gaps = 24/444 (5%)
Query: 1 MQVIEKFSEG-LKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M V + EG +L I ++ + + ++ N+ GFR GKVP ++G
Sbjct: 1 MSVKWEKEEGTNNGKLTFEIEPAKIKEGLDVAFNRVKKSLNVPGFRKGKVPRQIFNKMFG 60
Query: 60 KS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + + ++ ++ E + + D + +P I + E D L
Sbjct: 61 EESLYQDALNAVLPEAYTNAVKESDIKPVDQPEIDVESMEKDSA---------WVLTAKV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDY 177
+ P++E+ + L+V EV ++++D ++ + + ++ +E GD V +D+
Sbjct: 112 TVEPEVELGEYKGLEVAAQSTEVTDEDVDAELNRMREQQAELVLKEDAPAEKGDTVVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
++D V E +N +GS + LVG K + +++ FPED+ +DL G
Sbjct: 172 NGTIDGVPFEGGKSENYSLELGSNTFIPGFEDQLVGHKADEDVDVKVTFPEDYQAEDLQG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K+ I EV + +++D A E+ ++ ++++ + + +KV+
Sbjct: 232 KEAVFATKIHEVKAKELPELDDDFAKDVDEEVETLVELKAKVREELENNKKEAAHEKVQD 291
Query: 296 QILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYY 350
+ ++ ++P +++ + + +++ M + +E+ + +
Sbjct: 292 EAIEKAVENAKIGEIPAVMIDEDVHRQMEQYLGGMQQQGISADMYYKLTGTTEEDLHKQF 351
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A +RV T +VL I + TEEE+ + + ++ EK +
Sbjct: 352 EEGAAKRVKTNLVLEAIVAAEGVTATEEEIDKEIKELAAQYGMDEKAVRSALSDD----- 406
Query: 411 ELRAPIFEDKVIDHILKSVQIVDR 434
L I KV+D I S + V++
Sbjct: 407 MLNHDISIRKVVDEITDSAKQVEK 430
>gi|328948165|ref|YP_004365502.1| Trigger factor [Treponema succinifaciens DSM 2489]
gi|328448489|gb|AEB14205.1| Trigger factor [Treponema succinifaciens DSM 2489]
Length = 456
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 85/457 (18%), Positives = 197/457 (43%), Gaps = 14/457 (3%)
Query: 1 MQVIEK--FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLY 58
M+V ++ E +L I + +N+ I + GFR G VP+ ++ Y
Sbjct: 1 MKVTKEISKLENSAVKLTATIAKEDVVSGYNKNISKYAKNVQLPGFRKGHVPVKVLEQKY 60
Query: 59 GKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
G S+ E + ++I E + +I ++ + + RP DL + Y
Sbjct: 61 GDSLKQEVLADLIDESLNQIFAEEESKDI-RPLPYTQPRLDGDKLPEFSTDKDLTFSVVY 119
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
D+ P +E+ F ++V + E+ EKE++ ++ I + N K+ + V
Sbjct: 120 DVFPSVEVKDFSKIEVKEPQVEIGEKELNEELKAIQERNAVVIDKKEGEPVEKDNIVTID 179
Query: 179 VS---VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
+ ++ F VG+ + + + +VG+K + KEI + + KDL
Sbjct: 180 YKELDDSGAAIPGSEREGFVFTVGTGENIYKIDDEIVGMKKDETKEISKTYDAKEENKDL 239
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
AGK +++ ++K + ++++LA +++ ++ S+ ++ + +
Sbjct: 240 AGKTKKISVTVKAIKLRNLPALDDELAQDVSEKYKTLDDLKKDISKGLESAKNRKIAELK 299
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQY 349
+ +L+ + K +P+S+++ E + + + + ++ + + E L
Sbjct: 300 SQSLLEQLVEKNPIVLPKSMIQAEMESRWRMMAQQFQTTPEQLEKMISASGQSKENMLTQ 359
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A++ + + +++ + + NI VT EE+++ + +++ +H+ + A
Sbjct: 360 WTGDAEKMLKSRLIVDALIREKNIAVTPEEVEAEFAKIADESGSTIEEVKEHY-EDARAK 418
Query: 410 AELRAPIFEDKVIDHILKSVQIVD-RKVTFDQLFDNS 445
+ I E+K+ D + K V++ KV F LF N+
Sbjct: 419 EYIIDEIKENKLYDELYKQVKVSKGDKVKFADLFKNN 455
>gi|284052028|ref|ZP_06382238.1| trigger factor [Arthrospira platensis str. Paraca]
gi|291569896|dbj|BAI92168.1| trigger factor [Arthrospira platensis NIES-39]
Length = 466
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 78/444 (17%), Positives = 176/444 (39%), Gaps = 23/444 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + LD+ I +++ + I ANI GFR GKVP + G
Sbjct: 1 MKVTQEKLPASQIGLDIEISPEISKNAYEKVINQYARSANIPGFRKGKVPRHILVQRLGA 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
S I + +D++++E P+I+ + A + G + E + ++ + D
Sbjct: 61 SRIKAAALDDLMQEYFPKIVEEEKIPAIGSFEVV---GNIEELIEQYEPGQPITIKAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI-------GDK 172
+ P+++++ + D QV + + D +++D + E K
Sbjct: 118 VEPEVKLNKYQDFQVQAEEVKFDPQQVDEILERERVKMATLVPVEKRPAQKGDTAYVDFK 177
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
+ + +E N Q + TE + G+ G+ KE+ FP D+
Sbjct: 178 GYFTPKGATEPEEIEGGQGDNYQVELTEGQFIPGFTEGIEGMSPGETKELNIEFPADYGK 237
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQ 291
+LAG ++ E+ +++D A FE+ + +R ++ ++
Sbjct: 238 PELAGCPATFTITLLELKEKELPELDDDFAAEVSEFETLAELRESLEKRFQEEKAEQTTS 297
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQY 349
+ + + + + ++PE+LV+ E + +L + ++S+ + + + + ++
Sbjct: 298 NKHKALAEALVAEMEVELPETLVKEEVDRLLTQQAMQLSNMGIDLKQLFNSETVPRMREH 357
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A ++ + + + ++ +I VTEEE+Q+ + + + G E P L
Sbjct: 358 LRPDAIAQLKETLAIKEVAKQQSITVTEEEIQAKCEEMMEQLQGQEV--------NPERL 409
Query: 410 AELR-APIFEDKVIDHILKSVQIV 432
+ + K I + I
Sbjct: 410 RMVVTDDLISKKTYQWIEEHSTIE 433
>gi|315641098|ref|ZP_07896177.1| trigger factor [Enterococcus italicus DSM 15952]
gi|315483106|gb|EFU73623.1| trigger factor [Enterococcus italicus DSM 15952]
Length = 426
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 73/439 (16%), Positives = 167/439 (38%), Gaps = 26/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L I + + ++ + N+ GFR GKV + +YG+
Sbjct: 1 MTAKWEKKGTNDGVLTFSIANEEIQKGLTTAFNKVKGQLNVPGFRKGKVSRTVFNRMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + +P I + E +
Sbjct: 61 EALYEDALNAVLPTAYEAAVLEAGIDPVSQPKIDVKSM---------EKGEAWTIEAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + +L V + EV E++++ ++ + + +KE + GD V +D+
Sbjct: 112 VKPEVKLGEYKNLTVAKQDREVTEEDVENRLKAVQEQQAELVIKEDAAAEGDTVVIDFEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
V++ E N +GS + LVG K GD +++ FPE++ +DLAGK+
Sbjct: 172 FVNDEAFEGGKGDNYSLELGSHSFIPGFEDQLVGSKAGDSLDVKVTFPEEYQAEDLAGKE 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVRQKVK 294
++ EV ++++ A + + +K + + +
Sbjct: 232 AVFKVTVHEVKGKELPELDDEFAK--DVDDSVSSLAELKEKYRTELTEGKEKAAKEAVEE 289
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYY 350
I ++N ++P +V +E + + + M Q +E+ + +
Sbjct: 290 AAIKQAVANAEIVELPHVMVHDEVHRAMDEFLNNMQRQGIDPQMYYQLTGSTEEDLHKQF 349
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A RV T +V+ I + +E TEEE+ + + + + E ++ +
Sbjct: 350 EGEADERVKTNLVIEAIAKAEGLEATEEEIANEIKELSEAYNMPEAQIKRVLTED----- 404
Query: 411 ELRAPIFEDKVIDHILKSV 429
L+ + K +D + +
Sbjct: 405 MLKHDVTMKKAVDLVTSTA 423
>gi|327488886|gb|EGF20684.1| trigger factor [Streptococcus sanguinis SK1058]
Length = 427
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E + V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYKDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P +V E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMVHEEVHRAVNEFLGNMQRQGISPDMYFQITGTSQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASAEEIEAEVTSLATDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|126659248|ref|ZP_01730385.1| trigger factor [Cyanothece sp. CCY0110]
gi|126619447|gb|EAZ90179.1| trigger factor [Cyanothece sp. CCY0110]
Length = 460
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 74/446 (16%), Positives = 177/446 (39%), Gaps = 27/446 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+V ++ + L++ IP+ ++ ++ + ANI GFR GKVP + G
Sbjct: 1 MKVTQEKLPDSQIGLEIEIPAETGKKAYETKVNTLARTANIPGFRKGKVPRPILLQRLGT 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ I + T++E++++ + + L + + ++ D + + D
Sbjct: 61 RYIKAVTLEELVQKTLEKALEQESIESIGNYTL---RSSLDELIEKFKPGEAFTFLAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-------DK 172
+ P +E+ + L + + D ++++ E + E K
Sbjct: 118 VPPTVELGDYQALSIKAEETVYDPQQLEDWFKERQEKLATLVPVEDRGAEMGDVAIVDYK 177
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
+ +E + + + E +VG+K + KE+ FP+D+
Sbjct: 178 GVSTPEGEGEGEPIEGVEGTDFRVDLEPGRFIEGMVEGIVGMKPEETKELPLTFPDDYPR 237
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQ 291
+DLAGK V ++KE+ + +++D A +E+ + +R ++ K+ +E +Q
Sbjct: 238 EDLAGKPVTFTITLKELKAKELPELDDDFADEVSEYETIAELRESLEKEFKESAENETKQ 297
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED--LQY 349
+ I ++N T D+P++LV++E +L + +M + + + +
Sbjct: 298 SIHTAITSELTNVCTVDLPDTLVQDEVTRVLTQTAMQMEQMGIDLGQLFTQENLPKLREN 357
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQS---ALYQQLGRFPGHEKKMLDHFQKYP 406
A R+ ++L I + +I + E++ + +QL K+ +
Sbjct: 358 ARPEALERLKQTLILQEIAKVESITLEASEIEERSNEIKEQLQGQEVDPDKLRE------ 411
Query: 407 NALAELRAPIFEDKVIDHILKSVQIV 432
+ + +K ++ + + +
Sbjct: 412 ----VVEEQLVTEKTLNWLQEKATVE 433
>gi|323350450|ref|ZP_08086113.1| trigger factor [Streptococcus sanguinis VMC66]
gi|322123387|gb|EFX95065.1| trigger factor [Streptococcus sanguinis VMC66]
Length = 427
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 78/441 (17%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFKSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEGQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E + ++
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYKDAIEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P +V E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMVHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASAEEIEAEVTSLATDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|58584811|ref|YP_198384.1| FKBP-type peptidyl-prolyl cis-trans isomerase, TIG [Wolbachia
endosymbiont strain TRS of Brugia malayi]
gi|67461609|sp|Q5GS82|TIG_WOLTR RecName: Full=Trigger factor; Short=TF
gi|58419127|gb|AAW71142.1| FKBP-type peptidyl-prolyl cis-trans isomerase, tig [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 447
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 86/441 (19%), Positives = 189/441 (42%), Gaps = 25/441 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
E + LK E ++ + SN + N R+++I A + GFR GK+P + + Y L
Sbjct: 22 KELSIDKLKHEYEITVGSNYIEQKVNSRLQEIAKNAKLPGFRSGKMPYDLVVTNYKNEAL 81
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
++ I +++ K + ++ + P + I + G + +LS++ +P+
Sbjct: 82 EYVVNSTIDYCSSDLMKKIEVKSHIYPKVDIMSLPNLNEEG---EKSNFVYKLSFESMPE 138
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---EIGDKVTVDYTVS 180
+ + D + + + ++E++I + I +F + S + GDK+ +D+
Sbjct: 139 VPVIDLDKINLKKVEARIEEEDIKGFVDSIKTRFPSFVSVDDASYQAKNGDKLVIDFEGR 198
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ N + + S KN + +GS + L G+K G+ K + FPED+ LAG++
Sbjct: 199 IRNKLFQGGSNKNFKVTLGSGTFINGFENQLTGMKKGETKSFKLKFPEDYQTISLAGQEA 258
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ + ++ ++++A ++GF S+++ + I E + +K+++ DY
Sbjct: 259 NFSVRVNDIQVAEDFGGDDEMAKKIGFRDCSSLKNHAKEVIGGQCEEMRDLLIKKELFDY 318
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+FD+P +V E + A+RRV
Sbjct: 319 LDANYSFDLPTDVVRQEQQR-------------------VERELGSKDDSCKEAERRVKL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
++ ++ I +T+ ++ + + Q ++ HF+ +R E K
Sbjct: 360 AMLFMKFSTEHKISLTQNDILNVIVNQYISKDVPFDRVFKHFKSDRQFQELVRGQALEHK 419
Query: 421 VIDHILKSVQIVDRKVTFDQL 441
V +I++ V ++ V+ +L
Sbjct: 420 VTSYIIEKVNKEEQIVSVKEL 440
>gi|325686849|gb|EGD28874.1| trigger factor [Streptococcus sanguinis SK72]
Length = 427
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 175/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEASKEVTDAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E + V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYKDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P ++ E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMIHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASAEEIEAEVTSLATDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|227500201|ref|ZP_03930270.1| peptidylprolyl isomerase [Anaerococcus tetradius ATCC 35098]
gi|227217723|gb|EEI83027.1| peptidylprolyl isomerase [Anaerococcus tetradius ATCC 35098]
Length = 454
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 80/432 (18%), Positives = 177/432 (40%), Gaps = 16/432 (3%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-LS 64
K E + + +P + + + + +S+ + GFRPG V ++ +YG I
Sbjct: 5 KSHENNIAKFEFDVPYDEFKKATDTVYKRNKSRYRVDGFRPGHVSRKVLEKMYGPEIFYD 64
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
E I + E + + + +PS+ +++ IE D+ ++ + P
Sbjct: 65 EAIKLVFPEPYEKAVEELALEVIDQPSVDLDD---------IEVGKDITFKVEVETKPHP 115
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYTVSVDN 183
+ + L V + EV +++I+ ++ + + N E ++E+GD V +D+ ++
Sbjct: 116 VLGDYSKLIVEEVPVEVTDEDIEAELKKQQEENARLIPVEDGKAEMGDTVNIDFDGFLEG 175
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E +N ++GS + +VG GD+ ++ FPED+ K+ GK +
Sbjct: 176 ERFEGGKAENYDLVLGSNTFIKGFEDQVVGHLAGDKFDVNVTFPEDYQAKEFQGKDAKFE 235
Query: 244 FSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
I + ++++ A F++ ++ +K+ + E + ++ Q ++ +
Sbjct: 236 VEINSITRKELPKLDDEFAKDISEFDTLEELKNSLKEKLVKEKEERAKSIIQNQAVEALV 295
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHMLAKRRV 358
K P LV +E + LQ + + + + D + Y A+ RV
Sbjct: 296 KKSEVSAPNGLVNSEIDFELQNLDQRLQQMGISLAQYVEMTKMDINQIREQYRAQAEARV 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+V+ + K NIEVT+EE ++ + + + +K+ + L I
Sbjct: 356 KANLVIDEVALKENIEVTDEEKEAEINEAAENYGVEDKEKFKELFAKNVSDKTLEENIKR 415
Query: 419 DKVIDHILKSVQ 430
K ++ + +
Sbjct: 416 RKAVELLASKAE 427
>gi|290579602|ref|YP_003483994.1| peptidyl-prolyl isomerase [Streptococcus mutans NN2025]
gi|254996501|dbj|BAH87102.1| peptidyl-prolyl isomerase [Streptococcus mutans NN2025]
Length = 427
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 178/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ ++ GFR G +P + +G+
Sbjct: 1 MSTSFENKATNRGVVTFTISQDKIKPALDQAFNKVKKDLTAPGFRKGHMPRTVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++ I+ E +++ +P + + E D ++
Sbjct: 61 EALYEEALNSILPAAYEEAVAELKLDVVTQPKVDVKSM---------EKGKDWEITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQDI-CEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVEESKEVTDAEVDEKIERERNNLAELVLKEDAAVEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K G+ ++ FPED+ DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGKKAGETVKVNVTFPEDYQSADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DATFVTTIHEVKAKEVPELDDELAKDIDEEVETLDELKAKYRKELEATKETAYNDAVEAA 291
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+D ++N ++PE ++ +E +Q+ M S+ +E+ + Y
Sbjct: 292 AIDLAVANAEIVELPEEMIHDEVQRAMQEFMGNMQRQGISSEMYFQLTGTTEEDLRKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ + + E T+EE++ + + +++
Sbjct: 352 ADADKRVKTNLVIEAVAKAEGFEATDEEIEKEISDLATEYKMEAEQVRSLLSPD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I S ++
Sbjct: 407 LKHDIAMKKAVNVITDSAKVK 427
>gi|148657761|ref|YP_001277966.1| trigger factor [Roseiflexus sp. RS-1]
gi|166229930|sp|A5UZG3|TIG_ROSS1 RecName: Full=Trigger factor; Short=TF
gi|148569871|gb|ABQ92016.1| trigger factor [Roseiflexus sp. RS-1]
Length = 539
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 73/482 (15%), Positives = 169/482 (35%), Gaps = 25/482 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + EL V + ++ + + + K NI GFR GK P +++ +G+
Sbjct: 1 MKVTTEKKPRSILELTVELDKQQIEKALDRAARRMSQKYNIPGFRKGKAPRFIVENYFGR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E D++I++ + L + + +T + +
Sbjct: 61 EALLEEASDDLIQKAFQDALKQEGIEPYAQAHLTDVNLT----------EAPYRFTVEVP 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT- 178
+ P + + + + V +I EV ++ ++ M +V + +
Sbjct: 111 VAPTVVLPDYRAIHVPLEIEEVTDETVNHAMEIRRDRHVVLRALDEPRPAQPGDQLTVQI 170
Query: 179 -----VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
N E + ++ + E LVG+ ++ +DH +
Sbjct: 171 ETFVDGEPLNPRAEGEDIPQSTLVLDPERIVPGLYEALVGVSPNTMVDVTVRMSDDHENE 230
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
+ G+ VR ++ +V L + A+ + +R ++ + + V
Sbjct: 231 RVRGRDVRFVVNVLDVQERLLPEWDELPALENFEGTLDELREKTRNELIEAARKNAEDDV 290
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQY 349
+ + + TFD+P++L+ E + IL++ E ++ + ++ ++
Sbjct: 291 FVEYVRQVIAATTFDLPDALIVREADSILREREAEFERYGISAEQIYAAQGKKRDDLIEE 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+A+ R G+VL I + + E E+ + + + +
Sbjct: 351 LKPVAEERAKRGLVLREIAKAEGLAPDESEIAREVEDIVASMEEERRDSARTLLET-ELR 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+ A I + K+ IL +F+Q + S PE ++ + AP
Sbjct: 410 PFVVAGIVDRKLRRRILAIAT---GDPSFEQAASPEAASEPESADGGEAQTVDTHIDSAP 466
Query: 470 SE 471
+
Sbjct: 467 VD 468
>gi|312880127|ref|ZP_07739927.1| trigger factor [Aminomonas paucivorans DSM 12260]
gi|310783418|gb|EFQ23816.1| trigger factor [Aminomonas paucivorans DSM 12260]
Length = 458
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 74/468 (15%), Positives = 181/468 (38%), Gaps = 23/468 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + ++ + ++ D+ KAN+KGFR G VP ++ +GK
Sbjct: 1 MKSEILSQDRNILVIKSEVEADSFAKAVSDAARDLSRKANLKGFRKGHVPRKTLELFFGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++ ++ +V E+L + D P I + G +E L + +++
Sbjct: 61 ETLYQEALERLLPRVVDELLQEYDLVLIDEPKIQM---------GTVEEGKPLDVEFTFE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV----TV 175
+ P++ + + + L T+ + VDE +D+Q+ ++ + N E + + +
Sbjct: 112 VRPEVTLPNPESLTATRSLHTVDEDLVDQQIQKVLEMNATLHPLEEQRTVTPEDIVDLRY 171
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
+ V ++ + + + L E E L G G+ +++ D+ +
Sbjct: 172 NSYVLEGEKQESLETDQKSPVELQNPSLRREIAEALAGKSVGETFDLDLPVDSDYRDPRV 231
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDL---AVRLGFESESAMRGLCSQKIKQHSEFLVRQK 292
AGK VR + +++ + + ++++ + + A R + ++ +
Sbjct: 232 AGKTVRYSMTVEGLLQRVVPALDDETSHKLTKGECPTVDAFRTRVRRDLESAAADHATDS 291
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSS-----ANQKSQNVDSIDEEDL 347
++ + + + D+P+SLV+ + + + Q + + L
Sbjct: 292 LRASAVKALCDGAQVDLPDSLVKRRTQELRKDQEERIKKETGLEWQSFIQQAGLEETQLL 351
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A+ V +VL ++ NI+ T EEM + ++
Sbjct: 352 ADLEVKAREDVKRSLVLEAWADQENIQWTPEEMNLEIQGMAKAMGVETDRLKSFILSNQE 411
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
E+ + + K +D ++ V++ DR+V + + + E
Sbjct: 412 RFGEIASKLRGRKAVDSLVSKVKVEDRQV-KEDFAEAQVTPAEEAPHA 458
>gi|322435046|ref|YP_004217258.1| trigger factor [Acidobacterium sp. MP5ACTX9]
gi|321162773|gb|ADW68478.1| trigger factor [Acidobacterium sp. MP5ACTX9]
Length = 478
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 76/440 (17%), Positives = 184/440 (41%), Gaps = 27/440 (6%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSE 65
+ L RE++V + ++ ++ SF ++ + A I GFR GKVP S IKS + K + E
Sbjct: 46 TMNPELMREINVEVDADTVSKSFRTVVKKYQKLARIPGFRVGKVPESVIKSRFAKEVRQE 105
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
+DE++ E + ++ +P +T + ++ L+ + ++++ P+I+
Sbjct: 106 VLDELVSERFRLAIVEQKLNPISQPQLT---------NLMLVDGQPLQFKAAFEVSPEID 156
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETE---------------SEIG 170
I+ +D + V + E+ + E ++ + ++ E + +
Sbjct: 157 IAGYDAVAVEKPSSELTDAEYKAELDRVLDSHGTVETIDEDRTLVDGDWAEIEFKGQIQD 216
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
TV + ++ E+ + ++V +G ++ ++ L G K G + E +P D
Sbjct: 217 VAQTVGEEGAANSEETEEITGEDVLIEIGGSNTLPAFSDALRGQKIGQEMTFEVTYPADF 276
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLV 289
LAG+ V+ + ++K + + + A + +E+ + + V
Sbjct: 277 GEPRLAGQTVKYDVTLKTIKKKTFPERDEEFAKQLGDYETWDEFETKLREHAADRKKVAV 336
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-EEDLQ 348
+ K ++L + K++F VPES V+ + + L + ++ ++++ +D
Sbjct: 337 ENQAKDKMLSEMIEKFSFPVPESFVQQQIDARLDRGLRALAQQGMTAEDMRKLDFGRLRA 396
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
A V ++L + E ++V +EE++ + + + + + +
Sbjct: 397 AQRDQAVAEVKASLILDRMAEAEGVQVEDEELEREIMMASLQAREPMETIRQRMVED-GS 455
Query: 409 LAELRAPIFEDKVIDHILKS 428
L +R + +K + +
Sbjct: 456 LERMREQMRREKTGAVVYEK 475
>gi|118574068|sp|Q891J6|TIG_CLOTE RecName: Full=Trigger factor; Short=TF
Length = 431
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 90/441 (20%), Positives = 198/441 (44%), Gaps = 18/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + E +L+V + + + ++ + K N+ GFR GK P+S IK YG+
Sbjct: 1 MKVSMEKIENNVVKLEVTVEAKKFNEAMKKSYAKNVKKFNVPGFRKGKAPMSIIKRYYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + I+ + P+ L +++ + P I I E I D
Sbjct: 61 TVFYEDAINICCDDTYPKALEEKEIKPVDYPQIDIVE---------IGEGKDFVYTAQVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV--AFEVKETESEIGDKVTVDY 177
++P++E+ + L+ + +V +++++ + E+ + N + E E G+ +D+
Sbjct: 112 VMPEVELGEYKGLEAKKVSYDVKDEDVENTLKEMQQRNARIQTKEDEEAIEKGNIAVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD V E + +GS + L+G K G++KE++ FPE++ ++L G
Sbjct: 172 KGYVDEVPFEGGEGYDYSLEIGSGTFIDNFEDQLIGAKKGEEKEVKVKFPEEYGSEELNG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ + +IKE+ ++++ F++ ++ KIK+ ++ + + +
Sbjct: 232 KEAKFQVTIKEIKVKELPAIDDEFVKEVSEFDTLDELKEDIKAKIKEGNDKRAKAEYEET 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHM 352
+++ D+PE +VENE N +L+ + ++ + +E+ +Y
Sbjct: 292 VINLACENAKVDIPEVMVENEINNMLKDLEMKLRYQGIDLETYYQYTNSTEEKVREYMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A +RV T +VL + + +E T+EE+ + ++ E + A L
Sbjct: 352 AATKRVKTDLVLAEVAKAEKLEATDEEIMDRAKEMAKQYGSGELEKTAKLLADSQN-ALL 410
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+A + +KV+ I+ + + ++
Sbjct: 411 KADVINEKVVKLIVDNSKEIE 431
>gi|118587401|ref|ZP_01544827.1| trigger factor [Oenococcus oeni ATCC BAA-1163]
gi|118432225|gb|EAV38965.1| trigger factor [Oenococcus oeni ATCC BAA-1163]
Length = 439
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 84/446 (18%), Positives = 177/446 (39%), Gaps = 26/446 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
K +G K L IP+ +++ ++ + K NI GFR G V + +G+
Sbjct: 8 NATFKAGKGNKGTLSFEIPAKQISSGIDQAFNKQKDKINIPGFRKGHVSKELFLARFGEE 67
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + ++ I+ +I + +++ D +P I ++ K+ +
Sbjct: 68 ALYEDALNAILPDIYDQAVNEADITVVGQPQI---------IPDDLKHGGPWKIHAEVTL 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
P +E+ + ++V ++ EV +KE++ ++ + K ++ SE GD V +D+
Sbjct: 119 APTVELGDYKGVEVEKESDEVSDKELNAELERLQKGEAELVPAKEDQVSEKGDTVVIDFD 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + +N +GS + LVG K GD +++ FP+D+ K+LAGK
Sbjct: 179 GSVDGKQFDGGKAQNFSLSLGSGQFIPGFEDQLVGHKAGDDVDVKVTFPKDYQAKNLAGK 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +I E+ ++N+ A S ++ +K+ + + +
Sbjct: 239 EAVFAVTIHELKKLETPALDNEFAKDVDDSVSSLEELKAKTKEKLAKDKAEKNKDAFEDA 298
Query: 297 ILDYIS---NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQY 349
+ + +PE ++ ++ + +Q ++ K + E+ Q
Sbjct: 299 AIQKVVDGAKINPEKLPEEMINDDVSRQMQTFFNNLAGQGVKPEMYFQITGTNQEQLKQQ 358
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A RV T +VL I I + EE+ + + E ++
Sbjct: 359 MTEGAPNRVKTNLVLEEIARVEKINPSNEEIDKEIKSLASEYNIKESEVEKSVSA----- 413
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRK 435
L + + ++ I+ S Q V++K
Sbjct: 414 GMLSHDLKVQQAVELIVNSAQAVEKK 439
>gi|306820817|ref|ZP_07454441.1| trigger factor [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304551135|gb|EFM39102.1| trigger factor [Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 428
Score = 167 bits (421), Expect = 4e-39, Method: Composition-based stats.
Identities = 90/437 (20%), Positives = 177/437 (40%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EG EL ++IPS NE +SK NI GFR GKVP + I YG+
Sbjct: 1 MSLDLIKKEGYNAELKLVIPSGDFEKYCNEAYNKNKSKINIPGFRKGKVPKNMIDKYYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ I+ + E + RP I + E I+ D+ + +
Sbjct: 61 GFFYEDAINMGFSKEYSEGVEALSIEPVARPEIDVEE---------IKKGQDIVINVKVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
I P I + ++ L++ +V E EI+ ++ + N + ++ + GD + +D+
Sbjct: 112 IKPDITVENYKGLEIAFPKTDVTESEIEEELESMRNKNARYVTIEDRPVKDGDIIRLDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V + +N I+GS E L+G+ G++K I FP D+ K LAG
Sbjct: 172 GKKDGVPFDGGKAENYSLIIGSKSFIEGFEEQLIGMNLGEEKVINVTFPSDYMEKTLAGA 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + I E+ ++++ F++ ++ + I E + + I
Sbjct: 232 DVTFDVKINEIQEKQLPELDDEFVKDVSEFDTLDELKEDIKKSIHSKKEAKAISEFENDI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHML 353
+D + + D+P ++++E ++ + ++ N ++ ++
Sbjct: 292 IDTVVKNTSMDLPVEMIDSEVEHMMNEFSQGLAYQGMDINMYLGYINKTADDVKNEMRGE 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV +VL I + NI EE+++ L + ++ ++ + + +
Sbjct: 352 AEKRVKGSMVLEKIRDIENISYEEEQLEDELNKMAKQYNMDVNRLKEILPE--EQKQYII 409
Query: 414 APIFEDKVIDHILKSVQ 430
I ID + K +
Sbjct: 410 DSIRTKNTIDFLNKQTK 426
>gi|282900542|ref|ZP_06308486.1| Trigger factor [Cylindrospermopsis raciborskii CS-505]
gi|281194595|gb|EFA69548.1| Trigger factor [Cylindrospermopsis raciborskii CS-505]
Length = 453
Score = 167 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 69/443 (15%), Positives = 181/443 (40%), Gaps = 21/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ ++ E + L++ I + + + I+D+ NI GFR GKV + G
Sbjct: 1 MKITQEKLEKSQIGLEIEITQESTREKYEQVIKDLMRNVNIPGFRKGKVNRQILLQRIGT 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++E+I E + + + + + +A +P + D G + L + D
Sbjct: 61 NRVKASVLEELIPEAIEQAVKQENIKAIGQPKLV---SSFDDLIGKYQPGETLTFSAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI-------GDK 172
+ P++ I + +Q+ + + D ++DR + E + E +
Sbjct: 118 VEPEVNIKQYTGMQIKAEEAKYDSTKVDRAIEEEREKIATLVPVEGRAAQLGDVVLVDFS 177
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
++ T + ++ ++ + +VG+ G+ +EI FP ++
Sbjct: 178 GSLAETPEQEPALIPGAQGEDFSVDLNEDRFIPGFVTGIVGMIPGETREIPAQFPHNYPD 237
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQ 291
++L+ K ++KE+ ++++ A F++ + +R ++ +Q E +
Sbjct: 238 ENLSNKAALFTVTLKEIKEKELPELDDNFAQDVSDFKTLAELRASLEKQFQQKVEEKNTE 297
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE--EDLQY 349
+L + D+PE+++E + + L+K F ++ + + + + + +
Sbjct: 298 NKHEALLQELLQHVEIDLPETMIEQQVDHRLEKTAFNLAQQGLDVKRLFTKETVVQLREN 357
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A + + + I ++ +I V +EE++ + L ++ G + + N
Sbjct: 358 IRPSAIEDLKRDLAIREIAKRESITVDKEEVKKKADEVLQQYSGEDIDVK-------NLK 410
Query: 410 AELRAPIFEDKVIDHILKSVQIV 432
L + +KV++ ++ + +
Sbjct: 411 LVLEIELEREKVLEWLIANSSLE 433
>gi|153822504|ref|ZP_01975171.1| trigger factor [Vibrio cholerae B33]
gi|126519978|gb|EAZ77201.1| trigger factor [Vibrio cholerae B33]
Length = 228
Score = 167 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 54/236 (22%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + ++ + + K ++ + +E G +V++D+ S
Sbjct: 112 YPEVELKGLENIAVEKPAAEVTDADVAEMLETLRKQQATWKEVDEAAENGKRVSIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+D V E +N +G+ + + +VG G + I+ FPED+ +
Sbjct: 172 IDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAEKPE 227
>gi|302391289|ref|YP_003827109.1| trigger factor [Acetohalobium arabaticum DSM 5501]
gi|302203366|gb|ADL12044.1| trigger factor [Acetohalobium arabaticum DSM 5501]
Length = 426
Score = 167 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 96/435 (22%), Positives = 198/435 (45%), Gaps = 17/435 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ E K +LDV + + + E +++ I GFR GKVP +++ YGK
Sbjct: 1 MKVSQEMIEENKVKLDVEVEAEETNKALEEAYKEVVKDVEIDGFRKGKVPRQVLEAKYGK 60
Query: 61 SILS-ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL + +D +I + E + + +P I IE +
Sbjct: 61 EILHKDALDILIPKAYREAVEEAGIEPIDQPEI---------NDFSIEEDKPTTFTAEVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
I P++E+ + DL + Q+ E+ E+++ ++ + + E + GD V +D+
Sbjct: 112 IKPEVELGEYTDLDIEQEAEEITEEDVQEELNNRRERFAELKVTDRDEVQEGDYVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E S + +GS D E LVG K G++ E++ FPE++ DLAG+
Sbjct: 172 GYVDGEPFEGGSAEEYTLEIGSGDFIPGFEEQLVGAKVGEEVEVDVTFPEEYQQDDLAGE 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+KE+ ++++LA + FE+ ++ + K+K+ +E + K ++
Sbjct: 232 GAVFKVDVKEIKEKELPELDDELAQEVGDFETLDELKDDITNKLKEEAERKAKNKFTNEL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
++ IS ++PE++VE+E + ++ ++ + + + + +
Sbjct: 292 VEAISENAEVNIPETMVEDELDLMVDTMKQRLQQQGMDFEQYLEMTGNDEASFREENREE 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV + + L I E+ +I+VTEEE+++ + + + + + + L
Sbjct: 352 ARKRVKSSLALEEIAEEEDIDVTEEEIENKIEEIADQQEQDPEMVKAML-QMQGQYESLI 410
Query: 414 APIFEDKVIDHILKS 428
I +KV+D + ++
Sbjct: 411 ESIQNEKVLDFLTEN 425
>gi|190570981|ref|YP_001975339.1| trigger factor, putative [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019498|ref|ZP_03335304.1| trigger factor, putative [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|238055354|sp|B3CLB0|TIG_WOLPP RecName: Full=Trigger factor; Short=TF
gi|190357253|emb|CAQ54677.1| trigger factor, putative [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212994920|gb|EEB55562.1| trigger factor, putative [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 447
Score = 167 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 85/441 (19%), Positives = 192/441 (43%), Gaps = 25/441 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
E + LK E ++ + S+ + N R+++I A GFR GK+P + + Y L
Sbjct: 22 KELSVDKLKYEYEITVSSDYIEQKINSRLQEIAKNAKFPGFRSGKMPYDLVITNYKNEAL 81
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
I++ I +++ K + ++ + P + I + D +LS++ +P+
Sbjct: 82 EYVINDTIDYCSSDLMKKIEVKSHIHPKVDIMSLP---NLDKKDKKGDFLYKLSFESMPK 138
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---EIGDKVTVDYTVS 180
+ + D + + + ++ E +I + I F + S + DK+ +D+
Sbjct: 139 VPVIDLDKINLKKVKAKIKEGDIKEFIDSIKTKFPNFVSVDDASYQAKNEDKLIIDFEGR 198
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ N + + S KN +GS + + L+G+K G+ K + FPED+ + LAG++
Sbjct: 199 IRNKLFQGGSGKNFTVNLGSGTFINGFEDQLIGMKKGETKSFKLRFPEDYQVISLAGQEA 258
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ + ++ + +N++A R+GFE S++ + I + + +K+++ D
Sbjct: 259 AFSVRVNDIQIAKDLQSDNEIARRIGFEDHSSLIDHVKEVIDNQCKEMEDLLIKKELFDC 318
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+FD+P +V+ E + +++ A+RRV
Sbjct: 319 LDASYSFDLPIEVVKQEQQRVERELNA-------------------KDDSCKEAERRVKL 359
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
++ +++ I +T+ ++ + + Q ++ HF+ +R E K
Sbjct: 360 AMLFMEFSKEHEISLTQSDIMNVIVNQYVSKDVSFDRVFKHFKSDGQFQELVRGQALEYK 419
Query: 421 VIDHILKSVQIVDRKVTFDQL 441
V D++++ ++ V+ +L
Sbjct: 420 VTDYMIEKASKEEQIVSVKEL 440
>gi|268611242|ref|ZP_06144969.1| trigger factor [Ruminococcus flavefaciens FD-1]
Length = 435
Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats.
Identities = 75/436 (17%), Positives = 170/436 (38%), Gaps = 21/436 (4%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSE- 65
+E EL + I + + + + IKGFR GKV + +G+ E
Sbjct: 8 KTEVNTTELVISIDPATFEAAVEKEYQRQKKNIQIKGFRKGKVSRKLAEREFGEGAFYEG 67
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
I+ ++ + +++ RP++ + + ++L+ P+IE
Sbjct: 68 AINSLLGPEIDAAVNETGLILVDRPNVEVTSISKE---------EGVELKAICVTKPEIE 118
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSVDNV 184
I+ + ++ ++ + E+ +++IDRQ+ I K N + +++ D+V +D+ +
Sbjct: 119 IADYKGIKASKAVKEITDEDIDRQIDMIRKKNARIVSVDDRAAQLDDEVIIDFEGFFGDE 178
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
E ++ +GS + +VG GD+ ++ FPED+ + D AGK
Sbjct: 179 AFEGGKGEDHPLRLGSGQFIPGFEDQIVGHNIGDEFDVNVKFPEDYQMTDYAGKDATFKV 238
Query: 245 SIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
+K + +N+DL F++ + K+++ + + +I++ +
Sbjct: 239 KLKAISYEELPEINDDLVKDATEFDTVDEYKADIRTKLEEAAVNQAEASFENEIMNALIA 298
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLAKRRVL 359
K +P + E + +++ ++ S Q + + Y A V
Sbjct: 299 KVDSPIPNCMYEQRIDALMRSFEQQLQSQGMDLNLYFQYTGMDMDSFRETYRERAVNEVK 358
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+ L I E +E TEE++ + L + + + L + I
Sbjct: 359 LRLALEKIAELEGLEATEEDINNGLAELAASNNIDIEMVKRIVP-----LDDYATDIKVQ 413
Query: 420 KVIDHILKSVQIVDRK 435
K +D + ++ + +
Sbjct: 414 KAVDLVKENAVVDETP 429
>gi|325695576|gb|EGD37476.1| trigger factor [Streptococcus sanguinis SK150]
Length = 427
Score = 166 bits (420), Expect = 5e-39, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 176/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G++P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGRLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEAAVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV E E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTEAEVDERIERERNNLAELVLKEGPAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLRLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E + V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYKDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P +V E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMVHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + ++ E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKEEGFEASAEEIEAEVTSLATDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|116491695|ref|YP_811239.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Oenococcus oeni PSU-1]
gi|290891316|ref|ZP_06554377.1| hypothetical protein AWRIB429_1767 [Oenococcus oeni AWRIB429]
gi|122276123|sp|Q04D98|TIG_OENOB RecName: Full=Trigger factor; Short=TF
gi|116092420|gb|ABJ57574.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Oenococcus oeni PSU-1]
gi|290478962|gb|EFD87625.1| hypothetical protein AWRIB429_1767 [Oenococcus oeni AWRIB429]
Length = 439
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 83/446 (18%), Positives = 177/446 (39%), Gaps = 26/446 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
K +G K L IP+ +++ ++ + K NI GFR G V + +G+
Sbjct: 8 NATFKAGKGNKGTLSFEIPAKQISSGIDQAFNKQKDKINIPGFRKGHVSKELFLARFGEE 67
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + ++ I+ +I + +++ D +P I ++ K+ +
Sbjct: 68 ALYEDALNAILPDIYDQAVNEADITVVGQPQI---------IPDDLKHGGPWKIHAEVTL 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
P +E+ + ++V ++ EV +KE++ ++ + K ++ SE GD V +D+
Sbjct: 119 APTVELGDYKGVEVEKESDEVSDKELNAELERLQKGEAELVPAKEDQVSEKGDTVVIDFD 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + +N +GS + LVG K GD +++ FP+++ K+LAGK
Sbjct: 179 GSVDGKQFDGGKAQNFSLSLGSGQFIPGFEDQLVGHKAGDDVDVKVTFPKNYQAKNLAGK 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ +I E+ ++N+ A S ++ +K+ + + +
Sbjct: 239 EAVFAVTIHELKKLETPALDNEFAKDVDDSVSSLEELKAKTKEKLAKDKAEKNKDAFEDA 298
Query: 297 ILDYIS---NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQY 349
+ + +PE ++ ++ + +Q ++ K + E+ Q
Sbjct: 299 AIQKVVDGAKINPEKLPEEMINDDVSRQMQTFFNNLAGQGVKPEMYFQITGTSQEQLKQQ 358
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A RV T +VL I I + EE+ + + E ++
Sbjct: 359 MTEGAPNRVKTNLVLEEIARVEKINPSNEEIDKEIKSLASEYNIKESEVEKSVSA----- 413
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRK 435
L + + ++ I+ S Q V++K
Sbjct: 414 GMLSHDLKVQQAVELIVNSAQAVEKK 439
>gi|253581495|ref|ZP_04858720.1| trigger factor [Fusobacterium varium ATCC 27725]
gi|251836565|gb|EES65100.1| trigger factor [Fusobacterium varium ATCC 27725]
Length = 428
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 93/439 (21%), Positives = 190/439 (43%), Gaps = 20/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K E E+ + + + ++ NE + ++ SKA + GFR GK PL +++ +
Sbjct: 1 MKHEIKKLENSAVEIKISLTTEEVSPIKNEVLAELASKAEVPGFRKGKAPLDKVEAQFKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E ++++ + E++ + I S + T L D+
Sbjct: 61 ALKEEVTEKVLHKYYEEVVKAENITPISY-----------IHSLVTNLTDAFDLTFKVDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE--TESEIGDKVTVDYT 178
P +E+ + L+V ++ E+ E+ +++++ + + E E ++E+GD V + +
Sbjct: 110 YPTVELGEYKGLEVEKETFEMKEELLNKELEIMVNSKSKLEDTEAGHKAEMGDTVDLAFE 169
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E ++ +GS + LVG G + EI FPE + DLAGK
Sbjct: 170 GFVDGVPFEGGKSESHTLKLGSKMFIDNFEDQLVGYTAGQEGEINVTFPEQYHAADLAGK 229
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I + + +N +LA LGFES ++ +++IK E ++ + ++L
Sbjct: 230 PAVFKVKINAIKKLVVPELNEELAKELGFESVEDLKTKKTEEIKAREEARIKNEYIGKLL 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----A 354
D ++ +VP S+V E + ++ ++S+ + D A
Sbjct: 290 DKVAANSKVEVPFSMVATEVKNRISEMENQLSAQGIGMDMYLQMTGMDRAKLENQIAPMA 349
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGH---EKKMLDHFQKYPNALAE 411
+V ++L I + N+EV+EEE+ + + + + ++ L Y N
Sbjct: 350 AGKVKVDLILEAIAKAENLEVSEEEVTAKMTEVARYYGMDLTKLEEELKAHNNYDNFKYT 409
Query: 412 LRAPIFEDKVIDHILKSVQ 430
L+ K ID ++++ +
Sbjct: 410 LKGECMMQKAIDLLVETAK 428
>gi|289432556|ref|YP_003462429.1| trigger factor [Dehalococcoides sp. GT]
gi|288946276|gb|ADC73973.1| trigger factor [Dehalococcoides sp. GT]
Length = 447
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 83/473 (17%), Positives = 184/473 (38%), Gaps = 34/473 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V +K EG + + V + S + + ++ + K I GFR GK P + +
Sbjct: 1 MKVTDKKIEGCQASITVEMDSTEVEEGLSKTYRRLVKKVEIPGFRKGKAPRDVFEKYVSR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E +D+I+ E + + + + P + + T
Sbjct: 61 EKMLDELVDDIVPEACQQAIQDEEIKPFATPKVAMVT------------TDPFVFSARIP 108
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P +E+ + ++ ++ E+ E+ ID + ++ +E E ++GD + +
Sbjct: 109 LPPVVELGDYKTIRAAKETVEIAEENIDTVVDQVLHQRATWETAERPVKMGDMLLMQVES 168
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+++ ++ + + LV + G+ KE FPEDH+ +LAGK
Sbjct: 169 TLNGEPYLNREDMQYSVREEAIYPAPGFGDCLVDMVAGEPKEFSIVFPEDHARAELAGKT 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+++E+ +N+ A F + S +R + ++ + + K + QI
Sbjct: 229 AAFKVTVREIKEEKLPELNDAFAHELNPEFNTLSELRQRIRENMQDRQDDKAQAKFEDQI 288
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV-----DSIDEEDLQYYHM 352
++ + D PE +VE E + I+++ + S + + E+ Q Y
Sbjct: 289 VEALIKMSKIDYPEVMVEAELDQIIEQQLQRLQSNVKSPEEFRAMLSQMTPEDMQQRYRP 348
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
LA++RV + + LG + N+ +EE+ + + + + +++ + + L
Sbjct: 349 LAEQRVASSLALGKLATTENLVPNDEEVDAEIEKLITDAGDKKEEEKALYNQS-ETRDRL 407
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ K + I D++ + + E D+ K E
Sbjct: 408 IQLLTARKTMAFI-------------DEIALQPALEAVEPKADEDEKTEEADK 447
>gi|24378614|ref|NP_720569.1| trigger factor [Streptococcus mutans UA159]
gi|41018216|sp|Q8CWZ6|TIG_STRMU RecName: Full=Trigger factor; Short=TF
gi|24376470|gb|AAN57875.1|AE014861_3 peptidyl-prolyl isomerase RopA (trigger factor) [Streptococcus
mutans UA159]
Length = 427
Score = 166 bits (420), Expect = 6e-39, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 179/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ ++ GFR G +P + +G+
Sbjct: 1 MSTSFENKATNRGVVTFTISQDKIKPALDQAFNKVKKDLTAPGFRKGHMPRTVFNQKFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++ I+ E +++ + +P + + E D ++
Sbjct: 61 EALYEEALNSILPAAYEEAVAELELDVVTQPKVDVKSM---------EKGKDWEITAEVV 111
Query: 120 ILPQIEISSFDDLQVTQDI-CEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L+V+ + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGDYKNLEVSVEESKEVTDAEVDEKIERERNNLAELVLKEDAAVEGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K G+ ++ FPED+ DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGKKAGETVKVNVTFPEDYQSADLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+I EV + ++++LA E+ ++ ++++ E V+
Sbjct: 232 DATFVTTIHEVKAKEVPELDDELAKDIDEEVETLDELKAKYRKELEATKETAYNDAVEAA 291
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+D ++N ++PE ++ +E +Q+ M S+ +E+ + Y
Sbjct: 292 AIDLAVANAEIVELPEEMIHDEVQRAMQEFMGNMQRQGISSEMYFQLTGTTEEDLRKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ + + E T+EE++ + + +++
Sbjct: 352 ADADKRVKTNLVIEAVAKAEGFEATDEEIEKEISDLATEYKMEAEQVRSLLSPD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I S ++
Sbjct: 407 LKHDIAMKKAVNVITDSAKVK 427
>gi|81301333|ref|YP_401541.1| trigger factor [Synechococcus elongatus PCC 7942]
gi|34222757|sp|Q935Z3|TIG_SYNE7 RecName: Full=Trigger factor; Short=TF
gi|15620531|gb|AAL03915.1|U30252_3 unknown [Synechococcus elongatus PCC 7942]
gi|81170214|gb|ABB58554.1| trigger factor [Synechococcus elongatus PCC 7942]
Length = 474
Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats.
Identities = 60/408 (14%), Positives = 163/408 (39%), Gaps = 10/408 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V ++ + L + + + + + + + GFRPGKVP + G+
Sbjct: 4 KVTQEKLPASRVGLQIEVSGEQSRQVYERTLTRLSREVRFPGFRPGKVPRPVLIQRLGET 63
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + I++++++ + +++ A ++ + + + S D+
Sbjct: 64 ALKANAIEDLVQQSLESAIAQESIPAIGNYQLSSD---FETLVAAFQPGESFSFEASVDV 120
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDY 177
P ++ + L V D +D +AE K E + +
Sbjct: 121 QPTATLAQYTGLTVEVAEVPFDANRVDNVLAEQQKQMATLVPVEGRNAAIGDVAVIDFQG 180
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ + S + Q V +VG+ + + ++ FPE ++ +++AG
Sbjct: 181 ILVESGEEIPGGSGTDFQIEVEEDRFIPGFISGIVGMAIEETRTVDATFPETYAQEEVAG 240
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K + ++KE+ + +++ A +E+ ++ +++ + E V+ +
Sbjct: 241 KAAQFTITLKELKTRDLPELDDAFAQEASQYETIEELKTALTERFQAEHESEVKASKRDA 300
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
IL ++++ ++PESL++ E + ++ + +S + + + + E + A
Sbjct: 301 ILTALADQLDVEIPESLLQREISAMINETASRLSGQGMDVRKLFTEEVLERLRENSKDEA 360
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF 402
++R+ I LG + + +V +E +++ + L +P ++ D
Sbjct: 361 EQRLRRTIALGELAKVTETQVDDEAVKARAAELLSNYPRPQEIDRDRL 408
>gi|332687237|ref|YP_004457011.1| cell division trigger factor [Melissococcus plutonius ATCC 35311]
gi|332371246|dbj|BAK22202.1| cell division trigger factor [Melissococcus plutonius ATCC 35311]
Length = 427
Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats.
Identities = 77/438 (17%), Positives = 175/438 (39%), Gaps = 23/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + L I + + + ++ N+ GFR GKV +YG+
Sbjct: 1 MSVKWEKKGTNDGVLTFSIERSEIEKGLTQAFNKVKKNLNVPGFRKGKVSRQVFNRMYGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ EI + + +P I + + D D + +
Sbjct: 61 EVLYEDALNAVLPEIYENAVKEAKIEPVSQPKIDVESMKKD---------EDWVITATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++++ + L++ + E+ +++I+ ++ +N ++ +E G+ V +D+
Sbjct: 112 VKPEVKLGDYKGLKIAKQDREITDQDIEDRLKREQENQAELVIKEDEPAESGNTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E +N +GS + L+G GD ++ FPED+ KDLAGK
Sbjct: 172 GFLDGKEFEGGKGENYSLELGSNSFIPGFEDQLIGKSAGDHVDVNVTFPEDYQAKDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + EV ++++ A ++ + ++ +++K+ E + +
Sbjct: 232 EANFKVVVHEVKVKEVPELDDEFAKDIDDSVDNLAELKEKYRKELKEAKETSADEAKNEE 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++PE +V E N + + M + +E+ + +
Sbjct: 292 AIHKAVENAEIVELPEVMVHEEINRSMDEFLNNMKRQGIEPDTYYKLTNTTEEDLRKQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ RV T +V+ I + IE+ +EE+ + ++ E+++ +
Sbjct: 352 EDAETRVKTNLVIEAIAAQEKIEIPQEEIDGEIKDLSEQYNMPEEQVRSILTED-----M 406
Query: 412 LRAPIFEDKVIDHILKSV 429
L+ I K +D I ++
Sbjct: 407 LKHDIRMKKAVDAITETA 424
>gi|304385127|ref|ZP_07367473.1| trigger factor [Pediococcus acidilactici DSM 20284]
gi|304329321|gb|EFL96541.1| trigger factor [Pediococcus acidilactici DSM 20284]
Length = 438
Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 72/438 (16%), Positives = 174/438 (39%), Gaps = 23/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + +L + ++ + + ++ + + N+ GFR G VP LYG+
Sbjct: 1 MTAKWEKTGTNEGKLTFEVGTDMIKEGVDKAFQRTKKSLNVPGFRKGHVPRQIFNKLYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + + +P + + + +E L
Sbjct: 61 EALYQDALNIVLPDAYSAAIKEAGIEPVDQPQVDVEK---------LEKGEPWVLSAIVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + ++V + V KE+D ++ + + +KE + D VT+D+
Sbjct: 112 VKPEVKLGEYKGVKVIKQSTRVTSKEVDEEIEKKREQQAELVLKEGKPAEKGDTVTIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + N +GS + L+G T D +++ FPED+ ++L GK
Sbjct: 172 GSIDGVPFDGGKATNYDLELGSNSFIPGFEDQLIGHNTDDDVDVKVTFPEDYQAEELQGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ I E+ + ++++ A +S ++ +IK+ + + +
Sbjct: 232 EALFKVKIHEIKTKELPELDDEFAKDVDEDVDSLEELKAKTKDQIKERKIQAADEAKESE 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+ + ++PE+++ + + + + M Q S +++ Q
Sbjct: 292 AIQEAVDNAEIKEIPEAMLREDVDRQVNQYLANMQQQGISPDMYFQLTGSSEDQLRQQLS 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ RV T +VL I E I+ ++EE+ + ++ EK +
Sbjct: 352 EGAENRVKTTLVLEAIVEAEKIDPSDEELDAEYKSLAEQYNMEEKAVRSALTAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSV 429
++ + + +D I S
Sbjct: 407 VKHDVAIKQAVDLIKDSA 424
>gi|283769490|ref|ZP_06342386.1| trigger factor [Bulleidia extructa W1219]
gi|283103758|gb|EFC05144.1| trigger factor [Bulleidia extructa W1219]
Length = 445
Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 78/433 (18%), Positives = 162/433 (37%), Gaps = 23/433 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
E +L V+I + + + S + GFR G+ P + ++ ++
Sbjct: 3 NWTLKEKSTGDLSVVIEGETWKKAVKKAFNKLVSNITLPGFRKGQAPKAMLEKRISENER 62
Query: 64 S-ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
E + + + E L + +P + I E+D + ++ + P
Sbjct: 63 YLEAVQDNANTWLREALEETQLTPISQPKLDIKTIEADKAEVV----------YTFAVQP 112
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVD 182
+ + + L+ + V EKEI ++ + + E+K+ ++ G+ V +DY D
Sbjct: 113 EANVKEYKGLEYPLEEVSVSEKEIKSELDRMREQYAEMEIKKGKAVKGNTVNIDYEGFKD 172
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ E ++GS E L+G K G++KEIE FP+D+ DLAG V
Sbjct: 173 GIPFEGGKADGYDLVLGSGSFIPGFEEQLIGTKAGEEKEIELSFPKDYHAVDLAGAPVTF 232
Query: 243 NFSIKEVFSPLPVVVNNDLAV---RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ EV VN+D A G E+ + + ++ + + + ++D
Sbjct: 233 KVKVNEVKVKKLPEVNDDFAQDINAPGVENVEQLNKMIEDRLLNSKKKTANETAESALMD 292
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLAK 355
+ +P+ +VE E + ++ ++ + + E + YH A
Sbjct: 293 ALVANTEVQLPDVMVEEEVQNQVNQLAQQIQQYGMSLDAYLKMIGQTQETLKKGYHDNAV 352
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ V + L + + N+ EEE++ ++ ++ K L
Sbjct: 353 KTVTLRLALEAVAKAENLTANEEEIEKEYSDIASQYNMEIDRVKSMISKN-----MLSKD 407
Query: 416 IFEDKVIDHILKS 428
+ K D + +
Sbjct: 408 VVNKKAYDFVKDN 420
>gi|304440715|ref|ZP_07400599.1| trigger factor [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304370902|gb|EFM24524.1| trigger factor [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 475
Score = 166 bits (419), Expect = 8e-39, Method: Composition-based stats.
Identities = 83/435 (19%), Positives = 178/435 (40%), Gaps = 17/435 (3%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-LSE 65
E K D+ +P + + ++ I GFR G P I+++YGK I L +
Sbjct: 6 KRENNKVYFDITLPKEEVKKAEVVAYNKLKKTVQIPGFRKGHAPKMIIENVYGKGIFLED 65
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
++E++ + E + + +P + +E I D+ S + P+IE
Sbjct: 66 AVNELLPKYYEEAIKELKLEVVDQPDVDFDE--------NISSDEDVVCHFSVFVKPEIE 117
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSVDNV 184
I + L+V EV ++ +D + K N + + DKV +D+ +D
Sbjct: 118 IEKYKGLEVEDAKHEVTDEMLDEDLKRQQKMNARSVNIDDRAAAEHDKVNIDFEGFIDGK 177
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
+N +GS E ++G GD+ ++ FPED+ ++ GK+
Sbjct: 178 AFPGGKGENQDLELGSGTFIPGFEEQIIGKNIGDEFDVVTKFPEDYHAEEFRGKEATFKT 237
Query: 245 SIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
+ + ++++ F++ + +K+++ +E + + +L I+
Sbjct: 238 KLNSITVEELPEIDDEFIKDISEFDTVDEYKADLRKKLEEEAEKRTKLDREGNVLKKIAE 297
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKRRVL 359
K D+PE +VE+E + +Q M + + + AK ++
Sbjct: 298 KVEVDLPERMVEDEVDRTIQSYNQSMQGQGITLEQYLQMLGTDINTFREGQKEQAKASII 357
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY--PNALAELRAPIF 417
+ +++ I E NIEVT+EE+++ + + LG + + + + +K A + +
Sbjct: 358 SRLIVEKIVELENIEVTDEEVEAEIDKVLGEYFKDDAEKREDMKKMMLETNKAAVEDDLK 417
Query: 418 EDKVIDHILKSVQIV 432
+ +D ++ + V
Sbjct: 418 ARRALDILVNENKFV 432
>gi|310657899|ref|YP_003935620.1| trigger factor (tf) [Clostridium sticklandii DSM 519]
gi|308824677|emb|CBH20715.1| Trigger factor (TF) [Clostridium sticklandii]
Length = 428
Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats.
Identities = 82/438 (18%), Positives = 193/438 (44%), Gaps = 18/438 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M E L + I + + + ++K N++GFR GK P+S ++ YG+
Sbjct: 1 MSSEILKKENSVVTLKLTIDAQSFDKACKDAYNKNKTKFNVQGFRKGKAPMSIVEKFYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ + + + + D RP I + E I +L +
Sbjct: 61 GVFFEDAVNTLFPDAFEVAVKEHDLDTVARPEIDVEE---------IGKGKNLVIIADVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P+I + + +L V + EV ++E+++++ + + N F ++ E + D + +D+
Sbjct: 112 VKPEISLGEYKNLTVEKPDSEVSDEEVEKEIEAMREQNARFVTVEDREVKEKDMLLIDFN 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E +N IVGS E L+G+K ++K++ FPE++ ++LAGK
Sbjct: 172 GKVDGVEFEGGQAENYSIIVGSDTFIPGFEEQLIGMKLNEEKDLSVKFPEEYHAENLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ E+ ++++ A F++ ++ K+++ + ++++ ++
Sbjct: 232 DAIFTVKVNEIKEKELPELDDEFAKDVSEFDTLEDLKADAKAKLQKTKDEYADREIENKL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+ + T ++PE++++++ ++ +++ +N E +
Sbjct: 292 VKMAAENATVEIPEAMIDSQVENMVYDFEYQLKYQGLDLENYLKFTNMSIEGLKEQMRPD 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
AK RVL +V+ I + NIE TEE+++ L + + K+ + P+ + ++
Sbjct: 352 AKSRVLNSLVIEAISKSENIESTEEDLEQELAKMAESYKMEVDKLKSTLR--PSDMDYIK 409
Query: 414 APIFEDKVIDHILKSVQI 431
+ K ++ I + +
Sbjct: 410 DTVVARKTVEFIKGNANL 427
>gi|156741460|ref|YP_001431589.1| trigger factor [Roseiflexus castenholzii DSM 13941]
gi|156232788|gb|ABU57571.1| trigger factor [Roseiflexus castenholzii DSM 13941]
Length = 506
Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats.
Identities = 72/475 (15%), Positives = 165/475 (34%), Gaps = 25/475 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+V + EL V + ++ + + + K NI GFR GK P +++ +G+
Sbjct: 5 KVTTEKKPRSVLELTVELDKEQIEKALDRAARRMSQKYNIPGFRKGKAPRFIVENYFGRE 64
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E D++I++ E L + + +T + +
Sbjct: 65 ALLEEASDDLIQKAFQEALKQEGIEPYAQAHLTAVNL----------DNPPFNFTVEVPV 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD------KVT 174
P +E+ + ++V + V ++ ++ M + +V E ++
Sbjct: 115 APTVELPDYRAIRVPFEQDAVTDEMVNHAMEHLRDRHVVLRSLEEPRPAQHGDQLTVQIE 174
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+ E + ++ + E L+G+ ++ +DH +
Sbjct: 175 TYVDGKLLESRGEGEEIPQSTLVLDPERIVPGLYEALLGVSPNTMVDVTVRMADDHENEQ 234
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
+ GK VR ++ E+ L + A+ + +R Q++ + +V
Sbjct: 235 VRGKDVRFVVNVLEIQERLLPEWDELPALENFEGTLDELREKTRQELIAAARKSAEDRVF 294
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYY 350
+ + + TFD+PE+L+E E + IL++ E + + V E ++
Sbjct: 295 LEYVRQVVAATTFDLPEALIEREADSILREREGEYERYGVRPEQVYEAQGTTREALIERL 354
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A+ R G+VL I + E E+ + + ++ +
Sbjct: 355 KPAAEERAKRGLVLREIARAEGLAPDETEITQEIEDIVASMEEEQRDSARIILGS-ELRS 413
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ A I + K+ +L +F+Q + + + E ++
Sbjct: 414 FVAAGIVDRKLRRRLLAIAT---GDPSFEQQTTPAVADETHEAAGATPAAEIAET 465
>gi|296394284|ref|YP_003659168.1| trigger factor [Segniliparus rotundus DSM 44985]
gi|296181431|gb|ADG98337.1| trigger factor [Segniliparus rotundus DSM 44985]
Length = 455
Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats.
Identities = 79/473 (16%), Positives = 187/473 (39%), Gaps = 28/473 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + LDV +P L ++ + + I GFRPGK P I++ G+
Sbjct: 1 MRSTVERLSPTRVRLDVEVPFEELKPELDQAVRVLAHHVRIPGFRPGKAPAQLIRARVGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
ILS+ I+E + E +++ + +P + + + D
Sbjct: 61 EAILSQLIEEAVPARYNEAVAEAKLQPLGQPKFDLGK-------DKPVFGEPINFSAEVD 113
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P ++I FD ++ T D V ++++ ++ + + +++ GD VTVD
Sbjct: 114 VRPDLDIPDFDAIEATVDPLTVTDEDVAERIELLRQRFRELSPVTRKAKEGDVVTVDVVE 173
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +E+ + + +G + E ++GLK G + +E + G K
Sbjct: 174 LVDGEPVEETKETDQPIDLGGENTPKNLKEAVIGLKEGQKGNVEF-------ATSVEGAK 226
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
L ++ V ++ + ++ + ++ ++I++ +++ +++
Sbjct: 227 RSLEITVTAVKEVKLPELDEEFVQTASSHDTVAQLQDATRKEIEEERRRGRLNQIRERVV 286
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEM----SSANQKSQNVDSIDEEDLQYYHMLA 354
D + K +PE++++ G + ++ Q Q + + + A
Sbjct: 287 DSLLAKVEPPIPEAVLQARVRGQIGQLAQRTGLSPEQFEQFLQIQGKTVSDLEEQFAEAA 346
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELR 413
KR + ++L I +K + E E AL ++ +F + ++Y L E+R
Sbjct: 347 KRELGLQLILDAIADKEGLATAELEQVDALRARVSQFSGKKASEQRQQIEQYARMLEEVR 406
Query: 414 APIFEDKVIDHILKSVQIVDR---KVTFDQLFDNSSESSPEKLLDKSSKVETF 463
++ + ++ + +I + V +LF+ +++ + E +
Sbjct: 407 ----RNQALRQVIDAAKITETGGAVVDVAELFEQTAQQAQESEDHAEQDPQDA 455
>gi|251781748|ref|YP_002996050.1| trigger factor [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242390377|dbj|BAH80836.1| trigger factor, PPIase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 456
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 85/441 (19%), Positives = 177/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 30 MSTSFENKATNRGVITFTIGQDKIKPALDQAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 89
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 90 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGQEWTLTAEVV 140
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V + EV ++E+D ++ N VKE + +GD V +D+
Sbjct: 141 TKPEVKLGDYKNLAVEVEASKEVTDEEVDAKVERERANLAELVVKEDAAALGDTVVIDFV 200
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K GD+ E+ FPE + +DLAGK
Sbjct: 201 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPEAYQAEDLAGK 260
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++LA E+ + ++ ++++ E V+
Sbjct: 261 DAKFVTTVHEVKTKEVPELDDELAKDIDEEVETLADLKAKYRKELEAAKEIAYDDAVEGA 320
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
++ ++N ++PE +V +E + + + M + E+ Y
Sbjct: 321 AIELAVANAEIVELPEEMVHDEVHRSMNEFMGNMQRQGISPEMYFQLTGTSQEDLHNQYQ 380
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E TEEE++ + + +++
Sbjct: 381 ADADKRVKTNLVIEAIAKAEGFEATEEEIEQEINDLATEYNMPVEQVRSLLSAD-----M 435
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I S +
Sbjct: 436 LKHDITMKKAVEAITSSAIVK 456
>gi|270291414|ref|ZP_06197636.1| trigger factor tig [Pediococcus acidilactici 7_4]
gi|270280260|gb|EFA26096.1| trigger factor tig [Pediococcus acidilactici 7_4]
Length = 438
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 72/438 (16%), Positives = 174/438 (39%), Gaps = 23/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + +L + ++ + + ++ + + N+ GFR G VP LYG+
Sbjct: 1 MIAKWEKTGTNEGKLTFEVGTDMIKEGVDKAFQRTKKSLNVPGFRKGHVPRQIFNKLYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ + + + +P + + + +E L
Sbjct: 61 EALYQDALNIVLPDAYSAAIKEAGIEPVDQPQVDVEK---------LEKGEPWVLSAIVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + ++V + V KE+D ++ + + +KE + D VT+D+
Sbjct: 112 VKPEVKLGEYKGVKVIKQSTRVTSKEVDEEIEKKREQQAELVLKEGKPAEKGDTVTIDFD 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S+D V + N +GS + L+G T D +++ FPED+ ++L GK
Sbjct: 172 GSIDGVPFDGGKATNYDLELGSNSFIPGFEDQLIGHNTDDDVDVKVTFPEDYQAEELQGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ I E+ + ++++ A +S ++ +IK+ + + +
Sbjct: 232 EALFKVKIHEIKTKELPELDDEFAKDVDEDVDSLEELKAKTKDQIKERKIQAADEAKESE 291
Query: 297 ILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+ + ++PE+++ + + + + M Q S +++ Q
Sbjct: 292 AIQAAVDNAEIKEIPEAMLREDVDRQVNQYLANMQQQGISPDMYFQLTGSSEDQLRQQLS 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ RV T +VL I E I+ ++EE+ + ++ EK +
Sbjct: 352 EGAENRVKTTLVLEAIVEAEKIDPSDEELDAEYKSLAEQYNMEEKAVRSALTAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSV 429
++ + + +D I S
Sbjct: 407 VKHDVAIKQAVDLIKDSA 424
>gi|324989940|gb|EGC21882.1| trigger factor [Streptococcus sanguinis SK353]
Length = 427
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 79/441 (17%), Positives = 174/441 (39%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E + L I ++ + + ++ + GFR G +P + +G+
Sbjct: 1 MSVSFENKETNRGLLTFSISQEKIKPALDRVFNSVKKDIAVPGFRKGHLPRAIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P + E D ++
Sbjct: 61 EALYQDALNALLPEAYEASVKEAGIEVVAQPQFDVESM---------EKGQDWVIKAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ ++ DL+VT + EV + E+D ++ N +KE + GD V +D+
Sbjct: 112 TKPEVKLGAYKDLEVTVEATKEVTDAEVDERIERERNNLAELVLKEGTAADGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS E LVG G+ ++ FPED+ +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEEQLVGHSAGETVDVVVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ + +I EV ++++LA E+ ++ +++ + E + V+
Sbjct: 232 EAKFVTTIHEVKEKEVPALDDELAKDIDEEVETLDELKEKYRKELSEAKETAYKDAVEAA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+D D+P ++ E + + + M Q + E+ + Y
Sbjct: 292 AIDQAVANAEIVDLPAEMIHEEVHRAVNEFLGNMQRQGISPDMYFQITGTTQEDLHKQYE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R T +V+ + + E + EE+++ + + +++ +
Sbjct: 352 ADAESRTKTNLVVEAVAKAEGFEASAEEIEAEVTSLATDYNMEVERVRQLLSED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I + ++
Sbjct: 407 LKHDIAIKKAVEVITSTAKVK 427
>gi|326803639|ref|YP_004321457.1| trigger factor [Aerococcus urinae ACS-120-V-Col10a]
gi|326650110|gb|AEA00293.1| trigger factor [Aerococcus urinae ACS-120-V-Col10a]
Length = 426
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 84/438 (19%), Positives = 179/438 (40%), Gaps = 22/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L + + + ++ K NI GFR GKV + G+
Sbjct: 1 MSVKFEETATNEGVLHFTVSKEDAQKALKQAYNRVKGKVNIPGFRKGKVSYPVFVKMIGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ + + + + D +P + + +L+
Sbjct: 61 EALYEDALNYALPQAYANAVKEADLDVVGQPKFDVEKMH---------KGGSWELKAEVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P + + + DL V + EV +++++ ++ + +N +KE E++ GD V +DY
Sbjct: 112 TKPSVSLGDYKDLTVDKQDREVTDEDVENRLKQAQENLAELSIKEGEAQEGDTVVIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
SVD S +N +GS + LVG K+GD+ E++ FPE++ +DLAG+
Sbjct: 172 SVDGETFAGGSAENHSLELGSNSFIPGFEDQLVGSKSGDEVEVKVTFPEEYHAEDLAGQD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV ++++ A ES ++ ++++ + ++V+ Q
Sbjct: 232 AIFKVKVHEVKEKSVPELDDEFAKDVDDEVESLDELKAKYRDQLQEAKDQQADEQVEDQA 291
Query: 298 LDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ + F VP+++++ E N L EM + +E+ Q +
Sbjct: 292 IRQAVDNAEFSSVPQAMIDEEVNRQLDHYLNEMQRQGISPEMFYQLTGTSEEDLRQQFAE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T ++L I + NIEV+EE++ + + + + + + L
Sbjct: 352 DADTRVKTNLLLEQIIAEENIEVSEEDIAKEIENLAETYNMEVEAVKNVVTED-----ML 406
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ I + ++ I + +
Sbjct: 407 KHDIELKQAMNLITSTAK 424
>gi|325570034|ref|ZP_08145959.1| trigger factor [Enterococcus casseliflavus ATCC 12755]
gi|325156862|gb|EGC69033.1| trigger factor [Enterococcus casseliflavus ATCC 12755]
Length = 427
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 75/439 (17%), Positives = 168/439 (38%), Gaps = 23/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L I + ++ N+ GFR GKV +YG+
Sbjct: 1 MTAKWEKTGTNDGVLTFTIAQAEIQKGLTTAFNKVKGNLNVPGFRKGKVSRQVFNRMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P I ++ E D ++
Sbjct: 61 EALYEDALNAVLPEAYEAAVKEAGIDPVSQPKIDVDSM---------EKGQDWVIKAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++++ + DL V + EV E+++D ++ + ++ +E GD V +D+
Sbjct: 112 VKPEVKLGDYKDLTVEKQDREVTEEDVDARIKREQEAQAELVIKEDEAAENGDTVVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ E +N +GS E LVG K GD K++ FPED+ +DLAGK
Sbjct: 172 GFLGEETFEGGKGENYSLELGSNSFIPGFEEQLVGTKAGDSKDVTVTFPEDYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++ A ES + ++ ++ + E
Sbjct: 232 EAVFKVTVHEVKAKELPELDDEFAKDVDDSVESLAELKEKYRAELTETKEKAAEDAKDEA 291
Query: 297 ILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ ++P S+V +E + + + M + + + +
Sbjct: 292 AIRQAVENAEIVELPHSMVHDEVHRSMDEFLNNMQRQGISPEMYYQLTGSTEADLHTQFE 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ RV T +V+ I ++ +E TEE+++ + + + ++ +
Sbjct: 352 GEAETRVKTNLVIEAIAKEEGLEATEEDIEKEIKELSEAYNMPVDQIKRVLTED-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQ 430
L+ I K ++ + + +
Sbjct: 407 LKHDITMKKAVELVTGTAK 425
>gi|322411085|gb|EFY01993.1| trigger factor [Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 427
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 86/441 (19%), Positives = 178/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTIGQDKIKPALDQAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 61 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGQEWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V + EV ++E+D ++ N VKE + +GD V +D+
Sbjct: 112 TKPEVKLGDYKNLAVEVEASKEVTDEEVDAKVERERANLAELVVKEDAAVLGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K GD+ E+ FPE + +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPEAYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++LA E+ + ++ ++++ E V+
Sbjct: 232 DAKFVTTVHEVKTKEVPELDDELAKDIDEEVETLADLKAKYRKELEAAKEIAYDDAVEGA 291
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
++ ++N ++PE +V +E + + + M S+ E+ Y
Sbjct: 292 AIELAVANAEIVELPEEMVHDEVHRSMNEFMGNMQRQGISSEMYFQLTGTSQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E TEEE++ + + +++
Sbjct: 352 ADADKRVKTNLVIEAIAKAEGFEATEEEIEQEINDLATEYNMPVEQVRSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I S +
Sbjct: 407 LKHDITMKKAVEAITSSATVK 427
>gi|329769173|ref|ZP_08260593.1| trigger factor tig [Gemella sanguinis M325]
gi|328839392|gb|EGF88970.1| trigger factor tig [Gemella sanguinis M325]
Length = 422
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 73/430 (16%), Positives = 165/430 (38%), Gaps = 22/430 (5%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSE 65
E K + + + + N GFR GK+P + +YG+ + E
Sbjct: 6 NKEDGKVVISFSASKEEFAKGLDRAFKSAVKRVNAPGFRKGKLPRAVFNKMYGEEALYQE 65
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
ID ++ + + + + P I + E + + + P +E
Sbjct: 66 AIDFVLPAAYTKAIDELELSPLAMPDIDVKEISKE---------NGVTFEAVVTVKPDVE 116
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ + +L + ++ EV + +++ ++ + ++VKETE++ GD V +D+ + +
Sbjct: 117 LGEYKNLGIEKEAVEVTDADVEERLESVLSREAEWQVKETEAKKGDIVVIDFKGFIGDEA 176
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
E K + +GS E L G E+ FPE++ + DLAGK R +
Sbjct: 177 FEGGEAKGYELELGSGAFIPGFEEQLEGKVAPVDTEVNVTFPENYQVADLAGKDARFEVT 236
Query: 246 IKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
+ +V + + ++ E + + + Q++ L ++ +++ +
Sbjct: 237 VHDVKEKVLPELTDEFIKEFSKESASTVAEYKEKLKQELTLERTELAEKEYSDKVISTVV 296
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLAKRRV 358
VPE LV+ E + ++ +S Q +E A+ ++
Sbjct: 297 ENAKVSVPEKLVDQEVESMFEQFAGNLSRQGLSFDLYEQFTGKTADELKSEMRSDAENKI 356
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T VL I IEVT+ ++ + + + + ++ + + +LR +
Sbjct: 357 KTSFVLADIATAEKIEVTDADIDAEVKKLAEMYSMTDEGVRSRIS-----VEDLRGELSI 411
Query: 419 DKVIDHILKS 428
K ++ + ++
Sbjct: 412 QKTVEFLKEN 421
>gi|300813659|ref|ZP_07093981.1| trigger factor [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512201|gb|EFK39379.1| trigger factor [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 460
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 82/449 (18%), Positives = 196/449 (43%), Gaps = 18/449 (4%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-L 63
K E D+++ + D+ E + + + GFR G VP I+++YGK + L
Sbjct: 3 IKSKEKNTVSFDLVLKDKDIKDAETEVYKKNKKSLQVPGFRKGHVPRKLIENMYGKDVFL 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+ I+EI+ E+ + + + +P+I I E D DL + + D+ P+
Sbjct: 63 EDAINEILPEVYAKAVKELKLDVIDQPNIDIPEERKD--------GEDLIVNVKVDVKPE 114
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSVD 182
++ + L++ EV ++ + +++ + N + ++ GD V +DY S D
Sbjct: 115 AKLGEYKGLEIEDPTMEVTDEVVMQEVENEREKNARIINVDDRAAQKGDSVNIDYKGSCD 174
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ K +GS + ++G K G++ +I FPED+ ++L GK+ +
Sbjct: 175 GEYFKGGEDKGHNLELGSGAFIEGFEDQIIGHKVGEEFDINVKFPEDYRDENLKGKEAKF 234
Query: 243 NFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
+ + ++++ F++ + + ++ + + + +R+I++ +
Sbjct: 235 EIKLNGISYKELPKLDDEFVKDISEFDTLEEYKEDIRKNKQEEYDVNAKMEKQRRIVEKL 294
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKRR 357
+VPE +V + + ILQ + + + E + AK
Sbjct: 295 GEIAEVEVPEVMVNRQIDEILQNYERSLMGQGISLNDYIKMTGSSIEAMRESLKEGAKNT 354
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY--PNALAELRAP 415
V + L + + NI +++E+++ + + + + +K+ ++ + Y ++R
Sbjct: 355 VKNDLALDALVKAENIRISDEDVEKEVNEVVEDYFKDDKEHMEKMRSYMLNENKEQIRDD 414
Query: 416 IFEDKVIDHILKSVQIVD-RKVTFDQLFD 443
+ + K +D IL+S ++V+ +K++ ++
Sbjct: 415 LAKRKAVDIILESAKLVEPKKLSEEEAQK 443
>gi|171742686|ref|ZP_02918493.1| hypothetical protein BIFDEN_01800 [Bifidobacterium dentium ATCC
27678]
gi|283456243|ref|YP_003360807.1| tig Trigger factor, PPIase [Bifidobacterium dentium Bd1]
gi|306822550|ref|ZP_07455928.1| trigger factor [Bifidobacterium dentium ATCC 27679]
gi|309801475|ref|ZP_07695602.1| trigger factor [Bifidobacterium dentium JCVIHMP022]
gi|171278300|gb|EDT45961.1| hypothetical protein BIFDEN_01800 [Bifidobacterium dentium ATCC
27678]
gi|283102877|gb|ADB09983.1| tig Trigger factor, PPIase [Bifidobacterium dentium Bd1]
gi|304554095|gb|EFM42004.1| trigger factor [Bifidobacterium dentium ATCC 27679]
gi|308221990|gb|EFO78275.1| trigger factor [Bifidobacterium dentium JCVIHMP022]
Length = 456
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 64/416 (15%), Positives = 158/416 (37%), Gaps = 23/416 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L V + +E ++I + N+ GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTVTVDPEEFNPYLDEARKEIAKQVNVPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + E+ + L + +P I + E + LK + +
Sbjct: 61 GAVAGEAVNNGVPELYSKALETKKIHPMAQPEIDVQE-----VPESAKDETKLKFVATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ D +++ + E+ +++I+ ++ + + + + GD +D
Sbjct: 116 RRPDIELPEVDGMEIEVEKAEITDEDINNRLEALRQRFGTLVGVDRPAAKGDYANIDLNA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S++ V + +GS + E L GL G++ E + G+K
Sbjct: 176 EIDGESVD--SQEGVSYELGSGTMLDGLDEALEGLSAGEETTFEGTLEAG----EHEGEK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + V + +++D A F++ ++ + Q +E + +
Sbjct: 230 AQIKVKVNSVKTEELPELDDDFASEASEFDTLDELKEDLKKAASQDAEGRQATAARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ VP+ + L+ V + + D +E ++ +
Sbjct: 290 AKLEEGLEIPVPKGVKAEMVEQQLKNV----------TADPDKATKEQKAEAEETVEKEL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+VL + EK +++V++ ++ + L ++ + + + ++
Sbjct: 340 RDQMVLDVLAEKMDVKVSQADVFNFLASIAQQYGMDPNAFIQAIMRNGQLGSAVQE 395
>gi|282883092|ref|ZP_06291692.1| trigger factor [Peptoniphilus lacrimalis 315-B]
gi|281297069|gb|EFA89565.1| trigger factor [Peptoniphilus lacrimalis 315-B]
Length = 460
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 82/449 (18%), Positives = 197/449 (43%), Gaps = 18/449 (4%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-L 63
K E D+++ + D+ E + + + GFR G VP I+++YGK + L
Sbjct: 3 IKSKEKNTVSFDLVLKDKDIKDAETEVYKKNKKSLQVPGFRKGHVPRKLIENMYGKDVFL 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+ I+EI+ E+ + + + +P+I I E D DL + + D+ P+
Sbjct: 63 EDAINEILPEVYAKAVKELKLDVIDQPNIDIPEERKD--------GEDLIVNVKVDVKPE 114
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSVD 182
++ + L++ EV ++ + +++ + N + ++ GD V +DY S D
Sbjct: 115 AKLGEYKGLEIEDPTMEVTDEVVMQEVENEREKNARIINVDDRAAQKGDSVNIDYKGSCD 174
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ K +GS + ++G K G++ +I FPED+ ++L GK+ +
Sbjct: 175 GEYFKGGEDKGHDLELGSGAFIEGFEDQIIGHKVGEEFDINVKFPEDYRDENLKGKEAKF 234
Query: 243 NFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
+ + ++++ F++ + + ++ + + + +R+I++ +
Sbjct: 235 EIKLNGISYKELPKLDDEFVKDISEFDTLEEYKEDIRKNKQEEYDVNAKMEKQRRIVEKL 294
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKRR 357
+VPE +V + + ILQ + + + E + AK
Sbjct: 295 GEIAEVEVPEVMVNRQIDEILQNYERSLMGQGISLNDYIKMTGSSIEAMRESLKEGAKNT 354
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY--PNALAELRAP 415
V + L + + NI++++E+++ + + + + +K+ ++ + Y ++R
Sbjct: 355 VKNDLALDALVKAENIKISDEDVEKEVNEVVEDYFKDDKEHMEKMRSYMLNENKEQIRDD 414
Query: 416 IFEDKVIDHILKSVQIVD-RKVTFDQLFD 443
+ + K +D IL+S ++V+ +K++ ++
Sbjct: 415 LAKRKAVDIILESAKLVEPKKLSEEEAQK 443
>gi|256827325|ref|YP_003151284.1| trigger factor [Cryptobacterium curtum DSM 15641]
gi|256583468|gb|ACU94602.1| trigger factor [Cryptobacterium curtum DSM 15641]
Length = 547
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 75/445 (16%), Positives = 169/445 (37%), Gaps = 23/445 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + +++L V + + + + + D K N GFR GK P I S+ G
Sbjct: 1 METKVEALKDNRKKLTVSVDATEVDNRIKKTYRDFAGKYNFPGFRKGKAPRPVIDSMLGP 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + ++II + P + + D A +PS S L+E + +
Sbjct: 61 NAVTATVTEDIINSLYPRAMDEADLIAIGQPSFE-------QESDLVEAGKSFSFSATVE 113
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT- 178
+ P+ +SS+D +++ E E+EID Q+ E+ FE ++ + +
Sbjct: 114 VRPEFSLSSYDAIEIKLPSVEATEEEIDSQVDELRNYYYTFEDAPASKKLAAGDFAEISL 173
Query: 179 --VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
V + +E ++ + + S E L+GL G + +E E +
Sbjct: 174 EAVDANGNHVESLETESRLYELSSGLFPPAFDEALIGLSKGKKATVEVDMSEPSLMGQGM 233
Query: 237 GKKVRL--NFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEFLVRQK 292
++ +K+V + ++++ A + +R + IKQ E ++ +
Sbjct: 234 DNPGKVTLTVEVKQVKKKVLPALDDEWAKETAGFEGGVAELRERVADSIKQQKEQMMPRL 293
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQ 348
+ + L + + + P+++ + E +LQ ++ + E+
Sbjct: 294 RENEALYALQERLEGEAPKAMCDVEEQSLLQNFFMQIQQQGVTFDAYLAQMGLTAEQFRD 353
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
A+ + L I+VT+EE+ + + +K
Sbjct: 354 DLKKQARDVTEQDLALDAWARHAKIDVTDEEISAEFAKADAAHAASLEKEWR----DAGR 409
Query: 409 LAELRAPIFEDKVIDHILKSVQIVD 433
+A LRA + + I+ ++++ +
Sbjct: 410 IATLRAGMRRTAALSAIMDNMKVSE 434
>gi|329767994|ref|ZP_08259505.1| trigger factor tig [Gemella haemolysans M341]
gi|328838479|gb|EGF88087.1| trigger factor tig [Gemella haemolysans M341]
Length = 422
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 77/430 (17%), Positives = 168/430 (39%), Gaps = 22/430 (5%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSE 65
E K + ++ + + N GFR GK+P + +YG+ + +
Sbjct: 6 NKEDGKVVIAFSATKEEFAKGLDQAFKRAVKRVNAPGFRKGKLPRAVFNKMYGEEALYQD 65
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
+D ++ + + + + P I + E + +K + P +E
Sbjct: 66 AVDYVLPRAYTKAIDELEVSPLAMPDIDVKEISKE---------EGVKFEAVVTVKPNVE 116
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ + +L + +D EV + +++ ++ + +++KE ES+ GD V +D+ + +
Sbjct: 117 LGEYKNLGLEKDSVEVTDADVEERLDSLLSRQAEWQIKEGESKKGDIVVIDFKGFIGDEA 176
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
E K + +GS E L G + FPE++ + DLAGK+ + +
Sbjct: 177 FEGGEAKGYELELGSGSFIPGFEEQLEGKVAPVDTVVNVTFPENYQVADLAGKEAKFEVT 236
Query: 246 IKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
+ +V + + ++ E + + + ++IK E L + +++
Sbjct: 237 VHDVKEKVLPELTDEFVKEFSKEAASTVAEYKEKLKEEIKLEKENLAEKSYSDKVISTAV 296
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLAKRRV 358
VPE LVE E N + ++ +S Q + E A+ ++
Sbjct: 297 ENAKLSVPEKLVEQEVNSMFEQFTGNLSRQGLSFDLYQQFTGKGEAELKAEMKSDAENKI 356
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T VLG I E +EVT+ ++ + + + + E+ + + +LR +
Sbjct: 357 KTSFVLGEIAEVEKVEVTDADIDAEVKELATMYNMTEEGIKQRIS-----VEDLRGELVI 411
Query: 419 DKVIDHILKS 428
K +D + +
Sbjct: 412 QKTVDFLKAN 421
>gi|15895899|ref|NP_349248.1| trigger factor [Clostridium acetobutylicum ATCC 824]
gi|21264077|sp|Q97FT6|TIG_CLOAB RecName: Full=Trigger factor; Short=TF
gi|15025668|gb|AAK80588.1|AE007761_7 FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor)
[Clostridium acetobutylicum ATCC 824]
gi|325510051|gb|ADZ21687.1| trigger factor [Clostridium acetobutylicum EA 2018]
Length = 431
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 91/441 (20%), Positives = 199/441 (45%), Gaps = 18/441 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E + ++ + ++ ++ + R + N+ GFR GK PL+ IK+ YG
Sbjct: 1 MNSKMEKLEKNVIKFEITVDESKFNEAVIKSYNKNRRRFNVPGFRKGKAPLNIIKNYYGV 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E I+ I + PE++ + D P I I +E D
Sbjct: 61 GVLYEDAINFCIDDTYPEVIKENDIHPVAYPEIDIVT---------LEEGKDFVYTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
+ P++E+ + ++VT+ V +++++ ++ + + N E E GD +D+
Sbjct: 112 VKPEVELGEYKGVEVTKVEYPVTDEDVENELKGMQEKNARIELKEDGEAVEKGDIAVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD+V E K+ +GS + LVGLK + K++ FPE++ ++L G
Sbjct: 172 KGYVDDVAFEGGEGKDYSLEIGSGTFIDNFEDQLVGLKKDESKDVNVKFPEEYGKEELNG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K + +IKE+ ++++ A F++ ++ K+++ +E + + + +
Sbjct: 232 KPAKFEVTIKEIKRKELPALDDEFAKEVSEFDTLDEVKADIRSKMEKANEEKAKIEFEDK 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++D ++PE +V+NE + +L+++ + + +S +E+ Y
Sbjct: 292 VVDAAVENAKIEIPEVMVKNETDQMLKELESRLRYQGLDLKSYYEYTNSSEEKVRDYMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A +RV T +V+ I E +E TEEE++ + ++ + + + + +
Sbjct: 352 TADKRVRTKLVMEKISEVEKVEATEEELKEKAKEMAQQYTNKDLDKMAELVLN-SQRSMI 410
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
+ KVID ++++ ++V+
Sbjct: 411 EQDVINGKVIDLLVENAKVVE 431
>gi|257456331|ref|ZP_05621528.1| trigger factor [Treponema vincentii ATCC 35580]
gi|257446417|gb|EEV21463.1| trigger factor [Treponema vincentii ATCC 35580]
Length = 435
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 79/439 (17%), Positives = 185/439 (42%), Gaps = 25/439 (5%)
Query: 1 MQVIEK--FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLY 58
M ++ E + +L + + + + + + + + I GFR GKVP+ ++ +
Sbjct: 1 MNFTKEFTPIEKSRMKLSITVKQDEVQNRYALLTKKYAKQLQIPGFRKGKVPVKILEQKF 60
Query: 59 GKSILSETIDEIIKEIVPEILSKRDER----AAMRPSITINEGESDITSGLIEGTVDLKL 114
G ++ +ET DE+I+ ++ E+ D+ +P + + D+
Sbjct: 61 GDTLRAETYDEVIQNVLEEVFESADKYSRPLPYSQPELDGT--------PDFKLDADMAF 112
Query: 115 RLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE---VKETESEIGD 171
+ YD+LP++E+S + V+ V + +I++++A I + N +T
Sbjct: 113 AVMYDVLPKVELSKVEGFTVSVPEVSVTDGDIEKELALIQERNALVIDCADTDTVQNDNI 172
Query: 172 KVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
+ + +E + + F VG + L+G+K G++K I + +P +H
Sbjct: 173 VTINYVQLDDSDAEIETSKRNDFVFTVGKGQFHYGVDDELIGMKKGEEKVIVKTYPAEHI 232
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLV 289
K LAGK ++L ++ + +++DLA +++ + ++ S+ + + ++
Sbjct: 233 DKQLAGKTIKLKVTVTALKRKELPAIDDDLAQDVSEKYKTLADLKADISKNLTRQVADVL 292
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ------NVDSID 343
+K ++L ++ ++PES+V+ E G + + + + + N
Sbjct: 293 ERKKTDELLKQMAEANPIELPESMVKAELEGRWAMLAQRLGMSPESLEKLTIDINGKLSK 352
Query: 344 EEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ 403
+ + A+ R+ T I++ + E I + E++++ R + + H+
Sbjct: 353 ASAMTEWRTEAELRLKTRIIVEKLLEDRGITASPEDVEAEYASIAERTGASAEDVKKHYD 412
Query: 404 KYPNALAELRAPIFEDKVI 422
P L I E K +
Sbjct: 413 GNPRDKEYLIDDIKEKKTL 431
>gi|88657614|ref|YP_507696.1| trigger factor [Ehrlichia chaffeensis str. Arkansas]
gi|119370898|sp|Q2GFT7|TIG_EHRCR RecName: Full=Trigger factor; Short=TF
gi|88599071|gb|ABD44540.1| trigger factor [Ehrlichia chaffeensis str. Arkansas]
Length = 439
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 95/442 (21%), Positives = 186/442 (42%), Gaps = 19/442 (4%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
V E ++ LK E + + D + ++ +I + GFR GK + ++ Y
Sbjct: 7 VREVSNDKLKWEYEFAVDKKYFLDQLDSKLSEIAMNVKVPGFRVGKASIDLVRKEYLNEA 66
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
++ + + I+ + + + +I I S + E DL +LS++++P
Sbjct: 67 MTSVVKKTIESTSSDFVKNSKFGEIISSNIDIVSYPSYYSDNDKE--EDLVYKLSFEVMP 124
Query: 123 QIEISSFDDL---QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ + D++ + DI E D E + + + V + E + DK+ +DY
Sbjct: 125 EAPLMDIDNIVLSDIEVDIQECDVNEFIENLKKQRPDFVIVDDPEYVIQGSDKLVIDYQN 184
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ IL S K+ ++G E + L+G+K G+ K FP D+ + LAGK
Sbjct: 185 KIKGKILRGGSAKDFVLVLGKGVALREFEDQLIGMKVGESKTFPLTFPNDYGMVHLAGKT 244
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ ++K V+ + + +A GF+ M ++IKQ + +V VK+++ D
Sbjct: 245 TDMSVTVKSVYVMKGMRDSEAIAKDYGFKDVGHMEDFARKRIKQQFDQMVFTIVKKELFD 304
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
Y+ Y DVPE +V E I ++ + E+ A +RV
Sbjct: 305 YMDANYVIDVPECVVTQEIAKI--------------NKEIRDSGEDIQIDVEKEAIKRVK 350
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G++L + NNI + E++ S + + +L Q N + + E+
Sbjct: 351 LGMLLIKMSRHNNITIKNEDVFSFIQSNYADYGVDIGNVLKMLQSNKNFANYISGKVLEE 410
Query: 420 KVIDHILKSVQIVDRKVTFDQL 441
KVI++I+ + + +T +
Sbjct: 411 KVINYIIGLAKKDKKVMTAKDI 432
>gi|260892391|ref|YP_003238488.1| trigger factor [Ammonifex degensii KC4]
gi|260864532|gb|ACX51638.1| trigger factor [Ammonifex degensii KC4]
Length = 433
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 86/441 (19%), Positives = 190/441 (43%), Gaps = 17/441 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K L+V + + R + + + I GFR G+ P ++ GK
Sbjct: 1 MRASAKHLGNSTVLLEVEVEAERFDRALERAYRKLVKELEIPGFRKGRAPRPLVERYLGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
E +++E+ PE + RP I + + +E L + +
Sbjct: 61 ERFRQEAAWLLLEEVYPEAVENAGIEPVSRPEIELVQ---------VEEGKPLVFKAKVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++ + + ++VT+ + EV E+E++ ++ ++ K E E E+ D+ V
Sbjct: 112 VKPEVTLGEYKGIRVTRRVKEVTEEEVEAEIEKLRKRYARLVTVE-EGEVQDEDIVTLDY 170
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ +K + +G L E L G + G+++E++ FP +H LAGK+
Sbjct: 171 KLTVGEEVLAEEKEREIEIGLGYLGPEVDAALKGARPGEEREVKINFPPEHPEPKLAGKE 230
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
L ++ + + ++++LA F++ +R QK+ + +E ++V+R+++
Sbjct: 231 ALLKVKVRSIHRRELLPLDDELAKEVSEFDTLEELRADIRQKLTKAAEEEADRQVRREVV 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHMLA 354
+ + ++P SLVE + +L+ V N+ + + EE + A
Sbjct: 291 EKVVANAQLELPPSLVEARTDELLEDVVAAAEGRGVPANRFFELAKTTPEEMRERLRPEA 350
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ + +VL + E N++V EEE+++ + + + +++ ++ L +R
Sbjct: 351 EQSLKVRLVLDAVAEAENLQVEEEEVKAEVEKIASLYRQDPERLYRSLEE-EGRLELVRG 409
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
+ DK ID ++ I +
Sbjct: 410 KLRRDKAIDFLVSQAVIEEEA 430
>gi|167750810|ref|ZP_02422937.1| hypothetical protein EUBSIR_01792 [Eubacterium siraeum DSM 15702]
gi|167656245|gb|EDS00375.1| hypothetical protein EUBSIR_01792 [Eubacterium siraeum DSM 15702]
Length = 438
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 65/440 (14%), Positives = 173/440 (39%), Gaps = 21/440 (4%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
+ + E++ + + + N+ GFR GK P I++ YG+ +
Sbjct: 12 ISNNKTATNTVEVEFKASAEEFEQAVQAAYLKKKKNINVPGFRKGKAPRKIIEAEYGEGV 71
Query: 63 -LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ ++ + ++ V E++ + P+I + E + + + ++
Sbjct: 72 FYEDAVNGMYQKSVAEVIDELKLEVVDMPNIEVTEVSKE---------NGVSFKATFTTK 122
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVS 180
P++EI + ++V + + V ++++ ++ + + + + GD D+
Sbjct: 123 PEVEIKDYKGIKVNKTVKNVTDEDVANELKRYQEKDARIIDVTDRPLQKGDTAVFDFEGF 182
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E ++ +GS + +VG ++ EI FPE+++ ++L GK
Sbjct: 183 VDGEAFEGGKAEHFSLEIGSGQFIPGFEDGMVGHSIDEEFEINVTFPENYNAENLKGKPA 242
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
I E+ + ++++ A F++ + K+++ ++ K+ I D
Sbjct: 243 VFKCKIHEIKAKEYAELDDEFAKDVSDFDTLDEFKADIRAKLEESAKNAADAKLDADITD 302
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAK 355
+ K ++P++++ N + +++ + + E+ + + A
Sbjct: 303 AVIEKLEGEIPDAMINNRVDDLVRDWEYRNRYQGITVADYLKFTNTTIEQFKENFKEPAA 362
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
++V + L I + N+ VT+E+++ + + K+ + LR
Sbjct: 363 KQVKLRLALEKIAQIENVAVTDEDVEKEYAEMAENYKMELDKVKALVAE-----QALRKD 417
Query: 416 IFEDKVIDHILKSVQIVDRK 435
+ +K D + +S + +
Sbjct: 418 LEVEKAFDIVRESADVTEVT 437
>gi|154488711|ref|ZP_02029560.1| hypothetical protein BIFADO_02018 [Bifidobacterium adolescentis
L2-32]
gi|154082848|gb|EDN81893.1| hypothetical protein BIFADO_02018 [Bifidobacterium adolescentis
L2-32]
Length = 454
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/475 (14%), Positives = 174/475 (36%), Gaps = 26/475 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L V + +E ++I + N+ GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTVTVDPEEFNPYLDEARKEIAKQVNVPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + E+ + L + +P I + + + LK + +
Sbjct: 61 GAVAGEAVNNGVPELYSKALETKKIHPMAQPEIDVQD-----VPESAKDETKLKFVATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ + D +++ EV +++I+ ++ + + + + GD +D
Sbjct: 116 RRPDIELPALDGMEIEVAKAEVTDEDINNRLEALRQRFGTLVSVDRPAAKGDYANIDLNA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D ++ S++ V + +GSA + E L GL G++ E G+K
Sbjct: 176 EIDGETVD--SQEGVSYELGSATMLDGLDEALEGLSAGEETSFEGTLEAG----KHEGEK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +++D A F++ ++ + Q +E + +
Sbjct: 230 ALIKVKVNSVKAEELPELDDDFASEASEFDTLDELKEDLKKVAAQDAEGRQATAARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP+ + L+ V + + +E ++ +
Sbjct: 290 AKLEDGLEIPVPKGVKAEMVEQQLKNV----------TADPSKATKEQKAEAEETVEKEL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + E +++V++ E+ + L ++ + + + +
Sbjct: 340 RDQMVLDVLAETMDVKVSQGEVFNFLASIAQQYGMDPNAFIQAIIRN-GQIGSAVQEVGR 398
Query: 419 DKVIDHILKSVQIVD--RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K + +++V + +++E + ++ +S E A E
Sbjct: 399 SKGLLSGMRAVTFKSEGETLDLSAFLGSAAEDEESESVEAASAAAAVADELASDE 453
>gi|291530695|emb|CBK96280.1| trigger factor [Eubacterium siraeum 70/3]
gi|291557796|emb|CBL34913.1| trigger factor [Eubacterium siraeum V10Sc8a]
Length = 430
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 65/440 (14%), Positives = 173/440 (39%), Gaps = 21/440 (4%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
+ + E++ + + + N+ GFR GK P I++ YG+ +
Sbjct: 4 ISNNKTATNTVEVEFKASAEEFEQAVQAAYLKKKKNINVPGFRKGKAPRKIIEAEYGEGV 63
Query: 63 -LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ ++ + ++ V E++ + P+I + E + + + ++
Sbjct: 64 FYEDAVNGMYQKSVAEVIDELKLEVVDMPNIEVTEVSKE---------NGVSFKATFTTK 114
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVS 180
P++EI + ++V + + V ++++ ++ + + + + GD D+
Sbjct: 115 PEVEIKDYKGIKVNKTVKNVTDEDVANELKRYQEKDARIIDVTDRPLQKGDTAVFDFEGF 174
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E ++ +GS + +VG ++ EI FPE+++ ++L GK
Sbjct: 175 VDGEAFEGGKAEHFSLEIGSGQFIPGFEDGMVGHSIDEEFEINVTFPENYNAENLKGKPA 234
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
I E+ + ++++ A F++ + K+++ ++ K+ I D
Sbjct: 235 VFKCKIHEIKAKEYAELDDEFAKDVSDFDTLDEFKADIRAKLEESAKNAADAKLDADITD 294
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAK 355
+ K ++P++++ N + +++ + + E+ + + A
Sbjct: 295 AVIEKLEGEIPDAMINNRVDDLVRDWEYRNRYQGITVADYLKFTNTTIEQFKENFKEPAA 354
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
++V + L I + N+ VT+E+++ + + K+ + LR
Sbjct: 355 KQVKLRLALEKIAQIENVAVTDEDVEKEYAEMAENYKMELDKVKALVAE-----EALRKD 409
Query: 416 IFEDKVIDHILKSVQIVDRK 435
+ +K D + +S + +
Sbjct: 410 LEVEKAFDIVRESADVTEVT 429
>gi|163791243|ref|ZP_02185659.1| trigger factor [Carnobacterium sp. AT7]
gi|159873513|gb|EDP67601.1| trigger factor [Carnobacterium sp. AT7]
Length = 426
Score = 165 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 79/438 (18%), Positives = 168/438 (38%), Gaps = 22/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L I ++ + + ++S ++ GFR GKVP + YG+
Sbjct: 1 MTAKWEKKGTNDGVLTFEISEEKIKEGLDTAFNKVKSTLSVPGFRKGKVPRTIFNKQYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E + + +P I + E +
Sbjct: 61 EALYEDALNAVLPEAYDAAVLEAGLDPVAQPKIDVKSM---------EKGEAWVIEAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + L V + EV +K+++ + + +KE + GD V +DY
Sbjct: 112 VKPEVELGEYKGLTVEKQDREVTDKDVEENIEQKRAAQAELVLKEDAAVDGDTVVIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D V E +N +GS E LVG+K D+ +++ FPED+ +DL G
Sbjct: 172 FKDGVAFEGGKGENHSLELGSNSFIPGFEEKLVGVKAEDELDVDLTFPEDYHAEDLKGAA 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + EV + ++++ A E+ +A++ ++ + + ++
Sbjct: 232 VTFKVKVHEVKAKELPELDDEFAKDVDEEVETLAALKEKIKTQLTEAKNAAADEAIEEAA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ + D+P ++V +E + + +M + +++ +
Sbjct: 292 IRQAVDNAKIEDLPWAMVHDEVHRQMDVFLNDMQRQGVSPEMYYQITGTTEQDLHKQMEA 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A R T +VL I + + E +EEE+ + ++ EK + L
Sbjct: 352 DADLRTRTNLVLEAIVDAESFETSEEEVNEEIKNLGEQYGMDEKAVRAALTP-----EML 406
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ I K ID I ++ +
Sbjct: 407 KHDISMKKAIDLITETAK 424
>gi|295103744|emb|CBL01288.1| trigger factor [Faecalibacterium prausnitzii SL3/3]
Length = 434
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 83/448 (18%), Positives = 174/448 (38%), Gaps = 24/448 (5%)
Query: 1 MQ-VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M+ V + E ++ + L + N E R+ IKGF+ G+ + I++ G
Sbjct: 1 MKLVSVETPEKSVCKMTFSATAEELEAASNAVYERTRATYTIKGFQKGEADRAQIEADRG 60
Query: 60 KS-ILSETIDEIIKE----IVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKL 114
+ + I++++ + + L + PS + + D
Sbjct: 61 EHTFWYDAINDLMDQDVPALYEAALKEHGFAPVDDPSYDLVSVKKD---------EGFVA 111
Query: 115 RLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVT 174
+ + P+++++ EV +KEID + + + G+ V
Sbjct: 112 TATVALQPELKLTKTTGFTSQCVTPEVTDKEIDTVLERRRNYAAELVPHKGPAVKGNVVH 171
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+D+ +D V + + K+ +GS + + ++G K GD+ EI FP+++ K+
Sbjct: 172 MDFEGLLDGVAFKGGTAKDQSVQLGSGRMIPGFEDGILGHKAGDEFEINVTFPKNYPNKE 231
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
LAGK V + +V +N+D A ++G E+ R Q++ K
Sbjct: 232 LAGKPVVFKIKLHDVCVRQLPALNSDFAKKMGKETMEEYRAFVKQQLFDGRHGGALNHAK 291
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEM----SSANQKSQNVDSIDEEDLQYY 350
IL +++ ++P LVEN Y +Q ++ ++ S N + E
Sbjct: 292 DMILGQLADAAEGEIPSILVENAYQQQMQVIQQQLQMQRMSLNTYLSQIHETRESFTAKV 351
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A++ + L I ++ N+ T+EE+ L ++ + +++ +A
Sbjct: 352 RAAAEKNTRARMALLQIAQQENLLPTDEEIDKQLAERAEKTKKTVEEIKAS-----TDVA 406
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTF 438
LR K D ++ I ++ +
Sbjct: 407 ALRRNEGIRKAADWVIDHSTIEEKVESK 434
>gi|160943480|ref|ZP_02090713.1| hypothetical protein FAEPRAM212_00970 [Faecalibacterium prausnitzii
M21/2]
gi|158445159|gb|EDP22162.1| hypothetical protein FAEPRAM212_00970 [Faecalibacterium prausnitzii
M21/2]
Length = 434
Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats.
Identities = 81/448 (18%), Positives = 172/448 (38%), Gaps = 24/448 (5%)
Query: 1 MQ-VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M+ V + E ++ + L + N E R+ IKGF+ G+ + I++ G
Sbjct: 1 MKLVSVETPEKSVCKMTFSATAEELEAASNAVYERTRATYTIKGFQKGEADRAQIEADRG 60
Query: 60 KS-ILSETIDEIIKE----IVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKL 114
+ + I++++ + + L + PS + + D
Sbjct: 61 EHTFWYDAINDLMDQDVPALYEAALKEHGFAPVDDPSYDLVSVKKD---------EGFVA 111
Query: 115 RLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVT 174
+ + P+++++ EV +KEID + + + G+ V
Sbjct: 112 TATVALQPELKLTKTTGFTSQCVTPEVTDKEIDTVLERRRNYAAELVPHKGPAVKGNVVH 171
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+D+ +D V + + K+ +GS + + ++G K GD+ EI FP+++ K+
Sbjct: 172 MDFEGLLDGVAFKGGTAKDQSVQLGSGRMIPGFEDGILGHKAGDEFEINVTFPKNYPNKE 231
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
LAGK + +V +N+D A ++G E+ R Q++ K
Sbjct: 232 LAGKPAVFKIKLHDVCVRQLPALNSDFAKKMGKETMEEYRAFVKQQLFDGRHGGALNHAK 291
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYY 350
IL +++ ++P LVEN Y +Q ++ ++ + E
Sbjct: 292 DMILGQLADAAEGEIPSILVENAYQQQMQVIQQQLQMQRMSLTTYLSQIHETRESFTAKV 351
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A++ + L I ++ N+ T+EE+ L ++ + +++ K +A
Sbjct: 352 RAAAEKNTRARMALLQIAQQENLLPTDEEIDKQLAERAEKTKKTVEEI-----KAGTDVA 406
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTF 438
LR K D ++ I ++ +
Sbjct: 407 ALRRNEGIRKAADWVIDHSTIEEKVESK 434
>gi|196230685|ref|ZP_03129546.1| trigger factor [Chthoniobacter flavus Ellin428]
gi|196225026|gb|EDY19535.1| trigger factor [Chthoniobacter flavus Ellin428]
Length = 446
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 76/443 (17%), Positives = 175/443 (39%), Gaps = 22/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + L V + ++ ++E A I G+R GK P + I+ + K
Sbjct: 1 MNVAVETLPNCITTLKVEVEPAKVAKVWDEVAGSYTKFARIPGYRAGKAPKAIIEKKFQK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +++ E E + ++ + + E D +K +
Sbjct: 61 EIREELEKKLLSEACKEAIQEKGIKVLSLTQVDDIEIGED---------KTMKFTATLIT 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
P ++ + + V +V ++E++ + E+ + F + ++ D V +DYT
Sbjct: 112 RPDFQLPVYKGIIVPLKSTDVTDEEVENSLNELREQAADFVDVTEDRGAQMEDFVVIDYT 171
Query: 179 VSVDNVILEDQSKK---------NVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
++D + D+ K + + F +E LVG K G+ ++ + P +
Sbjct: 172 GTIDGAPVSDKFPKAGQPLSGNSDFWIHMVHEAFFPGFSEALVGAKVGETRKFDIEVPAE 231
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFL 288
++ L G+K++ +IK + +++ A + ++ ++ + ++I +
Sbjct: 232 FPVEGLPGQKIQYEVTIKGIKQKTLPALDDAFADTIVKGKTLDELKKVAKEEIGRQKGAE 291
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
+ +I+ ++ + ++P +V E IL + E + + ++E L
Sbjct: 292 AEATKRNEIMRHLLAQVECELPVDMVRTETRRILADIVRENQARGVTEDVLKQNEQEILG 351
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
A+ R+ VL I E NI+ T++E + R+ K++ + NA
Sbjct: 352 SAAQNARDRLKGTFVLLKIAEAENIKPTQQEFDQRIAYLAARYDMKPDKLIKKLDE-RNA 410
Query: 409 LAELRAPIFEDKVIDHILKSVQI 431
+ ++ + KV+D + + +
Sbjct: 411 IDQILEEVLTSKVLDFLAANASV 433
>gi|262037361|ref|ZP_06010826.1| trigger factor [Leptotrichia goodfellowii F0264]
gi|261748618|gb|EEY35992.1| trigger factor [Leptotrichia goodfellowii F0264]
Length = 427
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 77/436 (17%), Positives = 182/436 (41%), Gaps = 20/436 (4%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
K E+ V + L + A + GFRPG VP ++ + K I
Sbjct: 3 TVKKLNETTYEVSVSRTGDELKHMKEHVLTHF-KDAKVAGFRPGHVPKDVLERTFKKEIE 61
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E ++ II E + +S+ D + + E ++D + + +LP+
Sbjct: 62 DEILNHIISEEYSKAVSENDLKPIDNIKLEKYENDNDKVELVF----------TIPVLPE 111
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDYTVSV 181
I++ + ++V ++ +V +++++ ++ + + +E+ D +D+ +
Sbjct: 112 IKLGEYKGVKVEKEELKVTDEKVNEEIERLRVGAAKLREVEEGAAAELNDVTNIDFEGFI 171
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V + + +GS + + +VG K GD+ ++ FPE++ ++LAGK
Sbjct: 172 DGVAFDGGKAEGFDLTLGSKNFIDTFEDQIVGHKKGDEFDVNVTFPENYGAENLAGKPAV 231
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
+ + +N+DLA LGF+S ++ + I + E + + ++++ +
Sbjct: 232 FKVKVNSIKRREETELNDDLAKELGFDSMEDLKNKTKENITKREESRIENDFRNKVVEKV 291
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKRR 357
+ +VPE L++ E + + ++ + E+ + AK+
Sbjct: 292 AEGTEVEVPEGLIQKEIQYKVNEFAQQLQMQGMSLNQYFEMTGQDLEKMRETLREPAKKS 351
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LAELRA 414
+ T ++L I + NI ++E++ + + + + + +L+ +K N + +
Sbjct: 352 LKTQLILDEIAKAENIAASDEDVNAEVEKMAEMYGVDKDVILEDVKKSGNYARFVENTKY 411
Query: 415 PIFEDKVIDHILKSVQ 430
I K +D ++K +
Sbjct: 412 QIVNRKTVDFLVKEAK 427
>gi|300856724|ref|YP_003781708.1| trigger factor [Clostridium ljungdahlii DSM 13528]
gi|300436839|gb|ADK16606.1| trigger factor [Clostridium ljungdahlii DSM 13528]
Length = 430
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 90/439 (20%), Positives = 202/439 (46%), Gaps = 17/439 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V ++ E +L++ + + + +S + K NI GFR GK P++ IK YG+
Sbjct: 1 MNVKKEKIEENVVKLEITVEAEKFNESMKKAFAKNAKKFNIPGFRKGKAPMNIIKKYYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + I+ + P+ + + D + P I I + I +
Sbjct: 61 GVFYEDAINFCCDDTYPQAIKENDIKPVDYPEIDIVQ---------IGEGKEFIYTAKVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+LP++++ + L+V ++ EV ++E++ ++ + + N E KE+ E G+ +D+
Sbjct: 112 VLPEVKLGEYKGLEVKKNTYEVKDEEVEAELKTMQQKNARIETKESGSIEKGNIAVIDFN 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD+ E + K+ Q +GS + L+GL GD K++ FP+++ ++L GK
Sbjct: 172 GFVDDKEFEGGAGKDYQLEIGSGTFIDNFEDQLIGLNAGDSKDVHVTFPKEYGREELNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++KE+ ++++ A F++ ++ K K+ +E +++ + +
Sbjct: 232 EAVFKVTVKEIKIKELPELDDEFAKDISEFDTLDKVKEDIKNKKKEANELRTKREFEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHML 353
LD + + ++PE +++ E + +L+ + + Q ++ +E+ +Y
Sbjct: 292 LDKVCSNAEINIPEVMIKKEIDTMLKDLELRLKYQGLDLKTYYQYTNNTEEKVREYMKES 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++RV T +V+G I + IE T++E+ + ++ E + N + L
Sbjct: 352 AEKRVRTDLVIGEIAKVEKIEATDDELMERAKEMAAQYGNKEAEKTAKIIFN-NQKSYLE 410
Query: 414 APIFEDKVIDHILKSVQIV 432
+ +KV+ ++ S +
Sbjct: 411 TDVVNEKVVKMLVDSSKAT 429
>gi|119485221|ref|ZP_01619606.1| trigger factor [Lyngbya sp. PCC 8106]
gi|119457449|gb|EAW38574.1| trigger factor [Lyngbya sp. PCC 8106]
Length = 478
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 71/446 (15%), Positives = 185/446 (41%), Gaps = 25/446 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+V ++ + LD+ I +++ + I NI GFR GKVP + G
Sbjct: 1 MKVTQEKLPASQIGLDIEISPEMSKNAYEQVIRQYARSVNIPGFRKGKVPRHILVQRLGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + +D+++++ +P+ + + + A + G+ + E L ++ + D
Sbjct: 61 GRIKAAALDDLMQQCLPKAVEQENIPAIGSFEL---RGDVEELVAQYEPGQLLTIKAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---------EIG 170
I P++++ + L V + + D +D + + E +
Sbjct: 118 IAPEVQLGEYKGLNVQAEEVKFDPARVDEVLEQEQTKLATLVPVENRPAQTGDVAFVDFK 177
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
+ + + S +N Q + TE ++G+ G+ KE++ FP+D+
Sbjct: 178 GVFATEKNEEGEPQEIPGGSAENFQVELIEGQFIPGFTEGMIGMNPGETKELQVTFPDDY 237
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLV 289
++LAG+ ++ E+ +++D A FE+ + +R ++ ++ ++
Sbjct: 238 GNEELAGQAAVFTITLNELKVKELPELDDDFAEEVSEFETLAELRESLEKRFQEEADEQT 297
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE--EDL 347
+ +++ I ++PE+++ E + +L + ++S + + + + +
Sbjct: 298 TANKNKALIEAIVANLQVELPETMIREEVDQVLTQQAMQLSQMGVDIKRLFTQEMIPQMR 357
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A ++ + L I ++ +I ++EE++Q+ + + + G E P+
Sbjct: 358 ERSRPQAIEQLKQSLALKEIAQQESITISEEDIQAEEAKTMTQLQGQEV--------DPD 409
Query: 408 ALAELRAP-IFEDKVIDHILKSVQIV 432
L E+ + + + K ++++ +
Sbjct: 410 RLREVVSENLLKKKTYSWLVENSTVE 435
>gi|257468341|ref|ZP_05632435.1| trigger factor, PPIase [Fusobacterium ulcerans ATCC 49185]
gi|317062615|ref|ZP_07927100.1| trigger factor [Fusobacterium ulcerans ATCC 49185]
gi|313688291|gb|EFS25126.1| trigger factor [Fusobacterium ulcerans ATCC 49185]
Length = 428
Score = 164 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 89/439 (20%), Positives = 188/439 (42%), Gaps = 20/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K E E+ + + + ++ NE + ++ KA + GFR GK PL +++ +
Sbjct: 1 MKHEIKKLENSAVEIKISLTTEEVSPIKNEVLAELAGKAEVPGFRKGKAPLDKVEAQFKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E ++++ + E++ + I S + L D+
Sbjct: 61 ALKEEVTEKVLHKYYEEVVKAENIMPISY-----------IHSVVTNLNDAFDLTFKVDV 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE--TESEIGDKVTVDYT 178
P +E+ + L+ ++ E+ E+ +++++ + + E E ++E+GD V + +
Sbjct: 110 YPTVELGEYKGLEAEKETFEMTEEVLNKELEIMVNSKSKLEDTEAGHKAEMGDTVDLAFE 169
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD V E ++ +GS + LVG G + EI FPE + DLAGK
Sbjct: 170 GFVDGVPFEGGKSESHTLKLGSKMFIDNFEDQLVGYTAGQEGEINVTFPEQYHAADLAGK 229
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I + + +N +LA LGFES ++ +++IK E ++ + ++L
Sbjct: 230 PAVFKVKINAIKKLVVPELNEELAKELGFESIEDLKAKKTEEIKAREEARIKNEYIGKLL 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----A 354
D ++ +VP S+V E + ++ ++S+ + D A
Sbjct: 290 DKVAASSKVEVPFSMVATEVKNRISEMENQLSAQGIGMDMYLQMTGMDRAKLENQIAPMA 349
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ---KYPNALAE 411
+V ++L I + N+EV+EEE+ + + + + K+ + + Y N
Sbjct: 350 AGKVKVDLILEAIAKAENLEVSEEEVTAKMTEVAKYYGMDLAKLEEELKTHNNYDNFKYT 409
Query: 412 LRAPIFEDKVIDHILKSVQ 430
L+ K I+ ++++ +
Sbjct: 410 LKGECMMQKAINLLVETAK 428
>gi|169350158|ref|ZP_02867096.1| hypothetical protein CLOSPI_00900 [Clostridium spiroforme DSM 1552]
gi|169292941|gb|EDS75074.1| hypothetical protein CLOSPI_00900 [Clostridium spiroforme DSM 1552]
Length = 435
Score = 164 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 85/439 (19%), Positives = 183/439 (41%), Gaps = 22/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ K E E+ V +S + + + K I GFR GK P++ +K+ GK
Sbjct: 9 MKINNKKLENAIVEVTVAFDKEEWKESQKKALNKLSRKVKIDGFRQGKAPIAVVKARIGK 68
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E D I++ + L + +P++++++ +L++++
Sbjct: 69 GKILEEATDMILQANFAKALEEAKVEPIAQPALSVDKI----------DEEELQVKILVP 118
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++E+ + L++ + V +KEI+ Q+A + + GD +D+
Sbjct: 119 VEPEVELGEYKGLEIKKTRVTVTKKEIEEQLANYQSQFAELSVKEGGKVAKGDTAVIDFE 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D V E S +N +GS + L+G+ ++EI FP+D+ DLAGK
Sbjct: 179 GFIDGVAFEGGSGENYPLEIGSGSFVPGFEDQLIGMGVDKEQEITIKFPDDYGAVDLAGK 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG---FESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ ++ E+ ++++LA + E+ ++ IK E QK
Sbjct: 239 EATFKVTVHEIKEKHLPEIDDELAKDVNIDGVETLDQLKDHIKANIKARKENENEQKFMN 298
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
I + + E+L++ E IL+++ + S Q + L+
Sbjct: 299 DIYQTLIKNSKIENSEALIKQEQQMILKEIEQNLQSQGLNFDIYKQFTGKDVPDILEDIK 358
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+ R ++ I ++ + ++EE+++ L + ++ + F+ ++
Sbjct: 359 PQAEERFKINAIIKAIIKEEKLVASDEELEAELQSIADYYKKELDEVKNIFKGN---MSR 415
Query: 412 LRAPIFEDKVIDHILKSVQ 430
+ I K ID + +++
Sbjct: 416 VENDILTRKAIDLVKDNLK 434
>gi|323126555|gb|ADX23852.1| trigger factor [Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
Length = 427
Score = 164 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 85/441 (19%), Positives = 177/441 (40%), Gaps = 23/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTIGQDKIKPALDQAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 61 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGQEWTLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V + EV ++E+D ++ N VKE + +GD V +D+
Sbjct: 112 TKPEVKLGDYKNLAVEVEASKEVTDEEVDAKVERERANLAELVVKEDAAALGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K GD+ E+ FPE + +DLAGK
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAKAGDEVEVNVTFPEAYQAEDLAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ EV + ++++LA E+ + ++ ++++ E V+
Sbjct: 232 DAKFVTTVHEVKTKEVPELDDELAKDIDEEVETLADLKAKYRKELEAAKEIAYDDAVEGA 291
Query: 297 ILD-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
++ ++N ++PE +V +E + + + M + E+ Y
Sbjct: 292 AIELAVANAEIVELPEEMVHDEVHRSMNEFMGNMQRQGISPEMYFQLTGTSQEDLHNQYQ 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +V+ I + E TEEE++ + + +++
Sbjct: 352 ADADKRVKTNLVIEAIAKAEGFEATEEEIEQEINDLATEYNMPVEQVRSLLSAD-----M 406
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I K ++ I S +
Sbjct: 407 LKHDITMKKAVEAITSSAIVK 427
>gi|241888674|ref|ZP_04775981.1| trigger factor [Gemella haemolysans ATCC 10379]
gi|241864697|gb|EER69072.1| trigger factor [Gemella haemolysans ATCC 10379]
Length = 422
Score = 164 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 77/430 (17%), Positives = 168/430 (39%), Gaps = 22/430 (5%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSE 65
E K + ++ + + N GFR GK+P + +YG+ + +
Sbjct: 6 NKEDGKVVIAFSATKEEFAKGLDQAFKRAVKRVNAPGFRKGKLPRAVFNKMYGEEALFQD 65
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
+D ++ + + + + P I + E + +K + P +E
Sbjct: 66 AVDFVLPAAYTKAIDELEVSPLAMPDIDVKEISKE---------EGVKFEAVVTVKPNVE 116
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ + +L + ++ EV + +++ ++ + +++KE ES+ GD V +D+ + +
Sbjct: 117 LGEYKNLGLEKESVEVTDADVEERLDSLLSRQAEWQIKEGESKKGDIVVIDFKGFIGDEA 176
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
E K + +GS E L G E+ FPE++ + DLAGK + +
Sbjct: 177 FEGGEAKGYELELGSGSFIPGFEEQLEGKVAPVDTEVNVTFPENYQVADLAGKAAKFEVT 236
Query: 246 IKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
+ +V + + ++ E + + + ++IK E L + +++
Sbjct: 237 VHDVKEKVLPELTDEFVKEFTKEAASTVAEYKEKLKEEIKLEKENLAEKSYSDKVISTAV 296
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLAKRRV 358
VPE LVE E N + ++ +S Q + + A+ ++
Sbjct: 297 ENAKVSVPEKLVEQEVNSMFEQFTGNLSRQGLSFDLYEQFTGKGEADLKAEMKSDAENKI 356
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T VLG I E +EVTE ++ + + + + E+ + + +LR +
Sbjct: 357 KTSFVLGEIAEVEKVEVTEADIDAEVKELATMYNMTEEGIKQRIS-----VEDLRGELVI 411
Query: 419 DKVIDHILKS 428
K +D + +
Sbjct: 412 QKTVDFLKAN 421
>gi|12230734|sp|Q9RLJ3|TIG_OENOE RecName: Full=Trigger factor; Short=TF
gi|6273580|emb|CAB60144.1| trigger factor [Oenococcus oeni]
Length = 438
Score = 164 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 85/445 (19%), Positives = 173/445 (38%), Gaps = 25/445 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
K +G K L IP+ +++ ++ + K NI GFR G V + +G+
Sbjct: 8 NATFKAGKGNKGTLSFEIPAKQISSGIDQAFNKQKDKINIPGFRKGHVSKELFLARFGEE 67
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + ++ I+ +I + +++ D +P I ++ K+ +
Sbjct: 68 ALYEDALNAILPDIYDQAVNEADITVVGQPQI---------IPDDLKHGGPSKIHAEVTL 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
P +E+ + ++V ++ EV +KE++ ++ + K ++ SE GD V +D+
Sbjct: 119 APTVELGDYKGVEVEKESDEVSDKELNAELERLQKGEAELVPAKEDQVSEKGDTVVIDFD 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD + +N +GS + LVG K GD +++ FP+D+ K+LAGK
Sbjct: 179 GSVDGKQFDGGKAQNFSLSLGSGQFIPGFEDQLVGHKAGDDVDVKVTFPKDYQAKNLAGK 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG-----FESESAMRGLCSQKIKQHSEFLVRQKV 293
+ +I E+ ++N+ A + E A K K +
Sbjct: 239 EAVFAVTIHELKKLETPALDNEFAKDVDDSVLVLEELKAKTKEKLAKDKAEKNKDAFEDA 298
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED---LQYY 350
Q + + +PE ++ ++ + +Q ++ K + I +
Sbjct: 299 AIQKVVDGAKINPEKLPEEMINDDVSRQMQTFFNNLAGQGVKPEMYFQIPNQPGAVKATN 358
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
RV T +VL I I + EE+ + + E ++
Sbjct: 359 DRRRTNRVKTNLVLEEIARVEKINPSNEEIDKEIKSLASEYNIKESEVEKSVSA-----G 413
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRK 435
L + + ++ I+ S Q V++K
Sbjct: 414 MLSHDLKVQQAVELIVNSAQAVEKK 438
>gi|268317953|ref|YP_003291672.1| trigger factor [Rhodothermus marinus DSM 4252]
gi|262335487|gb|ACY49284.1| trigger factor [Rhodothermus marinus DSM 4252]
Length = 450
Score = 164 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 78/442 (17%), Positives = 181/442 (40%), Gaps = 24/442 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ K ++ EL + +P+ L + + IR+ +KGFRPGK PLS +K LYG
Sbjct: 1 MQTEIKEISSVEYELRLHVPAEELQPELDRLLRQIRAHVQLKGFRPGKAPLSLVKKLYGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRD-ERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E + I+E + + + + R RP + + DL L +
Sbjct: 61 EVALELAERKIREALEQAVLEPGTYRVIGRPRV---------LRLDYKPDADLHAVLRFG 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+ D + + +V ++E++ + + K ++ +G + +
Sbjct: 112 VRPEFELKPLDQETIPHLVHQVTDEEVEEAIKRLQKEEAELVDLPADTPLGAEDYAVVDL 171
Query: 180 ----SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
+ + ++ V F + L E + L+G K G+ ++ ++ + +
Sbjct: 172 QRLDEATGAPIIGEKEEGVSFFLDDPRLREELRQALLGKKAGETVRVDLPHGDEETGEPA 231
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRL---GFESESAMRGLCSQKIKQHSEFLVRQK 292
R ++E ++ + ++ E+ +R L ++++ + R+
Sbjct: 232 --HAHRYEVRVRETKRRELPALDAEFIQKISHGQVSDEAGLRELVRKELQARWDQESREL 289
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHM 352
++++I+ + + VPES VE + ++ VR + + + +
Sbjct: 290 LEQEIMHRLLTLHPIPVPESAVEMVLDEFVEDVRQRNNGRLPEGFD----ETAFRHANRA 345
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAE 411
LA+++ + + E IEVTE ++Q+ +Q +++ ++ P + +
Sbjct: 346 LAEQQARWTFIFDKVVETFGIEVTEADIQAFFEKQADPESGLSAEQLRQFYESVPGLIDQ 405
Query: 412 LRAPIFEDKVIDHILKSVQIVD 433
+R+ + KV D + + ++ D
Sbjct: 406 VRSRLLHQKVFDTLAERFKLED 427
>gi|294054262|ref|YP_003547920.1| trigger factor [Coraliomargarita akajimensis DSM 45221]
gi|293613595|gb|ADE53750.1| trigger factor [Coraliomargarita akajimensis DSM 45221]
Length = 440
Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats.
Identities = 93/439 (21%), Positives = 191/439 (43%), Gaps = 19/439 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ K ++ + V ++ + + ++D + +A I GFRPGK P + +++ + K
Sbjct: 5 KTDVKEINETRKTIIVSFTADEVAAQETQLVKDYQRQAKIPGFRPGKAPENMVRTRFSKD 64
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I S+ + II + E ++ D D+ G I + D ++ + DI+
Sbjct: 65 IASDLKNRIISQAHQEGVNGSDLNIYG---------IVDLEEGEITASSDAQIIFTVDIV 115
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P+ E+ S++ L+V + E+EI+ +I + V E +E GD V Y +
Sbjct: 116 PEFEVPSYEGLKVQTPSTDATEEEIENMYKQILSQRAEYNVVEKAAEKGDYVKCGYEGKI 175
Query: 182 DNVILED--------QSKKNVQFIVGSADL--FSETTEILVGLKTGDQKEIERFFPEDHS 231
+ ++ + ++K G+ + + +VG+K GD+KE+ FPED
Sbjct: 176 GDELVAELAPEAAMYGTQKVTWEEAGAENAPGVQAIVDGIVGMKAGDEKEVTMDFPEDFR 235
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ 291
++ LAGK + ++EV + + D L + E +R ++ I + Q
Sbjct: 236 VEALAGKSAVYSVKVEEVREKVMPELTEDFFKSLQVKDEEELRTQITESIANQKQQQNFQ 295
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
++QI D ++ +PES +++E + IL+ ++ + + +
Sbjct: 296 AERQQITDQLNAAVELALPESGLKSETDAILRDFMQRNMQQGATQEDFEKQKDSLHEGAS 355
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A R+ + +LG I EK I+V E+ + Q + +K++ QK + +
Sbjct: 356 EAAVSRLKSRFILGKIAEKEKIKVENEDFSQIIMNQAMQTGQKPEKIVKELQKDQGRINQ 415
Query: 412 LRAPIFEDKVIDHILKSVQ 430
+R I K +D +++ +
Sbjct: 416 MRVDILLGKTMDLLVEKAE 434
>gi|254457647|ref|ZP_05071075.1| trigger factor [Campylobacterales bacterium GD 1]
gi|207086439|gb|EDZ63723.1| trigger factor [Campylobacterales bacterium GD 1]
Length = 433
Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats.
Identities = 84/444 (18%), Positives = 197/444 (44%), Gaps = 23/444 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ +G ++ I + + + +++ A+I+GFR GKVP++ +K YG+
Sbjct: 1 MEIKSNKIDGANATIEATILREVIDVNLEKIAKELAKTASIQGFRKGKVPVAIVKKQYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
++ + E +++++ L + + P+I S + +++ +
Sbjct: 61 RLVQDAEAEALRDVLARGLEELNISNDALIGEPNI----------SKFDKSDDKIEVVVK 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTV 175
+ P IE+ + + D V ++ +++++ ++A+ + + + GD +
Sbjct: 111 VAMRPVIELGDYSSMIKEFDKPAVSDEAVEKRIKDLAEAQAPLIEVARNRKMKDGDTAVI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ SVD + E + +N + +GS + L+G+K + IE FPE++ K+L
Sbjct: 171 DFEGSVDGKVFEGGTAENFELRLGSGQFIPGFEDQLIGVKRDEAVVIEVTFPENYGGKEL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
AGK + + V ++++LA ++ E+A ++++ E K+
Sbjct: 231 AGKAASFKVKVNGIKVKDEVAIDDELAKKMLPGDENATLAELQKQVRIQIENEELAKLYN 290
Query: 296 Q-----ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+L+ FD+PE +V+ E + L + MS Q+ ++ + E
Sbjct: 291 DDLKPALLENFVENIKFDLPEFVVDQEIDMALNRKAQSMSEEEIQELRDSEEKLNELRDT 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A+R V ++ + N++V E+E+ +Y + + +K + + K +
Sbjct: 351 FREDAQRSVRATFIIDALANAENVKVEEQEVMQTIYYEAMQMGQDPQKAYEQY-KNAGYI 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVD 433
++ + EDKV+ +L + +I +
Sbjct: 410 PAVQMSMVEDKVLSQLL-NSKIKE 432
>gi|257065887|ref|YP_003152143.1| trigger factor [Anaerococcus prevotii DSM 20548]
gi|256797767|gb|ACV28422.1| trigger factor [Anaerococcus prevotii DSM 20548]
Length = 451
Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats.
Identities = 78/432 (18%), Positives = 175/432 (40%), Gaps = 16/432 (3%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-LS 64
K E + + +P + + + + +S+ + GFRPG V ++ +YG I
Sbjct: 5 KSHENNIAKFEFDVPYDEFKKATDTVYKRNKSRYRVDGFRPGHVSRKVLEKMYGPEIFYD 64
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
E I + + + + +PS+ +++ IE D+ ++ + P
Sbjct: 65 EAIKIVFPTPYEKAVEELGLEVIDQPSVDLDD---------IEKGKDITFKVEVETKPHP 115
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYTVSVDN 183
E+ + +L V + EV +++++ ++ + N E E++ GD V +D+ +D
Sbjct: 116 ELGDYSELIVEEVSSEVTDEDVEAELKKQQDENARLVPVEDGEAKEGDTVNIDFDGFLDG 175
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E +N ++GS + G K GD+ ++ FPED+ K+ GK +
Sbjct: 176 ERFEGGKAENYDLVLGSNTFIEGFEGQVEGHKVGDKFDVNVTFPEDYQAKEFQGKDAKFE 235
Query: 244 FSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
I + ++++ A F++ ++ +K+ + + + ++ Q ++ +
Sbjct: 236 VEINSITRKELPELDDEFAKDISEFDTLDELKNNLREKLAEEKKDYAKNLIQNQAIEALV 295
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHMLAKRRV 358
NK P +V+ E + LQ + + + + D Y A+ RV
Sbjct: 296 NKSEVSAPRPMVDAEIDYELQNLDQRLQQMGITLAQYIEMTKMDINQIRDQYRAQAEARV 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+V+ + K IEVTEEE ++ + + + + + + L I
Sbjct: 356 KANLVIDEVALKEGIEVTEEEKENEIKEAAENYGVDDLEKFKELFAKNISDKTLEENIMR 415
Query: 419 DKVIDHILKSVQ 430
K ++ + ++ +
Sbjct: 416 RKAVELLTENAK 427
>gi|56751594|ref|YP_172295.1| trigger factor [Synechococcus elongatus PCC 6301]
gi|67461644|sp|Q5N1P5|TIG_SYNP6 RecName: Full=Trigger factor; Short=TF
gi|56686553|dbj|BAD79775.1| trigger factor [Synechococcus elongatus PCC 6301]
Length = 474
Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats.
Identities = 58/404 (14%), Positives = 162/404 (40%), Gaps = 11/404 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+V ++ + L + + + + + + + GFRPGKVP + G+
Sbjct: 4 KVTQEKLPASRVGLQIEVSGEQSRQVYERTLTRLSREVRFPGFRPGKVPRPVLIQRLGET 63
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + I++++++ + +++ A ++ + + + S D+
Sbjct: 64 ALKANAIEDLVQQSLESAIAQESIPAIGNYQLSSD---FETLVAAFQPGKSFSFEASVDV 120
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDY 177
P ++ + L V D +D +AE K E + +
Sbjct: 121 QPTATLAQYTGLTVEVAEVPFDANRVDNVLAEQQKQMATLVPVEGRNAAIGDVAVIDFQG 180
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ + S + Q V +VG+ + + ++ FPE ++ +++AG
Sbjct: 181 ILVESGEEIPGGSGTDFQIEVEEDRFIPGFISGIVGMAIEETRTVDATFPETYAQEEVAG 240
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K + ++KE+ + +++ A +E+ ++ +++ + E V+ +
Sbjct: 241 KAAQFTITLKELKTRDLPELDDAFAQEASQYETIEELKTALTERFQAEHESEVKASKRDA 300
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
IL ++++ ++PESL++ E + ++ + +S + + + + E +
Sbjct: 301 ILTALADQLDVEIPESLLQREISAMINETASRLSGQGMDVRKLFTEEVLERLRENSKDED 360
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKM 398
++R+ I LG + + +V +E +++ + L +P +++
Sbjct: 361 EQRLRRTIALGELAKVTETQVDDEAVKARAAELLSNYP-RPQEV 403
>gi|160947718|ref|ZP_02094885.1| hypothetical protein PEPMIC_01653 [Parvimonas micra ATCC 33270]
gi|158446852|gb|EDP23847.1| hypothetical protein PEPMIC_01653 [Parvimonas micra ATCC 33270]
Length = 441
Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats.
Identities = 87/450 (19%), Positives = 178/450 (39%), Gaps = 19/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K I S S N ++S+ NI GFR GK P I+ YG+
Sbjct: 1 MNTKLVSRDEKKIVFTSEISSEAFEASVNRVYNKMKSRFNIPGFRKGKAPRKIIELNYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDE--RAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + ++E++ E+ E + + P I I E + + ++
Sbjct: 61 GIFFEDAVNELLPELFEEAVKELKIGKDICGMPKIDIEE---------FDKNKAIVIKFD 111
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVD 176
++ P E+ + +L EV ++ +D ++ + +NN ++ + D V +D
Sbjct: 112 QELKPVPELGDYKNLVADDVKFEVTDEMVDERVNKERENNARIVSIEDRPIKDMDTVNID 171
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ SV+ V + +N +VGS E L+G GD ++ FPE++ ++L
Sbjct: 172 FEGSVEGVPFDGGKSENYDLVVGSHTFIPGFEEQLIGKNIGDNVDVNVIFPEEYHSEELK 231
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
GK+ I + ++++ A F++ R + + + +E + +
Sbjct: 232 GKEALFKVKINSIKEKQLPELDDEFAQDVSEFDTLEEYRADIKKNLVESAEKNALVQKQN 291
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYH 351
+D + + PES++ E + + + N N + +E +
Sbjct: 292 NAIDALIESSNVEAPESMINEEVDKAFRDFAGRIRQYNMDLDNYFKMLNTTEEAVREQLR 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +R +V+ + NIEV+EEE+ + + + + K L
Sbjct: 352 PEATKRANAELVIDAFAKLENIEVSEEEIDKEIDEFGKNMKVKDFEEFKKELKSGEGLEG 411
Query: 412 LRAPIFEDKVIDHILKSVQIVD-RKVTFDQ 440
+ A + K +DH++ V+ + +K T ++
Sbjct: 412 ITASLIRRKAVDHLVSLVKFQEPKKETVEE 441
>gi|325284008|ref|YP_004256549.1| Trigger factor [Deinococcus proteolyticus MRP]
gi|324315817|gb|ADY26932.1| Trigger factor [Deinococcus proteolyticus MRP]
Length = 441
Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats.
Identities = 80/467 (17%), Positives = 184/467 (39%), Gaps = 38/467 (8%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSE 65
EG + E V +P+N + +F+ + + + + GFRPGK P I+ G+ + SE
Sbjct: 6 KKEGHQVEFKVEVPANEVNSAFDAVWKGLAQQVRVPGFRPGKAPRRVIEKRVGEGYVESE 65
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
+ ++ P+ + + + +++I ++ + D+ P++
Sbjct: 66 VQNRLVNAHFPQAVRELELSLV----------DANIEPQDVKSGETFSFTVKGDLYPEVT 115
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+S + L ++ E+ ++ +DR +A++ + +FE E E D+VTV+ +
Sbjct: 116 LSDWSGLSLSAAAPEITDEVVDRTLADMQERAASFEQVERAIEATDQVTVEEEGEEGSYP 175
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ + L+G GD+ EI E + K
Sbjct: 176 IY------------MDMAGEHIQQALLGKNVGDEVEISVPAQEGEDDTPVKVK------- 216
Query: 246 IKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
+ + S +N+D A + FE+ +R +++++ ++ + + L +
Sbjct: 217 VLGIKSKTLPELNDDFAGTMQFENMDKLRSTLREELERRAQGEGDNARREEFLSALIEGM 276
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID------EEDLQYYHMLAKRRVL 359
T D+P+SL++ + ++ +++ ++S + +S +E +Q A++RV
Sbjct: 277 TVDIPQSLLQRRQDDLMNEIKNDLSRQGVRWSEYESFMQEQGKLDEFMQELGKNAEQRVK 336
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+ LG + E ++VT++E L +++ L I
Sbjct: 337 RDLALGKLAEDLKVQVTDQEFGQNLMAMAQMSGMSPQELQSQMG--AGGLNAFYTDILRS 394
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
K ++ L + ++ ++ SS+S + + E E
Sbjct: 395 KALNQALAQLSGEGQESKTEEAKAESSDSQETAEGQTAEQGEQSSEE 441
>gi|255030317|ref|ZP_05302268.1| trigger factor [Listeria monocytogenes LO28]
Length = 377
Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats.
Identities = 82/386 (21%), Positives = 161/386 (41%), Gaps = 17/386 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG +L I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + P + I E L
Sbjct: 61 EALFQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESM---------EKGETWVLTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV-DYT 178
+ P++++ + L+V + E+ +E++ ++ ++ + VKE + D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V + E+ + ++++LA E+ ++ S+++++ E V Q + +
Sbjct: 232 PVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRLQEAKEESVAQAKQEE 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
++ D+P ++V +E + ++ ++ + Q +E
Sbjct: 292 VIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMEK 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEE 378
A++RV +VL I E NIE TEE
Sbjct: 352 DAEKRVKMNLVLEAIAEAENIEPTEE 377
>gi|167746335|ref|ZP_02418462.1| hypothetical protein ANACAC_01044 [Anaerostipes caccae DSM 14662]
gi|167654328|gb|EDR98457.1| hypothetical protein ANACAC_01044 [Anaerostipes caccae DSM 14662]
Length = 428
Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats.
Identities = 84/439 (19%), Positives = 181/439 (41%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + ++ + + +L + + +S+ ++ GFR GKVP + I+ YG
Sbjct: 1 MGLQVEKLDNNMVKVTIEVEPEKLDAAIKKAYNKKKSQFSVPGFRKGKVPQNFIEKAYGV 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + +I E E + D RP I + + +E
Sbjct: 61 EVFYEDAANILIPEAYSESMKDSDLDIVSRPDIDVVQ---------LEKGKPFIFTAEIA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYT 178
+ P++ + + L+V + V ++EI+ Q+ + + N V++ + GD +DY+
Sbjct: 112 VKPEVTLGEYKGLEVEEKKIRVTKEEIEEQLKKEQEANAREITVEDRPVKDGDITLIDYS 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD E + ++ ++GS E L+G GD+ E+ FPE + +LAGK
Sbjct: 172 GSVDGEKFEGGTAEDQTLVIGSGTFIEGFEEQLIGKNIGDEIEVNVTFPEQYHAPELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
IK + ++++ A FE+ + + IK E + + + +
Sbjct: 232 PAVFEVKIKGIKEKELPELDDEFASEVSEFETLEDYKKEIKKNIKAQKEEAAKTEKENAL 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHML 353
+D + D+P++++E + + + +S + ++ +
Sbjct: 292 VDQAVENASMDIPDAMIEEQVQQMADEFSQRLSYQGLNMEQYLQYTGSDAQKFAEELKPQ 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +R+ T +VL I +IE +EE+ + L + G + +++ Q + ++
Sbjct: 352 ALKRIQTRLVLEAIAAAESIEASEEDFKKELEKMAGMYQMETEQLEKMVQ--GSQKEQMM 409
Query: 414 APIFEDKVIDHILKSVQIV 432
I K +D ++ S Q
Sbjct: 410 DDIAVQKAVDFLISSCQTK 428
>gi|310778377|ref|YP_003966710.1| trigger factor [Ilyobacter polytropus DSM 2926]
gi|309747700|gb|ADO82362.1| trigger factor [Ilyobacter polytropus DSM 2926]
Length = 429
Score = 163 bits (411), Expect = 6e-38, Method: Composition-based stats.
Identities = 78/439 (17%), Positives = 187/439 (42%), Gaps = 19/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K E E+ +++ + +E I+++ KA++ GFR GK P S I+S + +
Sbjct: 1 MNYEIKKLENSTVEISLVLEGAEVKGYKDEVIKNLAGKADVPGFRKGKAPSSAIESKFKE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E +++++ +L + + + + +E + L D+
Sbjct: 61 VIQEEVTEKVLQAHYETVLKETGLKPV---------NFVNSANVELEDEKYVGKFL-VDV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE--TESEIGDKVTVDYT 178
P+ E++++ L+ ++ E++++ ++ ++ + + +++I D + + +
Sbjct: 111 YPEFEVANYKGLEAEKETFEMNDEVLNSEIELMIEKESKLADAPEGYKAQIDDTLDLAFE 170
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E + +GS + E LVG + G + E+ FPE++ +LAGK
Sbjct: 171 GFIDGEAFEGGKADSHMLKLGSKMFIGDFEEQLVGYEAGQEGEVNVSFPENYHAPNLAGK 230
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ V +N++ A GFES ++ + +IK+ E + + ++L
Sbjct: 231 PALFKVKVNAVKVMEKPELNDEFAKAQGFESVEDLKAKKAVEIKEREEARTVNEYRGKLL 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLA 354
+ + +P S++E E G + ++ ++S+ + E+ + +A
Sbjct: 291 QQVVDNTEMALPNSMIEREIKGRITEMEQQLSTQGIGLDMYLKMSGVTMEKMNEQLRPMA 350
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LAE 411
++V ++L I +I V++EE+ + + + +K+ + K N
Sbjct: 351 AQKVKLDVILDAIATAEDITVSDEELADKMEEVAKMYGMDTEKLNEELTKAGNLNTFKEN 410
Query: 412 LRAPIFEDKVIDHILKSVQ 430
++ K +D I+ + +
Sbjct: 411 VKIDTRIQKTMDFIVNNAK 429
>gi|223984577|ref|ZP_03634704.1| hypothetical protein HOLDEFILI_02000 [Holdemania filiformis DSM
12042]
gi|223963424|gb|EEF67809.1| hypothetical protein HOLDEFILI_02000 [Holdemania filiformis DSM
12042]
Length = 424
Score = 163 bits (411), Expect = 7e-38, Method: Composition-based stats.
Identities = 80/434 (18%), Positives = 175/434 (40%), Gaps = 24/434 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLY-GKSI 62
E EL V I + + + + I GFR G VP + K + I
Sbjct: 3 TWTLKEKSTGELKVTIEGENWKTAQTKAFNKLAKELEIPGFRKGSVPAAMAKKYVPAQKI 62
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
+ E ++ ++++ + + RP + + E + + ++ I P
Sbjct: 63 MLEAVEHCAQDLLDAGIEEHSLWPISRPELNVEEISEEAA----------TMSFTFAIKP 112
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYTVSV 181
++++ + L + V E+E++ ++ I +N E + E E GD +D+
Sbjct: 113 EVKLGEYKGLAYEVEETSVSEEEVEAELKRIQENFAELEVKENGEVENGDTAVIDFEGFK 172
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V E +N +GS E ++G+K + K+I FPE++ +LAG+ V
Sbjct: 173 DGVAFEGGKGENYPLEIGSNSFIPGFEEQVIGMKKEETKDINVTFPENYQAAELAGQPVV 232
Query: 242 LNFSIKEVFSPLPVVVNNDLAV---RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ E+ + + +N+DLA E+ ++ L + ++ + + +++
Sbjct: 233 FKVTVHEIKAKVLPELNDDLAKDVNAPDVETMDDLKALIRKNQEEQKQQNAENEATNKLI 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLA 354
+ + ++PE +++NE + ++Q + Q Q +E + A
Sbjct: 293 STVVDACEVEIPEVMIKNETDDMIQDYANRLQQQGISLTQFFQITGQSEETLREQMAKDA 352
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ +V +VL I + N+EV EE++ + ++ ++K+ + +
Sbjct: 353 ESKVKLRLVLDAIATQENLEVGEEDIDTEYGLIASQYNMEKEKVKELIPAS-----SISY 407
Query: 415 PIFEDKVIDHILKS 428
+ K +D I S
Sbjct: 408 DVRLRKALDLIKDS 421
>gi|94984540|ref|YP_603904.1| trigger factor-like protein [Deinococcus geothermalis DSM 11300]
gi|118574069|sp|Q1J199|TIG_DEIGD RecName: Full=Trigger factor; Short=TF
gi|94554821|gb|ABF44735.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Deinococcus
geothermalis DSM 11300]
Length = 449
Score = 163 bits (411), Expect = 7e-38, Method: Composition-based stats.
Identities = 65/469 (13%), Positives = 174/469 (37%), Gaps = 36/469 (7%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSE 65
EG K V +P+ + ++++ + + GFRPGK P ++S GK + +E
Sbjct: 6 SKEGNKVSFRVAVPAAEVNRAYDQVWAGLARDVRVPGFRPGKAPRKVLESRVGKGYVENE 65
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
D +++ P+ + ++ I + + + P++
Sbjct: 66 VRDRLLQVHYPQAARELKLSLV----------DARIEPEPLVSGQPFSFTVRGETYPEVT 115
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ + +Q+T E+ ++ ++R ++++ + N F+ E E D+VT++
Sbjct: 116 LGDWRAVQLTATAPEITDEVLNRTLSDLQERNATFQTVERPIEATDQVTIEELGEEGGSY 175
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ L+G GD+ EI H D + +
Sbjct: 176 PVYL-----------DVAEPHVRDALIGKNVGDEVEITVPA---HQHGDHEHPEHTVRVR 221
Query: 246 IKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
++ V + ++++ A L FES +R ++++ + + + ++ +
Sbjct: 222 VQSVQTKQLQPLDDEFARSLNFESLDRLRTDLRAELERRARQEGDAARREEFVNQLVEGM 281
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID------EEDLQYYHMLAKRRVL 359
++P++L++ +L++++ ++ K ++ +E L A+ RV
Sbjct: 282 QVEIPQALIDRRREAMLEEIQDDLGRQGVKWSEYENFMREQGKLDEFLSDLAKNAESRVK 341
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+ L + E +++++ E + + +++ PN + + +
Sbjct: 342 RDLALEKLAEDLGVQLSDAEFSNTMNALAQANGLTPQQLQRQLG--PNGINAYYISLTRE 399
Query: 420 KVIDHILKSVQIVDRKVT-FDQLFDNSSESSPEKLLDKSSKVETFQSEE 467
K + L + ++V + + + E+ + +E+
Sbjct: 400 KALQQAL--ATLNGQQVAGRQEAGAEQTAQAAEQESGQPQAEGEQAAEQ 446
>gi|3688204|emb|CAA09089.1| trigger factor [Caulobacter crescentus CB15]
Length = 334
Score = 163 bits (411), Expect = 8e-38, Method: Composition-based stats.
Identities = 88/330 (26%), Positives = 176/330 (53%), Gaps = 3/330 (0%)
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---EIGDKVTVDYTV 179
+ E +++ + + +V ++E+ + E+AK +E + +S + GD++ +D+
Sbjct: 1 EFEPIDPTSIELVKPVYKVSDEEVQEALDELAKQARTYEPRTGKSLKAKDGDQLLIDFVG 60
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++D V + + ++GS + LVG K GD ++ FPE++ KDLAGK
Sbjct: 61 TIDGVEFAGGKAEGAELVLGSGQFIPGFEDQLVGAKRGDDVVVKVKFPEEYQAKDLAGKD 120
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++EV +P+ +++LA RLG +A+ L + + R K+KR +LD
Sbjct: 121 AEFATKVQEVRAPVDGKADDELAKRLGLSDLAALTELLKSNLAGRYDNSSRFKLKRALLD 180
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ K+ F +P +V+ E+ GI Q+V + + ++ + +++ Y +A+RRV
Sbjct: 181 VLDTKHDFPLPPRMVDAEFAGIWQQVEADKARGGLPPEDAEKTEDQLKDEYKKIAERRVR 240
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
G+VL IG KN++ VT++E+ A+ ++ ++ +++ D +++ + A LRAPI+ED
Sbjct: 241 LGLVLAEIGRKNDVVVTDQELTDAIMREARQYGAQAQQVFDMYRQRADLQAALRAPIYED 300
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
KV+D I +I +++V+ D+L +
Sbjct: 301 KVVDLIFGKAKIEEKEVSKDELLEEDDLPE 330
>gi|282851693|ref|ZP_06261058.1| trigger factor [Lactobacillus gasseri 224-1]
gi|282557661|gb|EFB63258.1| trigger factor [Lactobacillus gasseri 224-1]
Length = 411
Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats.
Identities = 80/425 (18%), Positives = 163/425 (38%), Gaps = 22/425 (5%)
Query: 39 ANIKGFRPGKVPLSHIKSLYGKS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEG 97
+ GFR G V YG+ + + ++ ++ E + + +P IT
Sbjct: 1 MRVPGFRKGHVSRVVFDQFYGEEALYEDALNIVLPEAYAAAVKEAGIDPVGQPQITPVSM 60
Query: 98 ESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNN 157
+ +++ + + P++++ + ++V + V K++D ++ + + N
Sbjct: 61 ---------DKNKPWEMKATVSVKPEVKLGDYKGIEVPKQSTRVLVKDVDAELNKRREQN 111
Query: 158 VAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG 217
+K+ ++ GD VT+DYT ++D + S +N +GS + L+G K G
Sbjct: 112 AELVLKDGKAAKGDTVTIDYTGTIDGKPFDGGSAQNYSLELGSGTFIPGFEDQLIGHKAG 171
Query: 218 DQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES---ESAMR 274
D ++ FPED+ KDLAGK+ I EV S ++++ A + +
Sbjct: 172 DDVDVVVTFPEDYGAKDLAGKEAHFATKIHEVKSKELPKLDDEFAKDVDDSVESLDELKD 231
Query: 275 GLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ 334
+ K E I + N +VP+++++ + L + M
Sbjct: 232 KIKKDLKKHKEEDAKDAIQDAAIKGAVENATIDEVPQAMIDEDVQNQLNQYLGNMQRQGI 291
Query: 335 KSQNVDS----IDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGR 390
Q + + + A RV T +VL I K ++ + +E++ +
Sbjct: 292 DPQTYFKLTGTTEAQLREQLAKGAAERVKTNLVLEAIVAKEKLDASADEIKQEIKDLAHD 351
Query: 391 FPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
+ EK + L+ I K ID + + V +K T S++
Sbjct: 352 YNMDEKVVRRSLSDD-----MLKHDIAIRKAIDLVADKAKQVAKKATKKSTAKKSTKEDE 406
Query: 451 EKLLD 455
+K
Sbjct: 407 KKADK 411
>gi|328957600|ref|YP_004374986.1| trigger factor [Carnobacterium sp. 17-4]
gi|328673924|gb|AEB29970.1| trigger factor [Carnobacterium sp. 17-4]
Length = 426
Score = 162 bits (410), Expect = 8e-38, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 168/438 (38%), Gaps = 22/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + L I ++ + + ++S ++ GFR GKVP + YG+
Sbjct: 1 MTAKWEKKGTNDGVLTFEISEEKIKEGLDTAFNKVKSTLSVPGFRKGKVPRTIFNKQYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E +++ +P I + E +
Sbjct: 61 EALYEDALNAVLPEAYDAAVAEAGLDPVAQPKIDVKSM---------EKGEAWVVEAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + L V + EV +++++ + E +KE + GD V +DY
Sbjct: 112 VKPEVELGEYKGLTVEKQDREVTGEDVEKNIEEKRAAQAELVLKEDAAVEGDTVVIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D V E +N +GS E LVG+K D+ +++ FPED+ +DL G
Sbjct: 172 FKDGVAFEGGKGENHSLELGSNSFIPGFEEKLVGVKAEDELDVDLTFPEDYHAEDLKGAS 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V + EV + ++++ A E+ + ++ ++ + + V+
Sbjct: 232 VTFKVKVHEVKAKELPALDDEFAKDVDEEVETLAELKEKIKTQLTEAKNASADEAVEESA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
+ + D+P ++V +E + + +M + +++ +
Sbjct: 292 IRQAVDNAKIEDLPWAMVHDEVHRQMDVFLNDMQRQGVSPEMYYQITGTTEKDLHKQMEA 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A R T +VL I E + E TEEE+ + ++ EK + L
Sbjct: 352 DADLRTRTNLVLEAIVEAESFETTEEEVNEEIKNLGEQYGMDEKAVRAALTP-----EML 406
Query: 413 RAPIFEDKVIDHILKSVQ 430
+ I K ID I ++ +
Sbjct: 407 KHDIAMKKAIDLITETAE 424
>gi|219849051|ref|YP_002463484.1| trigger factor [Chloroflexus aggregans DSM 9485]
gi|219543310|gb|ACL25048.1| trigger factor [Chloroflexus aggregans DSM 9485]
Length = 484
Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats.
Identities = 68/496 (13%), Positives = 178/496 (35%), Gaps = 42/496 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + L + + ++ S ++ + K I GFRPGK P I+ +G+
Sbjct: 1 MKVTTEKLPKSLVSLQIEVDRDQFERSLDQAARRLSQKFPIHGFRPGKAPRFLIERTFGR 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ L E +++I + + + P + I+ +
Sbjct: 61 AALIEEATEDLINNAYKKAIQQEQIEVVGPPQLE-----------RIDSVEPFVFTVKVP 109
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF----EVKETESEIGDKVTV 175
+ P + + + ++V + + E+ ++ ++ + + +V E + + +V +
Sbjct: 110 VPPTVTLGDYRSIRVPMSVEPITEEMVEAELRRMREEHVTLQELDEPRPAQQGDQVRVLL 169
Query: 176 DYTVSVDNVILEDQSKKNV---------------------QFIVGSADLFSETTEILVGL 214
V ++ E ++ + + L E E L+G+
Sbjct: 170 STRVEDEDATTEGEAAEEDANGESEAAQAQEDGEPTGSEETLDLEPGHLVDELYEGLIGM 229
Query: 215 KTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMR 274
G++KEI P+DH+ + + GKKV + + + ++ + +R
Sbjct: 230 NIGEKKEIVAVMPDDHAEESIRGKKVTFKVELLGIKRRIVPAWEELPSLVNFEGTLDELR 289
Query: 275 GLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ 334
+++ Q + ++ + + TFD+P+ ++ + +L + +
Sbjct: 290 AKVRADLEEAERRRAEQALLNAYIEQLVEQTTFDIPDVMIHELAHSLLHDQEQQFARYGI 349
Query: 335 KSQNVDSI----DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGR 390
+ V ++ + A+R+ + L + ++ + VT EE+ + + + L
Sbjct: 350 TLEQVLQYRGISHDQAVAELMPEAERQTKVTLALSEVIKREGLAVTPEEIDAEIERILAD 409
Query: 391 FPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
+ + + L+ + + + K+ I + +T + ++SE +
Sbjct: 410 YEEERRPQIRETLTT-QLLSSVANIVLDKKLRALISAIARGEQTAMTTEAAQPDASEPTV 468
Query: 451 EKLLDKSSKVETFQSE 466
E + + S
Sbjct: 469 EAVTAEESSSRPTNET 484
>gi|255994402|ref|ZP_05427537.1| trigger factor [Eubacterium saphenum ATCC 49989]
gi|255993115|gb|EEU03204.1| trigger factor [Eubacterium saphenum ATCC 49989]
Length = 455
Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats.
Identities = 86/448 (19%), Positives = 193/448 (43%), Gaps = 19/448 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ EG L + + E E +S+ ++ GFR GK P I++ +GK
Sbjct: 1 MKKTLVSKEGKSANLTFECTKDEFAKACMEAYEKNKSRYSVDGFRKGKAPKKIIEAKFGK 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ E ++ +IK+ P+ L + + P + I+ K ++ +
Sbjct: 61 DVFFDEAVNLLIKDEYPKALDEFELDPVDMPKVDFE---------YIDADKGFKADITVE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
I+P++ + + DL+V + ++ +K +D + K N + + +++ GD +DY
Sbjct: 112 IMPEVTLKKYKDLEVEKVNTKILKKNVDEAIELERKKNARIQPVDRKAKNGDIAVIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D V E + K +GS E LVG K GD+K++ FP+++ +DLAG
Sbjct: 172 FKDGVAFEGGTAKGFSLKLGSKSFIDGFEEGLVGTKAGDEKDLNLTFPKEYHAEDLAGAD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
V + E+ +++D +++ R +++K+ ++ K+K + +
Sbjct: 232 VVFKVKVNEIKEEEIPKLDDDFVKEISEYDTVKEYRDAKKEELKKSAKASDENKMKTKAI 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY----YHMLA 354
+ + + DVP+ L++ E + ++ ++ + + + + A
Sbjct: 292 EMLIKENPLDVPDGLIKMEVDSMISEMAQNLQMQGVSLDDYVKMMGSSKEDLKLSMKPDA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ RV T +++ + + NIE E+E++ ++ E K+ D + + ++
Sbjct: 352 ESRVKTRMLVEAVVKAENIEAEEDEVKEKYKLLATQYGVEEDKIEDIIK--VQGIEYIKK 409
Query: 415 PIFEDKVIDHILKSVQIVD--RKVTFDQ 440
I K +D + ++ + +D +K ++
Sbjct: 410 DIAMQKALDFLCENAKFIDAVKKEEKEE 437
>gi|291542672|emb|CBL15782.1| trigger factor [Ruminococcus bromii L2-63]
Length = 426
Score = 162 bits (410), Expect = 9e-38, Method: Composition-based stats.
Identities = 75/434 (17%), Positives = 171/434 (39%), Gaps = 22/434 (5%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-LS 64
K + EL+V + ++ N + NI GFR GK P I+ +YG +
Sbjct: 8 KKEQANSYELEVNVDGETFGNAVNRVYKKQVKSINIPGFRKGKAPRHVIEKMYGSEVFYE 67
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
+ + + + + E + + + + + + + P++
Sbjct: 68 DAMQDCYPDALYEAAKEAGIKIVS----------VETLEAIEASKEGFSFKANVVVEPEM 117
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSVDN 183
EI+++ ++VT+ EV ++ +D ++ ++ N + ++ D +D+ VD
Sbjct: 118 EINNYLGIEVTKKSTEVTDELVDEEIEKVRDRNSRMVTVDDRAAQNDDVAVIDFEGFVDG 177
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E +N +GS + E +VG KTG++ I FP+D+ ++L GK+
Sbjct: 178 EAFEGGKAENYNLKLGSGNFIPGFEEQIVGHKTGEEFTITVKFPDDYQAEELKGKEAEFK 237
Query: 244 FSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
++ E+ + V+++ E+ + + + + + + V QI + +
Sbjct: 238 INLHEIKAKELPEVDDEFVKDVSDKETLDEYKAELKETVAKRLQDEADKDVDNQISEKLM 297
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHMLAKRRV 358
++PE++ +N+ N ++++ + S + D Y A++RV
Sbjct: 298 ELLEGEIPEAMYDNQANEMVREFDMRLRSQGLDMKTYMQYMGMDANALKGMYKEEAEKRV 357
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ L + K NIEVTE ++ + + + K+ + L +
Sbjct: 358 KLRLALEAVARKENIEVTEADLDAEYGKMAEAYKMDVDKVKEAVPA-----ESLTEDVKV 412
Query: 419 DKVIDHILKSVQIV 432
+K ++ + I
Sbjct: 413 EKALNLVKDKAVIK 426
>gi|119026006|ref|YP_909851.1| trigger factor [Bifidobacterium adolescentis ATCC 15703]
gi|166229017|sp|A1A236|TIG_BIFAA RecName: Full=Trigger factor; Short=TF
gi|118765590|dbj|BAF39769.1| trigger factor [Bifidobacterium adolescentis ATCC 15703]
Length = 456
Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats.
Identities = 64/422 (15%), Positives = 156/422 (36%), Gaps = 24/422 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L V + +E ++I + N+ GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTVTVDPEEFNPYLDEARKEIAKQVNVPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + E+ + L + +P I + + + LK + +
Sbjct: 61 GAVAGEAVNNGVPELYSKALETKKIHPMAQPEIDVQD-----VPESAKDETKLKFVATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ + D +++ EV +++I+ ++ + + + + GD +D
Sbjct: 116 RRPDIELPALDGMEIEVAKAEVTDEDINNRLEALRQRFGTLVSVDRPAAKGDYANIDLNA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++ ++ S++ V + +GSA + E L GL G++ E G+K
Sbjct: 176 EINGETVD--SQEGVSYELGSATMLDGLDEALEGLSAGEETSFEGTLEAG----KHEGEK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + V + +++D A F++ ++ + Q +E + +
Sbjct: 230 ALIKVKVNSVKAEELPELDDDFASEASEFDTLDELKEDLKKVAAQDAESRQATAARDAFI 289
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + VP+ + L+ V + + +E ++ +
Sbjct: 290 AKLEDGLEIPVPKGVKAEMVEQQLKNV----------TADPSKATKEQKAEAEETVEKEL 339
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+VL + E +++V++ E+ + L ++ + + + +
Sbjct: 340 RDQMVLDVLAETMDVKVSQGEVFNFLASIAQQYGMDPNAFIQAIIRN-GQIGSAVQEVGR 398
Query: 419 DK 420
K
Sbjct: 399 SK 400
>gi|320528423|ref|ZP_08029585.1| trigger factor [Solobacterium moorei F0204]
gi|320131337|gb|EFW23905.1| trigger factor [Solobacterium moorei F0204]
Length = 478
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 86/479 (17%), Positives = 193/479 (40%), Gaps = 27/479 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
E +L V I D+ + I +I GFR G+ P + I+ +
Sbjct: 15 NWTLKEKSVGDLTVKIEGKEWADAVKKAFNKIAKNVSINGFRKGQAPKALIEKRVSDNER 74
Query: 64 S-ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
+D+ + L +P + I +++ + ++ ++P
Sbjct: 75 FITAVDDNANVWMRAALEAEKLVPISQPQLDIKAVDANGVELVF----------TFAVMP 124
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVD 182
++++ + L+ D V ++EID ++ + + + K+ + GD V +DY D
Sbjct: 125 EVKLGDYKGLEYNLDEVAVSDEEIDAELNRMREQYAEVQTKDGAAAEGDTVNIDYEGFKD 184
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+V + N ++GS E L+G+K G++K++ FPE++ KDL G V
Sbjct: 185 DVAFDGGKGTNYDLVLGSHSFIPGFEEKLIGVKAGEEKDLNLTFPENYHAKDLKGAAVVF 244
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLG---FESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ EV + + VN++ A + E+ + ++ + +I+ + K ++D
Sbjct: 245 KVKVNEVKTKVLPEVNDEFAKDVNAAGVETVADLKNMIRTRIEDGKKSQAENKADTALMD 304
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAK 355
+ D+PE LVE E N +Q++ ++S S+ E+ Y A
Sbjct: 305 KLVENAEIDLPEVLVEEEVNNQIQQLAQQISQYGMNFNQYLSMMGKKIEDVRAEYTDNAT 364
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ ++L I + +E TEE++++ ++ ++ + + L+
Sbjct: 365 KTAKLRLILEEIAKVEALEPTEEDLENEYNNIAAQYNMPVDQVKAYIS-----VDMLKRD 419
Query: 416 IFEDKVIDHILKS----VQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ +K + ++ + + + +E++ EK + K+++ + + EE
Sbjct: 420 VRNEKAYAFVKENAAGGKKPAKKPAKKTTKKADKAEATEEKPVKKTTRKKKSEVEETAK 478
>gi|317508499|ref|ZP_07966166.1| trigger factor [Segniliparus rugosus ATCC BAA-974]
gi|316253190|gb|EFV12593.1| trigger factor [Segniliparus rugosus ATCC BAA-974]
Length = 452
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 74/459 (16%), Positives = 189/459 (41%), Gaps = 25/459 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + LDV IP L +E + + I GFRPGK P I++ G+
Sbjct: 1 MRSTVERLGPTRVRLDVEIPFEELKGELDEAVRVLAHHVRIPGFRPGKAPAQLIRARLGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
ILS+ ++E + E +++ + +P + E + + D
Sbjct: 61 EAILSQLLEEAVPARYNEAVAEAKLQPLGQPKFDLGEQKP-------VFGEPISFSAEVD 113
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++EI FD ++ T D V ++++ ++ + + + +++ GD VTVD
Sbjct: 114 VRPELEIPDFDTIEATVDPLAVSDEDVAERIDRLRQRFRELSPVKRKAKDGDVVTVDVVE 173
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VD +E+ + + +G A+ + ++GLK G++ +++ + + +
Sbjct: 174 LVDGEAVEETKETDQPIDLGDANTPQNLKDAVLGLKEGEKGKVDFETTVEDAQRS----- 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
L ++ V ++ + ++ + ++ +++++ +++ +++
Sbjct: 229 --LELTVTSVKEVKLPELDEEFVQTASSHDTVAELQEATRKELEEERLRGRLNQLRERVV 286
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEM----SSANQKSQNVDSIDEEDLQYYHMLA 354
D + K +PE+++ G + ++ Q Q + + + A
Sbjct: 287 DALIAKIEPPIPEAVLAARVRGQIAQLTQRTGLSPEQFAQFLQIQGKTLSDLEEQFAEAA 346
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELR 413
KR + ++L I +K + E E L + R+ + + ++Y L E+R
Sbjct: 347 KRDLGLQLILDAIADKEGLATAELEQVDDLRLRAARYSGKKADEQRNQIEQYAAMLEEVR 406
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
++ + ++ + ++ + T + + ++++P+
Sbjct: 407 ----RNQALRQVIDAAKVTETDGTVVDVAELFAQAAPKS 441
>gi|270308032|ref|YP_003330090.1| trigger factor [Dehalococcoides sp. VS]
gi|270153924|gb|ACZ61762.1| trigger factor [Dehalococcoides sp. VS]
Length = 447
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 87/460 (18%), Positives = 188/460 (40%), Gaps = 26/460 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V +K EG + + V + S + + ++ + K I GFR GK P + +
Sbjct: 1 MKVTDKKIEGCQASITVEMDSTEVEEGLSKTYRRLVKKVEIPGFRKGKTPRDVFEKYVSR 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E +D+I+ E + + D + P + + T
Sbjct: 61 EKMLDEMVDDIVPEACQQAIKDEDIKPFAAPKVAMVT------------TEPFVFSARIP 108
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P +E+ + ++ T++ E+ E+ ID + ++ +E E +IGD + ++
Sbjct: 109 LPPVVELGDYKTIRATKEKVEITEENIDTVIDQVLHQRATWEKVERSVKIGDMLLMNVES 168
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+++ ++ + E LV + G+ KEI FPEDH+ +LAGK
Sbjct: 169 TLNGEPYLNREDMQYSVREEAIYPAPGFGEHLVDMVVGEPKEISIVFPEDHARAELAGKT 228
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+IKE+ +N+ A F + + +R + +++ + + K + QI
Sbjct: 229 AAFKITIKEIREEKLPELNDAFAHELNPEFNTLAELRQRIRENMQERQDDKAQAKFEDQI 288
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV-----DSIDEEDLQYYHM 352
++ + D PE +VE E + I+++ + S + + E+ Q Y
Sbjct: 289 VEALIKMSKIDYPEVMVEAELDQIIEQQLQRLQSNVKSPEEFRAMLSQMTPEDMQQRYRP 348
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
LA++RV + + LG + N+ ++EE+ + + + +++ + K L
Sbjct: 349 LAEQRVESSLALGKLATAENLIPSDEEVDAEIEKLTQDSGDKKEEEKAFYNKS-ETRDRL 407
Query: 413 RAPIFEDKVIDHILKSV-----QIVDRKVTFDQLFDNSSE 447
+ K + I + ++V+ K + + + +
Sbjct: 408 IQLLTARKTMAFIDEIALQPAIEVVEPKADKGEKTEEADK 447
>gi|187735547|ref|YP_001877659.1| trigger factor [Akkermansia muciniphila ATCC BAA-835]
gi|238691877|sp|B2UQZ3|TIG_AKKM8 RecName: Full=Trigger factor; Short=TF
gi|187425599|gb|ACD04878.1| trigger factor [Akkermansia muciniphila ATCC BAA-835]
Length = 436
Score = 162 bits (408), Expect = 2e-37, Method: Composition-based stats.
Identities = 84/442 (19%), Positives = 181/442 (40%), Gaps = 20/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ L IP+ ++ +KA + GFRPGK P S I+ + K
Sbjct: 1 MEINVDIQPDCTATLKASIPAETTAARRASIVDSYAAKAKLPGFRPGKTPKSIIEKRFKK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E +D + + L + P + + ++ + + +
Sbjct: 61 EMEEELLDTLFETACSTALEEN-------PKLKVLSFGKP--EQSLDDQGNYTATSTMTV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P+ E+ + ++V EV E +++ + +A+ F + ++ D +D+ +
Sbjct: 112 VPEFELPEYKGIEVKVPSSEVTEADVEEALNSLAEQIAEFTPVDRAAQKDDVAIIDFKTT 171
Query: 181 VDNVILEDQSKKNVQFIVG---------SADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
+D + + K V F+ G L GL GD K+I P+
Sbjct: 172 LDGKPVAEAVGKPVGFLEGRDGQWMKVEDDQFLPGFASALEGLNAGDSKDITVTIPDTFP 231
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVR 290
I +L GK++ + ++KEV +++ A ++ ++ ++ + + Q +
Sbjct: 232 ITELRGKELVFHATVKEVREKQLPAMDDAFAEKVLPGKNLEELKTALKENLAQRKAMQID 291
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
+ QI + +++ F++PE++VE E GILQ+ + + ++D EE +
Sbjct: 292 EAKADQITEKLADMLDFNLPEAVVEREVYGILQQKMQQAMYSGNAPADMDKFVEEAREEA 351
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
AKR + +L + + I VTE E+ + + +Q + + K + Q+ +
Sbjct: 352 KQEAKRNLKVFFMLQEVAQVEKIAVTEMELYNEVARQARQQKKNLKSYIRELQR-EGRVH 410
Query: 411 ELRAPIFEDKVIDHILKSVQIV 432
+R + KV+D + K ++
Sbjct: 411 GIRMSLLTAKVLDFLTKEAKVT 432
>gi|218509275|ref|ZP_03507153.1| trigger factor [Rhizobium etli Brasil 5]
Length = 261
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 99/262 (37%), Positives = 167/262 (63%), Gaps = 1/262 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKRE+ V+IP+ + D NER+ D++ K I GFRPGKVP +H+K +YGK
Sbjct: 1 MQVIETLAEGLKREIKVVIPAKDMEDKMNERLADVKDKIRINGFRPGKVPAAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI++E ++EI++E ILS R E++A +P I + E + D ++ D + LSY++
Sbjct: 61 SIMAELVNEIVREQPTAILSSRGEKSATQPEIAMTE-DKDEADKILSAQQDFEFTLSYEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LP IE+ S ++VT+++ ++ + E+ Q+ ++A++ ++E K ++ GD+VT+DY
Sbjct: 120 LPPIELKSVKGIKVTREVIDISDDEVTEQVLKVAESARSYESKTGKAANGDRVTMDYVGK 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + + + ++GS + LVG+K G++K I FP D+ K+LAGK+
Sbjct: 180 VDGEAFEGGTDQGAELVIGSGRFIPGFEDQLVGVKAGEEKTITVTFPADYPAKNLAGKEA 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLA 262
+ ++K+V +P V +N++LA
Sbjct: 240 TFDITVKDVAAPGAVEINDELA 261
>gi|331270306|ref|YP_004396798.1| trigger factor [Clostridium botulinum BKT015925]
gi|329126856|gb|AEB76801.1| trigger factor [Clostridium botulinum BKT015925]
Length = 432
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 83/440 (18%), Positives = 196/440 (44%), Gaps = 21/440 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +L++ + + ++ + + K NI GFR GK P++ I YG+
Sbjct: 1 MNTKIERVENNVVKLEITVEKEKFNEAIKKAYKKNAKKFNIPGFRKGKAPMNIITRFYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + I+ +E P+ + + + P I + E I D
Sbjct: 61 GVFYEDAINTCCEEAYPQAVEEHSLQPVDYPKIDVVE---------IGSGKDFVFTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTVDY 177
+ P++++ ++ ++ ++ V E+++++Q+ + + N + + + GD +D+
Sbjct: 112 VRPEVKLDNYKGVEAKRNTYTVKEEDVEKQLNAMLEKNARIITKEEGAAVQSGDIAVIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D E + +G+ + LVGLK G++KE+ FPE + +L G
Sbjct: 172 KGFIDGEAFEGGEGTDYSLEIGTGTFIDNFEDQLVGLKVGEEKEVNVKFPEQYGRDELNG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+ IKE+ ++++ A F++ ++ ++K+++ ++ + + +
Sbjct: 232 KQAMFEVKIKEIKVKELPALDDEFAKETSEFDTLQELKADVTKKLEEANKTREKNEYEEA 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
+++ +SNK D+PE ++E E + +++ + + Q +S + + +Y
Sbjct: 292 VIEAVSNKAEIDIPEVMIEKEIDMMIKDLEMRLGYQGLDLASYYQYTNSSESKVREYMKE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF--PGHEKKMLDHFQKYPNALA 410
A+++V T ++L I + IE TEEE+++ + ++ K++D
Sbjct: 352 TAEKKVKTELILEKIVKDEKIEATEEEIKARAKEMAQQYGGGQDADKLVDAIM--GAQKE 409
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
L I +K ID ++++ +
Sbjct: 410 VLSNQIVNEKAIDFLVENSK 429
>gi|254520132|ref|ZP_05132188.1| trigger factor protein [Clostridium sp. 7_2_43FAA]
gi|226913881|gb|EEH99082.1| trigger factor protein [Clostridium sp. 7_2_43FAA]
Length = 427
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 83/437 (18%), Positives = 185/437 (42%), Gaps = 17/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + E + ++ + + + ++ N+ GFR GKVP++ +K YG
Sbjct: 1 MEAKMEKIEKNVVKFEIKVEAEKFQEALKRAYNKNVKNFNVPGFRKGKVPMAIVKKYYGI 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + ++ I ++L + + P + + E +
Sbjct: 61 GVLIEDAVNFAIDASYSKVLEENNIIPVDYPKVDV---------ITAEEGKEFVYTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+ P++E+ + L+V + EV E ++ ++ E+ + N E KE E GD +D+
Sbjct: 112 VYPEVELGEYKGLKVEKPSYEVTEDAVNEKLKEMQQKNARIETKEDGEIATGDTAVIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D+V E K+ +GS + LVG K GD+ E+ FPE++ ++L K
Sbjct: 172 GFIDDVAFEGGEGKDYSLEIGSGTFIDTFEDQLVGAKAGDKVEVNVTFPENYGREELNNK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + +KE+ ++++ A F++ + ++ +K+++ + ++ + I
Sbjct: 232 QAKFEVLVKEIKIKELPEIDDEFAKEVSEFDTLAELKEDIVKKMEEENNNRAEREYEDAI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
+ + DVPE +VE E + +++ + + + + + +Y
Sbjct: 292 IKAVVENAKIDVPEVMVEKEIDTMVRNLEQRLQYQGLNLEQYFQFTGTDEAKMREYMKEN 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ +V T +VL + + NI+ TEEE++ + + E + A L
Sbjct: 352 AEVKVKTDLVLEAVEKAENIDATEEELKEKAKEVAKMYSAEEDDKMVDLLMN-GQRAALL 410
Query: 414 APIFEDKVIDHILKSVQ 430
A + K I ++++ +
Sbjct: 411 ADVKVSKTIKFLVENNK 427
>gi|42520205|ref|NP_966120.1| trigger factor, putative [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|67461815|sp|Q73I58|TIG_WOLPM RecName: Full=Trigger factor; Short=TF
gi|42409943|gb|AAS14054.1| trigger factor, putative [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 444
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 85/441 (19%), Positives = 189/441 (42%), Gaps = 25/441 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
E + LK E ++ + S+ + N R+++I A GFR GK+P + + Y L
Sbjct: 19 KELSIDKLKYEYEITVGSDYIKQKVNSRLQEIAENAKSPGFRAGKMPYDLVVANYKNEAL 78
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
I+ I +++ K + ++ + P + + G + +LS++ +P+
Sbjct: 79 EYVINNTIDYCSSDLMKKIEVKSHIYPKVDVISLP---DLGKENEEGNFVYKLSFESMPE 135
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIA---KNNVAFEVKETESEIGDKVTVDYTVS 180
+ + D + + + +++E++I + I N + + +++ GDK+ +D+
Sbjct: 136 VPVIDLDKINLKKIEAKIEEEDIKEFIDSIKTKFPNFASVDDASYQAKDGDKLIIDFEGR 195
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ N + + S KN +GS + + L G+K G+ K + FPE++ LAG++
Sbjct: 196 IRNKLFQGGSSKNFAVNLGSGTFINGFEDQLTGMKKGETKNFKLKFPENYQAISLAGQEA 255
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ + E+ ++++A +GF+ S + + I + +K+++ DY
Sbjct: 256 DFSVRVNEIQIAKDFENDDEIAKSIGFKDYSLLINHAKKMIGDQCTEMRNLLIKKELFDY 315
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+FD+P +V+ E + A++RV
Sbjct: 316 LDANYSFDLPTDIVKQEQQR-------------------MEGELGAQNDSRKEAEKRVKL 356
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
++ ++ I +T+ ++ S + Q ++L HF+ +R E K
Sbjct: 357 AMLFMKFSAEHKISLTQNDVLSVIVNQYVSKDVQFDRVLKHFESNKQFQELVRGQALEYK 416
Query: 421 VIDHILKSVQIVDRKVTFDQL 441
V D+I++ V ++ V+ +L
Sbjct: 417 VTDYIIEKVSKEEQIVSVKEL 437
>gi|313683646|ref|YP_004061384.1| trigger factor [Sulfuricurvum kujiense DSM 16994]
gi|313156506|gb|ADR35184.1| trigger factor [Sulfuricurvum kujiense DSM 16994]
Length = 433
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 85/444 (19%), Positives = 184/444 (41%), Gaps = 23/444 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ + +++ I + + + I +A + GFR GK P+S +K YG+
Sbjct: 1 MQITTNKIDSANAKINAAITRGTIDANIESIAKQIAREAKVAGFRKGKTPISAVKKQYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERA---AMRPSITINEGESDITSGLIEGTVDLKLRLS 117
++ + + +++++ L + A P+IT E + + + +
Sbjct: 61 RLVQDAEAQALRDLLTAGLKEMAIAADSLIGEPNITKFE----------KDDNGINVEVV 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTV 175
P I + + + +D+ + ++ E+A ++ GD +
Sbjct: 111 IATRPAITLGDYAAMVPEVSKPAIDDAAVTARIEELASAQAPLVNVDEDRALVSGDTALI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ VD E + +GS + ++G+K GD+K I+ FPE++ L
Sbjct: 171 DFEGFVDGEAFEGGKAEGFSLRLGSGQFIPGFEDQVIGMKKGDEKTIDVTFPENYGGAKL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
AGK + + + VV+N++LA ++ + A + +K+K+ E
Sbjct: 231 AGKPAQFKVKVNAIQMKEAVVINDELAKKMLPGYDDANVAMLKEKVKEQLESEAMSVKYN 290
Query: 296 Q-----ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++ + + D+PE +VE E + L K EMS A ++ +N + +
Sbjct: 291 DELKPALMETFVSAFAIDLPEFIVEQEMDMALNKKAREMSEAELEELRNDAEKVKAMRET 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A R V ++ + + N+ V E+E+ +Y + + + H+Q+ L
Sbjct: 351 FRDDACRAVKATFIVDALAKAENVVVNEQELMQTIYFEAMQMGQDPAAVYKHYQES-GYL 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVD 433
++ + ED+V+ +L +I +
Sbjct: 410 PAIQMAMIEDRVLSKLLND-KIKE 432
>gi|325474229|gb|EGC77417.1| trigger factor [Treponema denticola F0402]
Length = 451
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 83/451 (18%), Positives = 196/451 (43%), Gaps = 15/451 (3%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
E EL V I + + +S+ + + + I GFR GKVP+S +++ YG +I
Sbjct: 6 NITLKEKSHAELSVKIKKSDVQESYKKLLNKYSKELQIPGFRKGKVPVSVLETKYGDAIK 65
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+ ++I+E + EI DE ++ D + YD+ P+
Sbjct: 66 GDLAGDLIEESLKEIFESLDE----YERPLPYSYPELNEKPELKVDEDFSFTVHYDVFPK 121
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDYTVS 180
+EI + + V + +I +++ + + N + + ++ +
Sbjct: 122 VEIKKTEGFTIEVPEASVSDSDIKKELERLQERNALVTACKEGTSAAKDHIATIDYCELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + +++ F +GS + + ++G+K G+ KEI + FPED S KDLAGK
Sbjct: 182 DEGKTISGTERQDFVFTIGSGLNIYKIDDDIIGMKKGESKEITKTFPEDDSNKDLAGKTK 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++ + +++D A ++S ++ +K + E ++ K +
Sbjct: 242 KIKVTLTALKYKDLPALDDDFAQDINEKYKSLDELKADIKKKFEISVEEKIKSLQKNALT 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLA 354
+ + ++T D+PES+V E + + + ++ + + L+ + +
Sbjct: 302 EQMVKEHTIDLPESMVRAELESRWMMMANQFRTTPEELEKMFGKGPQSKATLLEGWREDS 361
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ + +++ T+ ++ NIEV+++E+++ + R ++ ++ P L
Sbjct: 362 EKTLKERVLIETLLKERNIEVSDDEIEAEYVRLSERMDIALDELKKYY-SNPREKEYLSE 420
Query: 415 PIFEDKVIDHILKSVQIVD-RKVTFDQLFDN 444
+ E+K+ + + I +K+TF++L +
Sbjct: 421 GLKEEKLFKALYEKSTIKKGKKLTFEELLKD 451
>gi|284929596|ref|YP_003422118.1| trigger factor [cyanobacterium UCYN-A]
gi|284810040|gb|ADB95737.1| trigger factor [cyanobacterium UCYN-A]
Length = 458
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 78/443 (17%), Positives = 182/443 (41%), Gaps = 21/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ ++ + L V IP+ ++ +I + ANI GFR GKVP S + G
Sbjct: 1 MKITQEKLPNSQIGLKVEIPAETAQKAYEIKINTLARTANIPGFRKGKVPRSILLQRLGN 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ I + T++E++++ + + + K +A ++ + D + L D
Sbjct: 61 RYIKAATLEELVQDSLKKAIDKESIKAIGNYTL---KDNLDKLIDEFQPGQPLTFSAQID 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI-------GDK 172
+ P +++ ++ +L + + D ++++ + E + E S +
Sbjct: 118 VPPSVQLGTYKELCIKAEEKNYDTEQVENWLKERQEKLATLVPVEDRSSQIGDVAIVDYQ 177
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
+ V + +E KN + + E +VG+K G+ KE+ FPED+
Sbjct: 178 GFLISEGKVADQPIEGVEGKNFRVDLEKGKFIEGMIEGIVGMKPGESKELPLIFPEDYPR 237
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQ 291
+DLA K V N + E+ + ++ND A F + + ++ ++ + ++ +
Sbjct: 238 EDLAKKSVNFNIKLTELKAKELPELDNDFADEVSEFGTITELKNSLEKQFIESAKSETQD 297
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED--LQY 349
+ I + ++ D+P++L++ E +L + +M + + D +
Sbjct: 298 NIHNAITEELTKNCIVDLPDTLIQEEITKLLTQTAMKMEEMGVDLSTIFNKDNLPKLREN 357
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
H A R+ ++L I I + E+E++S + + G + +
Sbjct: 358 AHPEAIVRLKKILILQEIASVETIAIEEKEIESKSNELKEKLKGQNIDLDKLYV------ 411
Query: 410 AELRAPIFEDKVIDHILKSVQIV 432
++ + +K ++ + + +I
Sbjct: 412 -TVKEQLMVEKTLNWLQEKSEIE 433
>gi|225630256|ref|YP_002727047.1| trigger factor, putative [Wolbachia sp. wRi]
gi|225592237|gb|ACN95256.1| trigger factor, putative [Wolbachia sp. wRi]
Length = 445
Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats.
Identities = 84/441 (19%), Positives = 189/441 (42%), Gaps = 25/441 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
E + LK E ++ + S+ + N R+++I A GFR GK+P + + Y L
Sbjct: 20 KELSIDKLKYEYEITVGSDYIKQKVNSRLQEIAENAKSPGFRAGKMPYDLVVANYKNEAL 79
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
I+ I +++ K + ++ + P + + G + +LS++ +P+
Sbjct: 80 EYVINNTIDYCSSDLMKKIEVKSHIYPKVDVISLP---DLGKENEEGNFVYKLSFESMPE 136
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIA---KNNVAFEVKETESEIGDKVTVDYTVS 180
+ + D + + + +++E++I + I N + + +++ GDK+ +D+
Sbjct: 137 VPMIDLDKINLKKIEAKIEEEDIKEFIDSIKTKFPNFASVDDASYQAKDGDKLIIDFEGR 196
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ N + + S KN +GS + + L G+K G+ K + FPE++ LAG++
Sbjct: 197 IRNKLFQGGSSKNFAVNLGSGTFINGFEDQLTGMKKGETKNFKLKFPENYQAISLAGQEA 256
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ + E+ ++++A +GF+ S + + I + +K+++ DY
Sbjct: 257 DFSVRVNEIQIAKDFENDDEIAKSIGFKDYSLLINHAKKMIGDQCTEMRNLLIKKELFDY 316
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ Y+FD+P +V+ E + A++RV
Sbjct: 317 LDANYSFDLPTDIVKQEQQR-------------------MEGELGAQNDSRKEAEKRVKL 357
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
++ ++ I +T+ ++ S + Q ++L HF+ +R E K
Sbjct: 358 AMLFMKFSAEHKISLTQNDVLSVIVNQYVSKDVQFDRVLKHFESNKQFQELVRGQALEYK 417
Query: 421 VIDHILKSVQIVDRKVTFDQL 441
V D+I++ V ++ ++ +L
Sbjct: 418 VTDYIIEKVSKEEQIISVKEL 438
>gi|53805233|ref|YP_113047.1| trigger factor [Methylococcus capsulatus str. Bath]
gi|53758994|gb|AAU93285.1| trigger factor [Methylococcus capsulatus str. Bath]
Length = 371
Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats.
Identities = 82/383 (21%), Positives = 167/383 (43%), Gaps = 16/383 (4%)
Query: 70 IIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSF 129
+I+ + ++ + R A P IT + I L +++LP E S
Sbjct: 1 MIQSSFHQAVNDENLRPAGMPRIT---------ATAIGEGEGLSYIADFEVLPDFEPSPL 51
Query: 130 DDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQ 189
++LQ + +CEV E +++ + + + E + + D+V + + + L D
Sbjct: 52 ENLQCPRFVCEVTEGDLEAMVQRLREQRRTRRAVERPAALNDEVVIHFEGKLGEESLTDG 111
Query: 190 SKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEV 249
+N + ++G L E L+G + G + E P D+ + LAGK V + + +
Sbjct: 112 RLENFRVVLGGRPLVPGFEEKLIGAEVGSRLAFELDVPADYGNEKLAGKTVAFDVEVVGI 171
Query: 250 FSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFD 308
+ V+ D G + A R +++ ++ + K +LD + +F
Sbjct: 172 NESVLPEVDADFVKTFGVDGDVEAFRADVRANMEREMRRALKARTKSAVLDALLAANSFT 231
Query: 309 VPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIG 368
+PE LV +E N +LQ N + E + Y LAKRRV G++L +
Sbjct: 232 LPEVLVADELNELLQPYHKAAEQGNPGVE-----LEALKERYTPLAKRRVALGLILSKLI 286
Query: 369 EKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS 428
++N + V + ++S + +Q + + +++++ + N L E+ + ED+V+D IL
Sbjct: 287 DENKLSVDRKRVRSTIEEQAQSY-ENPEQVVNWYYSDKNNLREIENLVLEDQVVDLILSK 345
Query: 429 VQIVDRKVTFDQLFDNSSESSPE 451
+ +++V F L + + +
Sbjct: 346 AAVTEQRVDFATLMAPAGATEQQ 368
>gi|226355421|ref|YP_002785161.1| Trigger factor, TF [Deinococcus deserti VCD115]
gi|259533566|sp|C1D0N3|TIG_DEIDV RecName: Full=Trigger factor; Short=TF
gi|226317411|gb|ACO45407.1| putative Trigger factor (TF) [Deinococcus deserti VCD115]
Length = 438
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 73/469 (15%), Positives = 175/469 (37%), Gaps = 45/469 (9%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSETI 67
EG K E V +P+ + ++ + + + GFRPGK P I+ GK + E
Sbjct: 8 EGNKVEFKVAVPAAEVNRAYEQVWAGLARDVRVPGFRPGKAPRKVIEGRVGKGYVEQEVR 67
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
D +++ P+ + ++ I + D + + P++ +
Sbjct: 68 DRLLQVHYPQAARELKLSLV----------DATIDPQDLNNGKDFTFNVRGETYPEVTLG 117
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ DL++ E+ + ++R ++++ + N FE + E D+VT++
Sbjct: 118 DWSDLKLEATSPEITDDVLNRTLSDLQERNATFESVDRAIEASDQVTIEEQGEDGGTYPV 177
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ L+G GD EI H D + + I
Sbjct: 178 YLDVAEAHV-----------RDALLGKNKGDTVEITVPA---HQHGDHEHAEHTVTVKIM 223
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
+V + +N++ A L FES +R ++++ ++ + + + +++ +
Sbjct: 224 DVKTKQLQELNDEFASSLNFESLDRLRADLRNELQRRAQQEGDNARREEFVAHLTERMQA 283
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID------EEDLQYYHMLAKRRVLTG 361
D+P++L+E ++Q+++ ++S K ++ +E + A+ RV
Sbjct: 284 DIPQALLERRREAMMQEIQDDLSRQGVKWSEYETFMKEQGKLDEFMADLSKNAETRVKRD 343
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ L + E ++V++ E + +++ PN + A I ++
Sbjct: 344 LALEKLAEDLKVQVSDAEFNQTMTMLAQANGLSPEQLSKQLG--PNGINSYYASIVRERA 401
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ L L +E+ ++ ++ + +E++
Sbjct: 402 LQQALAQ------------LSGPQAETVAADQGEQQAEGQEESAEKSEE 438
>gi|218440074|ref|YP_002378403.1| trigger factor [Cyanothece sp. PCC 7424]
gi|218172802|gb|ACK71535.1| trigger factor [Cyanothece sp. PCC 7424]
Length = 479
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 72/482 (14%), Positives = 181/482 (37%), Gaps = 35/482 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + L++ I + ++ ++++ I GFR GK+P + G
Sbjct: 1 MKVTQEKLPDSQIGLEIEISPEKSQQTYETVVQNLARTTQIPGFRKGKIPRQVLVQRLGS 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++EII+ + E + + + + + S D
Sbjct: 61 QRLKAAALEEIIQSSLQEAVKQESIEVLGNYQL---RSSFEELLEKYKPGESFSFSASVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV---- 175
+ P +++ + LQ+ + D +++D E + V E S V +
Sbjct: 118 VPPTVQLGDYQSLQIKAEETPYDPQKVDAWFDEQREKFVTLVPVEERSAQMGDVAIIDYQ 177
Query: 176 ----DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
T + + + + +G S E +VG+K + K+I FP D+
Sbjct: 178 AKKASETEGNELEPIPGVEGTDFRVELGEGRFISGFVEGIVGMKPDETKDITATFPSDYP 237
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAV------RLGFESESAMRGLCSQKIKQHS 285
++LAG++ ++KE+ +++D A FE+ + R +++++ +
Sbjct: 238 QEELAGQEAIFTVTLKELKEKELPELDDDFAEQLAENSEQKFETLAEWRDYLEKQVQEQA 297
Query: 286 EFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID-- 343
E + + I+ + N + DVPE+L+++E +L++ +M + + + +
Sbjct: 298 ENETKNSIHAAIIKELVNISSVDVPETLIQDEVTELLRQTAVQMQQMGVDIKTLFTPENV 357
Query: 344 EEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ 403
+ A R+ +VL + + +++ E ++ + + + G + +
Sbjct: 358 NRMRENARPEAIERLKQTLVLREVAKVESLQADTEAIEERYNKLVSQLEGQDIDL----- 412
Query: 404 KYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETF 463
+ I K +D + + + +L + + E+
Sbjct: 413 --ERLREVITEEILTQKTLDWLQEKATV--------ELVPKQTSDTEEETELDPGDETII 462
Query: 464 QS 465
++
Sbjct: 463 ET 464
>gi|170077891|ref|YP_001734529.1| trigger factor [Synechococcus sp. PCC 7002]
gi|238692793|sp|B1XL18|TIG_SYNP2 RecName: Full=Trigger factor; Short=TF
gi|169885560|gb|ACA99273.1| trigger factor [Synechococcus sp. PCC 7002]
Length = 454
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 70/446 (15%), Positives = 178/446 (39%), Gaps = 25/446 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+VI++ + L++ +P++ ++++ + + N+ GFR GKVP + G
Sbjct: 1 MKVIQEKLPASQVGLEIEVPADVTQKAYDDTVRKLARTVNLPGFRKGKVPKQILIQRLGP 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ I + ++++I + + +++ + A + + D + + + D
Sbjct: 61 NRIKASVLEDLIDDSLKAAIAQENIEALGNFQL---KSSFDDLISAYKPGEASSFKAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV------ 173
+ + ++S+ L + E D ++D + + + E + V
Sbjct: 118 VPATVTLNSYKGLSFKAEKSEYDPADLDEFLTQKQRELATLVPVEDRAAQMGDVAIADYE 177
Query: 174 --TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
V+ + I+ ++ + + VG+K + K+ FPED+
Sbjct: 178 GRYVNDAGEEEEDIIPGTQAEDFSLDLEEGKFIPGFVDGFVGMKPEETKKFTVTFPEDYG 237
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFL 288
+++AGK+V ++KE+ S ++++ A FE+ +A + ++K+++E
Sbjct: 238 NEEMAGKQVSFTVTLKELKSRELPELDDEFASEATNEEFETLAAWQESLEAQLKENAEIS 297
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED-- 346
+ V+R +L+ ++ + ++PE V E +L + E S + + D
Sbjct: 298 TKNSVRRYLLEQLAANNSTELPEVSVNEEITAVLTQQMMEFSRMGIDVNRIFTKDMIPKL 357
Query: 347 LQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYP 406
+ A++R+ ++L I + IE+ ++ L + +
Sbjct: 358 RETARPEAEQRLSNSLILTEIAKVEKIEIDTDKFNERLEEAKAELQEGFDE--------E 409
Query: 407 NALAELRAPIFEDKVIDHILKSVQIV 432
++ + D +D + + +I
Sbjct: 410 RLQEAIKEELTIDATLDWLEEQSEIE 435
>gi|325680695|ref|ZP_08160233.1| trigger factor [Ruminococcus albus 8]
gi|324107475|gb|EGC01753.1| trigger factor [Ruminococcus albus 8]
Length = 426
Score = 160 bits (405), Expect = 3e-37, Method: Composition-based stats.
Identities = 82/440 (18%), Positives = 182/440 (41%), Gaps = 22/440 (5%)
Query: 1 MQVIEKFSEGLK-RELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M + + G EL++ IP+ ++ + R ++ GFR GK P I+ YG
Sbjct: 1 MSLKATNNVGTNSYELEIEIPAKDFEEALQKAYLRARKNISMPGFRKGKAPRKLIEKEYG 60
Query: 60 KSI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + + ++ + +V + + +P + + I ++L+
Sbjct: 61 EEVFYEDAVNLLYAPVVNGAIDESGLDLVTQPEVEVV---------AISKEEGVQLKAKC 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDY 177
P++E+ + ++V + + V ++++ +++ E+ + NV + +E GD V +D+
Sbjct: 112 TTRPEVEVKDYKGIEVEKVVNAVTDEDVQKKLDELREKNVRIVTVDDRAAENGDTVKIDF 171
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
D+V E ++ +GS + +VG G+ +I FPE++ +KDLAG
Sbjct: 172 EGFKDDVAFEGGKAEDFDLELGSGQFIPGFEDQIVGHSAGESFDINVTFPEEYQVKDLAG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K + +++D+ F++ + K+++ +E KV+
Sbjct: 232 APAVFKINLKSISKKELPELDDDMVKDSTDFDTVDEYKADIKAKLEEAAEKAADAKVEGD 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHM 352
I D + T ++PE + +N N ++ ++ M+ Q + + Y
Sbjct: 292 IFDKVIENMTAEIPEVMYDNRVNEMVAELEQRMAPQGISLDMYMQFTGQTIDTIKKGYAE 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+++V + L I E +EVT+EE++ + ++ L
Sbjct: 352 QAEKQVKLRLALEKIAELEKVEVTDEELEEEFKNLSETYKMEVDQIKALIPA-----ENL 406
Query: 413 RAPIFEDKVIDHILKSVQIV 432
+ + K +D I +S I
Sbjct: 407 KMDLSVGKAVDIIKESAVIK 426
>gi|157737935|ref|YP_001490619.1| trigger factor [Arcobacter butzleri RM4018]
gi|315637682|ref|ZP_07892887.1| trigger factor [Arcobacter butzleri JV22]
gi|166987585|sp|A8EVH6|TIG_ARCB4 RecName: Full=Trigger factor; Short=TF
gi|157699789|gb|ABV67949.1| trigger factor [Arcobacter butzleri RM4018]
gi|315478029|gb|EFU68757.1| trigger factor [Arcobacter butzleri JV22]
Length = 433
Score = 160 bits (404), Expect = 4e-37, Method: Composition-based stats.
Identities = 87/439 (19%), Positives = 186/439 (42%), Gaps = 21/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + + + + + ++ + + N++GFR GKVP++ +K Y
Sbjct: 1 MEFNANRVDEANAVITATLTKDSIENNLEKVAKQAAKTMNVQGFRKGKVPVAVVKQRYAD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + + I++I+ + L D + PS+T + D+++ LS
Sbjct: 61 KLREDAEADGIRKILADGLKLLDIKNSDLIGEPSVT---------KFDKKDNGDIEVELS 111
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTV 175
P I++ + L E+D K+ID ++ EIA+++ E + + GD +
Sbjct: 112 VACKPNIDLGDYKSLVPAVKAIEIDIKKIDDRLTEIAQSSAPLEKIARKRAVKDGDFAVI 171
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ VD V + + +GS E ++G+K +QK+I FPE + KDL
Sbjct: 172 DFEGFVDGVAFDGGKAEKYPLQIGSGSFIPGFEEQVIGMKYEEQKDITVKFPESYQAKDL 231
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHS-----EFLVR 290
AGK+ ++ E+ +N++ A ++ + ++K+ R
Sbjct: 232 AGKEAVFKVTLHEIQERAKPELNDEFAQKMLPGQKDVTIDTLRDRVKEQMLAEDKAKYYR 291
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
++K L+ + K F +P S++E E N L M+ + + + E+
Sbjct: 292 DELKPVFLETLVEKINFALPTSVIEQEINYALNNKIRTMTEEEINELKENANKVEDIRNE 351
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A V ++ + + N++V+++E+ LY + + + + ++ +Q+ L
Sbjct: 352 LKEDAVNSVKATFIIDALAKAENVQVSDQEVTQVLYFEAMQMGQNPQDVIKQYQQ-AGYL 410
Query: 410 AELRAPIFEDKVIDHILKS 428
++ + E+KVI +L
Sbjct: 411 PAIKMSMIEEKVISKLLDE 429
>gi|257126079|ref|YP_003164193.1| trigger factor [Leptotrichia buccalis C-1013-b]
gi|257050018|gb|ACV39202.1| trigger factor [Leptotrichia buccalis C-1013-b]
Length = 428
Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats.
Identities = 83/437 (18%), Positives = 181/437 (41%), Gaps = 20/437 (4%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K E+ + L + A + GFRPG VP I++ + K I
Sbjct: 3 VKKLNESTYEVSAVREGEELKHLKEHVLVHF-KDAKVDGFRPGHVPAKVIENKFKKEIEG 61
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
E ++ II + + +++ + R + E D + + +LP
Sbjct: 62 EILNHIISDEYRKAVAENELRPIADIKLEKYELNDDKVEVVF----------TIPVLPSF 111
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYTVSVD 182
E+ + ++V ++ E+ +++++ ++ ++ +N + + E++ D V +++ +D
Sbjct: 112 ELGQYKGVEVEKENVEITDEKVNEEIEKLRENAAKLKEVEENEEAKNDDVVNINFEGFID 171
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ + +GS + +VG K GD+ ++ FPE++ ++L GK
Sbjct: 172 GEAFDGGKAEGYDLTLGSHSFIDTFEDQIVGHKKGDEFDVNVTFPEEYHAENLKGKPALF 231
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
+ + +N+DLA LGF+S M + I + E K ++++ +
Sbjct: 232 KVKVNSIKRKEEAELNDDLAKELGFDSVEDMTNKTRENITKREEARAENDFKNKVVEAVV 291
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKRRV 358
+ TFDVPE+LV+ E + + + ++ K + + E + A+R V
Sbjct: 292 DAITFDVPEALVQREIDYQINRFAQQLQMQGMKLEQYFQMTGQTLETMRESAKENAERAV 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LAELRAP 415
T +VL I + I+ T++E+ + + ++ +L +K N + E
Sbjct: 352 KTELVLAEIAKAEEIKTTDDEITKEIETLAAMYGIDKETLLSDVRKNGNYERFIDETNYR 411
Query: 416 IFEDKVIDHILKSVQIV 432
+ K ID ++ ++
Sbjct: 412 LVNQKTIDLLVNEAKVK 428
>gi|41018177|sp|Q7URG5|TIG_RHOBA RecName: Full=Trigger factor; Short=TF
Length = 480
Score = 160 bits (403), Expect = 6e-37, Method: Composition-based stats.
Identities = 71/436 (16%), Positives = 170/436 (38%), Gaps = 14/436 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V RE+ V IP + + +++ +A + GFR G+ P ++ +
Sbjct: 1 MEVT--KPHACLREVVVTIPRGEVDRYMKDAYDELVPEAQVPGFRAGRAPRKLVEKQFKD 58
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++ + + ++ + A P D S + + K + S ++
Sbjct: 59 RIEDRVKGSLLMDSLAKVTEDAEFSAIGEPDF-------DYESIELPEKGEFKYQFSIEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E + L++ + + + E+++D + + + E + +EIGD++ +
Sbjct: 112 RPEFETPDWKKLELKKPVETISEEDVDAALQRVLSRYASLEASDAPAEIGDRLLITGKFV 171
Query: 181 VDNVILEDQSKKNVQFIVG---SADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ + ++ V S + E++ K GD + E H+ +++ G
Sbjct: 172 DGEKTISEMDEERVTLANRLSLSDAVCENFGELMKDCKEGDVVTGKVKLGEGHANEEMQG 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K+V F++ EV + ++ FE+E +R +++ + F Q ++
Sbjct: 232 KEVDATFTVVEVLKEQLPELTSEFLDELGEFETEDELREFVRASLERQANFRTEQAMRGS 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I++ + F++P +LV + L + E + + Q +
Sbjct: 292 IIEKLLASADFELPPTLVRRQMKRELDRKVLEFRRSGFDDDMIRRFVNASKQNMQQGTES 351
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ +L I ++ I+ +E ++ + + +++ +K + LR I
Sbjct: 352 SLREHFILEQIADEEKIDAEPQEYETEIQLIAEQSDSSPRRVRARLEKT-GQMDALRNQI 410
Query: 417 FEDKVIDHILKSVQIV 432
E KVI+ I ++ +
Sbjct: 411 VERKVIELISEAATVT 426
>gi|296273947|ref|YP_003656578.1| trigger factor [Arcobacter nitrofigilis DSM 7299]
gi|296098121|gb|ADG94071.1| trigger factor [Arcobacter nitrofigilis DSM 7299]
Length = 433
Score = 160 bits (403), Expect = 6e-37, Method: Composition-based stats.
Identities = 84/439 (19%), Positives = 187/439 (42%), Gaps = 21/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K + E+ + + ++ ++ NI+GFR GKVP++ +K+ YG+
Sbjct: 1 MEFNAKRVDEANAEITATMSKATIDAKMDKIAKEAAKTMNIQGFRKGKVPVNVVKARYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDE---RAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + +E++++++ E L+K + P ++ + D+ + +
Sbjct: 61 KLSEDAANEVLRDLLQEGLAKLEIANDELIGEPGVS---------KFDKKDNGDIDVEVK 111
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTV 175
P+ ++ + L +V +K++ ++ +AK + E + + + D +
Sbjct: 112 VSSKPKFDLGDYKSLIPAVKEKKVAKKDLTERLENLAKGSAPLEKIKRKRMVKEGDFAVI 171
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ VD V E + VGS E ++G+K +QK+I FPE + K+L
Sbjct: 172 DFEGFVDGVAFEGGKAEKYALEVGSNSFIPGFEEQVLGMKYDEQKDIVVTFPETYQAKNL 231
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSE-----FLVR 290
AGK+ ++ E+ + ++++ A ++ E A KI++ + R
Sbjct: 232 AGKEATFKVTLHEIQEKVAAELDDEFAKKMLPNEEDATIDTLKAKIEEQMKTELMFSYYR 291
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQY 349
+++K + LD + K F +P S+VE E N L M+ + Q E
Sbjct: 292 EELKPEYLDKLVEKINFALPTSVVEQEVNYALNNKVRTMTEEEIKELQENAEKVEAIRDE 351
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A+ V ++ + +EV ++E+ +Y + + + + +L + + +
Sbjct: 352 LKADAETSVKATFIVDALAAAEGVEVNDQEVTQVIYYEAMQNGQNPQDVLKQY-QDAGYM 410
Query: 410 AELRAPIFEDKVIDHILKS 428
++ + EDKV++ +
Sbjct: 411 PAIKMSMIEDKVLNKLFDE 429
>gi|72383091|ref|YP_292446.1| trigger factor [Prochlorococcus marinus str. NATL2A]
gi|119370919|sp|Q46ID5|TIG_PROMT RecName: Full=Trigger factor; Short=TF
gi|72002941|gb|AAZ58743.1| trigger factor [Prochlorococcus marinus str. NATL2A]
Length = 472
Score = 160 bits (403), Expect = 6e-37, Method: Composition-based stats.
Identities = 73/441 (16%), Positives = 185/441 (41%), Gaps = 14/441 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-K 60
V + ++V +P+NR +S++E + + +I GFR GKVP + + G K
Sbjct: 7 NVKTSAKPNSRIAVEVEVPANRCKNSYDEALSKLSRSISIPGFRKGKVPKTVVIQQLGVK 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++ +++++ E L + P + + L L+L DI
Sbjct: 67 RIQASALESLLQKVWTETLDQEGIEPLCEPELED---GFETILENFNPEKTLILKLETDI 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV---TVDY 177
P + L + D K++D + + + + +
Sbjct: 124 TPIPTLKKSSGLTAEVENLIFDPKKVDELIEQSRAQLATKVPVSDRAAQKGDIALVSFKG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ S D +E S +++ + + E ++G+ D+K ++ FP+D+ ++ G
Sbjct: 184 SFSDDGSEIEGGSADSIEIELEQGRMIPGFIEGVIGMNINDEKTLKCEFPKDYHQEEAKG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K N S++++ +N++ A + E+ S +R +++K+ ++ + +
Sbjct: 244 RKAEFNVSLEDLKIKELPELNDEFAKQASDKENMSDLRADLEKRLKEDNDRKQAKTRQDS 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
+LD + + D+P+SL++ E I+++ + +++ + + + ++ A
Sbjct: 304 LLDVLVKELEVDLPKSLIDQEVRTIVEQTAQNFAQQGIDVKSMFTPELVKSLMESSKGEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++++ L + + IEV+++E+ S L Q +K +D +
Sbjct: 364 EKKLRQKFALQALAKSEKIEVSDKEINSKLEQVEADIKLSNEKNIDA----ERLKEAITD 419
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
+ ++K+ + ++ +V++
Sbjct: 420 DLLQEKLFAWLEENNTVVEKT 440
>gi|269792565|ref|YP_003317469.1| trigger factor [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100200|gb|ACZ19187.1| trigger factor [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 447
Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats.
Identities = 64/446 (14%), Positives = 192/446 (43%), Gaps = 23/446 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ E + ++ + + + + + ++ +K NIKGFR G VP ++ GK
Sbjct: 1 MKSEIVSQEKNTLVIKAVVDAETFSKTVSNAVRELSNKVNIKGFRKGHVPRKTLEMFLGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+I E +++++ +++ +I+ + D P + + G ++ L++ ++
Sbjct: 61 GAIYDEAVEKLLPKLMGDIIQEYDLTLMEDPKVKL---------GQVQDGSALEVEFTFS 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV-----T 174
+ P+++ + + + +V ++ ++ ++ I + N E + I +
Sbjct: 112 LRPEVKFPELSSVTAKRPVFKVTDEMVEEEIRRILEANATHEPVTEDRPITSEDVVEVLY 171
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+ + +++ + + + + + + + ++ + LVG GD ++ ++
Sbjct: 172 SSWILDGEDLGEKLEDSQVSKIELFNPSIRTDIVDALVGKSVGDDVSVDIQVDPAYNNPK 231
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRL---GFESESAMRGLCSQKIKQHSEFLVRQ 291
+AGK VR S++ + + + + +A ++ ++ +R + +++ E ++
Sbjct: 232 VAGKMVRYAMSVRGILKVVVPELTDQMAEKVSQGECKTAEELRSAIREAMEKSFERRAQE 291
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-----NQKSQNVDSIDEED 346
V+ L+ + D+PE +++ E + +L + ++ +Q + +++ +
Sbjct: 292 AVRESALEELCAACQVDIPEDMLQRERDHMLVHEKQRVTQQLKKEWDQYLKEMETDEAAF 351
Query: 347 LQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYP 406
A+ + +VL T+ ++ I+V+ E++ + + E K
Sbjct: 352 AAKMEERAREIIKRELVLWTLADREGIDVSPEDLDGEIRKMSMSVGVDESKFRSFLASNR 411
Query: 407 NALAELRAPIFEDKVIDHILKSVQIV 432
L E+ + I + K +D ++ +V++
Sbjct: 412 QRLDEMVSSIRKRKTMDWLVSAVKVE 437
>gi|58616923|ref|YP_196122.1| trigger factor [Ehrlichia ruminantium str. Gardel]
gi|67461603|sp|Q5FFG8|TIG_EHRRG RecName: Full=Trigger factor; Short=TF
gi|58416535|emb|CAI27648.1| Trigger factor [Ehrlichia ruminantium str. Gardel]
Length = 446
Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats.
Identities = 95/447 (21%), Positives = 196/447 (43%), Gaps = 22/447 (4%)
Query: 3 VIEKFSE-GLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
V E ++ LKRE + I + + ++ +I I GFR GK + IK Y +
Sbjct: 7 VKEILNDNKLKREYEFTIDNKYFFSQLDAKLLEIAKNVKIPGFRAGKASIDLIKKEYLNN 66
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVD----LKLRLS 117
++ I +I+++ E + + ++++ L +LS
Sbjct: 67 AVNTLIRKIVEDTSSEFIKNGKFGEIISSNVSVISCPDYGMGVSSTSGDPAGDNLVYKLS 126
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE---VKETESEIGDKVT 174
++++P+ + + DD+ ++ ++ + +I + + K F E ++GDKV
Sbjct: 127 FEVMPEAPLIALDDIVLSDIEADIQDSDISEFIENLKKQCSEFVEVSDSEYRVKMGDKVV 186
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
VDY + +L+ K++ IVG + + + L+G+K G+ K FP+++ +
Sbjct: 187 VDYQNRIKGKMLKGGDTKDLAVIVGRGLVLKDFEDQLIGMKIGESKSFPIQFPDNYGVAY 246
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
L GK ++ ++K +F + N ++ F+ E A++ KIKQ + + VK
Sbjct: 247 LVGKSADVSVTVKNIFMMKAIEENENVIKYYQFKDEQALKDFARNKIKQQFDKISFAIVK 306
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+++ DY+ Y+ DVPE +V E + I +Q + A
Sbjct: 307 KELFDYLDKTYSIDVPECVVTKEIDKI--------------NQEIQDSAGTVQVDVKAEA 352
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+RV GI+L + +NI + ++++ S + + +L Q + +
Sbjct: 353 MKRVKLGILLVKMSRHHNISINKDDVFSFINTYYSDYGISLNDVLRMLQSNKDFANYISG 412
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ EDKVI++I++ V+ + +T +L
Sbjct: 413 KVLEDKVINYIIRLVKKDKKVMTTQEL 439
>gi|294783781|ref|ZP_06749105.1| trigger factor [Fusobacterium sp. 1_1_41FAA]
gi|294480659|gb|EFG28436.1| trigger factor [Fusobacterium sp. 1_1_41FAA]
Length = 415
Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats.
Identities = 79/426 (18%), Positives = 175/426 (41%), Gaps = 21/426 (4%)
Query: 15 LDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEI 74
+ + + + ++ ++ ++ + A + GFR G P + + Y I S+ ++ I
Sbjct: 1 MKLHLDAAEVSPLVDKVLKHVGEHAEVAGFRKGHAPKEALMANYKDHIESDVANDAINAH 60
Query: 75 VPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQV 134
PEI+ K + I +L L D+ P+ + ++ L+
Sbjct: 61 FPEIVEKEKLEPVSY-----------VRLKEIALKDELDLTFDIDVYPEFTLGNYKGLEA 109
Query: 135 TQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ E+ + ++ ++ + +N+ E ++++ D V + + +D V
Sbjct: 110 EKKTFEMTDDLLNTELEMMQRNHSKLVEVEDASYKAQLEDTVDLAFEGFMDGVPFPGGKA 169
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
++ +GS E LVG G + EI FPE++ +LAGK + I +
Sbjct: 170 ESHLLKLGSKSFIDNFEEQLVGYTKGQEGEITVKFPEEYHAPELAGKPAQFKVKINAIKQ 229
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPE 311
+N++ A LG+ES ++ ++ + + + +LD + T DVP
Sbjct: 230 LREPELNDEFAKELGYESLEDLKNKTKEETIKRENDRIENEYVGALLDKLMETTTIDVPV 289
Query: 312 SLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKRRVLTGIVLGTI 367
S+V+ E L+++ +++S K + + + A+++V ++L I
Sbjct: 290 SMVQAEIQNRLKELEYQLSMQGFKMDDYLKMMGGNIDTFAAQLAPAAEKKVKVDLILDKI 349
Query: 368 GEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LAELRAPIFEDKVIDH 424
+N E +EEE++ + + + + +K N A ++ I K ID
Sbjct: 350 ARENKFEASEEELKERMEEVAKMYGMDVPTLEGELKKNNNLDNFKASVKYDIVMKKAIDE 409
Query: 425 ILKSVQ 430
++K+ +
Sbjct: 410 VVKNAK 415
>gi|317487859|ref|ZP_07946451.1| trigger factor [Eggerthella sp. 1_3_56FAA]
gi|316912985|gb|EFV34502.1| trigger factor [Eggerthella sp. 1_3_56FAA]
Length = 495
Score = 159 bits (401), Expect = 9e-37, Method: Composition-based stats.
Identities = 76/452 (16%), Positives = 170/452 (37%), Gaps = 25/452 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+ + E + ++ V + + + + +D +K N GFR GK P I + G
Sbjct: 1 METKVEALEDNRTKVTVTVDAADIDARIKKTYKDFANKYNFPGFRKGKAPRPIIDNALGA 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + D+++ P + D +P + L+E +
Sbjct: 61 EAVRATVTDDVVNGTYPLAIDDCDLYPIAKPEFDETD--------LVEAGKPYTFSFTVT 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+IEISS++ +++ + EID Q+ + ++ +FE +++ + +D +
Sbjct: 113 VKPEIEISSYEPVEIELPAEGTTDAEIDEQIDALREHYYSFEDASAATKVKEDSYIDLAM 172
Query: 180 S---VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ + +N + +G+ +E E LVGLK G P D I A
Sbjct: 173 KATDDKGEEIPSLTTENRPYGLGANLFPAEFDEQLVGLKKGQTATFTLDMPADPPIMLSA 232
Query: 237 ----GKKVRLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQ 291
+K+ +K V + VN++ A FES +R ++ + ++ +
Sbjct: 233 LAGKTEKINFEVEVKVVKKKIVPEVNDEWAKEQMGFESVEDLRARIAESVTSQKADMMPR 292
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDL 347
+ L ++ + DVPE+++E+ ++Q ++ S ++
Sbjct: 293 LKENACLYALAERVEGDVPEAMLEDAEASLIQDFFQQLQSQGMTFDVYLAQQGITPDQFK 352
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A+ + L +E T EE+ + + L+ +
Sbjct: 353 EDVKKQAEDMSKQDLALDAWARHFGMEATAEEVTEEFVK----SGVEDPAALEAEWRSNG 408
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFD 439
L +R + K + I+ + + ++
Sbjct: 409 QLHMVRQGVIRTKAVKDIMDKAVVTELDLSKK 440
>gi|42527178|ref|NP_972276.1| trigger factor [Treponema denticola ATCC 35405]
gi|67461818|sp|Q73M39|TIG_TREDE RecName: Full=Trigger factor; Short=TF
gi|41817602|gb|AAS12187.1| trigger factor [Treponema denticola ATCC 35405]
Length = 451
Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats.
Identities = 87/451 (19%), Positives = 196/451 (43%), Gaps = 15/451 (3%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
E EL V I + + +S+ + + + I GFR GKVP+S +++ YG +I
Sbjct: 6 NVTLKEKSHAELSVKIKKSDVQESYKKLLNKYSKELQIPGFRKGKVPVSVLETKYGDAIK 65
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+ ++I+E + EI DE ++ D + YD+ P+
Sbjct: 66 GDLAGDLIEESLKEIFESLDE----YERPLPYSYPELNEKPELKVEEDFSFTVHYDVFPK 121
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDYTVS 180
+EI + + V EK+I +++ + + N + + + +
Sbjct: 122 VEIKKTEGFTIEVPEASVSEKDIKKELERLQERNALVTACKEGTSAEKDHIATIDYCELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + +K+ F +GS + + +VG+K G+ KEI + FPED S KDLAGK
Sbjct: 182 DEGKTISGTERKDFVFTIGSGLNIYKIDDDIVGMKKGESKEITKTFPEDDSNKDLAGKTK 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++ + +++D A +++ ++ +K + E ++ K +
Sbjct: 242 KIKVTLTALKYKDLPALDDDFAQDINEKYKNLDELKADIKKKFEISVEEKIKSLQKNALT 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLA 354
+ + ++T D+PES+V E + + + ++ + + L+ + +
Sbjct: 302 EQMVKEHTIDLPESMVRAELESRWMMMANQFRTTPEELEKMFGKGPQSKAALLEGWREDS 361
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ + +++ T+ ++ NIEV+++E+++ + R ++ ++ P L
Sbjct: 362 EKTLKERVLIETLLKEKNIEVSDDEIEAEYVRLSERMDIALDELKKYY-SNPREKEYLSE 420
Query: 415 PIFEDKVIDHILKSVQIVD-RKVTFDQLFDN 444
+ E+K+ + + I +K+TFD+L +
Sbjct: 421 GLKEEKLFKALYEKSTIKKGKKLTFDELLKD 451
>gi|124026829|ref|YP_001015944.1| trigger factor [Prochlorococcus marinus str. NATL1A]
gi|166229915|sp|A2C5C0|TIG_PROM1 RecName: Full=Trigger factor; Short=TF
gi|123961897|gb|ABM76680.1| FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
[Prochlorococcus marinus str. NATL1A]
Length = 472
Score = 159 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/441 (16%), Positives = 185/441 (41%), Gaps = 14/441 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-K 60
V + ++V +P+NR +S++E + + +I GFR GKVP + + G K
Sbjct: 7 NVKTSSKPNSRIAVEVEVPANRCKNSYDEALSKLSRSISIPGFRKGKVPKTVVIQQLGVK 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++ +++++ E L + P + + L L+L DI
Sbjct: 67 RIQASALESLLQKVWTETLDQEGIEPLCEPELED---GFETILENFNPEKTLILKLETDI 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV---TVDY 177
P + L + D K++D + + + + +
Sbjct: 124 TPIPTLKKSSGLTAEVENLIFDPKKVDELIEQSRAQLATKVPVTDRAAQKGDIALVSFKG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ S D +E S +++ + + E ++G+ D+K ++ FP+D+ ++ G
Sbjct: 184 SFSDDGSEIEGGSADSIEIELEQGRMIPGFIEGVIGMNINDEKILKCEFPKDYHQEEAKG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K N S++++ +N++ A + E+ S +R +++K+ ++ + +
Sbjct: 244 RKAEFNVSLEDLKIKELPELNDEFAKQASDKENMSDLRADLEKRLKEDNDRKQAKTRQDS 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
+LD + + D+P+SL++ E I+++ + +++ + + + ++ A
Sbjct: 304 LLDVLVKELEVDIPKSLIDQEVRIIVEQTAQNFAQQGIDVKSMFTPELVKSLMESSKGEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++++ L + + IEV+++E+ S L Q +K +D +
Sbjct: 364 EKKLRQKFALKALAKSEKIEVSDKEINSKLEQVEADIKLSNEKNIDA----KRLKEAITD 419
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
+ ++K+ + ++ +V++
Sbjct: 420 DLLQEKLFAWLEENNTVVEKP 440
>gi|269120921|ref|YP_003309098.1| trigger factor [Sebaldella termitidis ATCC 33386]
gi|268614799|gb|ACZ09167.1| trigger factor [Sebaldella termitidis ATCC 33386]
Length = 430
Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats.
Identities = 77/435 (17%), Positives = 173/435 (39%), Gaps = 19/435 (4%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K EG K E+ + + + E I+ ++ + GFR G VP S I+ Y +I
Sbjct: 4 IKKLEGSKYEVKITREKEEIGEMRKEAIKTLKKNVKMDGFRQGHVPDSVIEKNYEGNIKE 63
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
E +++I+ P IL K + I + D L+L ++P+I
Sbjct: 64 EIANKVIEAEYPGILEKEGIKPIDYLKIKDFNVDDD----------KLELIGEIQVMPEI 113
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE--IGDKVTVDYTVSVD 182
++ + ++ + E+ ++ +++++ + + N + E D V +D+ VD
Sbjct: 114 KLGEYKGIEAEKTAPEITDEILEKELERLRETNGKLKEIEDAEPAAFDDVVNIDFEGFVD 173
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ +GS + + G K G+ E+ FPE++ DLAGK
Sbjct: 174 GEAFAGGKAEGFDLKLGSKSFIDNFEDQITGHKKGEDIEVNVTFPEEYHSADLAGKPAMF 233
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
+ + +N++ A FE+ ++ ++++ + + + ++L+ I
Sbjct: 234 KVKVNSIKRLEKPELNDEFAKDQNFENVDELKAKTKERLENSEKAKADNEFQSKVLEQIV 293
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKS----QNVDSIDEEDLQYYHMLAKRRV 358
D+PE L+E E + L++ ++ + E A + V
Sbjct: 294 ANAELDIPEVLIEREIDQRLRQFDSQLRMQGMDLGKYVEMTGQSIESMRAPLKEDAAKAV 353
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKML---DHFQKYPNALAELRAP 415
+V+ I +K +I +E++ + + + + +++ Y N + ++
Sbjct: 354 RADLVISEISKKESIAAEADEVEKKIEEVAAMYGMEKAQLVNEAKRAGNYNNFVNSIKYD 413
Query: 416 IFEDKVIDHILKSVQ 430
+ K I+ ++K +
Sbjct: 414 LIARKTIEFLMKEAK 428
>gi|34558483|ref|NP_908298.1| trigger factor [Wolinella succinogenes DSM 1740]
gi|41018161|sp|Q7M7M4|TIG_WOLSU RecName: Full=Trigger factor; Short=TF
gi|34481777|emb|CAE11198.1| PUTATIVE TRIGGER FACTOR PROTEIN [Wolinella succinogenes]
Length = 432
Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats.
Identities = 86/437 (19%), Positives = 175/437 (40%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + ++ +D + GFR GKVP IK+ YG+
Sbjct: 1 MNLQTQKINSANATAKGTLEKALLEEKLDKLSKDAAKNLKVDGFRKGKVPAGVIKARYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERA---AMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + E ++E++ L P IT + +D+++++
Sbjct: 61 KLQEDAEREALQELLDAALKDLGAEPSQLIGDPRIT--------EYNKHDNGIDVEVKIG 112
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
++ S +E AK +A + E GD +D+
Sbjct: 113 LAPEITLQESLTYVPGFELPSVSEEEINTRLMELAKAKAPLAPAPEGKALENGDFAKIDF 172
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ E ++ +GS + L+G+K G++++I+ FPE++ + LAG
Sbjct: 173 EGFLGEEAFEGGKAEDYMLQIGSKSFIPGFEDQLIGMKAGEKRDIQVKFPENYGSEKLAG 232
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSE-----FLVRQK 292
++ ++KE+ P +++ A + E A L +KIK+ L +
Sbjct: 233 QEATFKIALKEIQVKAPQEPSDEFAKSVLPEEPEANLNLLKEKIKEQIATEKKVELYNSE 292
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQYYH 351
+K +++D + FD+PE +VE E + + + +S + +N + + +
Sbjct: 293 LKTKLVDNLVEALAFDLPELVVEQEIDLVFRNTLSSLSKEEIEALRNDQEAVKAKREEHR 352
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A R V ++ + +K I V + E+ +Y + K ML+++ K N L
Sbjct: 353 ESATRSVKVTFIVDALAKKEGIAVQDNELIQTIYYESMAMGQDPKAMLEYY-KNNNLLPA 411
Query: 412 LRAPIFEDKVIDHILKS 428
+R + EDK++ H+L
Sbjct: 412 VRMAMLEDKLLTHLLDQ 428
>gi|81428672|ref|YP_395672.1| trigger factor [Lactobacillus sakei subsp. sakei 23K]
gi|119370905|sp|Q38WR8|TIG_LACSS RecName: Full=Trigger factor; Short=TF
gi|78610314|emb|CAI55363.1| Trigger factor [Lactobacillus sakei subsp. sakei 23K]
Length = 431
Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats.
Identities = 83/445 (18%), Positives = 179/445 (40%), Gaps = 24/445 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EL I +++++ + + +R N GFR GK+P +YG+
Sbjct: 1 MSAKWEKKGANDGELTFEIDLDKISEGLDVAFKRVRKNINTPGFRKGKMPRQIFNKMYGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ ++ E +++ +P I + + E L
Sbjct: 61 EALYEDALNAVLPEAYEAAVAEAGIDPVDQPQINVEKM---------EKGEAWVLTAQVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P++++ + L+V + + K++++++ + ++ +E GD V +DY
Sbjct: 112 VKPEVKLGDYKGLEVPKQSRRITIKDVEQELETRRERQAELVLKEDAAAENGDTVVIDYA 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
SVD V + N +GS + LVG K + ++ FP+D+ ++LAGK
Sbjct: 172 GSVDGVPFDGGQADNYSLELGSNSFIPGFEDQLVGHKAEEDVDVTVTFPKDYQAEELAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ I EV ++++ A +S ++ +++KQ ++
Sbjct: 232 EAIFKVKIHEVKGKELPELDDEFAKDIDEDVDSLDELKEKIREELKQQKNDAADAAIQDT 291
Query: 297 ILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYH 351
+ + T ++P+++++ E N LQ+ M + +++ + +
Sbjct: 292 AVAKATENATIPELPQAMIDEEINSQLQQYLGNMQQQGINPEMYYQITGTTEDDLKKQFA 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +RV T +VL + E IE T+EE+ + L ++ E +
Sbjct: 352 GDADKRVKTSLVLEAVVEAEKIEATDEEVAAELKSLAEQYNMEESAVRSVLSDD-----M 406
Query: 412 LRAPIFEDKVIDHILKSV-QIVDRK 435
L+ I K I+ I S ++ D K
Sbjct: 407 LKHDIGVKKAIEVIADSAVEVKDAK 431
>gi|300866443|ref|ZP_07111135.1| Trigger factor [Oscillatoria sp. PCC 6506]
gi|300335547|emb|CBN56295.1| Trigger factor [Oscillatoria sp. PCC 6506]
Length = 475
Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats.
Identities = 75/483 (15%), Positives = 188/483 (38%), Gaps = 26/483 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + L++ I + + + ++ NI GFR GKVP + G+
Sbjct: 1 MKVTQEKLPASQIGLEIEITPEKSKQVYEQVVQQFSRSLNIPGFRRGKVPRHILLQRLGQ 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++++I E + + + + + A + E + E L + D
Sbjct: 61 TRLKATALEDLINESLQKAIEQENIEAIGNFEL---RSEFEQLLNQFEPGQPLTFLAAVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYT 178
+ P+ ++ + LQ+ + D ++++R + + E +++GD +D+
Sbjct: 118 VEPEAKLGEYTGLQLKAEDVNYDAEQVNRVLEQYRAEKATLIPAEGRAAQLGDMALLDFQ 177
Query: 179 VSV-------DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
+ + ++ Q + ++G+ G+ KEI FP ++
Sbjct: 178 GRFAIAPEGEEPQEIPGGKAEDFQVELQENQFIPGFIAGIIGMNPGETKEIAVDFPAEYG 237
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVR 290
++LAG+ ++KE+ +++D A FE+ + +R ++ ++ + +
Sbjct: 238 NQELAGQSAVFTITLKELKEKELPELDDDFAQEISEFETLAELRESLEKRFQEEHQSKIT 297
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED--LQ 348
+ +L + ++PE+++ E ++ + ++S+ + + +
Sbjct: 298 ANKEGALLKALEETVEVEIPETMISREVEYLMTQQAMQLSNYGIDITQFFTKENIPGIRE 357
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
A R+ + L + ++ +I V E E+ + + + + P+
Sbjct: 358 RSRPQAIERIKQSLALVQVAKQESISVEEAEILKEERKVMSQLKDKDV--------DPDR 409
Query: 409 LAE-LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEE 467
L E + A + + K + + + I V L E E+ ++S + S E
Sbjct: 410 LREVVEADLLKTKTLKWLEEHSTI--ELVPEGSLTPIEDEDEDEEDDVETSASDATVSVE 467
Query: 468 APS 470
A S
Sbjct: 468 AES 470
>gi|309776475|ref|ZP_07671461.1| trigger factor [Erysipelotrichaceae bacterium 3_1_53]
gi|308915866|gb|EFP61620.1| trigger factor [Erysipelotrichaceae bacterium 3_1_53]
Length = 425
Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats.
Identities = 75/436 (17%), Positives = 181/436 (41%), Gaps = 24/436 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E EL + + D+ + + + K N+ GFRPG+ P ++
Sbjct: 1 MSSTWELKEKSTGELTATVEGDTWKDAQKKAFKKLAKKVNLPGFRPGQAPEKLVRKQISS 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E IDE+ + + + + D RP++ I + D + + +
Sbjct: 61 QNILMEAIDEVAGDALSAGIKEHDLWVISRPALDIESIDED----------KVTFKFNVT 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYT 178
+ P++++ + L +T++ EV + +++ ++ + + +E + E GD +D+
Sbjct: 111 VKPEVKLGEYKGLDITKEAVEVSDADVEEEITRLQERFADLVVKEEGKVENGDTAVIDFE 170
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ V + + ++GS E ++G+ + K+I FPE++ ++LAG+
Sbjct: 171 GFKEGVAFDGGKGEAYPLVIGSGSFIPGFEEQVLGMGIEETKDINVTFPEEYQAEELAGQ 230
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
V ++ E+ + + N++L + E+ A + + +++ + QK +
Sbjct: 231 PVVFKVTVHEIKAKVLPEANDELVKQAEIENVETLEAFKEYSRKNLEESKKNQAEQKFEN 290
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYH 351
+IL I++ ++P+ ++ E + +++ + S + DE +
Sbjct: 291 EILTAITDNAEVEIPQVMINEETDSLVRDFEQRLQSQGFGLEQFKQVTGQTDEMIREEMG 350
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A +V +VL I + IE++EE++ S L + +++
Sbjct: 351 KDAFNKVKVRLVLEAIAAEEKIEISEEDINSELENIANMYNMPIEQVKQLISND-----A 405
Query: 412 LRAPIFEDKVIDHILK 427
+ + K ++ + +
Sbjct: 406 VSYDLRIRKALELVKE 421
>gi|33241264|ref|NP_876206.1| trigger factor [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|41018182|sp|Q7V9L7|TIG_PROMA RecName: Full=Trigger factor; Short=TF
gi|33238794|gb|AAQ00859.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 467
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 69/441 (15%), Positives = 182/441 (41%), Gaps = 16/441 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-K 60
++ K + ++ +P+ + SF + + + AN+ GFR GKVP S I G K
Sbjct: 7 KIKTKALPNSRIAIEFEVPAQQCKTSFEDALTTLCKSANLPGFRKGKVPKSVILQQIGSK 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + +++++++I + L + P + G + L + L D+
Sbjct: 67 RIQASALEKLLEKIWKQALKEESIEPLCEPELA---GGFEPLLENFNPEQTLSVTLETDV 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD---KVTVDY 177
P ++ + L + DE ++D + E K E +T
Sbjct: 124 APIPKLKTTKGLTTEAEPITFDESKVDELIEESRKQLATVIPVENRPANHSDIAILTFKG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T + D +E S ++++ + + E +VG+K + K I+ FP+D+ + G
Sbjct: 184 TFADDGSEIEGGSGESMEIDLEEGRMIPGFIEGIVGMKINETKTIDCQFPKDYQDEKAKG 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE-SAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K + + ++++ + +++D A + ++ +R + ++K ++ ++ +
Sbjct: 244 RKAKFDIQLQDLKTRELPKLDDDFAKQASDKNSLKELRNELTNRLKSDAKNRNKKNRQES 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
+L+ + + D+P++L++ E ++++ + ++ + D ++ A
Sbjct: 304 LLEALVKELEVDLPKTLIDEEVRNLIEQTARNFAEQGMDIKSTFTQDLVSSLMESSRPEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + + L + E NI+V + ++ + + + ++
Sbjct: 364 EINLKKNLALNALAEAENIKVDSQALEEKIKEVNIELANQKN------IDQKKLRQVVQN 417
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
+ ++K+ D + + I+++K
Sbjct: 418 DLLQEKLFDWLEANNTILEKK 438
>gi|257437690|ref|ZP_05613445.1| trigger factor [Faecalibacterium prausnitzii A2-165]
gi|257199997|gb|EEU98281.1| trigger factor [Faecalibacterium prausnitzii A2-165]
Length = 431
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 82/445 (18%), Positives = 175/445 (39%), Gaps = 25/445 (5%)
Query: 1 MQ-VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M+ V + E ++ + L + N E R+ IKGF G+ + I++ G
Sbjct: 1 MKLVSVETPEKSVCKMTFSATAEELEAASNAVYERTRASYTIKGFAKGEADRAQIEADRG 60
Query: 60 KS-ILSETIDEIIKE----IVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKL 114
+ + I++++ + +++ +A PS + + D
Sbjct: 61 EHTFWYDAINDLMDRDVPALYEAAMAEHGFKAVDEPSYDLVSVKKD---------EGFVA 111
Query: 115 RLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVT 174
+ + P++ ++ V V +KEID + + + G+ V
Sbjct: 112 TATTPLQPELNLTQTTGFHVECVTPAVTDKEIDAVLERRRNAAAELVPHKGPAVKGNIVH 171
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+DY +D + S +N +GS + + ++G K G++ EI FP + +KD
Sbjct: 172 IDYEGLLDGKPFQGGSAQNQPLQLGSGRMIPGFEDGILGHKGGEEFEINVTFPVRYHVKD 231
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKV 293
LAGK V + +V +N+D A ++ ++ A R +++ +
Sbjct: 232 LAGKPVVFKIKLIDVCVRQLPALNSDFAKKVGKVDTMEAFREQVRKQLHDGKHASALNRA 291
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEM----SSANQKSQNVDSIDEEDLQY 349
K Q+L +++ ++P LVE+ Y +Q ++ ++ S ++ + E
Sbjct: 292 KDQVLTQLASAAEGELPSVLVESTYQQEMQNIQQQLQMQRMSLDRYLSQIHQTRENFTAN 351
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
H A++ + L + + + T+EE+ L ++ R KK L+ + N
Sbjct: 352 VHAAAEKNTRARMALLQVAQNEGLVPTDEEITKNLQERADRT----KKTLEEVKANANIP 407
Query: 410 AELRAPIFEDKVIDHILKSVQIVDR 434
A R+ D +++ I ++
Sbjct: 408 AMQRSEAIRR-AADWVIEHSTIEEK 431
>gi|237753396|ref|ZP_04583876.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229375663|gb|EEO25754.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 429
Score = 158 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 93/440 (21%), Positives = 191/440 (43%), Gaps = 25/440 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + IP++ L ++ + + GFR GKVP IK YGK
Sbjct: 1 MKVN--KVDSANVIAQATIPADLLNKKLDKVTKAASKNLKLDGFRKGKVPAVAIKQRYGK 58
Query: 61 SILSETIDEIIKEIVPEILSKRDERA---AMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + E +++++ +IL + + A P IT E + ++L +
Sbjct: 59 QLEEDAQRECVQDLLQDILKELNVEATMLLGDPRITKFE----------KKDNGIELEVE 108
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVT 174
+ P I++ D I EV + +I+ ++ EIA E + + G+
Sbjct: 109 ISLAPTIKLDDIDSCIPEVKIPEVKDSDIEARLEEIASARAPLVKIEDGRRKLKDGEFAK 168
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+D+ +D E + +GS E L+G+K G++KEI FPE++ KD
Sbjct: 169 IDFEGFIDGKPFEGGKSEGYLLKIGSKSFIEGFEEQLIGMKKGEEKEINVTFPENYQAKD 228
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLV 289
LAGK + E+ + + ++++ A L + + A K+K+
Sbjct: 229 LAGKPAVFKVKLLEIQTKGKIEIDDNFAKTLFPDDKEASVESLRAKVKEQLQDEKKHEAY 288
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEM-SSANQKSQNVDSIDEEDLQ 348
++K +++D ++ K FD+P+S+VE E + +L+ + +K + +
Sbjct: 289 NNELKEKLVDNLNAKIIFDLPKSIVEQEMDLLLRNAFMTLSKEEQEKLAKDREAMQAKRE 348
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
A++ V +++ I +++NI++ + E+ + +Y + K M +++ K N
Sbjct: 349 EQRENAQKSVRVTLLIDAIAKRDNIQIPDNEVINTIYYEAMAMRQDPKAMFEYY-KNNNL 407
Query: 409 LAELRAPIFEDKVIDHILKS 428
+ ++ + ED+V+ +L
Sbjct: 408 IPAVKMAMLEDRVLTALLDK 427
>gi|16332069|ref|NP_442797.1| trigger factor [Synechocystis sp. PCC 6803]
gi|2499015|sp|Q55511|TIG_SYNY3 RecName: Full=Trigger factor; Short=TF
gi|1001378|dbj|BAA10868.1| trigger factor [Synechocystis sp. PCC 6803]
Length = 471
Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats.
Identities = 78/486 (16%), Positives = 192/486 (39%), Gaps = 32/486 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + L++ IP+ + ++ + NI GFR GKVP + + G+
Sbjct: 1 MKVTQEKLPDSQVGLEIEIPATASKKVYENVVKKLTRTVNIPGFRRGKVPRAIVIQRLGQ 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
S I + I+E+I + + + + + S+ + + + + L ++++ D
Sbjct: 61 SYIKATAIEELIDDSIKAAVKQEELPIIGNFSLRSD---MENLIQIFDPEAPLTIKVAAD 117
Query: 120 ILP--QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+ P + E S+ + + E +D+ + + E + +
Sbjct: 118 VFPEAEYEPESYKKITAQAEEIEYSADAVDQWLKGEQEKRATLVPVEDRPAALGDLAIVD 177
Query: 178 TVSVD-------NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
+ + + + + + + + +VG+ + K I FPED+
Sbjct: 178 YAAFQVAEDGQAGEAIAEVKGSDFEVTLEDGRFVAGIVDGIVGMAVDETKLIPVTFPEDY 237
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLV 289
++ +AG+ V +KE+ +++D A FE+ + ++ ++ ++ ++
Sbjct: 238 PLEAVAGEDVLFEIKLKEIKFRELPELDDDFAEDVSEFETMAELKADLEKQFQEQAKQRT 297
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEE 345
+K I + +T D+PE++++ E + ++ + E+ Q + D + +
Sbjct: 298 DDNIKAAIKKKLGELFTGDLPETMIKQECDRLVAQTAMELERMGLDVSQLFRQGDDMLQT 357
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
A + T +++G I ++ I+ TE E++ + F G +
Sbjct: 358 LKDNSRPEAIANLKTDLMIGAIAKEEKIQPTEAEVKERCDELRQEFKGEKID-------E 410
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ + + + E KV+D + + + + L + S + E D ++ E
Sbjct: 411 SRLVNFVESSLTESKVLDLLKEWADV-------ELLPEGSLSQTEEDTPDDDAEEEAIVD 463
Query: 466 EEAPSE 471
EA S+
Sbjct: 464 VEATSD 469
>gi|291277237|ref|YP_003517009.1| peptidyl-prolyl cis /trans isomerase [Helicobacter mustelae 12198]
gi|290964431|emb|CBG40281.1| trigger factor (peptidyl-prolyl cis /trans isomerase, chaperone)
[Helicobacter mustelae 12198]
Length = 468
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 90/469 (19%), Positives = 190/469 (40%), Gaps = 25/469 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ +I L D + + + GFR GKVPL I+S Y
Sbjct: 1 MELRTNKINSANVIASGVITLKDLEDKITKIATRLSKTMKLDGFRKGKVPLQLIRSRYQD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDE---RAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
SI + + I+E++ L + P +T E +G D+++++S
Sbjct: 61 SIRQDAQKDAIQEMLQHALKDLHLDARQVLGDPMMTKME--------EKDGGFDVEIKIS 112
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
++ +V +E + + + + K+ E D D+
Sbjct: 113 LTPDIPLDSVPACIPEVKVPRVTEEEVKTRLEEIAKREAPLIDAPKDKRLENDDVAVFDF 172
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD E +N + I+GS + ++G+ + KEI FP ++ +K LA
Sbjct: 173 EGFVDGKPFEGGKAENFELIIGSGSFVPGFEDAMLGMLADEAKEISITFPAEYHVKHLAS 232
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSE-----FLVRQK 292
K + + +N+DLA +L ++ +A +IK+ E + ++
Sbjct: 233 KDATFKVKLHAIKVKDKPQINDDLAKKLLPQNATASLRDLDAEIKKQLELEAKTKVYNEE 292
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQYYH 351
+K ++++ K FD+P+ ++E E + + + ++ + Q +E + +
Sbjct: 293 LKEKLVENFLEKIHFDLPDLVIEQEMDLLFRNSLSSIAEEELKTLQENPEKAKEKRESFR 352
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
AK V ++ + ++ NI V + E+ +Y + + +++++++ N L
Sbjct: 353 DEAKNSVQVTFIIDALAKQKNITVQDNEVFQTVYYEAMMMGQNPTQIIEYYKSN-NLLPA 411
Query: 412 LRAPIFEDKVIDHILK-SVQIVDRKVTFDQLFDNSSESSPEKLLDKSSK 459
++ + ED+V+ ++L V+ VD+ L S + + E K SK
Sbjct: 412 IKMAMVEDRVLQNLLDTKVEFVDK------LPQKSEDKAKEGASKKESK 454
>gi|159904322|ref|YP_001551666.1| trigger factor [Prochlorococcus marinus str. MIT 9211]
gi|238687132|sp|A9BD99|TIG_PROM4 RecName: Full=Trigger factor; Short=TF
gi|159889498|gb|ABX09712.1| FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
[Prochlorococcus marinus str. MIT 9211]
Length = 471
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 69/440 (15%), Positives = 177/440 (40%), Gaps = 16/440 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-K 60
+V K + +++ I + + +S+ + + + AN+ GFR GKVP + + G K
Sbjct: 7 KVKTKSMPDSRLAVELEISAKQCKESYQQALSKLSKTANLPGFRKGKVPQAVLLQQVGAK 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + I+++++ + P+ L + P + G + L L L DI
Sbjct: 67 RIQASAIEKLLEVVWPQALQQESIEPLCEPELI---GGFEALLENFNPDSKLTLTLETDI 123
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDY 177
P ++ S L V + D K+ID + + K E + + V+ +
Sbjct: 124 SPIPQLKSSKGLTVEAEKVVFDPKKIDELIEQSRKQLSTLIPVENRPAKKGDVAVVSFEG 183
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ +N +E + ++ + + E ++G+ D+K +E FP+D+ +D
Sbjct: 184 KFTDNNSPIEGGNSDSMDIELEKGQMIPGFVEGIIGMNINDEKTVECTFPKDYPQEDARN 243
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE-SAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+K + + +K++ + +++D A + + +R K+K+ + + +
Sbjct: 244 RKAKFDIKVKDLKTRELPKLDDDFAKQASDKDSLEELRKELEAKLKEDAHQRSIKNRQEA 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLA 354
+L + + D+P++L+E E ++++ + ++ + + + + A
Sbjct: 304 LLKALVEQLEIDLPKTLIEIETRNLIEQTARNFAQQGIDVKSTFTPELINKLMDSSRPEA 363
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + + ++ IEV +E+ + + + + +
Sbjct: 364 IENLRRQFAMQALRKEEGIEVPNKEVDKKFEEVKKELSKEKNIDFEKLK------EAVLE 417
Query: 415 PIFEDKVIDHILKSVQIVDR 434
+ +DKV + ++ +++
Sbjct: 418 DLLQDKVFTWLEENNTVIET 437
>gi|328950944|ref|YP_004368279.1| Trigger factor [Marinithermus hydrothermalis DSM 14884]
gi|328451268|gb|AEB12169.1| Trigger factor [Marinithermus hydrothermalis DSM 14884]
Length = 407
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 67/427 (15%), Positives = 159/427 (37%), Gaps = 36/427 (8%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSETI 67
EG + ++ V +P+ + ++ +++ + + GFRPGK P I++ G+ +L+E
Sbjct: 8 EGYRVKIKVEVPAEEVARTYESVVKEYAKRVRVPGFRPGKAPRKVIEARIGREALLAEAR 67
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
+ ++ PE + + + + + +E + P++ +
Sbjct: 68 ERLVDRTYPEAVKELELLPVSA-------RIVEDETSPVEEGQPFTYVAEVENYPEVTLP 120
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ + EV E+ + + + + E E+ + +
Sbjct: 121 DWQSFALEAKRVEVTEEMVAEALERLRQRYAEIVTVEREAR-------------EGDHVV 167
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+++ +F V E L+G K GD+ ++ E + I
Sbjct: 168 IETEDGARFPVDLTRAQPHVKEALMGAKAGDEVQVPIKDEEG-------NVTREVRTRIL 220
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
EV ++++ A E+ ++G + +++ ++ Q K + LD ++
Sbjct: 221 EVKEVRLPELDDEFAKTAEAENLEELKGKVRESLERQADREFAQAKKDEFLDKLAQALEV 280
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI------DEEDLQYYHMLAKRRVLTG 361
++P S++ E +L+ + +++ ++ EE Q A+RRV G
Sbjct: 281 EIPPSMIAEEERHLLRHLEEDLAQRGVPLRDYLKDLEKEGKLEEFKQDLRQQAERRVRRG 340
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ L + E +E+T+EE + L + + P L R + +K
Sbjct: 341 LALEKLVEDLGVELTDEEWKEHLAALARSYGMTPAEFQRAVG--PTELERQRLGLLREKA 398
Query: 422 IDHILKS 428
++ +K
Sbjct: 399 LEEAVKR 405
>gi|162447397|ref|YP_001620529.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Acholeplasma
laidlawii PG-8A]
gi|161985504|gb|ABX81153.1| trigger factor, FKBP-type peptidyl-prolyl cis-trans isomerase
[Acholeplasma laidlawii PG-8A]
Length = 427
Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats.
Identities = 81/434 (18%), Positives = 166/434 (38%), Gaps = 19/434 (4%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SI 62
+ + + + + I+ IKGFR GKV + +G+ ++
Sbjct: 2 KFEHIKKNHVKFTFTVTPAEFEHALEHAFAHIKDDVEIKGFRKGKVTQKVYEQKFGETAL 61
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
+E ++ I + +D P D+ I T D ++ I P
Sbjct: 62 YAEALNHAIGHKYNDATLVKDFTIVSDP------MNIDLDFDKISRTEDFEVSFEVAIKP 115
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVD 182
++EI ++ ++V + EV EKE+D + + N E KE E GD D+ D
Sbjct: 116 EVEIENYKGVEVAKVDTEVTEKEVDENINSLLAQNAILEPKEGALENGDTAIFDFEGFQD 175
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
V E +N +GS E ++GLK G+ ++++ FPE + ++LAGK
Sbjct: 176 GVAFEGGKAENFSLEIGSGQFIPGFEEGMLGLKVGESRDVDVTFPEQYQAENLAGKPAVF 235
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ E+ S +N++ V L E + ++ ++ + ++++ ++
Sbjct: 236 KVVLHEIKSKKLAELNDEWVVSLNREGISTVDQLKASIKADLEASKQEQAKRELTDAVIT 295
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAK 355
+ +VP+S+ ++E + V + E Q A+
Sbjct: 296 EVVKLAKVEVPQSMFDSEIENFKKNVEAQAKQYQLDMDTFIQLSGLTKELFEQQAKEQAE 355
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+RVL +V+ I +K N T EE+ + + ++ + +
Sbjct: 356 KRVLQSLVIEAIAKKENFTATPEELSLRYEELANHYKMEVNEIKKYISD-----ELVMND 410
Query: 416 IFEDKVIDHILKSV 429
I +K + ++++
Sbjct: 411 IAFEKAVTFLVENA 424
>gi|313887813|ref|ZP_07821493.1| trigger factor [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846156|gb|EFR33537.1| trigger factor [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 449
Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats.
Identities = 85/453 (18%), Positives = 205/453 (45%), Gaps = 17/453 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-L 63
E D+++ + + NE + + I GFR G VP+ I+++YGK +
Sbjct: 3 INKKENNTVFFDIVLKREDIKKAENEVYKKNKKHFQIPGFRKGHVPMKMIENMYGKDVFF 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+ I+E++ + + + + D + +P+I I+E IE DL +++S D+ P+
Sbjct: 63 EDAINELLPQEYEKAVKELDLKVVDQPNIDIDE-------ESIEKAEDLVIKVSVDVRPE 115
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSVD 182
+E+ ++ +++ EV ++ ID ++ N + E GD V +D+ SVD
Sbjct: 116 VELKDYEGIEIEDPTIEVTDELIDSEVENQRAMNARIINVDDRAVEDGDTVNIDFKGSVD 175
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
E ++ +GS E L+G K G++ +I FPED+ KDLAGK +
Sbjct: 176 GKYFEGGEAESQDLKIGSNTFIPGFEEQLIGHKIGEEFDITVKFPEDYHQKDLAGKDAKF 235
Query: 243 NFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
+ + ++++ F++ + +K ++ + + +R+ +D I
Sbjct: 236 EIKLNSISYEELPELDDEFVKDISEFDTLDEFKADLRKKKEEEFKTTSEMEKQRRAIDKI 295
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAKRR 357
D+PE ++ + + +++ + + ++ + ++ + A++
Sbjct: 296 GEMIEADIPEGMINAQIDDMIRNYDQSLRAQGISFEDYIKMIGQSLDDFKKTMRPEAEKT 355
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY--PNALAELRAP 415
V + L + + IE+T+EE++ + + + + +K ++ ++Y + +R
Sbjct: 356 VKNDLALEALVKAMKIEITDEEIEEEVNKVVEEYFKDDKDHMEKMREYMLNDNKDVVRDD 415
Query: 416 IFEDKVIDHILKSVQIVD-RKVTFDQLFDNSSE 447
+ + K I+ +++ + V+ +++T + + + +
Sbjct: 416 LEKRKAIETLVEKAKFVEPKEITKEDIEEVKED 448
>gi|86140706|ref|ZP_01059265.1| FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor)
[Leeuwenhoekiella blandensis MED217]
gi|85832648|gb|EAQ51097.1| FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor)
[Leeuwenhoekiella blandensis MED217]
Length = 440
Score = 157 bits (395), Expect = 5e-36, Method: Composition-based stats.
Identities = 76/456 (16%), Positives = 178/456 (39%), Gaps = 31/456 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L L V I + + + ++D R ANI GFR G VP+ ++ YGK
Sbjct: 1 MNITRENIDDLNAVLKVDIAKDDYNEKVQKVLKDYRKSANIPGFRKGHVPMGLVQKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L + +++++++ + + L++ P E L D +
Sbjct: 61 AVLVDEVNKLLQDSLQKYLTEEKLDVLGNPLPKDQE-------DLNWDAGDYTFEFELGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDK--VTVDYT 178
P+ E+ +T VD+K +D Q+ I K K+ + V+
Sbjct: 114 APKFEVDLQPKKAITSYTIVVDDKMVDNQITTIQKQYGKITSKQEVENDDEVSGSFVNEE 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + + +K + + + V K ++ + S ++ K
Sbjct: 174 AEFEKKTMFEVAKLKGKANTSAFVGAKVGDTVTVSTKGLFEEAGDYRSFLGLSEEEAKEK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++F+I+EV P ++ +L +L +KIK+ E +Q+ +Q+L
Sbjct: 234 NLEVSFTIEEVNRREPADLDQELFDKLYGPGVITSVTELKEKIKEEGENQFKQQSDQQLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++ + + L E + + E+ + +++ +
Sbjct: 294 NDVTERLIENTEFDL------------PAEFLKKWIQRSGEKELTFEEAVEEYERSEKGL 341
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPGHEKK------MLDHFQKYPNA 408
++ G I N +++T EE+++ + Q+ +F ++ K + +
Sbjct: 342 RYQLIEGKIIADNELQITFEEIKAYAKEMIKAQMAQFGQNDPKDEELEGIAARILSNQDE 401
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ L + K++D ++V++ +++VTFD+
Sbjct: 402 VKRLSEQLMNKKLLDFFKENVKLKEKEVTFDEFVKE 437
>gi|295101837|emb|CBK99382.1| trigger factor [Faecalibacterium prausnitzii L2-6]
Length = 431
Score = 157 bits (395), Expect = 5e-36, Method: Composition-based stats.
Identities = 74/445 (16%), Positives = 168/445 (37%), Gaps = 25/445 (5%)
Query: 1 MQ-VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M+ V + E ++ + L + N E R+ IKGF G+ + I++ G
Sbjct: 1 MKLVSVETPEKSVCKMTFSASAEELEAASNAVYERTRATYTIKGFAKGEADRAQIEADRG 60
Query: 60 KS-ILSETIDEIIKE----IVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKL 114
+ + I++++ + + +++ A P + + D
Sbjct: 61 EHTFWYDAINDLMDKDVPALYDAAMAEHGFHAVDEPVYDLVSVKKD---------EGFVA 111
Query: 115 RLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVT 174
+ + P++ ++ + EV +KEID + + + G+ V
Sbjct: 112 TATTALQPELNLTQTTGFKTECVTPEVTDKEIDAVLERRRAMAAELVPHKGPAVKGNIVH 171
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+DY ++ + +N +GS + E ++G K G+ +I FP + +KD
Sbjct: 172 IDYEGLLEGKPFNGGAAQNQTLQLGSGRMIPGFEEGILGHKGGEAFDIFVTFPARYHVKD 231
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLA-VRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
LAGK V + +V +N+D A ++ R Q++ +
Sbjct: 232 LAGKPVVFKIKLHDVCVRQLPALNSDFARKAANVDTMDEFRAQIRQQLHDSKHAAALNRA 291
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQY 349
K IL ++ ++P LVE+ Y +++V+ ++ ++ + E
Sbjct: 292 KDAILTQLAAAAEGELPSVLVESAYQQEMERVQQQLQMQRLSLDRYLSQIHQTRESFTAA 351
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A++ + L I + ++ TEE++ L ++ R ++ K + +
Sbjct: 352 VRTAAEKNTRARMALLQIAQNEDLVPTEEDIDKTLSERAERTKKTLAEV-----KAASNV 406
Query: 410 AELRAPIFEDKVIDHILKSVQIVDR 434
+R + D++++ I ++
Sbjct: 407 EAIRRNEGIRRAADYVIEHSTIEEK 431
>gi|295397904|ref|ZP_06807966.1| trigger factor [Aerococcus viridans ATCC 11563]
gi|294973884|gb|EFG49649.1| trigger factor [Aerococcus viridans ATCC 11563]
Length = 426
Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats.
Identities = 80/435 (18%), Positives = 165/435 (37%), Gaps = 22/435 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L + + + I+ +I GFR GKV ++G+
Sbjct: 1 MSVNYEQTSTNEGILHFTVAKEDAAKAKKQAFNRIKKDVSIPGFRKGKVNYQMFVKMFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + ++ ++ E + + + +P I E D +L
Sbjct: 61 QSLIEDAVNIVLPEAYTKAVEESGLEVVTQPRFDIKSA---------EPNADWELIAYVA 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P++++ + +L V + EV E+EI+ +++ N +KE +E GD V +DY
Sbjct: 112 TKPEVKLGQYKNLTVAKQEVEVTEEEINDRLSAAQANLSELALKEGAAETGDTVVIDYEG 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D +N +GS + LVG+K GD+ E+ FPED+ +LAGK
Sbjct: 172 FQDGEAFAGGKGENHSLELGSDSFIPGFEDQLVGVKEGDEVEVNLTFPEDYHADELAGKD 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ EV + ++++ A E+ ++ +++ E ++ + +
Sbjct: 232 ATFKVKVHEVKTKEVPELDDEFAKDVDEEVETLDELKEKYRKELTDQKEAAAKEAREEEA 291
Query: 298 LDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHM 352
L D+P +V E + + EM + + + + +
Sbjct: 292 LRLAVENAEITDLPHEMVHEEVHRQMDHYLNEMQRSGISKEMYFQLTGTTEADLHTQFEQ 351
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A RV T ++L I E NI E+++ + + +++ + + L
Sbjct: 352 DADTRVKTNLILEQIVEDENITAEVEDVEKEIATLAETYGMTVEEVKNVVTED-----ML 406
Query: 413 RAPIFEDKVIDHILK 427
+ I K + I
Sbjct: 407 KNDIALKKAMALITD 421
>gi|188527361|ref|YP_001910048.1| trigger factor [Helicobacter pylori Shi470]
gi|238691920|sp|B2UT36|TIG_HELPS RecName: Full=Trigger factor; Short=TF
gi|188143601|gb|ACD48018.1| trigger factor [Helicobacter pylori Shi470]
Length = 451
Score = 156 bits (393), Expect = 7e-36, Method: Composition-based stats.
Identities = 89/460 (19%), Positives = 212/460 (46%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L + L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKLSVENLEKRYDKIAQKIAPKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ L + P+ T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNALKELGIENKDLIGSPNFTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSQYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ ++++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLRQIQAREALEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEGVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|257452230|ref|ZP_05617529.1| trigger factor, PPIase [Fusobacterium sp. 3_1_5R]
gi|257465975|ref|ZP_05630286.1| trigger factor, PPIase [Fusobacterium gonidiaformans ATCC 25563]
gi|315917131|ref|ZP_07913371.1| trigger factor [Fusobacterium gonidiaformans ATCC 25563]
gi|313691006|gb|EFS27841.1| trigger factor [Fusobacterium gonidiaformans ATCC 25563]
Length = 429
Score = 156 bits (393), Expect = 8e-36, Method: Composition-based stats.
Identities = 78/439 (17%), Positives = 174/439 (39%), Gaps = 19/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K E + + + ++ + I + IKGFR G P + + Y
Sbjct: 1 MKYEVKKLEQSAVAISMKLEGTEFLPIRDKVVAKIGKEVEIKGFRKGHAPADAVLAQYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E E++ + I+ +++ + + ++ D+
Sbjct: 61 AVIDEVTQEVVNSNMETIIREKEIAPIS----------TIRNPKVTMNDDSFEMDFEIDV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
P+I++ + + ++ E E+ + ++M + + ++ ++E+GD V + +
Sbjct: 111 YPEIKLGEYKGISAEKEAFEFKEEMLTQRMESMRTSKAKLVDCPEDHKAEMGDTVNLAFE 170
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D V E + Q +G+ + LVG G + E++ FPE++ +LAGK
Sbjct: 171 GFIDGVPFEGGKADSHQLKLGTKSFIDTFEDQLVGYVKGQEGEVKVNFPEEYHAPELAGK 230
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I + +N++LA LGFES ++ ++ I + +++
Sbjct: 231 PAIFKVKINAIQKMETPEMNDELAKELGFESVEDLKTKTTENIIAEGTQRAEDEYLGKLI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVR----FEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+ F+VP S+V+ E +++ + S + Q + + + +
Sbjct: 291 LKVVEASEFEVPVSMVQQEIQNEMRRFEQQLQQQGLSLDMYMQMMGGDRKAFEEQIRPMV 350
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA---E 411
+ R+ + +VL I IE T+E++ + + + KM + + + A
Sbjct: 351 EPRIKSDLVLAEIARNEKIEATDEDVTEKMAEVAKMYGMEVAKMEEELKAHNQLDAFKYS 410
Query: 412 LRAPIFEDKVIDHILKSVQ 430
+RA I K ID I +
Sbjct: 411 VRAEIVMKKTIDFIKAEAK 429
>gi|317058773|ref|ZP_07923258.1| trigger factor [Fusobacterium sp. 3_1_5R]
gi|313684449|gb|EFS21284.1| trigger factor [Fusobacterium sp. 3_1_5R]
Length = 443
Score = 156 bits (393), Expect = 9e-36, Method: Composition-based stats.
Identities = 78/439 (17%), Positives = 174/439 (39%), Gaps = 19/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K E + + + ++ + I + IKGFR G P + + Y
Sbjct: 15 MKYEVKKLEQSAVAISMKLEGTEFLPIRDKVVAKIGKEVEIKGFRKGHAPADAVLAQYKD 74
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E E++ + I+ +++ + + ++ D+
Sbjct: 75 AVIDEVTQEVVNSNMETIIREKEIAPIS----------TIRNPKVTMNDDSFEMDFEIDV 124
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
P+I++ + + ++ E E+ + ++M + + ++ ++E+GD V + +
Sbjct: 125 YPEIKLGEYKGISAEKEAFEFKEEMLTQRMESMRTSKAKLVDCPEDHKAEMGDTVNLAFE 184
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D V E + Q +G+ + LVG G + E++ FPE++ +LAGK
Sbjct: 185 GFIDGVPFEGGKADSHQLKLGTKSFIDTFEDQLVGYVKGQEGEVKVNFPEEYHAPELAGK 244
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I + +N++LA LGFES ++ ++ I + +++
Sbjct: 245 PAIFKVKINAIQKMETPEMNDELAKELGFESVEDLKTKTTENIIAEGTQRAEDEYLGKLI 304
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVR----FEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+ F+VP S+V+ E +++ + S + Q + + + +
Sbjct: 305 LKVVEASEFEVPVSMVQQEIQNEMRRFEQQLQQQGLSLDMYMQMMGGDRKAFEEQIRPMV 364
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA---E 411
+ R+ + +VL I IE T+E++ + + + KM + + + A
Sbjct: 365 EPRIKSDLVLAEIARNEKIEATDEDVTEKMAEVAKMYGMEVAKMEEELKAHNQLDAFKYS 424
Query: 412 LRAPIFEDKVIDHILKSVQ 430
+RA I K ID I +
Sbjct: 425 VRAEIVMKKTIDFIKAEAK 443
>gi|325970911|ref|YP_004247102.1| Trigger factor [Spirochaeta sp. Buddy]
gi|324026149|gb|ADY12908.1| Trigger factor [Spirochaeta sp. Buddy]
Length = 449
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 85/452 (18%), Positives = 199/452 (44%), Gaps = 21/452 (4%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
K E L V + + + + + ++ + +KGFR GK P+S ++ +GK+I
Sbjct: 6 SIKELENSSVALTVTVTAPTIENDYKAALQKYAATIQLKGFRKGKAPVSVLEGKFGKAIR 65
Query: 64 SETIDEIIKEIVPEILS--KRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
E+ I+E + E L + + + E + + T + D+ ++YD++
Sbjct: 66 EESTFNTIEEALKEALQGVEDKYKPLS---FSTPELQDEETLLPFQADKDITFTVTYDVM 122
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY-TVS 180
P E+ ++ L VT V ++ ++ ++ ++ + N K+ + +GD VTVDY +
Sbjct: 123 PTFELPAYKGLSVTYPKVAVSDEAVNAEIDKLREQNAMVIDKQDAAAMGDIVTVDYVELD 182
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N + +K F +GS F + LVG+K G++K + + ED +I+ AGK +
Sbjct: 183 DQNNEVAGTERKEFVFTLGSTYNFYQIDSDLVGMKAGEEKTFSKTYAEDSTIEGYAGKTI 242
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
L ++ V V++ND A + +++ + +K+++ + + Q+ +
Sbjct: 243 TLKVAVSAVKFRDVPVLDNDFAQDVKEEYKTVEDLVKATREKLQKALDAKLEQEKLNALS 302
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY----YHMLA 354
+ + T VP S+++ E + + + + ++ ++ + + A
Sbjct: 303 EELLKGTTIAVPASMIDLEIDQSWNRYVKQTGLSEEQILQFLQFQQKTKEDVTAPWREAA 362
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ + +++ I + V EEE+ AL +QL ++ ++++ A +
Sbjct: 363 EKNLRVQLIMDKIKDTEKFTVDEEELNKALEEQLK--DVTDESQREYYK------AMIED 414
Query: 415 PIFEDKVIDHILKSVQIVD-RKVTFDQLFDNS 445
+ K+ + ++ V+ +V ++ +
Sbjct: 415 DMRFQKIAPFLQENNTFVEGDEVAYEVFMSQT 446
>gi|325479705|gb|EGC82795.1| trigger factor [Anaerococcus prevotii ACS-065-V-Col13]
Length = 452
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/433 (18%), Positives = 174/433 (40%), Gaps = 16/433 (3%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-LS 64
K E + + + + + + + +S+ + GFRPG V ++ +YG I
Sbjct: 5 KSHENNIAKFEFDVSYDEFKKATDTVYKRNKSRYRVDGFRPGHVSRKVLEKMYGPEIFYD 64
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
E I + + + + D +PS+ +++ IE D+ ++ + P
Sbjct: 65 EAIKIVFPKPYEAAVEELDLEPVDQPSVDLDD---------IEEGKDITFKVEVETKPHP 115
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYTVSVDN 183
E+ + L V + EV +++I+ ++ N E E+++GD V +D+ +D
Sbjct: 116 ELGDYSKLIVEEVPSEVTDEDIEAELKRQQDENARLAPVEEGEAKMGDTVNIDFDGYLDG 175
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E +N +GS E + G GD+ ++ FPED+ ++ GK +
Sbjct: 176 ERFEGGKAENYDLELGSNTFIKGFEEQVAGHALGDKFDVNVTFPEDYQAQEFQGKDAKFE 235
Query: 244 FSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
I + ++++ A F++ ++ +KI + E + ++ Q ++ +
Sbjct: 236 VEINSITRKELPELDDEFAKDISEFDTLDELKADLKEKIAKEKENYAKNMIQNQAIEALV 295
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHMLAKRRV 358
NK P +V +E + LQ + + + + D Y A+ RV
Sbjct: 296 NKSEVSAPNGMVNSEIDFELQNLDQRLQQMGITLAQYIEMTKMDINQIRGQYKDQAEARV 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+V+ + K IEVTEEE ++ + + + + + + L I
Sbjct: 356 KANLVIDEVALKEAIEVTEEEKEAEIKEAAENYGVEDLEKFKEIFAKNISDKTLEENIKR 415
Query: 419 DKVIDHILKSVQI 431
K ++ ++ + ++
Sbjct: 416 RKAVEILVANAEV 428
>gi|299143349|ref|ZP_07036429.1| trigger factor [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517834|gb|EFI41573.1| trigger factor [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 434
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 77/439 (17%), Positives = 193/439 (43%), Gaps = 18/439 (4%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-L 63
K E + D+I+ + + + E + I GFR G P I+++YGK + L
Sbjct: 4 IKSREKNTVKFDMILKAEDVKKAETEVYNKNKKYFQIPGFRKGHAPRKIIENVYGKGVFL 63
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+ ++E++ + E + + +P I I E D+K+ +S + P+
Sbjct: 64 EDAVNELLPKYYEETVKELGIEVVDQPEINIEEA---------NSGEDIKVEVSVTVKPE 114
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSVD 182
+ + + +++V EV E+ I+ ++ N + ++IGDKV +D+ V
Sbjct: 115 VVLGEYKNIEVEDVKYEVTEELINSELDNQRHMNARLVNIDDRAAKIGDKVNIDFKGFVG 174
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ E + + + +GS + +VG GD+ ++ FPE++ ++L GK+ R
Sbjct: 175 DETFEGGAAEGHELELGSNTFIPGFEDQIVGKNIGDEFDVNVTFPEEYFSEELKGKEARF 234
Query: 243 NFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
+ + ++++ F++ + +K ++ E +++ + ++L+ +
Sbjct: 235 EVKLNSISFEELPELDDEFIKDISDFDTVDEYKADIKEKKEKEFEEREKREKEEKVLEKV 294
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAKRR 357
+VP+++V ++ + +Q + + ++ + E + A ++
Sbjct: 295 VETMEVEVPDAMVNSQIDSQVQNFDRNLKAQGMSLEDYIKMLGTTMEAFRENLRADALKQ 354
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY--PNALAELRAP 415
V T + + + + N EV+EEE++S + + + + +++ ++Y N +
Sbjct: 355 VKTSLAIEAVAKAENFEVSEEEVESEIDKMVKDYFKDDEEQQKKMKEYMLENNKEGFKEN 414
Query: 416 IFEDKVIDHILKSVQIVDR 434
+ K +D + ++ + V++
Sbjct: 415 LISKKTVDFLFENAKFVEK 433
>gi|153955961|ref|YP_001396726.1| trigger factor [Clostridium kluyveri DSM 555]
gi|219856303|ref|YP_002473425.1| hypothetical protein CKR_2960 [Clostridium kluyveri NBRC 12016]
gi|189035933|sp|A5N2K9|TIG_CLOK5 RecName: Full=Trigger factor; Short=TF
gi|254788996|sp|B9E686|TIG_CLOK1 RecName: Full=Trigger factor; Short=TF
gi|146348819|gb|EDK35355.1| Tig [Clostridium kluyveri DSM 555]
gi|219570027|dbj|BAH08011.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 430
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/438 (18%), Positives = 194/438 (44%), Gaps = 17/438 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E +L++ + +++ +S + K NI GFR GK P++ IK YG+
Sbjct: 1 MNVKMEKIEENVVKLEITVEADKFNESMKKAFAKNAKKFNIPGFRKGKAPMNIIKKYYGE 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + + P+ L + + P I + + I +
Sbjct: 61 GVFYEDAMSFCCESTYPDALKENNVNPVDYPKIEVVQ---------IGEGKEFIYTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
+ P++++ + ++V ++ +V E++I++++ + + + E KE E G+ +D+
Sbjct: 112 VFPEVKLGEYKGVEVKKNTYDVKEEDIEQELKNMQQKDARIETKENGSIENGNIAIIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD E ++ Q +GS E L+GL GD KE+ FPE++ I DL GK
Sbjct: 172 GFVDGKEFEGGEGQDYQLEIGSGTFIDNFEEQLIGLNAGDSKEVNVKFPEEYGIDDLNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++KE+ ++++ A F++ ++ K ++ ++ ++ + +
Sbjct: 232 EAVFKVTVKEIKVKEIPELDDEFAKEVSEFDTLDEVKEDIRNKKQEANKLREEREFEEAV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
L+ + + ++PE +VE E + +++ + + + +++ +Y
Sbjct: 292 LEAVCSNTEINIPEVMVEKEVDNMIRDLETRLKYQGLDLETYYKYTNNDEQKVREYMRET 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
++++V +V+ I + +E ++EE++ + ++ + + + L+
Sbjct: 352 SEKKVKADLVITEIAKVEKVEASDEEIKEKATEIAKQYGSDDVEKMAKIILD-GQKEYLK 410
Query: 414 APIFEDKVIDHILKSVQI 431
I +KV+ ++ S +I
Sbjct: 411 MQIVNEKVMKMLVDSSKI 428
>gi|320535323|ref|ZP_08035442.1| trigger factor [Treponema phagedenis F0421]
gi|320147823|gb|EFW39320.1| trigger factor [Treponema phagedenis F0421]
Length = 463
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 83/453 (18%), Positives = 187/453 (41%), Gaps = 14/453 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
Q K + EL+V + + + ++ I + I GFR GKVP+ ++ YG++
Sbjct: 10 QKTFKSLPKSQVELEVTVNKDDVRTHYDGIITKYVKELQIPGFRKGKVPVQVLEQKYGEA 69
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ +E ++I++++ EI +E D + ++YD+L
Sbjct: 70 LRAEASSDLIEKVLEEIFRDANE----YERPLPYSYPDMKEVPEFNTEKDFQFAVTYDVL 125
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV---DYT 178
P+IEI D T + E++I ++ +I + N +
Sbjct: 126 PKIEIKKIDGFSFTIPEVTISEEDIQEELKDIQQRNALVIDRADTDLAEKDNIATIDYSE 185
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ ++ ++E +++ F +G+ + + ++G+K G+ K++ + +PED K+LAGK
Sbjct: 186 LDEEDTVIEGSERQSFTFTIGTEQNLFKLDDDVIGMKKGESKDVTKTYPEDDPNKELAGK 245
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++ + + +++DLA F + M+ + +++ E + Q
Sbjct: 246 TKKIRVKLAALKRRDLPAIDDDLAQDVNEKFSTLQDMKDDIKKNLEKSVENKLNQTKIEA 305
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY----YHM 352
L + +FD+PES+V E + + + + E +
Sbjct: 306 FLKEAVKENSFDLPESMVLTELESRWIMTARQFGMDPAQLEKLMGATENTKASTMSAWRP 365
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ R+ I++ T+ + NI +T EE+++ + E+++ H++ L
Sbjct: 366 EAEERLKARIIVETLLKDRNISITPEEIEAEYKKIAENASIKEEEVKAHYESDLREKELL 425
Query: 413 RAPIFEDKVIDHILKSVQIVD-RKVTFDQLFDN 444
+ E K+ D + + +K++ + F+
Sbjct: 426 IEDLKETKLYDQLFEKCTFTTSKKLSAKKFFEK 458
>gi|57238932|ref|YP_180068.1| trigger factor [Ehrlichia ruminantium str. Welgevonden]
gi|58578865|ref|YP_197077.1| trigger factor [Ehrlichia ruminantium str. Welgevonden]
gi|67461615|sp|Q5HBX6|TIG_EHRRW RecName: Full=Trigger factor; Short=TF
gi|57161011|emb|CAH57917.1| trigger factor [Ehrlichia ruminantium str. Welgevonden]
gi|58417491|emb|CAI26695.1| Trigger factor [Ehrlichia ruminantium str. Welgevonden]
Length = 446
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 97/447 (21%), Positives = 196/447 (43%), Gaps = 22/447 (4%)
Query: 3 VIEKFSE-GLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
V E ++ LKRE + I + + ++ +I I GFR GK + IK Y +
Sbjct: 7 VKEILNDNKLKREYEFTIDNKYFFSQLDAKLLEIAKNVKIPGFRAGKASIDLIKKEYLNN 66
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVD----LKLRLS 117
++ I +I+++ E + + +++I L +LS
Sbjct: 67 AVNTLIRKIVEDTSSEFIKNGKFGEIISSNVSIISCPDYGMDVSSTSGDPVGDNLVYKLS 126
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE---VKETESEIGDKVT 174
++++P+ + + DD+ ++ ++ + +I + + K F E +IGDKV
Sbjct: 127 FEVMPEAPLIALDDIVLSDIEADIQDSDISEFIENLKKQCSEFVEVSDSEYRVKIGDKVI 186
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
VDY + +L+ K++ IVG + + + L+G+K G+ K FP+++ +
Sbjct: 187 VDYQNRIKGKMLKGGDTKDLAVIVGRGLVLKDFEDQLIGMKIGESKSFPIQFPDNYGVAY 246
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
L GK ++ ++K +F V N ++ F+ E A++ KIKQ + + VK
Sbjct: 247 LVGKSADVSVTVKNIFMMKAVEENENVIKYYQFKDEQALKDFARNKIKQQFDKISFAIVK 306
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+++ DY+ Y+ DVPE +V N+ +Q + A
Sbjct: 307 KELFDYLDKTYSIDVPECVVT--------------QEINKINQEIQDSAGTVQVDVKAEA 352
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+RV GI+L + +NI + ++++ S + + + +L Q + +
Sbjct: 353 MKRVKLGILLVKMSRHHNISINKDDVFSFINTYYSDYGINLNDVLRMLQSNKDFANYISG 412
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ EDKVI++I++ V+ + +T +L
Sbjct: 413 KVLEDKVINYIIRLVKKDKKVMTTQEL 439
>gi|257791676|ref|YP_003182282.1| trigger factor [Eggerthella lenta DSM 2243]
gi|325830615|ref|ZP_08164036.1| trigger factor [Eggerthella sp. HGA1]
gi|257475573|gb|ACV55893.1| trigger factor [Eggerthella lenta DSM 2243]
gi|325487361|gb|EGC89803.1| trigger factor [Eggerthella sp. HGA1]
Length = 501
Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats.
Identities = 75/449 (16%), Positives = 168/449 (37%), Gaps = 25/449 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KSI 62
+ E + ++ V + + + + +D +K N GFR GK P I + G +++
Sbjct: 10 KVEALEDNRTKVTVTVDAADIDARIKKTYKDFANKYNFPGFRKGKAPRPIIDNALGAEAV 69
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
+ D+++ P + D +P + L+E + + P
Sbjct: 70 RATVTDDVVNGTYPLAIDDCDLYPIAKPEFDETD--------LVEAGKPYTFSFTVTVKP 121
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS-- 180
+IEISS++ +++ + EID Q+ + ++ +FE +++ + +D +
Sbjct: 122 EIEISSYEPVEIELPAEGTTDAEIDEQIDALREHYYSFEDASAATKVKEDSYIDLAMKAT 181
Query: 181 -VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA--- 236
+ + +N + +G+ +E E LVGLK G P D I A
Sbjct: 182 DDKGEEIPSLTTENRPYGLGANLFPAEFDEQLVGLKKGQTATFTLDMPADPPIMLSALAG 241
Query: 237 -GKKVRLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVK 294
+K+ +K V + VN++ A FES +R ++ + ++ + +
Sbjct: 242 KTEKINFEVEVKVVKKKIVPEVNDEWAKEQMGFESVEDLRARIAESVTSQKADMMPRLKE 301
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYY 350
L ++ + DVPE+++E+ ++Q ++ S ++ +
Sbjct: 302 NACLYALAERVEGDVPEAMLEDAEASLIQDFFQQLQSQGMTFDVYLAQQGITPDQFKEDV 361
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A+ + L +E T EE+ + + L+ + L
Sbjct: 362 KKQAEDMSKQDLALDAWARHFGMEATAEEVTEEFVK----SGVEDPAALEAEWRSNGQLH 417
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFD 439
+R + K + I+ + + ++
Sbjct: 418 MVRQGVIRTKAVKDIMDKAVVTELDLSKK 446
>gi|327402365|ref|YP_004343203.1| trigger factor [Fluviicola taffensis DSM 16823]
gi|327317873|gb|AEA42365.1| trigger factor [Fluviicola taffensis DSM 16823]
Length = 450
Score = 155 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 71/471 (15%), Positives = 171/471 (36%), Gaps = 45/471 (9%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + L V + ++ R +A I GFRPGKVP+ I+ YGK
Sbjct: 1 MNVTRQEVNAETALLTVQVSPADYQGKVAASLDKYRKQAKIPGFRPGKVPMGLIQKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L+E +++++ + + + + P G E D +
Sbjct: 61 GVLAEEMNKLVSDALYAYVQENKLEILGNPIPKDGT----EVKGDFEKPEDFEFVYEIGY 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF----EVKETESEIGDKVTVD 176
P I++ + + ++D+K ID+Q+ ++ + EV +T+ + V ++
Sbjct: 117 SPAIDLKLTNKSKYDYVQVKIDDKLIDQQLDDLRRRYGKMTSTDEVADTDMILAQFVELN 176
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPE-------- 228
S+ + S +++F+ + + LVG K GD+ I
Sbjct: 177 EDGSIKEGGIMHSSTTSMEFVED-----KKAKKSLVGKKIGDKVTISATEITRGDSDKAA 231
Query: 229 --DHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSE 286
++LA +I ++ +N +L +L E + ++I +
Sbjct: 232 MLGVKPEELANHSDSYQMTINDIKRMELAELNQELFDKLFGEGAVSSEKELRERIATDLK 291
Query: 287 FLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED 346
+ R + + + P +L + +Q + + Q + DS
Sbjct: 292 NMFANDSDRLLTREVYRDLVDNTPINLPDTFLKRWIQLSNEQPITIEQIESDYDSYA--- 348
Query: 347 LQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPGHEKKMLDHF 402
+ + ++ G I + N+I++ E+ + Q ++ + +
Sbjct: 349 ---------KDLKWQLIQGHIFKANDIKLDNSEVIEFTKGLIANQFAQYGIPAPEDAELT 399
Query: 403 Q------KYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ + + + E K+ + +V++ +++++D+ + +++
Sbjct: 400 KQAAGALQNREEANRIYDMLAETKLTQYFKNTVKLNSKEISYDEFVEMAAK 450
>gi|269123537|ref|YP_003306114.1| trigger factor [Streptobacillus moniliformis DSM 12112]
gi|268314863|gb|ACZ01237.1| trigger factor [Streptobacillus moniliformis DSM 12112]
Length = 424
Score = 155 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 82/433 (18%), Positives = 170/433 (39%), Gaps = 19/433 (4%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ G + +++ + + GFR G VP I+ + I
Sbjct: 2 KLEKLAGSEVAFEILKEGQEYKTLRESILAKF-KNVKVDGFRKGHVPADVIEKTFKSEIR 60
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E I+EI+K ++ + R I E LK+ L + P+
Sbjct: 61 DELINEILKTEYTTLIREEKLRPVADLQIVSLEY----------DENKLKMNLKVAVFPE 110
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI-GDKVTVDYTVSVD 182
E+ + L + + V ++E++ ++ + + FE E E GD +++ VD
Sbjct: 111 FELPQYKGLDIKAEEVSVTDEEVENEINRMIQRAKKFEKTEREEAKLGDIAVINFEGFVD 170
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
V + ++ + +GS E +VG K G++ ++ FPE++ ++L GK+
Sbjct: 171 GVAFDGGKAEDHRLELGSKTFIDTFEEQIVGKKLGEEFDVNVKFPEEYHAENLKGKEAIF 230
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
+ + + +N++ A G +S ++ I + E + K + I++ IS
Sbjct: 231 KVKLNSLEEAIIPELNDEFAKASGSDSVEDLKNAIKGNILSNKEEQAKNKRLKTIVENIS 290
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKRRV 358
+ T +VP VE E N + + + + + E+ + + A++ V
Sbjct: 291 DATTMEVPTITVEQEINAQIDRFAQTLQMQGMNLETYLQMTGQTVEKMREDLRVSAEKGV 350
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN---ALAELRAP 415
+ +L I E IEV E E + L + + ++ +K ++ +
Sbjct: 351 KSSFILSKIAEVEGIEVKEAEFDAELQKIASMYGMTVDQLTAELEKTDGVNRFFGQINSQ 410
Query: 416 IFEDKVIDHILKS 428
+F KV D++L +
Sbjct: 411 LFFAKVNDYLLTN 423
>gi|218247706|ref|YP_002373077.1| trigger factor [Cyanothece sp. PCC 8801]
gi|257060957|ref|YP_003138845.1| trigger factor [Cyanothece sp. PCC 8802]
gi|226703996|sp|B7JW76|TIG_CYAP8 RecName: Full=Trigger factor; Short=TF
gi|218168184|gb|ACK66921.1| trigger factor [Cyanothece sp. PCC 8801]
gi|256591123|gb|ACV02010.1| trigger factor [Cyanothece sp. PCC 8802]
Length = 455
Score = 155 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 65/473 (13%), Positives = 176/473 (37%), Gaps = 31/473 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + L++ I + ++ ++ + ANI GFR GKVP + G
Sbjct: 1 MKVTQEKLPDSQIGLEIEISAEASKKAYETKVNTLARTANIPGFRKGKVPRQILLQRIGT 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I + T+ E+I++ + + + + + D + L + D
Sbjct: 61 EYIKATTLQELIEDSLKAAIKQESLESIGDFELKSK---FDELVQQFKPGEPLTFSAAID 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYT 178
+ P + + + L V + + ++++ E + ++ ++E+GD VDY
Sbjct: 118 VPPTVTLGDYQSLSVKAEETVYNPEKLENWFKERQEQQATLVPVEDRKAEMGDVAIVDYE 177
Query: 179 VSV--------DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
+ + ++ + + E +VG++ + +EI FP D+
Sbjct: 178 GYFAPEEGEETERKPIPGVQGQDFRVDLTEGRFIQGMVEGIVGMQPEETQEITVTFPSDY 237
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLV 289
+DLAG+ ++KE+ + +++D A F + + +R ++ + ++
Sbjct: 238 PREDLAGQVAIFKITVKELKAKELPELDDDFAEEVSEFATIAELRESLEKQFTEEAQEAT 297
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED--L 347
++ + ++ + D+P +L+E+E +L + +M + + +
Sbjct: 298 KKSIHDAMITQLLEICPVDLPNTLIEDEVTQVLTQTAMQMEQMGIDIRQLFVKENIPKLR 357
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A R+ ++L I + +I ++ + + + +
Sbjct: 358 ENARPDAISRLKQSLILQEIAKVESITPEASLVEERINKIKEQLSERDVDFDK------- 410
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKV 460
+ + + +++ + + + +L + E +S +
Sbjct: 411 LEQMVTEELTMEAILNWLQEKATV--------ELVPEGTLKPAEDQEAESQEE 455
>gi|294508704|ref|YP_003572763.1| Trigger factor [Salinibacter ruber M8]
gi|294345033|emb|CBH25811.1| Trigger factor [Salinibacter ruber M8]
Length = 511
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/461 (17%), Positives = 183/461 (39%), Gaps = 32/461 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ ELD+ ++ L E + R +++GFR GKVPL +K ++G+
Sbjct: 50 MDTTLSKASPVEYELDLHATADELEPKLKEALNAQRKNMDVQGFRKGKVPLGLVKKMHGE 109
Query: 61 SILSETIDEIIKEIVPEILSKRD-ERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+I ++ ++E E + + D +P++ E DL+ L +
Sbjct: 110 AIGYRVAEQFVQEAFEEEVEETDAIEPLGQPTL---------VDLDYELDADLQATLRFG 160
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV---AFEVKETESEIGDKVTVD 176
+ P++E+ +++T E+ E++++ ++ + K E + E + +
Sbjct: 161 VRPEVELEDLSSVEITMLDPEITEEDVEDEIERLRKEEADLLPLEEEAAEDTDYVNIDLQ 220
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ + +++ F + L E E LVG K GD +E
Sbjct: 221 RIDPDTDTPIIGDKDEDLTFFLDDDRLKEELREALVGQKAGDTFRVELPQEHPAHEHAGH 280
Query: 237 GKKVR---------LNFSIKEVFSPLPVVVNNDLAV---RLGFESESAMRGLCSQKIKQH 284
G ++ +V ++ + + A R +++++
Sbjct: 281 GHPHEHEGDGEDRLYEVTVNDVKRRDLPPLDEEFVRRVTEGELDDLEAFRNDIRERLQEA 340
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE 344
+ R+ + +++D + + VPES++E + +++V E N D +E
Sbjct: 341 WDERAREMAQGEVIDKMLELHPVPVPESVIEGYLDSFVKQVEEE----NDGELPEDFDEE 396
Query: 345 EDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPG-HEKKMLDHFQ 403
Q A+ + ++ I E+ ++EV+ EE+Q+ +Q G +++ +Q
Sbjct: 397 HFRQRNRRDAEDQGRWMLIRDQIVEEQDLEVSNEEIQTFFAEQSGGEEQVTAQQIEQFYQ 456
Query: 404 KYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
P + ++ I DKV D + + + + + ++ +
Sbjct: 457 TMPQMMEKVEQQILSDKVYDFLFDRLDVESK--SREEFEEE 495
>gi|268680773|ref|YP_003305204.1| trigger factor [Sulfurospirillum deleyianum DSM 6946]
gi|268618804|gb|ACZ13169.1| trigger factor [Sulfurospirillum deleyianum DSM 6946]
Length = 431
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 83/440 (18%), Positives = 179/440 (40%), Gaps = 23/440 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ + ++ I L + I S + GFR GKVP +K+ YGK
Sbjct: 1 MQIKVNRTNSANAAVEATISPALLQKKEEKLITSAASNMKVDGFRKGKVPAHIVKARYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + E ++++ + LS+ + PS + E E L+L +
Sbjct: 61 QLKDDAQTEALRDLYTQALSELNVTAELVVGEPSFSKFE----------EKDGGLELVMK 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTV 175
P + + + + +V +KEI ++ + + E + + GD +
Sbjct: 111 LSFKPSVNVEGYKECIPEYKTPKVTKKEISERLEKTLALVADLKTVEEKRAVKSGDFAVI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +D V E + +GS + +VG+K G K+IE FPE++ K+L
Sbjct: 171 DFEGFLDGVAFEGGKAEKYTLEIGSGSFIPGFEDGVVGMKAGKSKDIEVAFPENYGNKEL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLC------SQKIKQHSEFLV 289
AGK V ++ E+ ++ ++ ++ + L
Sbjct: 231 AGKPVIFKVTLHEIKVKDVPETPSEEMIQKLLPGVENASLEVLEEQIETEIRNEKLAKLF 290
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQ 348
+++K Q ++ + K D+PE++V+ E + ++ V +M A + +E +
Sbjct: 291 NEELKPQFVENVLAKVALDLPENIVDQEIDLQMRSVFGKMDEATIKEYSENPEKIKEKRE 350
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ A++ V ++ + + NI V ++E+ +Y + + + K+ L+ +QK
Sbjct: 351 EFRNDAEKSVKLTFIVDELARQENIMVNDQEVLQMIYFEAMQQGANPKEYLEFYQK-QGV 409
Query: 409 LAELRAPIFEDKVIDHILKS 428
L ++ + E+++ + +
Sbjct: 410 LPAIKMSMIEERLFNQLFTK 429
>gi|108563205|ref|YP_627521.1| trigger factor [Helicobacter pylori HPAG1]
gi|118574071|sp|Q1CT75|TIG_HELPH RecName: Full=Trigger factor; Short=TF
gi|107836978|gb|ABF84847.1| trigger factor [Helicobacter pylori HPAG1]
Length = 451
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 86/439 (19%), Positives = 201/439 (45%), Gaps = 22/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L + L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKLSIENLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++I+ ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKINERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFNLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSGYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLHQIQAREALEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKS 428
A ++ + ED+V+ ++L
Sbjct: 410 AAVKMAMIEDRVLAYLLDK 428
>gi|325295218|ref|YP_004281732.1| Trigger factor [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065666|gb|ADY73673.1| Trigger factor [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 437
Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats.
Identities = 78/439 (17%), Positives = 187/439 (42%), Gaps = 9/439 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L NE ++I+ A I GFRPGK P++ IK Y +
Sbjct: 1 MAYEVEKRNEVLYAVKISAEPTELEKEVNEICKEIKKTAKIPGFRPGKAPINIIKKYYEE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + + E + E + + + + + + E +
Sbjct: 61 TIRDALLRNFVPEKLSEAIKENNLQVISELVVEALDFSLK------ENKFSTTVLFEVKP 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+++ + ++ T+ I E+ ++++++ + + F + E+ GD V ++Y
Sbjct: 115 AIELKPEDYKGIKATKTIREITDEDVEKVIEGLRNQQAQFNEVDREAREGDLVDIEYETI 174
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK-DLAGKK 239
V E+ K +V I+G L+ E + ++G K G++ E+ PED I + AGK+
Sbjct: 175 VKGDEKEEPQKGSVSVILGQNQLWPEIEKEVLGKKAGEEGEVSFTAPEDEKIYGEAAGKE 234
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + F I V + +N++ A + GFE+ M+ + +++ + +++V+ QI+D
Sbjct: 235 ITVKFKISAVKEKILPELNDEFAKKFGFENLEDMKKKIRENLEKSEKEREQEEVEDQIVD 294
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ K VP+S+++ E + +++ + + ++ A++ V
Sbjct: 295 ELLKKVNIPVPQSMLDLEIRAQAENQLAKLAQFGVDVRQ--MNPQTLVEMVRPTAEKTVK 352
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
++L + E +EVT+E++ + + + + + L ++ +
Sbjct: 353 VKLLLEKVAELEGLEVTDEDLDAEIQKLAEAAFNGDYVQARQSLEERGLLGMIKQDVLRQ 412
Query: 420 KVIDHILKSVQIVDRKVTF 438
K +D +++ ++ +
Sbjct: 413 KALDRLIELAEVEEVPAEK 431
>gi|154175478|ref|YP_001407436.1| trigger factor [Campylobacter curvus 525.92]
gi|166229029|sp|A7GW44|TIG_CAMC5 RecName: Full=Trigger factor; Short=TF
gi|112803265|gb|EAU00609.1| trigger factor [Campylobacter curvus 525.92]
Length = 441
Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats.
Identities = 74/433 (17%), Positives = 171/433 (39%), Gaps = 19/433 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ K + + E+ + S+ + S + + + GFR G VP++ + Y K
Sbjct: 1 MEINAKPIDSVNVEVSAKVKSDEIKASVEKLAKKAAKTMKVDGFRQGHVPVAIVLKRYEK 60
Query: 61 SILSETIDEIIKEIVPEILS---KRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ S+ +I+++++ E + K+ + P I+ + + D +D++L S
Sbjct: 61 ELTSDAEQDILRDVLNEAIKKSGKKSDELIGEPLISKFDRKDD--------GIDVELTAS 112
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+ +E + + + + + + + + GD D+
Sbjct: 113 FKPSVSVEGYEALIPEFSTPRVLKKDIDEKKNELLKMFAPLEKVEGKRALKAGDFAKFDF 172
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD E +N +GS + ++GLKTGD K+IE FP ++ LAG
Sbjct: 173 EGFVDGEAFEGGKAENYLLEIGSGQFIPGFEDGMIGLKTGDSKDIEVTFPAEYGAAHLAG 232
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR------Q 291
K I E+ ++ ++ +E ++ + +
Sbjct: 233 KPAVFKVKINEIQERKIPETLDENTLKAIMPNEEKPSEELLEERIKDQIRQDKIFKLISD 292
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQYY 350
++K + + + K+ FD P+++VE E + + S + K ++ + Y
Sbjct: 293 ELKPKFAEAVVEKFKFDTPKNIVEQEIDMQFRNAWNGFSEDERKKFRDDKDAVAKKRDEY 352
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A++ V ++ + ++V+++E+ A+Y + R K L+ ++ L
Sbjct: 353 RDDAEKSVRLTFIIDELARVRGVKVSDQEVVQAVYFEAYRSGRDPKAHLEMYR-NQGMLP 411
Query: 411 ELRAPIFEDKVID 423
++ + E+K+ +
Sbjct: 412 AIKMSMIEEKLFN 424
>gi|308063421|gb|ADO05308.1| trigger factor [Helicobacter pylori Sat464]
Length = 451
Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats.
Identities = 89/460 (19%), Positives = 212/460 (46%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L + L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKLSVENLEKRYDKIAQKIAPKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ L + P+ T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNALKELGIENKDLIGSPNFTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP ++ + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSEYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLHQIQAREALEINDELAKIVLANEENAALKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|224419237|ref|ZP_03657243.1| trigger factor [Helicobacter canadensis MIT 98-5491]
gi|253826955|ref|ZP_04869840.1| trigger factor [Helicobacter canadensis MIT 98-5491]
gi|313142739|ref|ZP_07804932.1| trigger factor [Helicobacter canadensis MIT 98-5491]
gi|253510361|gb|EES89020.1| trigger factor [Helicobacter canadensis MIT 98-5491]
gi|313131770|gb|EFR49387.1| trigger factor [Helicobacter canadensis MIT 98-5491]
Length = 434
Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats.
Identities = 90/437 (20%), Positives = 190/437 (43%), Gaps = 23/437 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
I + L ++ + I GFR GK+P + IKS YGK +
Sbjct: 6 KVNKINSANANAQATIALSELDKKIDQVTKAAGKNLKIDGFRKGKIPAAVIKSRYGKQLE 65
Query: 64 SETIDEIIKEIVPEILSKRDERA---AMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E +++++ EIL + + + P IT E + + IE +
Sbjct: 66 TDAQRECVQDLLQEILKELNIKPNALIGDPRITKFEKKENGIELEIE----------LSL 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDY 177
P I ++ + I EV E+EI++++ EIA E + + G+ +D+
Sbjct: 116 APDIPLNDVESCIPEVKIPEVTEEEINQRLEEIADARAPLVGIEDARRKLKDGEYAKIDF 175
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D E +N +GS + L+G+K +++EI+ FPE++ +LAG
Sbjct: 176 EGFIDGKPFEGGKAENYLLKIGSKSFIEGFEDQLIGMKKDEEREIQVTFPENYHAANLAG 235
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVRQK 292
K + E+ + + ++++ A L E + A L +KIK + L +
Sbjct: 236 KPATFKVKLNEIQTKGKIEIDDNFAKTLLPEEKEANVALLKEKIKDQIAAEKKQALYNNE 295
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEM-SSANQKSQNVDSIDEEDLQYYH 351
+K +++ + FD+P +VE E + +L+ ++ +K + +
Sbjct: 296 LKAVLIENLHKAIDFDLPNLIVEQEMDLLLKNEFAKLPKEEQEKLAKDTEALKAKREEQR 355
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++ V + ++ I +++NI++ E E+ + +Y + K +L+++ K N +
Sbjct: 356 DAAQKSVKSTFIIDAIAKRDNIDINENEILNTIYYEAMAMRQDPKMVLEYY-KNNNLIPA 414
Query: 412 LRAPIFEDKVIDHILKS 428
++ + ED+++ ++L
Sbjct: 415 IKMAMLEDRILTNLLNK 431
>gi|119953392|ref|YP_945601.1| trigger factor [Borrelia turicatae 91E135]
gi|254788989|sp|A1R039|TIG_BORT9 RecName: Full=Trigger factor; Short=TF
gi|119862163|gb|AAX17931.1| trigger factor, ppiase [Borrelia turicatae 91E135]
Length = 448
Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats.
Identities = 87/443 (19%), Positives = 191/443 (43%), Gaps = 10/443 (2%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E + I + +NE ++D S+ +KGFR GKVP S I+ Y +I +
Sbjct: 7 VKLIPGSKVEAVIRISKKFVKSKYNEILQDYSSRLKVKGFRIGKVPFSIIEGKYSDNIRA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
TI+++I + + E + I + I+ + D + + Y+ P+
Sbjct: 67 LTIEKLIHKSLEEFFKSATYKPLGYAVPKILD-----EKLEIDFSKDFEFTVVYEAYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY-TVSVDN 183
E+ +++V V + +++ ++ + N + + G V VD+ +
Sbjct: 122 ELPDISNVEVEIPEVFVSDSDVEEELKLLQLENAIVVEDSGDVKSGSIVRVDFVELDDSL 181
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
+ +++ F VG ++ + ++G+K ++K +E+ + D+ +LA RL
Sbjct: 182 SEILTTKRQDFVFTVGESNNYYGFDNDIIGMKKDEEKIVEKNYGMDYKFSELANSFKRLK 241
Query: 244 FSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
S+K++ +++D A + F + ++ + + + + ++L I
Sbjct: 242 ISLKDIKRRDIPKLDDDFAKDIKDSFNTLEDLKEHIRENMLRLVKERSESLKLSKLLSDI 301
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ K ++P S+ E E+ +L + + ++ N + E + +++ +
Sbjct: 302 AEKLNIEIPSSMFEAEFKNVLNEFSHQNKINLEQLSNSSTGLEGINDVFKENVLKKLKSK 361
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
++ I + + EVT+ +++ L +Q + +Q+ N L L+ I KV
Sbjct: 362 LIFQKIVDNDLTEVTDSDLEDELVKQAEDAKMKLADIKKFYQE-KNLLEILKDEIKRQKV 420
Query: 422 IDHILKSVQ-IVDRKVTFDQLFD 443
D ILK+V+ I +KV F +
Sbjct: 421 KDKILKNVKEINPKKVAFRDFIN 443
>gi|307722033|ref|YP_003893173.1| trigger factor [Sulfurimonas autotrophica DSM 16294]
gi|306980126|gb|ADN10161.1| trigger factor [Sulfurimonas autotrophica DSM 16294]
Length = 432
Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats.
Identities = 92/439 (20%), Positives = 196/439 (44%), Gaps = 22/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ G +++ I + + + + + + AN++GFR GKVP++ IK YG+
Sbjct: 1 MEIKSNKINGANAQIEATISIDEVNANIEKIAKQLSKTANVQGFRKGKVPVAIIKKQYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
++ + E ++E++ + L + P+I+ + D I+
Sbjct: 61 KLVEDAEAEALREVLAKGLEELSIDNASLIGEPTISKFDKSDDKIEVAIK---------- 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTV 175
+ PQI+++ L EV +KE++ ++ EIA+N + + + GD +
Sbjct: 111 VAMRPQIDLADVKSLVPDFKKPEVTDKEVEERIKEIAENQAPLVDIKRNRKMKEGDTAVI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ + E + +N + +GS + L+G+K ++ I FPE++ L
Sbjct: 171 DFEGFIGGEAFEGGAAENFELKLGSGQFIPGFEDQLIGVKRDEEVTINVTFPENYGSDTL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFL-----VR 290
AGK + V VV++++LA +L E A +++K+ E
Sbjct: 231 AGKDAEFKVKVNGVKVKDDVVIDDELAKKLLPGEEDATLDKLKEEVKKALEQEKLTKLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQY 349
+++K ++L+ + K FD+PE +V+ E + + K +MS + + EE +
Sbjct: 291 EELKPKLLEILVEKIDFDLPEFVVDQEIDMAVNKKASQMSEDEIKELRENPEKLEELRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ ++V E+E+ +Y + + +K +H+ K L
Sbjct: 351 FRDDAMKSVKATFIIDALAQELGVKVEEQEVMQTIYFEAMQTGQDPQKAYEHY-KDAGYL 409
Query: 410 AELRAPIFEDKVIDHILKS 428
++ + EDKV+ +L
Sbjct: 410 PAIQMSMVEDKVLTTLLNE 428
>gi|213962578|ref|ZP_03390840.1| trigger factor [Capnocytophaga sputigena Capno]
gi|213954904|gb|EEB66224.1| trigger factor [Capnocytophaga sputigena Capno]
Length = 442
Score = 154 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 66/453 (14%), Positives = 159/453 (35%), Gaps = 26/453 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + + I N D + + D R A+I GFR G VP IK YGK
Sbjct: 1 MNINREQVDALNAVIKIAIEKNDYADKVEKVLNDYRKTASIPGFRKGHVPAGMIKRQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + I+ ++++ + + ++ P + + D +
Sbjct: 61 AVKFDEINRVLQDSLYKYINDEKLNILGNPLPKEKQ-------DINIDADDFTFEFEIGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P IE++ + + EV + +ID+Q+ I K K
Sbjct: 114 TPTIEVNLKPKKAIVRYEIEVADDQIDKQVERIQKQFGKLVAKGEVINDDSL-------E 166
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ ++ + Q +L + +G K GDQ +++ +
Sbjct: 167 ITGTFFNEEKSIDSQATFTLEELSDAARKEFIGKKIGDQFQLQTKGL--FKDVHSLMHYL 224
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++ ++ R G + + +E +R K+K
Sbjct: 225 KVSHDEAHHLEVEVTFTLEEVNERQGAALDQELFDKLFPDGSVTTEQQLRDKIKEGAQHQ 284
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + ++ + + + ++ + E++ + + +++ +
Sbjct: 285 YNEQADQHFLNTVTDYLVDNTKFDLPETFLKKWLRTAGEKELTEQEAEEEYSRSEKGLRY 344
Query: 361 GIVLGTIGEKNNIEVTEEEMQ----SALYQQLGRFPGHEKK------MLDHFQKYPNALA 410
++ G + E+NN+ EE++ + QL ++ ++D + +
Sbjct: 345 QLIEGKVLEENNLHPKFEELKDFARDYIKGQLAQYGMPTDDDSYVDGIVDRVLQNREEVQ 404
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
++ + K+ID ++V+ +KVTFD+
Sbjct: 405 RIQQQLVFKKLIDFYKENVKTEVKKVTFDEFVK 437
>gi|328955400|ref|YP_004372733.1| trigger factor [Coriobacterium glomerans PW2]
gi|328455724|gb|AEB06918.1| trigger factor [Coriobacterium glomerans PW2]
Length = 452
Score = 154 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 82/474 (17%), Positives = 175/474 (36%), Gaps = 29/474 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + + K +V IP+ + + + D K GFR GK P I ++ G
Sbjct: 1 MNITASDVKDGKLAAEVTIPAVDVDAAIRKAYRDAAHKYRFPGFRAGKAPRPVIDNMLGA 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++L++ ++++ P++L++ D S + D D +++
Sbjct: 61 QAVLAQATNDLVGATEPKVLNELDIVPVKEASYDDLDIVKD--------RQDFSYNVTFP 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P+ E+SS+D +++ EV EID Q+ + + F+ E D
Sbjct: 113 LRPEAELSSYDPVEIEMPPEEVTAAEIDAQIDMLVGYHATFKEIEDRGIADDDFVTVDIK 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ E + + +GS +L S E L+G GD KEI E + +
Sbjct: 173 DIHGG--ESLAGQGRMIAMGSGNLPSAFDEGLIGSGVGDTKEISWTPEETDAE------E 224
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +IK + + ++ A GF+ AMR +++Q + +++ +
Sbjct: 225 ASVEVTIKGIRHRELPELTDEFAKTSFGFDGVDAMRDAVKLELEQDKSSKLPGLKEQRSV 284
Query: 299 DYISNK-----YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
++ + D ++ LQ + + + ++ E+ + H
Sbjct: 285 SALAERLELTEMDKDYESTIFSELGQNFLQNLSQRGMTLDAWLKSSQITSEQFIADLHHQ 344
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + L + K +IEV++E++ + R + L +R
Sbjct: 345 ADDVARESLALDALARKLDIEVSDEDVDAEFE----RAGVDDPAASKESFIAEGRLPAVR 400
Query: 414 APIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEE 467
I K I+ ++ S ++ V + + + E S+ ++E
Sbjct: 401 DSIRRSKAIEWLVGSARVS--VVDEAARRAEADDDADEPSEPSSASDAGEGADE 452
>gi|323342868|ref|ZP_08083100.1| trigger factor [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463980|gb|EFY09174.1| trigger factor [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 423
Score = 154 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 79/435 (18%), Positives = 178/435 (40%), Gaps = 23/435 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ +E L V + + ++ +E+ I+GFR G+ P + +
Sbjct: 1 MKSTWTLNENSTGLLTVEVEEKAWKKAQDKTLENAIKNVEIQGFRKGQAPKELARKQVNE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I+ + ++ I E + ++ P + I D L L+
Sbjct: 61 QMIMMDAVNAIANEAFVAGMVEQKIEPVATPELDIEAMTEDA----------LTLKFIVT 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++E+ + L + + V K+I+ ++ ++ + ++KE E GD V +D+
Sbjct: 111 VKPEVELGEYKGLDIKRKRITVSAKDIEAELVKLQEEQAELQLKEGAVENGDTVVMDFEG 170
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D V E +N +GS E ++G+ + D+K+++ FPE++ ++DLAG+
Sbjct: 171 FKDGVAFEGGKGENYTLEIGSNSFIPGFEEAMIGMVSEDEKDLDITFPEEYHVEDLAGQP 230
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV---RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V + EV + + +N++ S A++ + +K E +V +
Sbjct: 231 VVFKVKLHEVKTKVLPELNDEFVELLDDEEITSLDALKDSIKKNLKAQREQAEEDRVNEE 290
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKS----QNVDSIDEEDLQYYHM 352
+++ ISN ++P +++E E N + + ++ Q + +E+ +
Sbjct: 291 LVETISNNAKINIPAAMIEEELNQMFNEFNQRLAQQGMNFDLYSQILGQSEEDVKEQMRE 350
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++RV T + L I E ++V +EE++ + ++ + +
Sbjct: 351 DAEKRVRTRLTLEKIAEVEGLKVEDEEIEKEFTTISEAYGMELDQVKNLVSPD-----AI 405
Query: 413 RAPIFEDKVIDHILK 427
I K ++ + +
Sbjct: 406 GYDILLRKAMELVQE 420
>gi|308184579|ref|YP_003928712.1| trigger factor [Helicobacter pylori SJM180]
gi|308060499|gb|ADO02395.1| trigger factor [Helicobacter pylori SJM180]
Length = 451
Score = 154 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 90/460 (19%), Positives = 212/460 (46%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L + L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKLSVEDLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ L K P+ T E + ++
Sbjct: 61 QIDQDAQEEMIQEVLKNALKKLGIETKDLIGSPNFTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++I+ ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEVPNEEKINERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DNV E +N I+GS + + + L+G++ ++KE FP + + L
Sbjct: 171 DFEGFIDNVPFEGGKAENFSLILGSKQMLEDFEKALLGMQASEEKEFPLTFPSGYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ ++++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLRQIQAREALEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKILFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V V+ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFVIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPESLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|295099544|emb|CBK88633.1| trigger factor [Eubacterium cylindroides T2-87]
Length = 425
Score = 154 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 94/440 (21%), Positives = 196/440 (44%), Gaps = 25/440 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M +E L+V + + + N+ ++ I+S+ NIKGFRPG+VP + IK K
Sbjct: 1 MTSNWTLNEKSTGVLEVTVEGDAWKKAQNKALKKIKSRINIKGFRPGQVPEALIKKQISK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ +E +EI E + + + RP++ I E D + + +
Sbjct: 61 EALYAEAAEEIANEALVHGIDENKLELVARPTLDIKEANDD----------KVVMAFNCV 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDY 177
+ P++ + + L + ++ EV E++I+ ++ I + ++ E+++ D+VT+D+
Sbjct: 111 VSPEVTLGDYKGLDIHKEEVEVTEEDINAEVERIQNRYADWVIREEDEEAQLKDQVTIDF 170
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
D V E S +N +GS E LVG+KTGDQK++ FPED+ KDLAG
Sbjct: 171 VGEKDGVAFEGGSGENYPLELGSGTFIPGFEEQLVGVKTGDQKDVVVTFPEDYQAKDLAG 230
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
++ ++ ++ N++L + G E+ + + +K E
Sbjct: 231 QEATFKVTVHDIKYKELPEANDELVQKLKMDGVETLEQFKEKKADDLKAQKEKSAEDAFV 290
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYY 350
+++ + T ++PE ++E++ + + M + + V + + +
Sbjct: 291 NALIEKVCENATVEIPEVMIESQIDREYKNFENRMMQSGFTAKQYLEAVGQTEAQLRETM 350
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A++ V +VL I + NI + +E +++ Q + +K+ P
Sbjct: 351 RPSAEQNVKASLVLDAIVKAENIVIDDEAVENEFKQMSETYGMDVEKIKGII--NPE--- 405
Query: 411 ELRAPIFEDKVIDHILKSVQ 430
++ + + K ++ I +SV+
Sbjct: 406 NVKYDLAQQKALELIKESVK 425
>gi|332291468|ref|YP_004430077.1| trigger factor [Krokinobacter diaphorus 4H-3-7-5]
gi|332169554|gb|AEE18809.1| trigger factor [Krokinobacter diaphorus 4H-3-7-5]
Length = 440
Score = 154 bits (387), Expect = 5e-35, Method: Composition-based stats.
Identities = 68/454 (14%), Positives = 163/454 (35%), Gaps = 27/454 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + L + V I + +++ R ANI GFR G VP+ IK YG
Sbjct: 1 MNITKEQIDDLNAVVKVEIVKEDYNEKVESILKNYRKTANIPGFRKGHVPMGMIKKQYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + +++I++E + + L + P G T D +
Sbjct: 61 AVRVDEVNKILQEALGKFLQEEKLDVLGNP-------LPKNQEGFNWDTDDYNFEFELGM 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +++ VT +VD+K +D Q+ I K + ++ + T +
Sbjct: 114 APKFDVNLTPKKAVTSYKIKVDDKMVDSQVTTIRKQYGTLVSQTEVAK-----NSEITGT 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N ++ + + + LVG K GD ++ A +
Sbjct: 169 FVNEEAGIDNQATFEIEQVKG---KKNVDALVGAKPGDVITLKTKSLFSEPGTYQA--AL 223
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++ + + + R + + + K S +++K+K
Sbjct: 224 KISEDQAKEMNAELTFTLTETNKREQADLDQELFDKLFGKDVVKSTTELKEKIKEDGERQ 283
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + E + + E + +S + EE+ + +++ +
Sbjct: 284 FVQQSDQQLMNDVTERLIDETKFDLPSEFLARWIQSSGEKPMTEEEAKEEFTRSEKGLRW 343
Query: 361 GIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPG------HEKKMLDHFQKYPNALA 410
++ G + N ++VT EE++ + Q+ ++ + + +
Sbjct: 344 QLIEGKVVTDNKLQVTFEELKDYAKDMIKSQMMQYGQMNPEDKELEDIAARILGNQEEVK 403
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
L + K++ ++V++ +++VTFD+
Sbjct: 404 RLSEQLMNVKMLTFFKENVKLKEKEVTFDEFVKE 437
>gi|157165093|ref|YP_001465992.1| trigger factor [Campylobacter concisus 13826]
gi|166229028|sp|A7ZB34|TIG_CAMC1 RecName: Full=Trigger factor; Short=TF
gi|112801784|gb|EAT99128.1| trigger factor [Campylobacter concisus 13826]
Length = 443
Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats.
Identities = 76/439 (17%), Positives = 179/439 (40%), Gaps = 23/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ K + I ++ + S + + + GFR G VP++ + Y K
Sbjct: 1 MEIKIKALNSVNTLASTTISADAIKSSVEKLAKKAAKTMKVDGFRQGHVPVAVVLKRYEK 60
Query: 61 SILSETIDEIIKEIVPEILS---KRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ ++ ++++++V E + K+++ P ++ + + D + +
Sbjct: 61 ELTNDAEQDVLRDVVEEAIKKAGKKNDDLIGEPIVSKFDRKDDKIDVEL----------T 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTV 175
P +++S ++ L V +K+ID + AE+ K E + + ++GD
Sbjct: 111 VSFKPSVDVSGYESLIPEFSNPRVLKKDIDEKKAELLKMIAPLEKIDGKRGLKVGDFAKF 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ VD V + +N +GS + +VG+K G +K+IE FPE++ +L
Sbjct: 171 DFEGFVDGVAFDGGKAENYVLEIGSNQFIPGFEDGMVGMKVGSEKDIEVKFPENYGAANL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV------ 289
AGK + E+ ++ +++ +E ++ +
Sbjct: 231 AGKDAVFKIKLHEIQERKIPEKLDEEMLKMVLPNEENPTEELLEERIKEQIRQEKIYKLI 290
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQ 348
+++K + + K+ FDVP+++VE E + + + + K + +
Sbjct: 291 NEELKPKFAEAAVEKFKFDVPKNIVEQEIDMQFRNAWSSFTPDDMKKFREDKDALAKKRD 350
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
Y A+ V ++ + ++V+++E+ A+Y + R K L+ ++
Sbjct: 351 EYRKDAENSVRLTFIIDELARVRGVKVSDQEVVQAIYFEAYRSGQDPKAHLEMYR-NQGM 409
Query: 409 LAELRAPIFEDKVIDHILK 427
L ++ + E+K+ +
Sbjct: 410 LPAIKMSMIEEKLFSELFN 428
>gi|332882824|ref|ZP_08450435.1| trigger factor [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679326|gb|EGJ52312.1| trigger factor [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 441
Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats.
Identities = 71/455 (15%), Positives = 164/455 (36%), Gaps = 27/455 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + + I + ++ + + R AN+ GFR G VP+ I+ +GK
Sbjct: 1 MNISREQKDALNAVITIDIVKSDYAENVEKTLNRYRKTANVPGFRKGHVPMGMIQRQFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + I+EI + E + K P + + + + D + + +
Sbjct: 61 AIKFDEINEITNRSLNEYIYKEKIGMLGNPLPIVKDIDIEA--------DDFQFQFEIGL 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P E++ + + EVDE +ID+Q+ I K K + D
Sbjct: 113 APTFEVNLKPAEGILRYEIEVDEPQIDKQIERIQKQFGKLVSKGEVLDSEDI-------E 165
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ ++ Q DL E + +G K GDQ +++ + + + +
Sbjct: 166 LTGTFFNEEKNIESQATFKLTDLSPEVRKTFIGKKVGDQFQLQTKGLFEDAHSLM--HYL 223
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++ ++ R ++ + +E +R K+K
Sbjct: 224 KVSHDEAHHLDIEVTFTLEEINEREKAALDADLFSKLFPDGSVTTEEQLRAKIKEGAELQ 283
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + ++ + + + ++ + E++ + ++R +
Sbjct: 284 FNEQADQHFLNTVTDYLVDNTHFDLPAAFLKKWLRTAGEKELTEQEANEEYERSERGLRY 343
Query: 361 GIVLGTIGEKNNIEVTEEEMQ----SALYQQLGRFPG------HEKKMLDHFQKYPNALA 410
++ I NN++ T EE++ + QL ++ +LD K +
Sbjct: 344 QLIESKIMNDNNLQPTNEEIKEFGREYIKAQLLQYGMPADDDAQVDSILDRILKNHEEVQ 403
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ + K+I ++ I +KVTFD+ +
Sbjct: 404 RIQQQVVFKKLIAFYKENAAINTKKVTFDEFIKLA 438
>gi|149196345|ref|ZP_01873400.1| trigger factor [Lentisphaera araneosa HTCC2155]
gi|149140606|gb|EDM29004.1| trigger factor [Lentisphaera araneosa HTCC2155]
Length = 445
Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats.
Identities = 87/443 (19%), Positives = 172/443 (38%), Gaps = 27/443 (6%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
++EL+V P+ +T FN + I +A GFR GKVP + I YG+ I
Sbjct: 8 SINELSACRKELEVNTPAQEVTQLFNNVCKQIGQQAKFPGFRNGKVPRTLILQKYGEQIK 67
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E ++++ + V + A D+ + D +++ DI P
Sbjct: 68 KEISEKLVSKAVDQARESEKFEIAG---------YLDVADFTPKYNEDCAFKITLDIYPT 118
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV--TVDYTVSV 181
I + + ++V + DE ++ + E+A EV + +E D V +
Sbjct: 119 ITLPDYKSVKVELEEYVEDEAKVKESLEEMAARFSTMEVVDRPAEKEDFVKSNFSTDLEA 178
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
+ + ++ + TE L G GD+ FPED +LAGK V
Sbjct: 179 TEATKDVLAGEDRWIPLTENGFIPGATEALSGKSKGDKVTWTADFPEDFHNAELAGKSVE 238
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
I EV +++++AV+ G + + + + +K E R + + +I+ +
Sbjct: 239 YTADIIEVHGRNAPELSDEIAVQAGAKDLADIEEKIKESLKSQFENKQRSEKRDEIVAQL 298
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFE---------------MSSANQKSQNVDSIDEED 346
+ D+P+ L+E E + + + E S+ + +
Sbjct: 299 LEGFDCDLPQHLLEQETHRQVHTIMAEEGIEAPEQCGHNDSDEKHDCCPSEEKTAAETAT 358
Query: 347 LQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYP 406
+ A + + T ++L + ++ +E+ + E+Q LY + + + Q+
Sbjct: 359 QEKALAAATKDLKTRMILREVAKEEKVELNQYEVQMQLYSMAQHYNMSVEDLTKQLQET- 417
Query: 407 NALAELRAPIFEDKVIDHILKSV 429
N+L E + DK +D I+
Sbjct: 418 NSLHEFTDHVLMDKTLDKIVDIA 440
>gi|225010440|ref|ZP_03700911.1| trigger factor domain protein [Flavobacteria bacterium MS024-3C]
gi|225005269|gb|EEG43220.1| trigger factor domain protein [Flavobacteria bacterium MS024-3C]
Length = 442
Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats.
Identities = 70/456 (15%), Positives = 170/456 (37%), Gaps = 30/456 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ +K + L E+++ + + + D + KANI GFR G+VP+ IK YGK
Sbjct: 1 MKITKKQLDTLNAEINITLDQADFQPKVDTILLDYKKKANIPGFRKGQVPMGMIKKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L E ++++++E + L++ P + D + L +
Sbjct: 61 SVLVEEVNKLLQEKLNSYLTEEKLSILGNPLPKVLSETFDWNADT------LSFDFELGL 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV--TVDYT 178
P+ E+S VT E D+K + Q+ I K ++ + +
Sbjct: 115 SPEFEVSLKTKKSVTNYKVEADKKMVADQVLSIRKQYGKISPEKAVTASSEITGLFFSEE 174
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + + + S I + K +++ +
Sbjct: 175 AGIDKKTTITLDQLKAKKAITSLQGAEVGASISLDTKGLFKEDAAVAGAFGLEAAEAKDL 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
K + F+I+E+ P ++ +L +L + QKIK+ +E Q+ +++L
Sbjct: 235 KTTVVFTIEEINERTPAALDQELFDKLFGKDVVKSEKELGQKIKEDAEKQFVQQADQKLL 294
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++ L E + ++ + +++ + + +++ +
Sbjct: 295 NDVTEALIAQTKFDL------------PGEFLTRWIQTSGEKPLTDQEAKAEYERSEQGL 342
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPG-HEKK-----MLDHFQKYPNA 408
++ I E N ++V+ E+++S + +Q+ ++ K +
Sbjct: 343 RYQLIEAKIIEANALQVSFEDLKSFAKDLIKEQMAQYGQLDPKDEELDGIAARVLSNQEE 402
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ L + K+I + + ++ ++++
Sbjct: 403 VKRLSEQMMSQKLITLYKEKANLKEKTLSYEDFVKE 438
>gi|302335569|ref|YP_003800776.1| trigger factor [Olsenella uli DSM 7084]
gi|301319409|gb|ADK67896.1| trigger factor [Olsenella uli DSM 7084]
Length = 439
Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats.
Identities = 69/455 (15%), Positives = 174/455 (38%), Gaps = 26/455 (5%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS- 61
V + + K + + + + + +DI K N +GFR G+ P I SL G++
Sbjct: 5 VTAERPDNDKVVATITVCAADVDKAIAAAYKDIARKYNFQGFRKGRAPRPVIDSLVGRAN 64
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+L++ ++++ + P +L + D RP + D + +
Sbjct: 65 VLAQATEDVMNDAQPMMLEQLDIVPVDRPD-------YGEHPVAVVEHEDFTTTATVLVP 117
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P E+ S+D + E E E+D+Q+ ++ +E ++ + + + +
Sbjct: 118 PACELDSYDAPAINMPPAEATEAEVDQQLEQLQSYRATYEDEDEDRPVAADDVIVCDIEN 177
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
+ + + + Q + + L S+ ++G+K + KEI D
Sbjct: 178 K-QGVPELAGEGRQLALNGSYLPSDFVAGVIGMKRDETKEISWTKAVDGESDH----DFA 232
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++ +++ + + ++ + A GF+S A+R ++I++ + + + ++++ I
Sbjct: 233 VSVTLRGIKRSVLPAIDEEFAKGTGFDSVEALRDAVREEIEEDKKRSLPSLKEDRLVEEI 292
Query: 302 -----SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
K + L +++ + S + E+ L A
Sbjct: 293 GRHLTLEKVPEAYQNQVFSELAQEFLGQLQRQGMSLDMYLAARQIKSEDFLADLREQAGE 352
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R + L + K +E TEE++++ K + F + + +R I
Sbjct: 353 RARQSLALDALATKLALEATEEDVRAEFE---RAGVDDVDKSIAEFTQS-GQMPAVRESI 408
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
K ++ ++++ + + D++ + ++ E
Sbjct: 409 RRTKAVNWLVENATVTEV----DEVAEKRAQKDAE 439
>gi|110801611|ref|YP_698705.1| trigger factor [Clostridium perfringens SM101]
gi|118574067|sp|Q0ST52|TIG_CLOPS RecName: Full=Trigger factor; Short=TF
gi|110682112|gb|ABG85482.1| trigger factor [Clostridium perfringens SM101]
Length = 428
Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats.
Identities = 88/439 (20%), Positives = 195/439 (44%), Gaps = 20/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + EL++ + + ++ + K NI GFR GKVP++ +K YG
Sbjct: 1 MEAKMNKIDTNVVELEIKVDAKDFNEALKKSYNKNSKKFNIPGFRKGKVPMNMVKKFYGV 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+ I + L + + R P I + E DL +
Sbjct: 61 EVLFDDAINACIDKTYGVALEENNVRPVDYPQIEVVEVG---------EGKDLVYKAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
P++ + + L+V + EV +++I++Q+A++ N E KE + + +D+
Sbjct: 112 TYPEVTLGDYKGLEVEEVSYEVKDEDIEKQLADMQARNARVETKEEGTVENGNIAVIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D+V E K+ +GS E L+GLK G+ K++ FPE + +DL GK
Sbjct: 172 GFIDDVAFEGGEGKDYPLEIGSGSFIDNFEEQLIGLKVGESKDVNVTFPEAYGKEDLNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++KE+ ++++ A F++ ++ +K + +E +++++ ++
Sbjct: 232 PAKFEVTVKEIKVKELPALDDEFAKEVSEFDTLEELKADLKEKAVKANELRAKREMEEKV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
++ + + ++PE+++ E +++ + + + +++ Y
Sbjct: 292 INAVVDNAKVEIPEAMINREVENMVRDLEMRLGQQGLSLEQYYEFTGSTEDKMKSYMKEN 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF--PGHEKKMLDHFQKYPNALAE 411
A+R+V T +V+ + E IE TEEE+++ + + +KM+D A
Sbjct: 352 AERKVKTDLVMSAVTEAEAIEATEEELKAKAEEVAKMYSNGAETEKMVDLLLN--AQRAA 409
Query: 412 LRAPIFEDKVIDHILKSVQ 430
L + +K + + +S++
Sbjct: 410 LELDVKREKTLKMLFESLK 428
>gi|15645414|ref|NP_207588.1| trigger factor [Helicobacter pylori 26695]
gi|3024733|sp|P56420|TIG_HELPY RecName: Full=Trigger factor; Short=TF
gi|2313924|gb|AAD07843.1| trigger factor (tig) [Helicobacter pylori 26695]
Length = 451
Score = 153 bits (385), Expect = 6e-35, Method: Composition-based stats.
Identities = 87/439 (19%), Positives = 201/439 (45%), Gaps = 22/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L + L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKLSIENLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEVPNEEKIDERLKQLAKDYAKFVDTNTQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFNLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSKYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEAFFKVKLHQIQAREMLEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKS 428
A ++ + ED+V+ ++L
Sbjct: 410 AAVKMAMIEDRVLAYLLDK 428
>gi|207091733|ref|ZP_03239520.1| trigger factor [Helicobacter pylori HPKX_438_AG0C1]
Length = 451
Score = 153 bits (385), Expect = 7e-35, Method: Composition-based stats.
Identities = 85/439 (19%), Positives = 201/439 (45%), Gaps = 22/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVP+S +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSIENLEKRYDKIAQKIAQKVKIDGFRRGKVPISLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++I+ ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKINGRLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSGYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L +++++ L
Sbjct: 231 AGKEALFKVKLHQIQAREALEINDELAKIVLANEENATLELLKERVERQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKS 428
A ++ + ED+V+ ++L
Sbjct: 410 AAVKMAMIEDRVLAYLLDK 428
>gi|332883565|gb|EGK03848.1| trigger factor tig [Dysgonomonas mossii DSM 22836]
Length = 462
Score = 153 bits (385), Expect = 7e-35, Method: Composition-based stats.
Identities = 73/453 (16%), Positives = 162/453 (35%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + L + + + + ++ R KANI GFRPG VP+ +K +YGK
Sbjct: 1 MNVSLTNVDSVNAILQINVTKEDYQEKLDNALKTFRKKANIPGFRPGTVPMGMVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SIL+E +++++ E + + + P + + D + +
Sbjct: 61 SILAEEVNKLVGENLYKYIQDNKLNVLGEPLPNEEKQQ----PIDFSLEGDYEFYFDVAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I++S +V EVDE+ +D+Q+A N +E E ++ D + +
Sbjct: 117 APEIKLSLTKKDKVKYYAIEVDEELVDKQIASYKANYGKYEKIEEGAKETDLIRGTISEL 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D + E ++ S VG K GD + + ++A
Sbjct: 177 EDGKVKEGGIFVEAGIVMPSYMKDEAEQAKFVGAKAGDVIVFNPGKAYNGNETEIASMLH 236
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++ + + + E + + +E + KVK I +
Sbjct: 237 IEKDAVETIAAEFQFAITEIT-RYQEAELDQDLFDKVFGAGNVTTEADFKAKVKEAIAEQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + E + + + E ++ + +
Sbjct: 296 FAPDSDYKFLLDAKELLEKKTGDLQFPDAFLKRWLVASGEERTAESVEADYPKIIADLKF 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQ----SALYQQLGRFPGH--EKKMLDHF----QKYPNALA 410
++ I + N+I++ E+M+ A Q ++ +M++++ K +
Sbjct: 356 HLIKEQIAKDNDIKIENEDMKIIAMQAARAQFAQYGMMNLPDEMVENYANDMLKNKDNAR 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L E+K+ID + + + + ++ D+
Sbjct: 416 NLLDRAMENKIIDVLKSKLGLEETVISLDEFRK 448
>gi|78778231|ref|YP_394546.1| trigger factor [Sulfurimonas denitrificans DSM 1251]
gi|119371027|sp|Q30NX0|TIG_SULDN RecName: Full=Trigger factor; Short=TF
gi|78498771|gb|ABB45311.1| Trigger factor [Sulfurimonas denitrificans DSM 1251]
Length = 433
Score = 153 bits (385), Expect = 7e-35, Method: Composition-based stats.
Identities = 84/442 (19%), Positives = 186/442 (42%), Gaps = 19/442 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ +++ IP + + + +++ A+++GFR GKVP++ IK YG+
Sbjct: 1 MKIKTNKINSANAQIEAEIPRTTIDANIEKIAKNLTKTASVQGFRKGKVPVTVIKKQYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDE---RAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
++ + E ++E++ + L + P+I+ + D ++ ++
Sbjct: 61 RLIQDAEAEALREVLNKGLDELKVAMSALIGEPNISKFDKSDDKIEVTVK--------IA 112
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+E + + + E E + ++ K+ ++ GD +D+
Sbjct: 113 MRPEINLENYADMVAPFKKPVISDKEVEDRLEKLADSQGKFVDLKKKRAAKDGDSAIIDF 172
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
S+D + E + + ++GS S E +VG+K G++K I+ FPE + + LAG
Sbjct: 173 EGSIDGELFEGGAAQEFALVLGSNQFISGFEEQVVGMKIGEEKVIKVTFPESYGSEKLAG 232
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFL-----VRQK 292
K ++ + + V ++ A ++ + +IK E ++
Sbjct: 233 KDAEFKVTLHNIQEKVKVEIDEAFAAKMLAGQDDKSLENLRAQIKLQLENEALAKLYNEE 292
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQYYH 351
+K +L+ K FD+PE +VE E + L + MS + + +E + +
Sbjct: 293 LKSALLETYVEKINFDLPEFVVEQEIDVSLNRKASTMSEDEIKELRENADKLQELRETFR 352
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ A++ V ++ + K + V E E+ +Y + + + D + K L
Sbjct: 353 LDAQKSVKATFIIDALATKEKVRVDENEVMQTIYYEAMQMGQDPRLAYDKY-KNAGYLPA 411
Query: 412 LRAPIFEDKVIDHILKSVQIVD 433
++ + EDKV+ IL + +I +
Sbjct: 412 IQMSMVEDKVLTQIL-NSKIKE 432
>gi|317012605|gb|ADU83213.1| trigger factor [Helicobacter pylori Lithuania75]
Length = 451
Score = 153 bits (385), Expect = 8e-35, Method: Composition-based stats.
Identities = 87/460 (18%), Positives = 209/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L + L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKLSIENLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIQECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFNLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSKYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
A K+ + ++ + +N++LA + E+A L ++++ L
Sbjct: 231 ASKEALFKVKLHQIQVREALEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQATEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPESLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|163847091|ref|YP_001635135.1| trigger factor [Chloroflexus aurantiacus J-10-fl]
gi|163668380|gb|ABY34746.1| trigger factor [Chloroflexus aurantiacus J-10-fl]
Length = 524
Score = 153 bits (385), Expect = 8e-35, Method: Composition-based stats.
Identities = 60/509 (11%), Positives = 165/509 (32%), Gaps = 57/509 (11%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+V + L + I ++ S ++ + K I+GFRPGK P I+ +G+
Sbjct: 27 KVTTEKLPKSLIALQIEIDRDQFERSLDQAARRLSQKFPIQGFRPGKAPRFIIERTFGRE 86
Query: 62 IL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
L E +E+I + + + + P++ I + +
Sbjct: 87 ALIEEATEELINTGYRKAIKQENIEVVGPPNLD-----------KIHSIEPFVFTVHVPV 135
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY--- 177
P + + + + V ++ + ++ ++ + +I + ++ + + +
Sbjct: 136 PPTVTLPDYRSIHVPLEVEPITDEMVEAALEQIREKHLTLQELDEPRPAQQGDQLQVRLK 195
Query: 178 -------------------------------------TVSVDNVILEDQSKKNVQFIVGS 200
+ + +
Sbjct: 196 TEIEGEEEEATEEQSEEAADDSEAKAETAADTEQTDDEEEEEEDDEIENEGSEETLPLEP 255
Query: 201 ADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNND 260
L E E L+G G++K I PEDH + L GKK+ + I ++ +
Sbjct: 256 NRLVPELYEGLIGTSVGEKKTIVAVLPEDHHEESLRGKKITFHVEILDIKRRIVPAWEEL 315
Query: 261 LAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNG 320
A+ + R + + Q+ ++ + + TFD+P+ ++ + +
Sbjct: 316 PALESFNGTFEEFRAHVRENLANQERKRAEQEQLNAYIEQLVEQTTFDIPDVMIRDVAHS 375
Query: 321 ILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVT 376
+L + + + V ++ ++ A+++V + L + ++ I V
Sbjct: 376 MLHEQEQQFARYGITLDQVLQYRGVTHDQAVEELIPEAEKQVKVTLALSEVIKQEGITVG 435
Query: 377 EEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKV 436
E+E+++ + L + ++ ++ + + + + + K+ +
Sbjct: 436 EDEIEAEIQTILESYDEKQRPQVERTLR-GQLRSSVANVVLDKKLRARLSAIASGNSTDT 494
Query: 437 TFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ +E + + +
Sbjct: 495 SDSSPAAPDAEGATDVTNSDEPVSRSSNE 523
>gi|302337811|ref|YP_003803017.1| trigger factor [Spirochaeta smaragdinae DSM 11293]
gi|301634996|gb|ADK80423.1| trigger factor [Spirochaeta smaragdinae DSM 11293]
Length = 454
Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats.
Identities = 83/450 (18%), Positives = 194/450 (43%), Gaps = 14/450 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
+ E +L V + + + + + + A I+GFR GK P ++ YG+ I
Sbjct: 7 VQHLENSAVKLTVTVEKDAAKKQYQDLLANYAKHAQIRGFRKGKAPAKILEQKYGEGIRE 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
E ++I+E + ++ + +E+ + + G IE D + YD+ P +
Sbjct: 67 EATVKLIEESLKQVFEEIEEKPLPYSQPEL---ADEKELGKIEDGEDFTFAVVYDVYPDV 123
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET---ESEIGDKVTVDYTVSV 181
++ S++ ++ +V +K+ DR++ +I + N K ++ +
Sbjct: 124 KLGSYEGFEIEVPEVKVTKKDEDRELEKIQEQNSMVVEKAEGAKAAKDDIVTVNYVELDG 183
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
+ ++ +++ F VG+ + + ++G+ ++K IE+ FPED+ K+LAGK V+
Sbjct: 184 EGKEKDESRREDFVFTVGTEYNLYKFDDDIIGMAKNEEKLIEKSFPEDYDYKELAGKSVK 243
Query: 242 LNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + + ++++LA +E+ + +R +++++ E R+ I D
Sbjct: 244 IKVVVTAIKEKQVPELDDELAQDVSDKYETLADLRKDIRRQLEESLEKKFREVKSEAIFD 303
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLAK 355
I VP S++ E Q+ + Q Q E + + A+
Sbjct: 304 KIIEGSELAVPTSMLTAELENSWQRFVQQSRMPEDQLVQFLQIQGKSKETVFEEWKPQAE 363
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
R + +++ I EK + EVT++E+++ + +Q ++ + F+K + ++
Sbjct: 364 RSLKVQLLMEKIIEKESPEVTDDEVEAEIRKQAEENGQEFDELKEAFEKN-GLMEMVKND 422
Query: 416 IFEDKVIDHILKSVQIVD-RKVTFDQLFDN 444
+ K D +++ +I +K + +
Sbjct: 423 LRNRKGFDLLIEKNKIKTGKKADYLDFMQD 452
>gi|315224013|ref|ZP_07865854.1| trigger factor [Capnocytophaga ochracea F0287]
gi|314945984|gb|EFS97992.1| trigger factor [Capnocytophaga ochracea F0287]
Length = 442
Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats.
Identities = 65/455 (14%), Positives = 157/455 (34%), Gaps = 26/455 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + + I N D + + D R A+I GFR G VP IK YGK
Sbjct: 1 MNINREQVDALNAVIKIAIEKNDYADKVEKVLNDYRKTASIPGFRKGHVPAGMIKRQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + I+ ++++ + + + P + D +
Sbjct: 61 AVKFDEINRVLQDSLYKYIGDEKLNILGNP-------LPKEKKDIDLEADDFTFEFEIGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P IE++ + + V + +ID+Q+ I K K +
Sbjct: 114 APAIEVNLQPKKGIVRYEITVTDDQIDKQIERIQKQFGKLVAKGEVIDDDSL-------E 166
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V ++ + Q +L + + VG K GDQ +++ + + +
Sbjct: 167 VTGTFFNEEKGIDSQATFTLEELSNAVRKEFVGKKIGDQFQLQTKGLFKDAHSLM--HYL 224
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++ ++ R + +E +R K++
Sbjct: 225 KVSHDEAHHLDVEVTFTLEEVNEREKAALNQELFNKLFPDGSVTTEEQLRNKIREGAQQQ 284
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + ++ + + + ++ + EE+ + + +++ +
Sbjct: 285 YNEQADQHFLNTVTDYLVDNTQFDLPVAFLKKWLRTAGEKELTEEEAEKEYEHSEKGLRY 344
Query: 361 GIVLGTIGEKNNIEVTEEEMQS----ALYQQLGRFPGHEKK------MLDHFQKYPNALA 410
++ G + E NN+ EE++ + QL ++ ++D + +
Sbjct: 345 QLIEGKVMEDNNLHPKFEELKDFARTYIKAQLSQYGMPTDDDSYVDGIVDRVLQNREEVQ 404
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ + K+I+ ++V +KVTFD+ +
Sbjct: 405 RIQQQLVFKKLIEFYKENVNTDVKKVTFDEFVKLA 439
>gi|15611798|ref|NP_223449.1| trigger factor [Helicobacter pylori J99]
gi|11387163|sp|Q9ZL49|TIG_HELPJ RecName: Full=Trigger factor; Short=TF
gi|4155287|gb|AAD06304.1| TRIGGER FACTOR [Helicobacter pylori J99]
Length = 451
Score = 152 bits (384), Expect = 9e-35, Method: Composition-based stats.
Identities = 88/460 (19%), Positives = 210/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSIEDLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ L + P+ T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNALKELGVETKDLIGSPNFTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++++ ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIQECVPSVGVEVPNEEKVNERLKQLAKDYAKFVDTDSQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ ++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQASEEKEFPLTFPSGYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ ++++ + +N++LA + E+A L +++K L
Sbjct: 231 AGKEALFKVKLRQIQVREALEINDELAKIVLANEENATLELLKERVKGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q+ +E +
Sbjct: 291 EELKEKLIENLDEKILFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQDSQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V V+ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFVIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|322378953|ref|ZP_08053367.1| trigger factor [Helicobacter suis HS1]
gi|322379807|ref|ZP_08054104.1| trigger factor [Helicobacter suis HS5]
gi|321147775|gb|EFX42378.1| trigger factor [Helicobacter suis HS5]
gi|321148629|gb|EFX43115.1| trigger factor [Helicobacter suis HS1]
Length = 434
Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats.
Identities = 94/437 (21%), Positives = 182/437 (41%), Gaps = 18/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + + + I + GFR GKVPL IK Y
Sbjct: 1 MDLKTKRLDSANARVYAKPLVQDFEKKSQSIAQKIAKNTKLDGFRRGKVPLDIIKQRYHG 60
Query: 61 SILSETIDEIIKEIVPE---ILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I E+ EI+ I+ E L ++ PS++ + D G + +++ LR
Sbjct: 61 HIQQESQKEILDAILKEGAKALEITNQDIIGNPSVS----KFDKQEGYFDIEIEIGLRPQ 116
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
D+ +E L + E ++ + + + E +GD V D+
Sbjct: 117 IDLSAVLECVPSFSLD----AIQESAVEERLEILAKQRASFSDAPAEKAVALGDGVIFDF 172
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+DN E +N IVG L E LVG+K GD+K FP D++ +LAG
Sbjct: 173 EGLLDNQPFEGNRAQNFALIVGENRLLPSFEEQLVGMKAGDEKYFSVTFPSDYANTNLAG 232
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVRQK 292
K+V + + ++ +++ + + + L Q+IK L Q+
Sbjct: 233 KEVSFHVKLHKIQLRKIPEIDDAFIKAVLNQEKEPTLELLKQRIKDQLFLEAKTKLYNQQ 292
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQYYH 351
+K ++D + +FD+P+++VE E + L + MS+ ++ Q +E + +
Sbjct: 293 LKETLIDKLDESLSFDLPQTIVEQEMDLALNQALEGMSTEQVKELQEDSQKLQEKRESFR 352
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A+R V ++ + ++ I+V + E+ +Y + + +++L+ ++K N L
Sbjct: 353 QQARRSVKVTFIVDALAKQEKIQVGDNEVFQTIYYEAMMTNQNPQQVLEFYRKN-NMLPA 411
Query: 412 LRAPIFEDKVIDHILKS 428
++ + ED+V+ +L
Sbjct: 412 VKMAMIEDRVLTFLLDK 428
>gi|158336584|ref|YP_001517758.1| trigger factor [Acaryochloris marina MBIC11017]
gi|158306825|gb|ABW28442.1| trigger factor [Acaryochloris marina MBIC11017]
Length = 548
Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats.
Identities = 68/448 (15%), Positives = 178/448 (39%), Gaps = 24/448 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-K 60
+V ++ G + L++ I + ++ + I ANI GFR GKVP I +G
Sbjct: 9 KVTQEKLPGSQISLEIEISPEQSRQAYEQVIIKFMRSANIPGFRKGKVPKQVILQRFGTD 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + +++++++ + + + A D + E + +S D+
Sbjct: 69 QLKASALEDLVQKNFEAAVKQEEIEALGNVQF---RSSFDELAAEFEPGKAIVFAVSVDV 125
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE----------IG 170
P++ + + D +VT + E + ++D + E +N E +
Sbjct: 126 PPEVTLKKYQDFKVTAEKIEYEAAKVDEVLEEHRSSNATLVPVEDRAAAANDVTLVDFES 185
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
+ + + E +S ++ Q + + + ++G++ G+ K I P+++
Sbjct: 186 RFLPSESDADEEGETPEGESVQDFQLELVKGKFIDDLIDGIIGMQIGETKNIAVTLPQEY 245
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLV 289
+LAG+ S+K++ + +++D A F + + +R ++ +Q ++
Sbjct: 246 FQDELAGRSAEFTVSLKDIKAKELPPLDDDFAQDVSEFSTLAELRQFLEEQYQQEAQDST 305
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE--EDL 347
V+ +L+ + + D+PES++++E N ++++ + S + + + E
Sbjct: 306 DANVEAALLEALIEELDVDLPESMIDDELNVMIRETLSRLQSNGLDINKLVTKEMLGEMK 365
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ A R+ + L + + +I V + + + L G +
Sbjct: 366 ERMRSDAIPRLKRTLALAEVAKAESITVEADAIADRCQEILKDLQGQDID-------RDR 418
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRK 435
A + + +V+ + + ++ +
Sbjct: 419 LEAVVEDELLHKQVVAWLTEHSEVELVE 446
>gi|300173596|ref|YP_003772762.1| trigger factor [Leuconostoc gasicomitatum LMG 18811]
gi|299887975|emb|CBL91943.1| Trigger factor [Leuconostoc gasicomitatum LMG 18811]
Length = 431
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 69/436 (15%), Positives = 171/436 (39%), Gaps = 26/436 (5%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSETI 67
+ + L+ I ++ + + ++ +I GFR GKV + S +G+ + +T+
Sbjct: 10 QKNQGTLEFKISRAQVEAGLEKAFQQNKNDVSIPGFRKGKVTKALFFSKFGEEALYQQTM 69
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
D ++ + + RP+I D ++ P++++
Sbjct: 70 DIVLPTAYEAAVDESGITPVGRPNIEPVSM---------NKGEDWTMKAEITTAPEVKLG 120
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYTVSVDNVI 185
+ +L+V EV + +++ ++ + ++E ++E GD V +D+ SVD
Sbjct: 121 EYLNLEVEAADTEVTDADVEAEIKHLQDGQAELVLQEASVKAENGDTVILDFDGSVDGDH 180
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ + +GS E LVG G+ + FP+D+ DLA K+
Sbjct: 181 FDGGQADDFSLELGSGQFIPGFEEQLVGHSAGEDVNVTVTFPKDYQAADLANKEALFEVK 240
Query: 246 IKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
I E+ ++++ A E+ + ++ ++K+ + + + ++ +
Sbjct: 241 IHELKRKELPEIDDEFAKDVDEEVETLAELKEKTAKKLTEDKAESAQAAFEDAVITKAVD 300
Query: 304 KYT---FDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLAKR 356
+ VPE++++ + + + + ++ Q +++ + + A+
Sbjct: 301 NASIDGDKVPEAMIDEDVHRQIDQYLAQLQQQGISREMFFQISGQTEDDLHKQFEEGAET 360
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV T +VL I + IE +E+++ + ++ ++ + L+ I
Sbjct: 361 RVKTNLVLEAIVKAEAIEPSEDQINEEVTNLATQYKMEAAQVRANLSDS-----LLKHDI 415
Query: 417 FEDKVIDHILKSVQIV 432
+VI + S +
Sbjct: 416 AMREVIKRVTDSAKAK 431
>gi|182627115|ref|ZP_02954833.1| cinA family protein [Clostridium perfringens D str. JGS1721]
gi|177907504|gb|EDT70162.1| cinA family protein [Clostridium perfringens D str. JGS1721]
Length = 440
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 90/439 (20%), Positives = 195/439 (44%), Gaps = 20/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + EL++ + + ++ + K NI GFR GKVP++ +K YG
Sbjct: 13 MEAKMNKIDTNVVELEIKVDAKDFNEALKKSYNKNSKKFNIPGFRKGKVPMNMVKKFYGV 72
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+ I + L + + R P I + E DL +
Sbjct: 73 EVLFDDAINACIDKTYGVALEENNVRPVDYPQIEVVEVG---------EGKDLVYKAKVT 123
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
P++ + + L+V + EV E++I++Q+A++ N E KE + + +D+
Sbjct: 124 TYPEVTLGDYKGLEVEEVSYEVKEEDIEKQLADMQARNARVETKEEGTVENGNIAVIDFK 183
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D+V E K+ +GS E LVGLK G+ K++ FPE + +DL GK
Sbjct: 184 GFIDDVAFEGGEGKDYPLEIGSGSFIDNFEEQLVGLKVGESKDVNVTFPEAYGKEDLNGK 243
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++KE+ ++++ A F++ ++ +K + +E +++++ ++
Sbjct: 244 PAKFEVTVKEIKVKELPALDDEFAKEVSEFDTLEELKADLKEKAVKANELRAKREMEEKV 303
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
++ + + ++PE+++ E +++ + + + +++ Y
Sbjct: 304 INAVVDNAKVEIPEAMINREVENMVRDLEMRLGQQGLSLEQYYEFTGSTEDKMKSYMKEN 363
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF--PGHEKKMLDHFQKYPNALAE 411
A+R+V T +V+ + E IE TEEE+++ + + +KM+D A
Sbjct: 364 AERKVKTDLVMSAVTEAEAIEATEEELKAKAEEVAKMYSNGAETEKMVDLLLN--AQRAA 421
Query: 412 LRAPIFEDKVIDHILKSVQ 430
L + +K + + +S++
Sbjct: 422 LELDVKREKTLKMLFESLK 440
>gi|18310376|ref|NP_562310.1| trigger factor [Clostridium perfringens str. 13]
gi|110800198|ref|YP_696089.1| trigger factor [Clostridium perfringens ATCC 13124]
gi|168207805|ref|ZP_02633810.1| trigger factor [Clostridium perfringens E str. JGS1987]
gi|168212101|ref|ZP_02637726.1| trigger factor [Clostridium perfringens B str. ATCC 3626]
gi|168215324|ref|ZP_02640949.1| trigger factor [Clostridium perfringens CPE str. F4969]
gi|168217825|ref|ZP_02643450.1| trigger factor [Clostridium perfringens NCTC 8239]
gi|21264068|sp|Q8XKK0|TIG_CLOPE RecName: Full=Trigger factor; Short=TF
gi|118574066|sp|Q0TQK1|TIG_CLOP1 RecName: Full=Trigger factor; Short=TF
gi|18145056|dbj|BAB81100.1| trigger factor [Clostridium perfringens str. 13]
gi|110674845|gb|ABG83832.1| trigger factor [Clostridium perfringens ATCC 13124]
gi|170660862|gb|EDT13545.1| trigger factor [Clostridium perfringens E str. JGS1987]
gi|170709984|gb|EDT22166.1| trigger factor [Clostridium perfringens B str. ATCC 3626]
gi|170713285|gb|EDT25467.1| trigger factor [Clostridium perfringens CPE str. F4969]
gi|182380155|gb|EDT77634.1| trigger factor [Clostridium perfringens NCTC 8239]
Length = 428
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 90/439 (20%), Positives = 195/439 (44%), Gaps = 20/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + EL++ + + ++ + K NI GFR GKVP++ +K YG
Sbjct: 1 MEAKMNKIDTNVVELEIKVDAKDFNEALKKSYNKNSKKFNIPGFRKGKVPMNMVKKFYGV 60
Query: 61 SIL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L + I+ I + L + + R P I + E DL +
Sbjct: 61 EVLFDDAINACIDKTYGVALEENNVRPVDYPQIEVVEVG---------EGKDLVYKAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
P++ + + L+V + EV E++I++Q+A++ N E KE + + +D+
Sbjct: 112 TYPEVTLGDYKGLEVEEVSYEVKEEDIEKQLADMQARNARVETKEEGTVENGNIAVIDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D+V E K+ +GS E LVGLK G+ K++ FPE + +DL GK
Sbjct: 172 GFIDDVAFEGGEGKDYPLEIGSGSFIDNFEEQLVGLKVGESKDVNVTFPEAYGKEDLNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++KE+ ++++ A F++ ++ +K + +E +++++ ++
Sbjct: 232 PAKFEVTVKEIKVKELPALDDEFAKEVSEFDTLEELKADLKEKAVKANELRAKREMEEKV 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
++ + + ++PE+++ E +++ + + + +++ Y
Sbjct: 292 INAVVDNAKVEIPEAMINREVENMVRDLEMRLGQQGLSLEQYYEFTGSTEDKMKSYMKEN 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF--PGHEKKMLDHFQKYPNALAE 411
A+R+V T +V+ + E IE TEEE+++ + + +KM+D A
Sbjct: 352 AERKVKTDLVMSAVTEAEAIEATEEELKAKAEEVAKMYSNGAETEKMVDLLLN--AQRAA 409
Query: 412 LRAPIFEDKVIDHILKSVQ 430
L + +K + + +S++
Sbjct: 410 LELDVKREKTLKMLFESLK 428
>gi|78188219|ref|YP_378557.1| trigger factor [Chlorobium chlorochromatii CaD3]
gi|119370887|sp|Q3AU11|TIG_CHLCH RecName: Full=Trigger factor; Short=TF
gi|78170418|gb|ABB27514.1| trigger factor [Chlorobium chlorochromatii CaD3]
Length = 440
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 84/451 (18%), Positives = 181/451 (40%), Gaps = 25/451 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ ++EL++I+ + +N+ +++ + +IKGFR G P+ +K L G
Sbjct: 1 MQKTITPLSPTEQELEIILSAEEFGPEYNKELDEAKRTVHIKGFRKGHAPMGLLKKLAGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI +++ + +I++ + + A R I D L L+L Y+I
Sbjct: 61 SIEIAVAEKLGGKYFTDIITAENIKPANRAQIADFAFTDD----------TLTLKLVYEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ F T+ V +KE++R++ I K++ + + D V D
Sbjct: 111 HPEFELQDFSGYTFTKANYVVGDKEVEREIELILKSHGTMVTSDEPASEKDTVIGDALRF 170
Query: 181 -VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG-- 237
+ + E N F + + L+G K GD E+ ++ + A
Sbjct: 171 NDEGELDEASKVANHHFSMEYLPAENPFRIALLGKKAGDVVEVVNTPIKEDEEGEEATAE 230
Query: 238 -----KKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLV 289
K R ++ EV ++++L F++ + + +++QH
Sbjct: 231 DAEAVKPTRFQVTVTEVKRLELPELDDELVKEISQERFDNVADFKADVRLQLEQHFTMKS 290
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ I + + VP S+VE+ + +L+ + ++S K +V
Sbjct: 291 DNDLLEAISGKMVEENPVPVPNSMVESFQDMLLENAKRQLSGNFPKGFDVT----GFRAS 346
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A++ ++ + E N + VT+E++ + ++ G+ + K + K P+
Sbjct: 347 MRDNAEKHARWMLITQKVAEMNKLTVTDEDIVAFAEKEAGKNEALDIKQIIETYKSPDFH 406
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
+ I ++KV + I + V + + + +
Sbjct: 407 DYIADSIMKEKVYNAITEKVTVTEEETPVPE 437
>gi|322629163|gb|EFY25942.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322682024|gb|EFY78049.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322685147|gb|EFY81144.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323223059|gb|EGA07402.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323244081|gb|EGA28090.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
Length = 334
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 66/341 (19%), Positives = 162/341 (47%), Gaps = 9/341 (2%)
Query: 108 GTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES 167
D + +++ P++E++ + ++V + + EV + ++D + + K ++ K+ +
Sbjct: 1 MGEDFTYSVEFEVYPEVELTGLESIEVEKPVVEVTDADVDVMLDTLRKQQATWKEKDGAA 60
Query: 168 EIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFP 227
+ D+VT+D+T SVD E + +G + + + G K G++ I+ FP
Sbjct: 61 DAEDRVTIDFTGSVDGEEFEGGKATDFVLAMGQGRMIPGFEDGVKGHKAGEEFTIDVTFP 120
Query: 228 EDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESA--MRGLCSQKIKQHS 285
E++ ++L GK + ++K+V + + R G E S +R + +++
Sbjct: 121 EEYHAENLKGKAAKFVINLKKVEERELPELTEEFIKRFGVEDGSVAGLRAEVRKNMEREL 180
Query: 286 EFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEE 345
+ VR +VK Q ++ + DVP +L+++E + + ++ N E
Sbjct: 181 KGAVRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGG------NEKQALEL 234
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ + AKRRV+ G++LG + N ++ EE ++ + + + K++++ + K
Sbjct: 235 PRELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAY-EDPKEVIEFYSKN 293
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ +R E++ ++ +L ++ ++ +F++L + +
Sbjct: 294 KELMDNMRNVALEEQAVEAVLAKAKVSEKATSFNELMNQQA 334
>gi|237750217|ref|ZP_04580697.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
gi|229374111|gb|EEO24502.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
Length = 430
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 85/433 (19%), Positives = 174/433 (40%), Gaps = 21/433 (4%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSE 65
+ + I + + GFR GKVP+ +K Y S+L E
Sbjct: 4 ERINEANAKASGKIAIETINKHIETLASKYAKTMKLDGFRKGKVPVRIVKERYRDSLLEE 63
Query: 66 TIDEIIKEIVPEILSKRDE---RAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
+ + I E + + +P I+ E E + + L I P
Sbjct: 64 SRQQSINEFFANAIKALNITEKDVIGQPLISKFE----------ESESGIDIELKIGITP 113
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYTVSV 181
+ ++ +K++D ++ ++AKN + + + G +D+ +
Sbjct: 114 TFSVDDAISCMPKFKPEKITDKQVDERLEQLAKNRAPVVPSKAKKLKSGHIAHIDFEGFL 173
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D + + +GS + L+G+ G++K I+ FPE++ +LAGK V+
Sbjct: 174 DGKAFDGGKAEKFDLTIGSNQFIPGFEDALIGMSVGEEKMIDVTFPENYQAPNLAGKAVQ 233
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR-----Q 296
+ + V +++ A + + E +IK+ E + K+ +
Sbjct: 234 FKVKLHAIKQKDEVTIDDAFAKAILGDKEENTLATLKDQIKKDLERESKMKLYNEKLKEE 293
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQYYHMLAK 355
L+ I+ K+TFD+PE+++E E N +L M + + + +E + A+
Sbjct: 294 ALENIAKKFTFDLPENILEQEMNVLLNNEISSMKQEEIEALRGNEDKVKELREAQRPKAE 353
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
V V+ + ++ I V + E+ LY + + +++++H++K N L ++
Sbjct: 354 MSVKVTFVVDKLAKQEKISVDDNEVFQTLYYESMMSGQNPQEVIEHYRKN-NLLPAVKMA 412
Query: 416 IFEDKVIDHILKS 428
I ED+VI H+L
Sbjct: 413 IIEDRVITHLLDK 425
>gi|210134995|ref|YP_002301434.1| trigger factor [Helicobacter pylori P12]
gi|226738682|sp|B6JM26|TIG_HELP2 RecName: Full=Trigger factor; Short=TF
gi|210132963|gb|ACJ07954.1| trigger factor [Helicobacter pylori P12]
Length = 451
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 87/461 (18%), Positives = 209/461 (45%), Gaps = 22/461 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSIENLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++I+ ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKINERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFNLILGSKQMLEDFEKALLGMQAGEEKEFPLIFPSGYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLHQIQVREALEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKTQA 450
>gi|33862211|ref|NP_893772.1| trigger factor [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|41018178|sp|Q7UZK8|TIG_PROMP RecName: Full=Trigger factor; Short=TF
gi|33634429|emb|CAE20114.1| FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 473
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 74/438 (16%), Positives = 166/438 (37%), Gaps = 15/438 (3%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KS 61
V + L++ IPSN NE I I A I GFR GK+P + G
Sbjct: 8 VKTTALPQSRIALELEIPSNTCKSCVNETINSISRSAKIPGFRLGKIPKQVLIQRIGITQ 67
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + +++II + + L P + + LK+ L DI
Sbjct: 68 LHASALEKIIDKSWNQALKMESIEPLSEPELVD---GFESILKFFNPEKPLKITLQTDIA 124
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVDYT 178
P+ ++ L V + D K ID + + V+
Sbjct: 125 PEFKLKKSKGLSVEIKKSKFDPKSIDEALEKSRNQLANIIPVNNRPAKLGDIAVVSFKGV 184
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++ S ++ + + E +VG+K D K + FPED+S +D GK
Sbjct: 185 YKDSKKEIDGGSSDSMDLELEKNKMIPGFVEGIVGMKIDDNKTLTLRFPEDYSHEDSRGK 244
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE-SAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + S+K++ +N+D A + G + ++ +++K++ + + +
Sbjct: 245 EAIFDISLKDLKEKELPELNDDFAKQSGNKDSLKELKKDIEKQLKENFDNTQKNIKVEAL 304
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLAK 355
+D +S + ++P+++++ E +++ + ++ + + + + A+
Sbjct: 305 MDALSKELDAEIPKAMIDIEVRNNIEQTAQRFAQQGMDIKSTFTPELVKSLAESTRPQAE 364
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ V + L + E+ I V EE+ + + K++ +R
Sbjct: 365 KNVQRNLALKALSEREKITVDNEEIDQKMKEYEDEISKSPKQI-----DIQKLKDVVRND 419
Query: 416 IFEDKVIDHILKSVQIVD 433
+ ++K+I + ++ + +
Sbjct: 420 LLQEKLITWLEENSAVKE 437
>gi|317061425|ref|ZP_07925910.1| trigger factor [Fusobacterium sp. D12]
gi|313687101|gb|EFS23936.1| trigger factor [Fusobacterium sp. D12]
Length = 443
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 79/439 (17%), Positives = 173/439 (39%), Gaps = 19/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K E + + + + ++ + I + IKGFR G P + + Y
Sbjct: 15 MKYEVKKLEQSAVAISMKLEGSEFLPIRDKVVAKIGKEVEIKGFRKGHAPADAVLAQYKD 74
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E E++ + I+ +++ + ++ D+
Sbjct: 75 AVMDEVTQEVVNSNMETIIREKEIAPISTIK----------NPKVTMKDSSFEMDFEIDV 124
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
P+I++ + + ++ E E+ + ++M + + ++ ++E+GD V + +
Sbjct: 125 YPEIKLGEYKGISAEKESFEFKEEMLTQRMENMRNSKAKLVDCPEDHKAEMGDTVNLAFE 184
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D V E + Q +GS E LVG G + E++ FPE++ +LAGK
Sbjct: 185 GFIDGVPFEGGKSDSHQLKLGSKSFIDTFEEQLVGYVKGQEGEVKVNFPEEYHAAELAGK 244
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I + +N++LA LGFES ++ ++ I + +++
Sbjct: 245 PAVFKVKINAIQVMETPEMNDELAKELGFESLEDLKTKTTENIIAEGTQRAEDEYLGKLI 304
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVR----FEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+ F+VP S+++ E +++ + S + Q + + + +
Sbjct: 305 LKVVEASEFEVPVSMIQQEIQNEMRRFEQQLQQQGLSLDMYMQMMGGDKKAFEEQIKPMV 364
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA---E 411
+ R+ +VL I IE TEE++ + + + KM + + + A
Sbjct: 365 EPRIKNDLVLAEIARNEKIEATEEDITEKMAEVAKMYGMEVAKMEEELKTHNQLDAFKYS 424
Query: 412 LRAPIFEDKVIDHILKSVQ 430
++A I K ID I +
Sbjct: 425 VKAEIVMKKTIDFIKAEAK 443
>gi|257463896|ref|ZP_05628282.1| trigger factor, PPIase [Fusobacterium sp. D12]
Length = 429
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 79/439 (17%), Positives = 173/439 (39%), Gaps = 19/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K E + + + + ++ + I + IKGFR G P + + Y
Sbjct: 1 MKYEVKKLEQSAVAISMKLEGSEFLPIRDKVVAKIGKEVEIKGFRKGHAPADAVLAQYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+++ E E++ + I+ +++ + ++ D+
Sbjct: 61 AVMDEVTQEVVNSNMETIIREKEIAPISTIK----------NPKVTMKDSSFEMDFEIDV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
P+I++ + + ++ E E+ + ++M + + ++ ++E+GD V + +
Sbjct: 111 YPEIKLGEYKGISAEKESFEFKEEMLTQRMENMRNSKAKLVDCPEDHKAEMGDTVNLAFE 170
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D V E + Q +GS E LVG G + E++ FPE++ +LAGK
Sbjct: 171 GFIDGVPFEGGKSDSHQLKLGSKSFIDTFEEQLVGYVKGQEGEVKVNFPEEYHAAELAGK 230
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I + +N++LA LGFES ++ ++ I + +++
Sbjct: 231 PAVFKVKINAIQVMETPEMNDELAKELGFESLEDLKTKTTENIIAEGTQRAEDEYLGKLI 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVR----FEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+ F+VP S+++ E +++ + S + Q + + + +
Sbjct: 291 LKVVEASEFEVPVSMIQQEIQNEMRRFEQQLQQQGLSLDMYMQMMGGDKKAFEEQIKPMV 350
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA---E 411
+ R+ +VL I IE TEE++ + + + KM + + + A
Sbjct: 351 EPRIKNDLVLAEIARNEKIEATEEDITEKMAEVAKMYGMEVAKMEEELKTHNQLDAFKYS 410
Query: 412 LRAPIFEDKVIDHILKSVQ 430
++A I K ID I +
Sbjct: 411 VKAEIVMKKTIDFIKAEAK 429
>gi|89896260|ref|YP_519747.1| hypothetical protein DSY3514 [Desulfitobacterium hafniense Y51]
gi|119370877|sp|Q24RN9|TIG2_DESHY RecName: Full=Trigger factor 2; Short=TF 2
gi|89335708|dbj|BAE85303.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 434
Score = 152 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 68/439 (15%), Positives = 162/439 (36%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E + I D+ + + + GFR G VP S I+S YG
Sbjct: 1 MNAVLENIENSEARFRFTIDYKVFADALEKTYRKNKKNYQVAGFRKGNVPRSVIESQYGP 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +D I+ E + + P I + G IE +L ++ S
Sbjct: 61 TVFYQEALDLIMTEEYKKAVESLALNTIGDPDIEV---------GEIEKGQELSVKASVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
++P++ + + ++V ++ ++ E + + + TV
Sbjct: 112 VVPEVTLGQLEGIEVVMPKAREVKERDIDKVLEELQYKNKKITDKEIAPAEKGDTVTVDY 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + + + + ++ + L G + GD +I++ P DH +AGK
Sbjct: 172 DCELDGTKFEPVVDYKALLDDSSDTMGFEGQLEGAQKGDILDIKKVLPHDHPQPQIAGKT 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++K+V + +++ A ++ + R + ++Q + V+ + IL
Sbjct: 232 ACFKVTVKKVERIEILPLDDAFAQKVGNVSTMEEFRAEIKKNLEQAAAQRVQMQRNNAIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
+ + +PESL+ +L++ ++ + Q ++ + + A
Sbjct: 292 SELFKRCQVKIPESLIMQRAMSMLEQFSGQLEAEGGTLDLYLQLINKKSGDFKREVWEDA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + +L I ++ V+EEE+ + + QK + ++
Sbjct: 352 ENSLKADYILDKIIKEKGYTVSEEELNQGCEKFALSINMSPENAR---QKLGPLVHKVEH 408
Query: 415 PIFEDKVIDHILKSVQIVD 433
+ +K ++L+ I +
Sbjct: 409 DLKAEKAFQYLLEHAVIRE 427
>gi|208434706|ref|YP_002266372.1| trigger factor [Helicobacter pylori G27]
gi|226738683|sp|B5Z7F7|TIG_HELPG RecName: Full=Trigger factor; Short=TF
gi|208432635|gb|ACI27506.1| trigger factor [Helicobacter pylori G27]
Length = 451
Score = 152 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 86/461 (18%), Positives = 209/461 (45%), Gaps = 22/461 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSVEDLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIDQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDAHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++I+ ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKINERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+G+ + + + L+G++ ++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFTLILGNKQMLEDFEKALLGMQASEEKEFPLTFPSGYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L +++K L
Sbjct: 231 AGKEALFKVKLHQIQAREALEINDELAKIVLANEENATLKLLKERVKGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKILFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPESLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKTQA 450
>gi|67925946|ref|ZP_00519222.1| Trigger factor [Crocosphaera watsonii WH 8501]
gi|67852209|gb|EAM47692.1| Trigger factor [Crocosphaera watsonii WH 8501]
Length = 486
Score = 152 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 74/443 (16%), Positives = 177/443 (39%), Gaps = 21/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M+V ++ + L++ IP+ ++ ++ + ANI GFR GKVP + G
Sbjct: 20 MKVTQEKLPDSQIGLEIEIPAETGKKAYETEVKTLARTANIPGFRKGKVPRPILLQRLGS 79
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ I + T++++++ V + L + + +P++ D + L + D
Sbjct: 80 RYIKAITLEKLVQTSVEKALKQESIDSIGQPTL---SSALDELVDKFKPGEPLTFSAAVD 136
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-------DK 172
+ P IE+ + L + + D ++++ E K E K
Sbjct: 137 VAPTIELGDYQTLSIRAEETVYDPQQLEDWFKERQKELATLVPIEDRGAEMGDVAIVDYK 196
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
+ +E +++ + E +VG+K + KE+ FP+D+
Sbjct: 197 GVSTSEGEEEGEAIEGVEGTDLEVELEVGKFIEGMVEGIVGMKPEETKELPLKFPDDYPR 256
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQ 291
+DLAG+ V ++KE+ + +++D A +E+ + +R ++ K+ +E +Q
Sbjct: 257 EDLAGEPVTFTITLKELKAKELPELDDDFAEEVSEYETLAELRESLEKQFKESAEEETKQ 316
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED--LQY 349
+ I +S T D+P++LV++E +L + ++ + + + +
Sbjct: 317 SIYSAITSELSAICTADLPDTLVQDEVTKVLTQTAMQLEQMGMDLGQLFTQENLPKLREN 376
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A ++ +++ I + +I + E E++ + + G E +
Sbjct: 377 SRPEAVEKLTKSLIIQEIAKVESITLEETEIEERSNEIKEQLEGKEIDVDK-------LR 429
Query: 410 AELRAPIFEDKVIDHILKSVQIV 432
+ + +K + + + +
Sbjct: 430 TIVEEELISEKTLKLLQEKATVE 452
>gi|242309638|ref|ZP_04808793.1| trigger factor [Helicobacter pullorum MIT 98-5489]
gi|239523639|gb|EEQ63505.1| trigger factor [Helicobacter pullorum MIT 98-5489]
Length = 434
Score = 152 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 90/423 (21%), Positives = 189/423 (44%), Gaps = 23/423 (5%)
Query: 18 IIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPE 77
I L ++ ++ I GFR GK+P + IK+ YGK + S+ E +++++ +
Sbjct: 20 TISLEELDKKIDKVTKNAGKNLKIDGFRKGKIPTAVIKARYGKQLESDAQRECVQDLLQD 79
Query: 78 ILSKRDERA---AMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQV 134
IL + P IT + + + IE + P I + +
Sbjct: 80 ILKELQVEPNALIGDPKITKFDKKDNGIEIEIE----------LSLTPTIPLDKVESCIP 129
Query: 135 TQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
I EV E+EI++++ EIA E + + G+ +++ +D E
Sbjct: 130 EVKIPEVSEEEINKRLEEIADARAPLVGIEDGRRKLKDGEYAKINFEGFIDGEPFEGGKA 189
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+N +GS E L+G+K G++KEI FPE++ K+LAGK ++E+ +
Sbjct: 190 ENYLLKIGSKSFIEGFEEQLIGMKKGEEKEINVTFPENYHAKNLAGKPAIFKVKLQEIQT 249
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVRQKVKRQILDYISNKYT 306
+ ++++ A L E + A L +KIK+ + L ++K +++ + N
Sbjct: 250 KGKIEIDDNFAKTLLPEEKEANVALLKEKIKEQLATEKKQELYNNELKGTLIENLHNAID 309
Query: 307 FDVPESLVENEYNGILQKVRFEM-SSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLG 365
FD+P +VE E + +L+ ++ +K + + A++ V ++
Sbjct: 310 FDLPTLIVEQEMDLLLRNEFSKLPKEEQEKLAKDSQALKAKREEQRENAQKSVKVTFIID 369
Query: 366 TIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHI 425
I +++NI++ E+ + +Y + K +L+++ + N + ++ + ED+++ ++
Sbjct: 370 AIAKRDNIDIHNNEILNTIYYEAMAMRQDPKAVLEYY-QNNNLIPAIKMAMLEDRILTNL 428
Query: 426 LKS 428
L
Sbjct: 429 LNK 431
>gi|189347611|ref|YP_001944140.1| trigger factor [Chlorobium limicola DSM 245]
gi|238692195|sp|B3EGP8|TIG_CHLL2 RecName: Full=Trigger factor; Short=TF
gi|189341758|gb|ACD91161.1| trigger factor [Chlorobium limicola DSM 245]
Length = 427
Score = 152 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 76/439 (17%), Positives = 171/439 (38%), Gaps = 24/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ ++EL++I+ + +N+ +E+ + IKGFR G VP IK L G
Sbjct: 1 MQKNITKISDTEQELEIILSAEEFGTEYNQELEEAKRTVQIKGFRKGHVPAGMIKKLVGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + +++ + I + + + A R +I L ++LSY+I
Sbjct: 61 AIEASIAEKMASKHFSAIADEENIKPASRAAIESFSF----------DDNQLSIKLSYEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD-YTV 179
P+ E+ F+ TQ + ++++ +++ I K + + + D V D +
Sbjct: 111 HPEFELKGFEGYTFTQPRYTITDEDVQKEINLILKGHGTLISIDDAASATDTVIGDVVKL 170
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + E + +N F + + L G K G+ ++ ++ + +
Sbjct: 171 NAEGEAEEGSAMENHHFNLEYLPEENPFRSALTGKKAGEIADVTTEPKDEETPAQI---- 226
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++KEV + ++L FE + +++QH ++
Sbjct: 227 --YRITVKEVKRLELPELTDELVKEISGQRFEHAADFTSDVRLQLEQHFTMKSEDELLES 284
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I + + P++++ + N +++ + +M K + + Q A++
Sbjct: 285 ISAKLIEENPVSAPKTMIASFANMLVENAKRQMGGNFPKGFDAGQFE----QAMAPNAEK 340
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
++ I E NN+ VT++++++ ++ + P + + I
Sbjct: 341 HARWLLISQKIAEINNLSVTDDDIRAFAEKEAEKNPTLSVEEAISTYMSTEFRDYITDSI 400
Query: 417 FEDKVIDHILKSVQIVDRK 435
+DKV D I V I +
Sbjct: 401 LKDKVYDIIKSQVTITEEP 419
>gi|15806946|ref|NP_295671.1| trigger factor [Deinococcus radiodurans R1]
gi|12230735|sp|Q9RT21|TIG_DEIRA RecName: Full=Trigger factor; Short=TF
gi|6459734|gb|AAF11500.1|AE002033_8 trigger factor [Deinococcus radiodurans R1]
Length = 465
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/476 (14%), Positives = 186/476 (39%), Gaps = 33/476 (6%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSE 65
EG K E V +P+ + ++++ + + GFRPGK P I++ GK + S+
Sbjct: 6 SKEGNKVEFKVSVPAAEVNRAYDQVWAGLARDVRVPGFRPGKAPRKVIENRVGKGYVESQ 65
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
D +++ + L + ++ + ++ + + + P+++
Sbjct: 66 VRDRLLETHYSQGLRELGLNLV----------DATVDPQDVQSGQAFEFTVKGETYPEVK 115
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ + L+V+ E+ ++ +++ ++++ + N +FE E E D+VT+
Sbjct: 116 LGDWQGLKVSAQAPEITDEVLEQTLSDLRERNASFEKAERPIEAADQVTIQELGE----- 170
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
S++ + + L+G GD +I H D + +
Sbjct: 171 --GDSEEGGSYPIYLDMAEEHVRNALLGKSAGDVVDITVPA---HQHGDHEHAEHTVRVK 225
Query: 246 IKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
+ EV S +N++ A L +ES +R +++++ ++ + +++ ++
Sbjct: 226 VVEVSSKKLQDLNDEFATSLNYESMDKLRTDLREELERRAQQEGDNLRREELVGHLVEGM 285
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID------EEDLQYYHMLAKRRVL 359
T ++P++L++ G++ +++ ++ + + ++ +E A+ RV
Sbjct: 286 TVEIPQALIDRRREGMMSEIQDDLRRQGVQWKEYEAFMQEQGKLDEFEADLTKNAETRVR 345
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+ L + N +V E E L + ++++ + + + +
Sbjct: 346 RDLALEQLATDLNAQVNEAEFNQTLMNLAQANGMNVQQLVQQLGQDG--VQSYYISLLRE 403
Query: 420 ----KVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ + + Q + + + E ++++ + Q+E A SE
Sbjct: 404 RGLQRALAQLSGEGQSTEAASPKATGTEAAGTEQSEPAQTETAQNDAGQTETAQSE 459
>gi|320335799|ref|YP_004172510.1| Trigger factor [Deinococcus maricopensis DSM 21211]
gi|319757088|gb|ADV68845.1| Trigger factor [Deinococcus maricopensis DSM 21211]
Length = 437
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 70/422 (16%), Positives = 158/422 (37%), Gaps = 33/422 (7%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSETI 67
EG + E V +P+ +T ++ + + + GFRPGK P ++S G + +E
Sbjct: 8 EGNQVEFKVTVPATDVTRAYQQVWAALARDVRVPGFRPGKAPKKVLESRVGTGYVENEVR 67
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
D +++ P+ + +++I ++ + + D P++++
Sbjct: 68 DRLLQVHYPQAVRDLKLSMV----------DAEINPDPLKDGQSFEFTVKGDTYPEVKLG 117
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ + ++ + ++R +A++ + N FE E E D VT++
Sbjct: 118 DWKSATLQASAPDITDDVLERTLADLQERNATFETAERAIEATDMVTIEEQGEEGGTYPV 177
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ LVG GD EI HS D + + I
Sbjct: 178 YLDVAEAHV-----------RDALVGKNQGDTVEITVPA---HSHGDHEHPEHTVTVKIL 223
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
+V ++++ A L FES +R ++++ + + + ++++ T
Sbjct: 224 DVKHKQLQALDDEFAKSLNFESLERLRTDLKAELERRARQEGDNARREEFVNHLVEGMTV 283
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID------EEDLQYYHMLAKRRVLTG 361
D+P ++E +L +++ ++S K ++ ++ + A+ RV
Sbjct: 284 DIPSVMLERRREAMLGEIKDDLSRQGVKWDEYETFMKEQGKLDDFMADLGKNAETRVKRD 343
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ L + E +++ E + L +++ F PN L A I +K
Sbjct: 344 LALEQLAEDTGTTLSDTEFNAQLSALAQANGITVQQLRSQFG--PNGLNSYYASIVREKA 401
Query: 422 ID 423
+
Sbjct: 402 LQ 403
>gi|261837974|gb|ACX97740.1| trigger factor [Helicobacter pylori 51]
Length = 451
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 87/460 (18%), Positives = 213/460 (46%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPL+ +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSVENLEKRYDKIAQRIAQKVKIDGFRRGKVPLNLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++ +
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAN 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP ++ + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFTLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSEYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ ++++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLRQIQAREALEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQENQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|116618616|ref|YP_818987.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
gi|122271184|sp|Q03W08|TIG_LEUMM RecName: Full=Trigger factor; Short=TF
gi|116097463|gb|ABJ62614.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 431
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 75/434 (17%), Positives = 168/434 (38%), Gaps = 26/434 (5%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSETI 67
E + L+ I ++ + + + +++ +I GFR GKV +G+ + + +
Sbjct: 10 EKNQGTLEFEIARAQVEEGLEQAFQRNKNEVSIPGFRKGKVTKQLFFQKFGEEALYQQAM 69
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
D ++ + + RP+I L+ P I++
Sbjct: 70 DIVLPAAYEAAIDEAGITPVGRPNIEPVSM---------NKGEAWTLKAVVKTAPAIKLG 120
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYTVSVDNVI 185
+ +L+V EV + ++D ++ + ++E ++E GD V +D+ SVD V
Sbjct: 121 EYLNLEVEAQDEEVADADVDAEIKRLQDGQAELVLQEESVKAENGDTVVIDFDGSVDGVK 180
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ K+ +GS E LVG G+ + FPED+ DLAGK+ +
Sbjct: 181 FDGGQGKDFSLALGSGQFIPGFEEQLVGHTAGEDVNVNVTFPEDYQAADLAGKEALFEVT 240
Query: 246 IKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
I E+ ++++ A E+ + ++ S+K+ + + ++ +
Sbjct: 241 IHELKRKELPELDDEFAKDVDEEVETLAELKEKTSKKLADEKAQAAKAAFEDAVISKAVD 300
Query: 304 KY-------TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++ + V + + L +++ + S Q +++ + + A+
Sbjct: 301 NASVDGDEIPAEMIDEDVHRQIDQYLGQLQQQGISREMFFQISGQTEDDLHKQFEEGAET 360
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV TG++L I I+ + E++ + ++ E K+ + L+ I
Sbjct: 361 RVKTGLILEAIVAAEKIDPSAEQVSEEVASLAAQYNMEEDKVRAAISES-----MLKHDI 415
Query: 417 FEDKVIDHILKSVQ 430
+ I + S +
Sbjct: 416 AMREAIKKVTDSAK 429
>gi|261839390|gb|ACX99155.1| trigger factor [Helicobacter pylori 52]
Length = 451
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 88/460 (19%), Positives = 210/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANAHLSAKPSVENLEKRYDKIAQRIAQKVKIDGFRRGKVPLSLVKTRYRA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSGYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLHQIQAREVLEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEIDLLFRNDLYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|317178845|dbj|BAJ56633.1| trigger factor [Helicobacter pylori F30]
Length = 451
Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 90/460 (19%), Positives = 212/460 (46%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSIENLEKRYDKIAQRIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ L + P+ T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNALKELGIENKDLIGSPNFTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP ++ K L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQVGEEKEFPLTFPSEYHAKHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ ++++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLRQIQAREALEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNDLYSMQAEEVKSLQENQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|110597840|ref|ZP_01386123.1| trigger factor [Chlorobium ferrooxidans DSM 13031]
gi|110340565|gb|EAT59048.1| trigger factor [Chlorobium ferrooxidans DSM 13031]
Length = 427
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 86/438 (19%), Positives = 178/438 (40%), Gaps = 24/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ K ++E+++I+ + +N+ +E+ + IKGFR G P S IK L G
Sbjct: 1 MQKNIKNVSETEQEVEIILSAEEFGADYNQELEEAKRTIQIKGFRKGHAPASLIKKLAGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++ + EI+ + + A R + D+ L +RLSYDI
Sbjct: 61 SIEANIAEKLASKHFGEIVEAENIKPASRAQLIDFTFTPDL----------LTIRLSYDI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD-YTV 179
P+ E+ + T+ + ++++ R++ I K + + + D V D +
Sbjct: 111 HPEFELKDYSAYPFTRKSYSITDEDVQREINLILKGHGTMITVDEPAAATDTVIGDVIHI 170
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ E+Q N F + + + L G K GD E+ KD +
Sbjct: 171 NAAGEPDEEQKTDNHHFNLEYLPEDNPFRKELTGKKAGDVVEVTA------DQKDADIEP 224
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRL---GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
R +I E+ + ++L + FES + G ++ QH E +++
Sbjct: 225 TRFRVTISEIKRLELPELTDELVKEITGGRFESVTDFTGDVRIQLTQHFEAKSEEELLES 284
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I + + P+S+VE+ N +++ + +M KS + D + A++
Sbjct: 285 ISAKLIEENPVPAPKSMVESFSNMLVENAKRQMGGNFPKSFD----DAQFRLAMKPNAEK 340
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
++ I E + + VT++++++ ++ G+ + L + I
Sbjct: 341 HAQWLLISQKIAELDKLTVTDDDIKAYAEKEAGKNASMNAEDLLGTYLSAEFRDYITDTI 400
Query: 417 FEDKVIDHILKSVQIVDR 434
++K+ + I + I +
Sbjct: 401 LKEKIYEIIKSKITITEE 418
>gi|297379993|gb|ADI34880.1| trigger factor [Helicobacter pylori v225d]
Length = 451
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 87/460 (18%), Positives = 211/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSVENLEKRYDKIAQKIAPKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P+ T E + ++
Sbjct: 61 QIDQDAQEEMIQEVLKNAFKELGIENKDLIGSPNFTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTNNQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+G+ + + + L+G++ G++KE FP ++ + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGNKQMLEDFEKALLGMQAGEEKEFPLTFPSEYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ ++++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLRQIQAREALEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|332830356|gb|EGK02984.1| trigger factor tig [Dysgonomonas gadei ATCC BAA-286]
Length = 460
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 75/476 (15%), Positives = 162/476 (34%), Gaps = 37/476 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + L + + D + ++ R KAN+ GFRPG VP+ +K +YGK
Sbjct: 1 MNVSLTNVDSVNAILQISVAKADYQDKLDSALKTFRKKANVPGFRPGTVPVGMVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI++E I++I+ E + + + P + + + D +
Sbjct: 61 SIMAEEINKIVGESLYNYIQENKLNVLGEPLPNEEKQQ----AIDFATEGDYDFYFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I++S +VT +V+E+ +D+Q+ N ++ E + D + +
Sbjct: 117 APEIKLSLTKKDKVTYYKIDVNEELVDKQIESYKANYGKYDKIEDGALATDLIRGTISEL 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG--- 237
E ++ S ++ VG K GD + + ++A
Sbjct: 177 EGGKAKEGGISVEAGVVMPSYMKDADEQAKFVGAKAGDVITFNPGKAYEGNETEIASLLH 236
Query: 238 --------KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
F I E+ ++ DL ++ K+K+ E
Sbjct: 237 IEKDAVEAIAPEFKFEITEITRYKEAELDKDLFDKVFGADTVKDAAEFKAKVKETIEDQF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L V + + + E +A + I +
Sbjct: 297 APDSDYKFLLDAKELLEKKVGDIQFPDAFLKRWLLASGEERTAESIEADYPKIVADL--- 353
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQ----SALYQQLGRFPGH--EKKMLDHF- 402
++ I + +I++ E+M+ A Q ++ +M++++
Sbjct: 354 ---------KFHLIKEQIAKDYDIKIENEDMKTIAMQAARAQFAQYGMMNLPDEMVENYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
K + L E+K+ID + + I ++ ++ D + ++
Sbjct: 405 NDMLKNKDNARNLLERAMENKIIDALKTKLGIEEKSISLDDFRKFFEKEDDKQEEA 460
>gi|217034158|ref|ZP_03439578.1| hypothetical protein HP9810_868g51 [Helicobacter pylori 98-10]
gi|216943442|gb|EEC22898.1| hypothetical protein HP9810_868g51 [Helicobacter pylori 98-10]
Length = 451
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 88/460 (19%), Positives = 211/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSVENLEKRYDKIAQRIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIRECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP ++ + L
Sbjct: 171 DFEGFIDNAPFEGGEAENFSLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSEYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLHQIQAREVLEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNDLYSMQAEEVKSLQENQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|222524925|ref|YP_002569396.1| trigger factor [Chloroflexus sp. Y-400-fl]
gi|222448804|gb|ACM53070.1| trigger factor [Chloroflexus sp. Y-400-fl]
Length = 511
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 60/509 (11%), Positives = 165/509 (32%), Gaps = 57/509 (11%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+V + L + I ++ S ++ + K I+GFRPGK P I+ +G+
Sbjct: 14 KVTTEKLPKSLIALQIEIDRDQFERSLDQAARRLSQKFPIQGFRPGKAPRFIIERTFGRE 73
Query: 62 IL-SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
L E +E+I + + + + P++ I + +
Sbjct: 74 ALIEEATEELINTGYRKAIKQENIEVVGPPNLD-----------KIHSIEPFVFTVHVPV 122
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY--- 177
P + + + + V ++ + ++ ++ + +I + ++ + + +
Sbjct: 123 PPTVTLPDYRSIHVPLEVEPITDEMVEAALEQIREKHLTLQELDEPRPAQQGDQLQVRLK 182
Query: 178 -------------------------------------TVSVDNVILEDQSKKNVQFIVGS 200
+ + +
Sbjct: 183 TEIEGEEEEATEEQSEEAADDSEAKAETAADTEQTDDEEEEEEDDEIENEGSEETLPLEP 242
Query: 201 ADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNND 260
L E E L+G G++K I PEDH + L GKK+ + I ++ +
Sbjct: 243 NRLVPELYEGLIGTSVGEKKTIVAVLPEDHHEESLRGKKITFHVEILDIKRRIVPAWEEL 302
Query: 261 LAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNG 320
A+ + R + + Q+ ++ + + TFD+P+ ++ + +
Sbjct: 303 PALESFNGTFEEFRAHVRENLANQERKRAEQEQLNAYIEQLVEQTTFDIPDVMIRDVAHS 362
Query: 321 ILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVT 376
+L + + + V ++ ++ A+++V + L + ++ I V
Sbjct: 363 MLHEQEQQFARYGITLDQVLQYRGVTHDQAVEELIPEAEKQVKVTLALSEVIKQEGITVG 422
Query: 377 EEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKV 436
E+E+++ + L + ++ ++ + + + + + K+ +
Sbjct: 423 EDEIEAEIQTILESYDEKQRPQVERTLR-GQLRSSVANVVLDKKLRARLSAIASGNSTDT 481
Query: 437 TFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ +E + + +
Sbjct: 482 SDSSPAAPDAEGATDVTNSDEPVSRSSNE 510
>gi|256820834|ref|YP_003142113.1| trigger factor [Capnocytophaga ochracea DSM 7271]
gi|256582417|gb|ACU93552.1| trigger factor [Capnocytophaga ochracea DSM 7271]
Length = 442
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 64/455 (14%), Positives = 157/455 (34%), Gaps = 26/455 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + + I N D + + D R A+I GFR G VP IK YGK
Sbjct: 1 MNINREQVDALNAVIKIAIEKNDYADKVEKVLNDYRKTASIPGFRKGHVPAGMIKRQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + I+ ++++ + + + P + D +
Sbjct: 61 AVKFDEINRVLQDSLYKYIGDEKLNILGNP-------LPKEKKDIDLDADDFTFEFEIGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P IE++ + + V + +ID+Q+ I K K +
Sbjct: 114 APAIEVNLQPKKGIVRYEITVTDDQIDKQIERIQKQFGKLVAKGEVIDDDSL-------E 166
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V ++ + Q +L + + VG K GDQ +++ + + +
Sbjct: 167 VTGTFFNEEKGIDSQATFTLEELSNAVRKEFVGKKIGDQFQLQTKGLFKDAHSLM--HYL 224
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++ ++ R + +E +R K++
Sbjct: 225 KVSHDEAHHLDVEVTFTLEEVNEREKAALNQELFNKLFPDGSVTTEEQLRNKIREGAQQQ 284
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + ++ + + + ++ + E++ + + +++ +
Sbjct: 285 YNEQADQHFLNTVTDYLVDNTQFDLPVAFLKKWLRTAGEKELTEQEAEKEYEHSEKGLRY 344
Query: 361 GIVLGTIGEKNNIEVTEEEMQS----ALYQQLGRFPGHEKK------MLDHFQKYPNALA 410
++ G + E NN+ EE++ + QL ++ ++D + +
Sbjct: 345 QLIEGKVMEDNNLHPKFEELKDFARTYIKAQLSQYGMPTDDDSYVDGIVDRVLQNREEVQ 404
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ + K+I+ ++V +KVTFD+ +
Sbjct: 405 RIQQQLVFKKLIEFYKENVNTDVKKVTFDEFVKLA 439
>gi|305432740|ref|ZP_07401900.1| trigger factor [Campylobacter coli JV20]
gi|304444249|gb|EFM36902.1| trigger factor [Campylobacter coli JV20]
Length = 444
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 90/436 (20%), Positives = 184/436 (42%), Gaps = 22/436 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP++ + Y K
Sbjct: 1 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKNVKMDGFRPGKVPVAAVLKRYQK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERA---AMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + + K V L + + A P ++ L+
Sbjct: 61 ELTQDAEQNLFKSAVDSALKELKKEAKELVGEPYFE----------KFDRKDGEIVAELA 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTV 175
P+ ++ ++ L +V +KEID + E+ K E +T+ + GD
Sbjct: 111 LSFKPEFKLDGYEKLIPEYQTPKVTKKEIDEKKEELLKRFATPEAIKTKRALKEGDFAKF 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ VD + +N +GS E +VG+K+G++K+I+ FP+++ L
Sbjct: 171 DFEGFVDGKAFDGGKAENYVLEIGSKQFIPGFEEGMVGMKSGEEKDIKVTFPKEYGAAHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----R 290
AGK + E+ +++++ +L E A + +K+K+ +
Sbjct: 231 AGKDAVFKVKLHEIQELKLPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQY 349
++K + D + KY FD+P+ +VE E + ++ S + + +E
Sbjct: 291 DELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDS 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A++ V ++ + + IEV ++E+ A+Y + R+ + K+ L++++K AL
Sbjct: 351 FKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKK-QGAL 409
Query: 410 AELRAPIFEDKVIDHI 425
++ + E+K+ + I
Sbjct: 410 PAVKMALIEEKLFNDI 425
>gi|123969396|ref|YP_001010254.1| trigger factor [Prochlorococcus marinus str. AS9601]
gi|166229918|sp|A2BTN6|TIG_PROMS RecName: Full=Trigger factor; Short=TF
gi|123199506|gb|ABM71147.1| FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
[Prochlorococcus marinus str. AS9601]
Length = 474
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 74/436 (16%), Positives = 167/436 (38%), Gaps = 15/436 (3%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KS 61
V + ++ IPS NE I I A I GFR GK+P + G
Sbjct: 8 VKTTPLPQSRISFELEIPSETCKTCVNETINSISRSAKIPGFRLGKIPKQVLIQRIGITQ 67
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + +++II + E L + P + + LK+ L D+
Sbjct: 68 LHASALEKIIDKSWQEALKIKSIEPLSEPELVD---GFESLLAKFSPEKSLKVTLQTDVA 124
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET---ESEIGDKVTVDYT 178
P++++ L V + D K ID + + + V+
Sbjct: 125 PELKLKKSKGLSVEISKTKFDPKSIDEALEKSRNQFANIIPVTNRAAKLGDIAVVSFKGK 184
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++ + +++ + + E +V +K GD K + FP+D+S +D GK
Sbjct: 185 YKDSGKEIDGGTSESMDLELEKNKMIPGFVEGIVKMKIGDTKTLNLKFPDDYSHEDSRGK 244
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K++ +N+D A + ES ++ +++K + E + +
Sbjct: 245 EAIFEVNLKDLKEKELPELNDDFAKQSGNKESLKELKKDIEKQLKDNFEKTQKDIKIEAL 304
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLAK 355
LD ++N+ ++P+S+++ E +++ + ++ + + + A+
Sbjct: 305 LDALTNELVAEIPKSMIDIEVRNNIEQTAQRFAQQGLDVKSTFTPELVKSLADSTRPQAE 364
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ V + L + E NI+V ++E+ S + K++ L
Sbjct: 365 KNVQRNLALKALAETENIKVEQDEIDSKMKDYEDAISQSSKQI-----DIKKLTEVLTND 419
Query: 416 IFEDKVIDHILKSVQI 431
+ ++K+I + ++ ++
Sbjct: 420 LLKEKLIIWLEENSEV 435
>gi|46198557|ref|YP_004224.1| trigger factor, PPIase [Thermus thermophilus HB27]
gi|81406226|sp|Q72L16|TIG_THET2 RecName: Full=Trigger factor; Short=TF
gi|46196179|gb|AAS80597.1| trigger factor, ppiase [Thermus thermophilus HB27]
Length = 404
Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats.
Identities = 73/426 (17%), Positives = 167/426 (39%), Gaps = 39/426 (9%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSETI 67
G ++ V +P++R+ S+ ++D+ S+ + GFRPGK PL +++ G+ +L +
Sbjct: 8 SGYLVKVRVEVPADRVKASYEALLKDLASRVRVPGFRPGKAPLKVVEARLGREALLQDLK 67
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
+ +++E PE + + + + + + + P++ +
Sbjct: 68 ERLVEETYPEAVRELGLSPVA----------ARVVEQDLSEGEGFRYVAEVENYPEVRLP 117
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ + EV E+ +++ + E+ + E E++ D + V
Sbjct: 118 DWRSFALEVSPPEVTEEMVEKALEELRQRYAELVPVEREAQEKDHLFVRTE--------- 168
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ +F + A E L+G K GD + + K + +
Sbjct: 169 ----EGAEFPIDLAKALPHVREALLGKKAGDVVMVPVLNDKG-------EKVREVRTEVL 217
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
EV + ++ + A L ES ++ + +K+ +E + +R L+ ++
Sbjct: 218 EVKTLKLPELDEEFAKTLEAESLEDLKNRVRESLKRQAERAYEEARERAFLEKLAEGLEV 277
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS------IDEEDLQYYHMLAKRRVLTG 361
++P S++ E +L+ + ++ + E+ + A++RV
Sbjct: 278 EIPPSMLRAEERHLLEHLAEDLYRQGISLEAYLEALKVKGELEKFQEDLRKEAEKRVRIA 337
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ + E+ N EV+EEE Q+ L + + + F + LA L+ + +DK
Sbjct: 338 LAREKLAEELNPEVSEEEWQAYLQAAARAYGVSVQDLRRQFGE--EGLARLKERLRQDKA 395
Query: 422 IDHILK 427
+ LK
Sbjct: 396 VQEALK 401
>gi|163786489|ref|ZP_02180937.1| peptidyl-prolyl cis-trans isomerase, trigger factor
[Flavobacteriales bacterium ALC-1]
gi|159878349|gb|EDP72405.1| peptidyl-prolyl cis-trans isomerase, trigger factor
[Flavobacteriales bacterium ALC-1]
Length = 440
Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats.
Identities = 71/464 (15%), Positives = 163/464 (35%), Gaps = 47/464 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + V I +D + + D R ANI GFR G VP+ +K YGK
Sbjct: 1 MNITRENIDALNAVVKVDIAKEDYSDKVEKILTDYRKSANIPGFRKGHVPMGMVKKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L + +++++++ + + L + P L +
Sbjct: 61 AVLVDEVNKLLQDALGKYLVEEKLDVLGNPLPKP-------QDDLDWDADAFSFEFELGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ +T D+K I+ Q+ I K + ++ + T +
Sbjct: 114 APEFDVKLKGKKAITHYNIVADDKMINNQIEHIQKQYGKIISQTEITQ-----DSEITGT 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD----------QKEIERFFPEDH 230
N E + + + +G K GD + +
Sbjct: 169 FVNEEKEINNSTTITLDKLKGKTNP---KKFIGAKVGDIITLKTKGLFNDDHDLMTFLKV 225
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
S D G + ++F++ EV ++ DL +L +KIK SE
Sbjct: 226 SHDDAHGLAIDVDFTVTEVNGRELADLDQDLFDKLFGPKAVTSVTELKEKIKADSEKQFA 285
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
Q+ +++L+ ++ + L E ++ + + EE +
Sbjct: 286 QQGDQKLLNDVTEYLVENTKFDL------------PAEFLQKWMQTAGEEEMSEEQAKEE 333
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPG------HEKKMLD 400
+ +++ + ++ G + +++N++V EEM++ + Q+ +F + +
Sbjct: 334 YEKSEKSMRYQLIEGKLIQEHNLQVQFEEMKAFSMEMIKGQMAQFGQMNPSEKELEDIAA 393
Query: 401 HFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ L + K+++ +++T+D
Sbjct: 394 RILSNQEEVKRLSEQLMSQKLLNLYKTEANTKTKEITYDDFVKE 437
>gi|317014205|gb|ADU81641.1| trigger factor [Helicobacter pylori Gambia94/24]
Length = 451
Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats.
Identities = 85/460 (18%), Positives = 208/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSIEDLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ L + P+ T E + ++
Sbjct: 61 QIDQDAQEEMIQEVLKNALKELGIETKDLIGSPNFTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++++ ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIQECVPSVGVEVPNEEKVNERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+G+ + + + L+G++ ++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGNKQMLEDFEKALLGMQASEEKEFPLTFPSGYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
GK+ + ++ + + +N++LA + E+A L +++K L
Sbjct: 231 TGKEALFKVKLHQIQAREALEINDELAKIVLSNEENATLELLKERVKGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKILFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQEGQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPESLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|313113271|ref|ZP_07798880.1| trigger factor [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624408|gb|EFQ07754.1| trigger factor [Faecalibacterium cf. prausnitzii KLE1255]
Length = 431
Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats.
Identities = 77/445 (17%), Positives = 172/445 (38%), Gaps = 25/445 (5%)
Query: 1 MQ-VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M+ V + E ++ L + N E R+ I+GF+ G+ + I++ G
Sbjct: 1 MKLVSVETPEKSVCKMTFSASPEELEAASNAVYERTRASYTIRGFKKGEADRAQIEADRG 60
Query: 60 KS-ILSETIDEIIKE----IVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKL 114
+ + I++++ + + +++ A P + + D
Sbjct: 61 EHTFWYDAINDLMDKDVPALYDAAMAEHSFVAVDNPVYDLVSVKKD---------EGFVA 111
Query: 115 RLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVT 174
+ + P++ ++ EV +KEID + + + G+ V
Sbjct: 112 TATVALQPELNLTKTTGFTAECVTPEVTDKEIDNVLERRRAAAAELVPHKGPAVKGNIVH 171
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+DY ++ + + KN +GS + E ++G K G++ EI FP + KD
Sbjct: 172 IDYEGLLEGKPFQGGTAKNQAVQLGSGRMIPGFEEGILGHKAGEEFEIFVTFPNRYHAKD 231
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKV 293
LAGK V + +V +N+D A + ++ +R Q++ +
Sbjct: 232 LAGKPVVFKIKLIDVCVRQIPALNSDFAKKVANVDTMDELRAQVKQQLHDGKHAGALNRA 291
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQY 349
K QIL +++ ++P LVE Y +++++ ++ ++ + E
Sbjct: 292 KDQILTQLADASEGELPSVLVETTYQQQMEQIQQQLQMQRLSLDRYLSQIHETRESFTAK 351
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A++ + L I ++ N+ TEE++ AL + R +++ + + +
Sbjct: 352 VRSSAEKTARVHMALLQIAQQENLVPTEEDIDKALAARAERAKKTLEEIKE-----KSDI 406
Query: 410 AELRAPIFEDKVIDHILKSVQIVDR 434
+R K D +++ I ++
Sbjct: 407 PAMRRNEGIRKAADWVIEHSTIEEK 431
>gi|222824463|ref|YP_002576037.1| trigger factor [Campylobacter lari RM2100]
gi|254788993|sp|B9KDZ7|TIG_CAMLR RecName: Full=Trigger factor; Short=TF
gi|222539684|gb|ACM64785.1| trigger factor [Campylobacter lari RM2100]
Length = 439
Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats.
Identities = 81/433 (18%), Positives = 169/433 (39%), Gaps = 17/433 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + V I + + + + GFR GKVP++ I Y K
Sbjct: 1 MEVTAKLIDFANANATVKIAQGAIKAEVEKLAKKASKTMKMDGFRAGKVPVAAILKRYEK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERA---AMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + ++++ V L + + A P + D G IE + L R
Sbjct: 61 ELTRDAEQDLLRNAVDGALKEVKKDAKDLVGEPYFE----KFDRKDGAIEAQMVLSFRPE 116
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+ + E + ++ ++ + GD D+
Sbjct: 117 VKL----DGYEELVPTYNTPKVTQKEIDAKKEELLKRFATPEAIKEDRALKEGDFAKFDF 172
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD + +N +GS E ++GLK G++K+I FP+++ LAG
Sbjct: 173 EGFVDGKAFDGGKAQNYVLEIGSKQFIPGFEEGMIGLKIGEEKDINVTFPKEYGATHLAG 232
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----RQK 292
K + E+ +N +L L E + K+K+ + +
Sbjct: 233 KDAVFKVKLHEIQELKLPELNEELLKSLLPEEKEPSVEKLEAKLKEQLKNEKIFKLINDE 292
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHM 352
+K Q + + K+ F +P+++VE E + + +S K ++ +E + +
Sbjct: 293 LKNQFAEALVAKFDFVLPKNIVEQETDMQFRSSLRNLSEEELKEFKDEAKYKEKRESFKE 352
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V ++ + + N+ V+++E+ A+Y + R+ + ++ LD+++K AL +
Sbjct: 353 DAQKSVKLTFIIDELAKLRNVTVSDQELIQAIYFEAYRYGFNPQEHLDNYKK-QGALPAI 411
Query: 413 RAPIFEDKVIDHI 425
+ + E+K+ I
Sbjct: 412 KMSLIEEKLFADI 424
>gi|187918470|ref|YP_001884033.1| trigger factor [Borrelia hermsii DAH]
gi|238689295|sp|B2S0V7|TIG_BORHD RecName: Full=Trigger factor; Short=TF
gi|119861318|gb|AAX17113.1| trigger factor, ppiase [Borrelia hermsii DAH]
Length = 448
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 86/443 (19%), Positives = 189/443 (42%), Gaps = 10/443 (2%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E + I + +NE ++D S+ IKGFR GKVP S I+ Y +I +
Sbjct: 7 VKLIPGSKVEAVIKISKEFVKGKYNEILQDYSSRLKIKGFRIGKVPFSIIEGKYSDNIRA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
TI+++I + + E + I + I+ D + + Y+ P+
Sbjct: 67 LTIEKLIHKSLEEFFKSATYKPLGYAVPKILD-----EKLEIDFNKDFEFTVVYEAYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY-TVSVDN 183
EI +++V V + +++ ++ + N + ++G V VD+ +
Sbjct: 122 EIPDISNVEVEIPEVTVSDSDVEDELKLLQLENAMVVDDSGDVKVGSIVRVDFVELDDSL 181
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
+ +++ F VG ++ + ++G+K ++K IE+ + D+ +LA RL
Sbjct: 182 SEILTTKRQDFVFTVGESNNYYGFDNDIIGMKKDEEKIIEKNYSADYKFSELANSFKRLK 241
Query: 244 FSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
IK++ +++D A + F + ++ + + + + ++L +
Sbjct: 242 IIIKDIKKRDIPELDDDFAKDIKDSFNTLEELKAHIRENMLRLVKEKRESLKLSKLLSDV 301
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
S K ++P ++ E E ++ + + +K + E + +++ +
Sbjct: 302 SEKLNIEIPSAMFEAELKNVVNEFSTQNKIDLKKLNDSSMGLEGVSDVFKENVLKKLKSK 361
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+V I + + E+T+ +++ L +Q ++ +Q+ N L L+ I KV
Sbjct: 362 LVFQKIVDNDLTEITDADLEDELVKQAEDTKMRLSEIKKFYQE-KNLLGILKDEIKRQKV 420
Query: 422 IDHILKSVQ-IVDRKVTFDQLFD 443
D ILK+V+ I +++ F +
Sbjct: 421 KDKILKNVKEIKLKEIAFRDFIN 443
>gi|308182951|ref|YP_003927078.1| trigger factor [Helicobacter pylori PeCan4]
gi|308065136|gb|ADO07028.1| trigger factor [Helicobacter pylori PeCan4]
Length = 451
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 87/460 (18%), Positives = 211/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSIENLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTV 175
+ P I + + + + +E++I+ ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKINERLKQLAKDYAKFVDADAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP ++ + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSEYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ ++++ + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLRQIQVREALEINDELAKIVLANEENAALKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQENQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEERIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|227432009|ref|ZP_03914029.1| cell division trigger factor [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352294|gb|EEJ42500.1| cell division trigger factor [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 431
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 76/434 (17%), Positives = 168/434 (38%), Gaps = 26/434 (5%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSETI 67
E + L+ I ++ + + + +++ +I GFR GKV +G+ + + +
Sbjct: 10 EKNQGTLEFEIARAQVEEGLEQAFQRNKNEVSIPGFRKGKVTKKLFFQKFGEEALYQQAM 69
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
D ++ + + RP+I L+ P I++
Sbjct: 70 DIVLPAAYEAAIDEAGITPVGRPNIEPVSM---------NKGEAWTLKAVVKTAPAIKLG 120
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYTVSVDNVI 185
+ +L+V EV + ++D ++ + ++E ++E GD V +D+ SVD V
Sbjct: 121 EYLNLEVEAQDEEVADADVDAEIKRLQDGQAELVLQEESVKAENGDTVVIDFDGSVDGVK 180
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ K+ +GS E LVG G+ + FPED+ DLAGK+ +
Sbjct: 181 FDGGQGKDSSLALGSGQFIPGFEEQLVGHTAGEDVNVNVTFPEDYQAADLAGKEALFEVT 240
Query: 246 IKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
I E+ ++++ A E+ + ++ S+K+ + + ++ +
Sbjct: 241 IHELKRKELPELDDEFAKDVDEEVETLAELKEKTSKKLADEKAQAAKAAFEDAVISKAVD 300
Query: 304 KY-------TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++ + V + + L +++ + S Q +++ + + A+
Sbjct: 301 NASVDGDEIPAEMIDEDVHRQIDQYLGQLQQQGISREMFFQISGQTEDDLHKQFEEGAET 360
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV TG+VL I I+ + E++ + ++ E K+ + L+ I
Sbjct: 361 RVKTGLVLEAIVAAEKIDPSAEQVSEEVASLAAQYNMEEDKVRAAISES-----MLKHDI 415
Query: 417 FEDKVIDHILKSVQ 430
+ I + S +
Sbjct: 416 AMREAIKKVTDSAK 429
>gi|317177375|dbj|BAJ55164.1| trigger factor [Helicobacter pylori F16]
Length = 451
Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats.
Identities = 87/460 (18%), Positives = 210/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVP+S +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSIENLEKRYDKIAQKIAQKVKIDGFRRGKVPISLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P+ T E + ++
Sbjct: 61 QIDQDAQEEMIQEVLKNAFKELGIENKDLIGSPNFTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIRECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP ++ + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSEYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLHQIQAREVLEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNDLYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|254526406|ref|ZP_05138458.1| trigger factor [Prochlorococcus marinus str. MIT 9202]
gi|221537830|gb|EEE40283.1| trigger factor [Prochlorococcus marinus str. MIT 9202]
Length = 473
Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats.
Identities = 73/436 (16%), Positives = 167/436 (38%), Gaps = 15/436 (3%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KS 61
V + ++ IPS NE I I A I GFR GK+P + G
Sbjct: 8 VKTTPLPQSRISFELEIPSETCKTCVNETISSISRSAKIPGFRVGKIPKQVLIQRIGITQ 67
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + +++II + E L + P + + LK+ L D+
Sbjct: 68 LHASALEKIIDKSWQEALKIKSIEPLSEPELVD---GFESLLANFSPEKSLKVTLQTDVA 124
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVDYT 178
P++++ L V + D K ID + + + V+
Sbjct: 125 PELKLKKSKGLSVEISKTKFDPKSIDEALEKSRNQFANIIPVTNRAARLGDIAVVSFKGK 184
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++ + +++ + + E +V +K GD K + FPED+S +D GK
Sbjct: 185 YKDSGKEIDGGTSESMDLELEKNKMIPGFVEGIVKMKIGDTKTLNLKFPEDYSHEDSRGK 244
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K++ +N+D A + ES ++ +++K + E + +
Sbjct: 245 EAIFEVNLKDLKEKELPELNDDFAKQSGNKESLKDLKKDIEKQLKDNFEKTQKDIKIEAL 304
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLAK 355
LD ++N+ ++P+S+++ E +++ + ++ + + + + A+
Sbjct: 305 LDALTNELVAEIPKSMIDIEVRNNIEQTAQRFAQQGLDVKSTFTPELVKSLAESTRPQAE 364
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ V + L + E NI+V ++E+ + K++ +
Sbjct: 365 KNVQRNLALKALAETENIKVEKDEIDLKMKDYEDAISQSSKQI-----DIKKLTEVISND 419
Query: 416 IFEDKVIDHILKSVQI 431
+ ++K+I + ++ ++
Sbjct: 420 LLKEKLIIWLEENSEV 435
>gi|317180558|dbj|BAJ58344.1| trigger factor [Helicobacter pylori F32]
Length = 451
Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats.
Identities = 86/457 (18%), Positives = 207/457 (45%), Gaps = 16/457 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSVENLEKRYDKIAQRIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + +E+I+E++ + + S + + ++ +
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIE-------NKDLIGSSNLTKFEKKDTHFEIEADIGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYT 178
P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+D+
Sbjct: 114 KPTIVLDKIKECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTDTQRKAQNDDKLTIDFE 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+DN E +N I+GS + + + L+G++ G++KE FP + + LAGK
Sbjct: 174 GFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSGYHAEHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVRQKV 293
+ + ++ + + +N++LA + E+A L ++++ L +++
Sbjct: 234 EALFKVKLHQIQAREALEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYNEEL 293
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQYYHM 352
K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 294 KEKLIENLDEKIVFDLPKTIIEQEMDLLFRNDLYSMQAEEVKSLQESQEKAKEKRESLRN 353
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A + V ++ + ++ I V + E+ LY + + + +++ ++K N LA +
Sbjct: 354 DATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NMLAAV 412
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
+ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 413 KMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|218463456|ref|ZP_03503547.1| trigger factor [Rhizobium etli Kim 5]
Length = 309
Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats.
Identities = 104/253 (41%), Positives = 161/253 (63%)
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
E + + + ++GS + LVG+K G++K I FP D+ K+LAGK + +
Sbjct: 1 FEGGTDQGAELVIGSGRFIPGFEDQLVGVKAGEEKTITVTFPADYPAKNLAGKDATFDIT 60
Query: 246 IKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
+K+V +P V +N++LA +LG ES ++ + +I+ L RQK+KRQILD + Y
Sbjct: 61 VKDVAAPGAVEINDELASKLGIESADRLKEIVRGQIESQYGSLTRQKLKRQILDQLDEMY 120
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLG 365
FD P SLV+ EYNGI +V +++ + + ++ D+ +E+ + Y LA+RRV G+VL
Sbjct: 121 KFDTPASLVDAEYNGIWSQVNNDLAQSGKTFEDEDTTEEKAREEYKTLAERRVRLGLVLS 180
Query: 366 TIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHI 425
IGEK +EVTE+EMQ A+Y QL ++PG EK++L+ F+ P A A +RAPIFE+KVIDH+
Sbjct: 181 EIGEKAGVEVTEDEMQRAIYDQLRQYPGQEKQILEFFRSQPGAAASIRAPIFEEKVIDHL 240
Query: 426 LKSVQIVDRKVTF 438
L + + D+KVT
Sbjct: 241 LTEIDVTDKKVTK 253
>gi|308062115|gb|ADO04003.1| trigger factor [Helicobacter pylori Cuz20]
Length = 451
Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats.
Identities = 88/460 (19%), Positives = 212/460 (46%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANACLSAKPSVENLEKRYDKIAQKIAPKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ L + P+ T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNALKELGIENKDLIGSPNFTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP ++ + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQAGEEKEFPLTFPSEYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ ++++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLRQIQAREALEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDGKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKREG 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ +++ N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRRN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|317009195|gb|ADU79775.1| trigger factor [Helicobacter pylori India7]
Length = 451
Score = 150 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 86/461 (18%), Positives = 212/461 (45%), Gaps = 22/461 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSTKPSIENLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + + P++T E + ++
Sbjct: 61 QIEKDAQEEMIQEVLKDAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++I+ ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKINERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+G+ + + + L+G++ G++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGNKQMLEDFEKALLGMQAGEEKEFPLTFPSGYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ ++++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLRQIQAREVLEINDELAKIVLANEENAALKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPESLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKTQA 450
>gi|297622839|ref|YP_003704273.1| trigger factor [Truepera radiovictrix DSM 17093]
gi|297164019|gb|ADI13730.1| trigger factor [Truepera radiovictrix DSM 17093]
Length = 479
Score = 150 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 70/501 (13%), Positives = 172/501 (34%), Gaps = 55/501 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + + + V +P+ +TD++ + ++ + + GFRPGK P I++ GK
Sbjct: 1 MQTQMLEKDAHRAKFKVSVPAEAVTDTYERVLRELARQVRVPGFRPGKAPRGVIEARVGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E D +++ +P+ + + + + + + +
Sbjct: 61 DAVAQEVRDALVRLHLPQAVRELSLTPIAQ----------RVHAHEPVEGEAYSFEVDVE 110
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++ + ++ + + + E+ + + + + + E +E GD + ++
Sbjct: 111 LYPEVTLPELSEIVIDTEKPPLTEEMVQEAIENLQRQHATLIPVERPAEAGDHLVLELAG 170
Query: 180 SVDNVILE------DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI- 232
+ L + + D T + + G+ E+E D S
Sbjct: 171 GEEGSTLPVDLDAVSPAFAEQLYGKAIGDEVEVTLDQPDENEAGEDAELEAARAADTSEE 230
Query: 233 ----------------KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGL 276
+ A L IK++ + ++ A LGF + + +
Sbjct: 231 PAAVDAETDANTGAGSNEGAATPPTLRVVIKDIKAKELPERGDEFAQTLGFATWAEVEAR 290
Query: 277 CSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKS 336
+ + E + + + ++ + VP+SL E +LQ + ++
Sbjct: 291 VRESLAAQLEQEAFSAQREEFTEKLTLESNPHVPQSLKERRKAVLLQNLARDLEGRGLSM 350
Query: 337 QNVDSIDEEDLQ------YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGR 390
Q +++ + A+ V +VL + E +++ E ++AL +
Sbjct: 351 QAYLEKLDQEEKRAEFEAELEEAAENAVKRDLVLEKLLETRGTRLSDAEFEAALAFMAQQ 410
Query: 391 FPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
K+ + LA R + DK + + +L +++
Sbjct: 411 QGSTPAKLRQELGE--QGLANYRFLLTRDKAVRE------------SLRELLGADADA-E 455
Query: 451 EKLLDKSSKVETFQSEEAPSE 471
S + +E+A SE
Sbjct: 456 TAPETAVSVTSSGAAEDASSE 476
>gi|327398621|ref|YP_004339490.1| Trigger factor [Hippea maritima DSM 10411]
gi|327181250|gb|AEA33431.1| Trigger factor [Hippea maritima DSM 10411]
Length = 448
Score = 150 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 93/459 (20%), Positives = 200/459 (43%), Gaps = 18/459 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+V + + +++L + + R+ + +E + D+R IKGFR GKVP I Y +
Sbjct: 3 EVAVEDVKPSRKKLHIKVEPERIKEKKDEIVNDLRKTVKIKGFRKGKVPKEIILRSYKQD 62
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I E++ E + A P T + + L D+
Sbjct: 63 IEDNIKRELMAESYEFAIEDNKIDAVSDPVFT---------EVVYDEDKGLSFTAMVDVK 113
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET---ESEIGDKVTVDYT 178
PQ E+ + +++T E+ E+ I+ + ++ + E K+ E + +
Sbjct: 114 PQFELKEYKGIEITAKPIEITEESINDVLNQLREAFATLEDKDGDTFEEGDIGIIDLKTF 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
N + + +N+ +G L E L G+K G+ K+IE F +D+ ++ L GK
Sbjct: 174 TQKTNYPINEFGGENLPVELGKKQLIEEIESQLKGMKVGETKKIEASFDKDYPLRALKGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V ++K + ++++ A + F++ ++ K+K++ E ++ K +
Sbjct: 234 DVVFEVTLKSLKQKKLPEIDDEFAKKINKEFKNVDDLKEDIRNKLKENKEREEIERQKDE 293
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + ++Y FD+PESLV E N ++ + EM + + ++ + + AK+
Sbjct: 294 LLKKLLDEYDFDLPESLVNQEANQMIMEYVKEMYYRGADVSSEEFKPQKLRERFEPEAKK 353
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV + +L I +K ++V+ EE+ + Q + + + +Q+ L ++ I
Sbjct: 354 RVKSTFILLEIAKKERLDVSNEEINQVIAQDANARRMNFEDVYKEYQE-KGVLPVIQMEI 412
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
DK +D + K+ +I++ + + E+ ++ +
Sbjct: 413 LGDKALDLLHKNAKIIEEN---QEAQKEAKENETKEDKE 448
>gi|223040053|ref|ZP_03610334.1| trigger factor [Campylobacter rectus RM3267]
gi|222878639|gb|EEF13739.1| trigger factor [Campylobacter rectus RM3267]
Length = 438
Score = 150 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 89/447 (19%), Positives = 176/447 (39%), Gaps = 23/447 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ K + + IPS + + I GFR GKVP++ + Y K
Sbjct: 1 MQITTKVIDTANASISAKIPSAEVKSKLENLAKKAAKNMKIDGFRAGKVPVNVVLKRYEK 60
Query: 61 SILSETIDEIIKEIVPEILSKRD---ERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ ++ E +K+ + L + + E P E + IE
Sbjct: 61 ELTADAEQEAVKDAIDAGLKELNRKFEEVIGEPVFDKFERGENEIDARIE---------- 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVD 176
P I I +++L + V +KEID + EI K E E + E GD D
Sbjct: 111 ISFKPVINIDGYEELIESVSTPRVTKKEIDERKNEILKMMAPLEKIEKAALEKGDFAKFD 170
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ VD E +N +GS + ++GLK G +++++ FP ++ LA
Sbjct: 171 FEGFVDGAAFEGGKAENYLLEIGSGQFIPGFEDGMIGLKVGQERDVKVKFPAEYGAAHLA 230
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH------SEFLVR 290
GK + E+ ++ ++ E + ++ + V
Sbjct: 231 GKDATFKVKLHEIQGKKVPEEIDEETLKQVMPGEEKVSVELFEERLKEQIKADKHAKNVN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQY 349
+++K + + I K+ FDVP+++VE E + + + K + + +
Sbjct: 291 EELKPKFAEAIVAKFNFDVPKNIVEQEMDMQFRGAWSGFTPEQMAKFREDKDALAKQRET 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
Y A + V ++ + + NI+V+++E+ A+Y + R K+ L+++ K L
Sbjct: 351 YRDDAVKSVKLTFIIDELARRRNIKVSDQELIQAVYFEAYRSGVDPKQHLENY-KNQGIL 409
Query: 410 AELRAPIFEDKVIDHILK-SVQIVDRK 435
++ + E+K+ + + ++K
Sbjct: 410 PAIKMSMIEEKLFNEMFALKSDKKEKK 436
>gi|317011010|gb|ADU84757.1| trigger factor [Helicobacter pylori SouthAfrica7]
Length = 451
Score = 150 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 90/460 (19%), Positives = 209/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L L +++ + I K I GFR GKVPLS +KS Y
Sbjct: 1 MNLEVRKIDTANARLSAKPSIEDLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKSRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERA---AMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + +E+ +EI+ L + A P+ T E + ++
Sbjct: 61 QVEQDAQEEMFQEILKNALKELGIEAKDLIGSPNFTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTV 175
+ P I + + + + E+++D ++ + AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEVPSEEKVDERLKQFAKDYAKFIDTDAQKKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP D+ ++ L
Sbjct: 171 DFEGFIDNAPFEGGKAQNFSLILGSKQMLEDFEKALLGMQAGEEKEFSLTFPSDYHVEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L +++K L
Sbjct: 231 AGKEALFKVKLHQIQAREVLEINDELAKIVLANEENATLDLLKERVKGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKILFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQENQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEALMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ + L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYFLDKNLSKEQQEILEKMRPNAQKTQ 449
>gi|168701665|ref|ZP_02733942.1| trigger factor [Gemmata obscuriglobus UQM 2246]
Length = 503
Score = 150 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 73/476 (15%), Positives = 179/476 (37%), Gaps = 17/476 (3%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDI--RSKANIKGFRPGKVPLSHIKSLYGK 60
V K K+ + V + + D FNE+ ++ + ++GFRPGK P I+ Y
Sbjct: 35 VEIKDIGPCKKHVKVTVDRKAIDDRFNEKFTELTLSEEPQVRGFRPGKAPRKMIEKRYYT 94
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ E +++ + ++ ++ P N I ++
Sbjct: 95 TVADEIKSQVLMASLEQLADEQAISPLSPPEFDPN-------LVNIPKEGPFVYEFDIEV 147
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ + L++ + +E+ + + K++ V
Sbjct: 148 RPEFDLPEYKGLKLRRPTHTYTAEEVANEKKRLLDPYGQIVPKDSGVAELYDVISADVAI 207
Query: 181 VDNVILEDQSKKNVQFIVG----SADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
++ + + S + ++ + + G K+GD + ++ ++ + + L
Sbjct: 208 SFQGKEINKLDEVQVKVEPQLALSDGVAADFGKTMAGAKSGDVRVVDITLSQETATEQLR 267
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
G+ V+ F++K+V + + +DL G + A L + + E+ R+ +
Sbjct: 268 GQTVQAQFTVKDVKTTRQPELTSDLLESAFGVSTPEAFTELVEAVLNRRLEYTQRRVARE 327
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
Q+L I+ +++P+ ++ + L + EM +A + + Q
Sbjct: 328 QVLQQIAAAAAWELPQDMLRKQARKTLARKVMEMRNAGMSDEQIRGRSRILEQDVLKSTA 387
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ VL I E IE+ E+++ + + + + +K+ +K + + + A
Sbjct: 388 EALKEHFVLQKIAEVEKIEIEEDDIDTEIDRIADQSGESPRKVRARLEK-EDLMEAVAAD 446
Query: 416 IFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ E K +D IL S D ++ + ++ E+ + + EA +
Sbjct: 447 LLERKALDLILGSATYEDYELNSE--AQQGEVATVEQAVLPDAPAPAPAEGEAKGD 500
>gi|157414261|ref|YP_001485127.1| trigger factor [Prochlorococcus marinus str. MIT 9215]
gi|166988053|sp|A8G7G0|TIG_PROM2 RecName: Full=Trigger factor; Short=TF
gi|157388836|gb|ABV51541.1| FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
[Prochlorococcus marinus str. MIT 9215]
Length = 476
Score = 150 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 73/438 (16%), Positives = 169/438 (38%), Gaps = 15/438 (3%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KS 61
V + ++ IPS NE I I A I GFR GK+P + G
Sbjct: 8 VKTTPLPQSRISFELEIPSETCKTCLNETISSISRSAKIPGFRVGKIPKQVLIQRIGITQ 67
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + +++II + E L + P + + LK+ L D+
Sbjct: 68 LHASALEKIIDKSWQEALKIKSIEPLSEPELVD---GFESVLANFSPEKPLKVTLQTDVA 124
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVDYT 178
P++++ L V + D K ID + + + V+
Sbjct: 125 PELKLKKSKGLSVEISKTKFDPKSIDEALQKSRSQFANIIPVTNRAARLGDIAVVSFKGK 184
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ ++ + +++ + + E +V +K GD K + FPED+S +D GK
Sbjct: 185 YKDSDKEIDGGTSESMDLELEKNKMIPGFVEGIVKMKIGDTKTLNLKFPEDYSHEDSRGK 244
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K++ +N+D A + ES ++ +++K + E + +
Sbjct: 245 EAIFEVNLKDLKEKELPELNDDFAKQSGNKESLKELKKDIEKQLKDNFEKTQKDIKIEAL 304
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLAK 355
LD ++N+ ++P+S+++ E +++ + ++ + + + + A+
Sbjct: 305 LDALTNELVAEIPKSMIDIEVRNNIEQTAQRFAQQGLDVKSTFTPELVKSLAESTRPQAE 364
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ V + L + E NI+V ++E+ + K++ +
Sbjct: 365 KNVQRNLALKALAETENIKVEKDEIDLKMKDYEDAISQSSKQI-----DIKKLTEVISND 419
Query: 416 IFEDKVIDHILKSVQIVD 433
+ ++K+I + ++ ++ +
Sbjct: 420 LLKEKLIIWLEENSEVKE 437
>gi|32266065|ref|NP_860097.1| trigger factor [Helicobacter hepaticus ATCC 51449]
gi|41018184|sp|Q7VIN8|TIG_HELHP RecName: Full=Trigger factor; Short=TF
gi|32262114|gb|AAP77163.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Helicobacter hepaticus ATCC 51449]
Length = 442
Score = 150 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 86/437 (19%), Positives = 190/437 (43%), Gaps = 20/437 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K ++ I +++ + F + I+ I I GFR GKVP IK+ Y +
Sbjct: 1 MNFTTKRINSANAVINGSIALSKIEEKFEKVIKKIAKNIKIDGFRKGKVPTQVIKTRYKE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERA---AMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + E I+E++ L + + + P I+ +D I+
Sbjct: 61 QIDQDAQQEAIQELLTAALKELEIQPNSLIGNPMISQFNKLNDKIELEIKLG-------- 112
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTV 175
I P + + + +D + + + ID ++ EIAKN E + D +
Sbjct: 113 --ITPTLNLDNVEDYTPEVKLKTISKNLIDERLEEIAKNRAPLNEITQERTLQKDDTAQI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ VD E +N +GS + L+G+K G+++ I+ FPE + K L
Sbjct: 171 DFEGFVDGKAFEGGKGENFNLAIGSNQFIPGFEDALIGMKNGEKRTIKVTFPEQYQAKHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKV 293
AGK+ + ++ ++ ++++ A + E + +++ + ++++ + + K
Sbjct: 231 AGKEASFDVTLHKILQKELPKIDDEFAKSIAGEESNLQSLKDMIKEQLEMEQKTEIYNKE 290
Query: 294 -KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKS-QNVDSIDEEDLQYYH 351
K ++++ + +FD+P+ +VE E + + + ++ +N ++ + +
Sbjct: 291 LKEKLVEILLKNISFDLPDLIVEQEMDILFRNALSQLKPEEFDKIKNNQDEAKKQRETHK 350
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++ V ++ + +K NI + + E+ +Y + K L+H+QK N +
Sbjct: 351 DEARKSVQITFIMDALAKKYNIAINDNEVLQTIYYEAMMMGQDPKATLEHYQKN-NLVPA 409
Query: 412 LRAPIFEDKVIDHILKS 428
++ + ED+V+ ++L
Sbjct: 410 IKMTMLEDRVLHYLLDK 426
>gi|254779231|ref|YP_003057336.1| trigger factor [Helicobacter pylori B38]
gi|254001142|emb|CAX29100.1| Trigger factor (TF) [Helicobacter pylori B38]
Length = 451
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 87/460 (18%), Positives = 209/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSIENLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDADAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ ++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFNLILGSKQMLEDFEKALLGMQASEEKEFPLTFPSGYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLHQIQAREVLEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDKKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|307637484|gb|ADN79934.1| Cell division trigger factor [Helicobacter pylori 908]
gi|325996074|gb|ADZ51479.1| Cell division trigger factor [Helicobacter pylori 2018]
gi|325997670|gb|ADZ49878.1| Cell division trigger factor protein [Helicobacter pylori 2017]
Length = 451
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 87/460 (18%), Positives = 207/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSIEYLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ L + P+ T E + ++
Sbjct: 61 QIDQDAQEEMIQEVLKNALKELGIETKDLIGSPNFTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++++ ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIQECVPSVGVEVPNEEKVNERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ ++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFTLILGSKQMLEDFEKALLGMQASEEKEFPLTFPSGYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + +N++LA + E+A L +++K L
Sbjct: 231 AGKEALFKVKLCQIQVREALEINDELAKIVLANEENATLELLKERVKGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKILFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V V+ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFVIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 VAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|193211952|ref|YP_001997905.1| trigger factor [Chlorobaculum parvum NCIB 8327]
gi|238692668|sp|B3QQT5|TIG_CHLP8 RecName: Full=Trigger factor; Short=TF
gi|193085429|gb|ACF10705.1| trigger factor [Chlorobaculum parvum NCIB 8327]
Length = 427
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 86/444 (19%), Positives = 181/444 (40%), Gaps = 24/444 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ +++L++I+ + +++++E+ R IKGFR G VP+ +K + G
Sbjct: 1 MQKNITNVSDTEQQLEIILTAEEYQPEYDQQLEEARRSIKIKGFRQGHVPVGMLKKMIGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +E +++ + I + A R I G +L +++SY+I
Sbjct: 61 SLEAEVAEKMASKHFSAIADEEKINPASRAQIDSFNF----------GDGELTIKISYEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ TQ V +++++R++ I K + E + GD + D T
Sbjct: 111 HPEFELKDLSAYSFTQAEYSVTDEDVEREIKLILKGHGTMVTIEEAAGEGDTLIGDVTKL 170
Query: 181 V-DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D +E+ +N F + + L G K GD E+ E+ G+
Sbjct: 171 DADGNAVENGKNENHHFNLEYLPADNPFRMALEGRKAGDSVEVNVEPKEE------GGEA 224
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+R +KEV ++++L FE+ + + +++ H Q +
Sbjct: 225 IRYRVDVKEVKRLELPELDDELVKEITQQRFENVTDFKADVKLQLQAHFTDKSEQDLLEA 284
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ + ++ P+++V + N +L+ + +M KS N + E L+ A++
Sbjct: 285 MSAKLIEEHPVPTPKAMVASFQNMLLENAKRQMGGQFPKSLN----EAEFLETLKPNAEK 340
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+V I ++N + VT+E++++ ++ + P + L + I
Sbjct: 341 HARWLLVSQKIAKENELNVTDEDIKAYAEKEAEKEPSLTVEQLVSTYMSTEFKDYIIDTI 400
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQ 440
++K+ D I V I +
Sbjct: 401 LKEKIYDVIKSKVTITKEATPIPE 424
>gi|85057614|ref|YP_456530.1| trigger factor, PPIase [Aster yellows witches'-broom phytoplasma
AYWB]
gi|119370881|sp|Q2NJE2|TIG_AYWBP RecName: Full=Trigger factor; Short=TF
gi|84789719|gb|ABC65451.1| trigger factor, PPIase [Aster yellows witches'-broom phytoplasma
AYWB]
Length = 431
Score = 149 bits (376), Expect = 7e-34, Method: Composition-based stats.
Identities = 74/441 (16%), Positives = 186/441 (42%), Gaps = 21/441 (4%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SI 62
K K + + S L + E I+SK IKGFR G VP ++ +GK ++
Sbjct: 2 KIKKINNQKVQYFFKVSSKELETQLSSAYEKIKSKVEIKGFRKGHVPRKIFENHFGKNNL 61
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
S+ ++ I++ EIL K+D + P + D+ ++ + L + + P
Sbjct: 62 YSDALENIVQTKYQEILQKKDFESMGMPQV------IDLNEKKLKDNQNFTFGLEFIVKP 115
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYTVS 180
++ + + L++T+D EV + E++ ++ + + E + E+ D D+
Sbjct: 116 KVILKKYLGLEITKDELEVKDCEVEEKINSLLEKQATLESKTQNNSLELTDTAVFDFEGF 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E + KN +GS + ++G+K G K+I FP D+ K LA KKV
Sbjct: 176 VDEKPFEGGTAKNFSLKIGSGQFLPGFEDQMLGMKQGQNKDINITFPSDYHQKKLANKKV 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLA---VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ ++ + + ++L + ++ + + + ++ +K+Q+
Sbjct: 236 IFKVTLHQIKTKKIPQLTDNLVKLLKLANVSTVEELKNNTKKTLLDQKKHKEKENIKKQV 295
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
++ + +P+ ++ E + ++ ++ N + DE+ + ++
Sbjct: 296 IEQLVKNSELQIPQEIISQEKTHLQKEFEKQLKQQNLTLEQYKQYLGIGDEKMEKEFNQQ 355
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++ + +++ + + + +++E+++ + ++ + + L+
Sbjct: 356 AQKNLQYRLIIEQVAFQEKLTISKEKIEQQYKNLSNHYKVPVNQIKQNLPE-----KNLQ 410
Query: 414 APIFEDKVIDHILKSVQIVDR 434
+ D+ +D ++ +V +
Sbjct: 411 HSLLMDEALDLVINKAVVVTK 431
>gi|261415787|ref|YP_003249470.1| trigger factor [Fibrobacter succinogenes subsp. succinogenes S85]
gi|261372243|gb|ACX74988.1| trigger factor [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302327501|gb|ADL26702.1| trigger factor [Fibrobacter succinogenes subsp. succinogenes S85]
Length = 419
Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats.
Identities = 90/426 (21%), Positives = 183/426 (42%), Gaps = 17/426 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K + R L++ IP L F +++ + + +KGFR G+VP S I +G
Sbjct: 1 MSAEIKETSATVRTLEITIPQGDLKVPFEKKLSQYKKQVALKGFRQGQVPKSMILKQFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI E +DE++ IV E L K + + + + D+ L++ ++
Sbjct: 61 SIRHEAVDEVVNSIVQEELKKANIIPVGK---------MLVKDFNDDEKSDITLKVEVEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I+I + D +T V E+E+ + + + E + E++ GD V DY
Sbjct: 112 DPEIDIKGYADTGITVPATAVHEEEVQAEFDRLMQMWSKDEHVDREAKKGDVVVGDYIEV 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V + ++ + + E L+G K GD+KEI +P+DH + GK
Sbjct: 172 VIDGEKQELPENKEFRSLLGESASPGFDEGLMGSKAGDKKEINFKYPDDHKDERYRGKTA 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ N IK+V +P ++ + ++G + E+ +R ++ + + + K + +D
Sbjct: 232 QFNVEIKDVREIVPPTLDEEFCKQIGVKDEADLRNNLAESLAAQKKDAAKNKAINEAIDK 291
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ F+VP++ + +++ ++ Q ++V EE + A R +
Sbjct: 292 LIEANPFEVPKARI-------YDLIKWTLNRNAQSEKDVVEPTEEQINELSGEAIREIKK 344
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
+L + + I+ T+ + L Q + + + +HF++ + +LR +
Sbjct: 345 HRILEFVATQEKIKPTQALVDERLQQMANAYHVEFENLKNHFRQS-GRINQLRDELRFQM 403
Query: 421 VIDHIL 426
D I+
Sbjct: 404 AADFIV 409
>gi|203288046|ref|YP_002223061.1| trigger factor [Borrelia recurrentis A1]
gi|226738674|sp|B5RPV6|TIG_BORRA RecName: Full=Trigger factor; Short=TF
gi|201085266|gb|ACH94840.1| trigger factor [Borrelia recurrentis A1]
Length = 448
Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats.
Identities = 83/444 (18%), Positives = 181/444 (40%), Gaps = 10/444 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
K G K E + I + +NE ++D S+ +KGFR G+VP S I+ Y +I
Sbjct: 6 NVKLMPGSKVEAVIQISKEFVKAKYNEILKDYSSRLKVKGFRTGRVPFSIIEGKYSDNIR 65
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+ I+ +I + + E + I + I D + Y+ P+
Sbjct: 66 ALAIENLIHKSLEEFFESAIYKPLSYAVPKILD-----EKLEINFDKDFEFTFVYESYPE 120
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY-TVSVD 182
EIS + +V + + +I+ ++ + N ++G V VD+ +
Sbjct: 121 FEISDISNFKVEIPEVVISDSDIEDELKLLQFENSIIVEDNGSVKVGSIVRVDFVELDDS 180
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ +++ VG +D + ++G+K ++K +E+ + D+ +LA RL
Sbjct: 181 LNEILATKRQDFVLTVGESDDYYGFGYDIIGMKKDEEKIVEKNYGSDYKFSELANTSKRL 240
Query: 243 NFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+K++ +++ A + + +R + + + + ++L
Sbjct: 241 KIGVKDIKRRDIPELDDAFAKDVKDSLNTLEDLRDYVRENMLRVVQEKTNSLKLSKLLSG 300
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
I+ K DVP S+ E E ++ + + + QN + E + ++ +
Sbjct: 301 IAEKVNIDVPSSMFEAELKNVINEFSHQNKINITQLQNSSTGLEGVNDVFKENVLNKLKS 360
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
+V + + ++ EVTE ++++ L +Q + + +++ N L+ I K
Sbjct: 361 KLVFQKMVDNDSSEVTELDLENELIKQAQNLKMAPQDVKKFYKE-RNLFGLLKDEIKRQK 419
Query: 421 VIDHILKSV-QIVDRKVTFDQLFD 443
V + IL+ + +I KV+F +
Sbjct: 420 VKEKILQDLEEIKLEKVSFRDFVN 443
>gi|307566217|ref|ZP_07628665.1| trigger factor [Prevotella amnii CRIS 21A-A]
gi|307345075|gb|EFN90464.1| trigger factor [Prevotella amnii CRIS 21A-A]
Length = 455
Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats.
Identities = 59/455 (12%), Positives = 155/455 (34%), Gaps = 17/455 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + + + + + N+ ++D R +ANI GFRPG+VP+ +K YG
Sbjct: 1 MNISFENPDKINGLMTITVEEADYREEVNKTLKDYRKRANIPGFRPGQVPMGLLKRQYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + +++++ E + + + + +P + +G D +E I
Sbjct: 61 QIKMDVVNKLLGENLQKYIVDNKIQVLGQPMASEKQGAVD-----LEKEAPYTFMFDLAI 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD--YT 178
P+ + + ++ EVD+K ID+Q+ ++ E +
Sbjct: 116 APEFKAALSGKDKIDFYEIEVDDKLIDQQVEMYQNRAGHYDKAEDFDIEKRDMLKGDLRE 175
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + LE ++ + + G K GD + +++
Sbjct: 176 LDANGNTLEGGITVEGAVLMPQYIKVEDQKNLFKGAKLGDIITWNPRAAYPDNDTEVSSL 235
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I + ++ + + K E R+ + +
Sbjct: 236 LKINKEEIANHTGDFSYQITEISRFVKAENNKELWENVYGKDAKIEDEAAFRKVIADGLA 295
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + L + + + E N + ++ + + + +
Sbjct: 296 SQLEIDSNYKFIQDLRSHMEKKVGKLEFPEALLKRIMIANNKDKGADFVEKNYEGSIKEL 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF----QKYPNA 408
++ + E N+I+V +++++ + Q ++ + L+++ K
Sbjct: 356 TWHLIKEHLAEANDIKVEDKDVRESAIQMARTQFAQYGMTNVPDEYLNNYADEMLKKHEN 415
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ E K+ D + V++ + V+ D+
Sbjct: 416 VDSFVEAALERKLADKLKGVVKLNKKTVSLDEFNK 450
>gi|289548354|ref|YP_003473342.1| trigger factor [Thermocrinis albus DSM 14484]
gi|289181971|gb|ADC89215.1| trigger factor [Thermocrinis albus DSM 14484]
Length = 431
Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats.
Identities = 88/439 (20%), Positives = 181/439 (41%), Gaps = 14/439 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+V + EGL + L V + + + + E + +R A I+GFR G+ PL I++ Y
Sbjct: 4 KVSVEEREGLFKALSVEVEGDVVKRALEEVYQHLRENAQIEGFRKGQAPLWLIRARYRDY 63
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I E ++ + + + + + + E E T L R+S+++
Sbjct: 64 IEEEVGKKVADATLSAAIEESKLKPVADIYLEEVKLE--------ELTGRLTYRVSFEVP 115
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
PQ E++ + +++ E EK + Q+ + + + +E E E+ GD V ++Y ++
Sbjct: 116 PQFELAQIEGMEIEIPKVEYSEKMLQEQIERLREEHAVWEPVEREAREGDLVVIEYEITD 175
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
+ + + + G E + L+G K GD+ +E D + GK
Sbjct: 176 KETGEKVKGETSGVL--GQKIFREEVEKSLLGKKEGDEVRVEDVDVYD-PSGKMVGKADM 232
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
LP ++ ++ ++IK E L R+ V + + +
Sbjct: 233 TIRIKGVKEKVLPEPNDDFARELKLGDTWQEALKKLEEEIKARLEDLRREMVMKAVASKL 292
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ FD+P++ V E + +L++ ++ + ++ VD + + A V
Sbjct: 293 LQMHQFDLPQTEVMREVSYLLRQRLGQLEAMGIDTRYVD--VRKMAEELLPQASANVKLR 350
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+L ++ IEVTEEE++ + +Q R +M Q+ LR + +K
Sbjct: 351 YILDRYAQEKQIEVTEEELKKEIDEQAKRSGVSPDEMRKFLQE-RGLEEVLRRDVIRNKA 409
Query: 422 IDHILKSVQIVDRKVTFDQ 440
++ I+ V I + + D+
Sbjct: 410 LEDIMSKVVIKEVEEKEDE 428
>gi|86130755|ref|ZP_01049354.1| FKBP-type peptidyl-prolyl cis-transisomerase [Dokdonia donghaensis
MED134]
gi|85818166|gb|EAQ39326.1| FKBP-type peptidyl-prolyl cis-transisomerase [Dokdonia donghaensis
MED134]
Length = 440
Score = 149 bits (375), Expect = 9e-34, Method: Composition-based stats.
Identities = 60/460 (13%), Positives = 160/460 (34%), Gaps = 39/460 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + L + V I + + +++ R ANI GFR G VP+ +K YG
Sbjct: 1 MNITKEQIDDLNAVVKVEIVKDDYNEKVESILKNYRKTANIPGFRKGHVPMGMVKKQYGM 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + +++I++E + + L + P D +
Sbjct: 61 AVRVDEVNKILQEALGKFLQEEKLDVLGNP-------LPKNQEDFNWDAEDYNFEFELGM 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +++ +T +VD+K +D Q+ I K + ++ + +
Sbjct: 114 APKFDVNLKPKKAITSYKIKVDDKMVDSQVTTIRKQYGKLISQTEVAKDSEVTGTFASEK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD------QKEIERFFPEDHSIKD 234
+ ++ ++ +KT + ED +
Sbjct: 174 AGIDNQATFEIEQLKGKKNVDAFVGAKPGDVITVKTKSLFSEPATYQAALKISEDEAKDL 233
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
A L + K + L + + L + +S + ++ + ++ Q++
Sbjct: 234 NAEVTFTLTETNKREQADLDQELFDKLFGKDVVKSATELKDKIKEDGERQFTQQSDQQLM 293
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+ + + ++ FD+P + +K E + + +
Sbjct: 294 NDVTERLIDETKFDLPSDFLARWIQSTGEKPMTEEEAKEEF----------------TRS 337
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPG------HEKKMLDHFQK 404
++ + ++ G + +N ++VT +E++ + Q+ ++ +
Sbjct: 338 EKGLRWQLIEGKVVTENELQVTFDELKDYSKDMIKAQMMQYGQMNPEEKELDDIAARILG 397
Query: 405 YPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ L + K++ ++V++ +++VTFD+
Sbjct: 398 NQEEVKRLSEQLMNVKMLTFFKENVKLKEKEVTFDEFVKE 437
>gi|118474311|ref|YP_892813.1| trigger factor [Campylobacter fetus subsp. fetus 82-40]
gi|166229030|sp|A0RRI0|TIG_CAMFF RecName: Full=Trigger factor; Short=TF
gi|118413537|gb|ABK81957.1| trigger factor [Campylobacter fetus subsp. fetus 82-40]
Length = 435
Score = 149 bits (375), Expect = 9e-34, Method: Composition-based stats.
Identities = 94/444 (21%), Positives = 181/444 (40%), Gaps = 21/444 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + ++ L + I GFR GKVP++ + YGK
Sbjct: 1 MEVKAKLLNTANAAAQTEVKASELNAKVENLAKKAAKNIKIDGFRKGKVPVAQVLKRYGK 60
Query: 61 SILSETIDEIIKEIVPEILS---KRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ ++ EI ++IV E L K+ P I E ++ + L
Sbjct: 61 DLENDAKSEIFRDIVNESLKLIAKKSSDIIGEPMI----------LKFDEKDGNIDIELE 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVD 176
P++++ ++++ +V +KEI+ ++ E K E E ES E GD D
Sbjct: 111 ISFKPEVKVDGYEEIIPEYTTPKVTKKEIEEKINEFLKMIAPLEKVEKESLEKGDFAKFD 170
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ VD E + +GS + ++GLK G+QK++ FP ++ LA
Sbjct: 171 FEGFVDGEAFEGGKAEGYLLEIGSGQFIPGFEDGMLGLKVGEQKDVNVTFPAEYGAAHLA 230
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQK---- 292
GK + E+ ++ + +L E+ +IK+ QK
Sbjct: 231 GKSAVFKVKLHEIQGKKAGKLDEETLKKLMPNEENPTAEQLEDRIKEQIRADKFQKLLNE 290
Query: 293 -VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQYY 350
+K + D K+ FD+P ++VE E + + S K + ++ + Y
Sbjct: 291 DLKPKFADKAVEKFKFDLPNNIVEQEIDMQFRSAWGNFSEDEMKKFREDKEALKKQRETY 350
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A + V ++ + ++ I V++ E+ A+Y + R+ K+ L+ ++K L
Sbjct: 351 KNEAIKSVQLTFIIDELAKQKGITVSDNELLQAVYFEAYRYGIDPKEHLESYKK-QGMLP 409
Query: 411 ELRAPIFEDKVIDHILKSVQIVDR 434
++ + E+K+ +++ KS D+
Sbjct: 410 AVKMAMIEEKLFNNLFKSGNREDK 433
>gi|57168632|ref|ZP_00367764.1| trigger factor [Campylobacter coli RM2228]
gi|57019913|gb|EAL56593.1| trigger factor [Campylobacter coli RM2228]
Length = 444
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/434 (19%), Positives = 173/434 (39%), Gaps = 18/434 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP++ + Y K
Sbjct: 1 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKNVKMDGFRPGKVPVAAVLKRYQK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERA---AMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + + K V L + + A P + D G I + L +
Sbjct: 61 ELTQDAEQNLFKSAVDSALKELKKEAKELVGEPYFE----KFDRKDGEIVAELALSFKPE 116
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+ + + + E + ++ + + GD D+
Sbjct: 117 FKL----DGYEKLIPEYQTPKVTKKEIDEKKEELLKRFATPEAIKTKRALKEGDFAKFDF 172
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
VD + +N +GS E +VG+K G++K+I+ FP+++ LAG
Sbjct: 173 EGFVDGKAFDGGKAENYVLEIGSKQFIPGFEEGMVGMKIGEEKDIKVTFPKEYGAAHLAG 232
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----RQK 292
K + E+ +++++ +L E A + +K+K+ + +
Sbjct: 233 KDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDE 292
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQYYH 351
+K + D + KY FD+P+ +VE E + ++ S + + +E +
Sbjct: 293 LKAKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDSFK 352
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++ V ++ + + IEV ++E+ A+Y + R+ + K+ L++++K AL
Sbjct: 353 EEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKK-QGALPA 411
Query: 412 LRAPIFEDKVIDHI 425
++ + E+K+ + I
Sbjct: 412 VKMALIEEKLFNDI 425
>gi|317182105|dbj|BAJ59889.1| trigger factor [Helicobacter pylori F57]
Length = 451
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 88/460 (19%), Positives = 212/460 (46%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L + L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANACLSAKLSVENLEKRYDKIAQRIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP ++ + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQAGEEKEFLLTFPSEYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLHQIQAREVLEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNDLYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTRQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|298736498|ref|YP_003729024.1| trigger factor [Helicobacter pylori B8]
gi|298355688|emb|CBI66560.1| trigger factor [Helicobacter pylori B8]
Length = 451
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 86/460 (18%), Positives = 209/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSIENLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ ++N E +N I+GS + + + L+ ++ G++KE FP + + L
Sbjct: 171 DFEGFINNAPFEGGKAENFSLILGSKQMLEDFEKALLDMQAGEEKEFPLTFPSKYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLHQIQAREVLEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPESLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|152991608|ref|YP_001357329.1| trigger factor [Sulfurovum sp. NBC37-1]
gi|166229947|sp|A6Q674|TIG_SULNB RecName: Full=Trigger factor; Short=TF
gi|151423469|dbj|BAF70972.1| trigger factor [Sulfurovum sp. NBC37-1]
Length = 427
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 76/431 (17%), Positives = 174/431 (40%), Gaps = 11/431 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + I + + + ++ + + + GFR GKVP +K L+G
Sbjct: 1 MKVEVKKIDDANVAVQGNIENKVVEANVDKLAREAGKQMKVDGFRKGKVPPHVVKKLHGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + ++ ++ + + A I + +++++ +S
Sbjct: 61 KLQQDAEGDALRSLIDLGVKEAGINTA-----DILGEPIFKKYDKKDEGIEVEVEISLRP 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+ E + E E + + ++ GD V +D+
Sbjct: 116 TIEAEGYEKAVPAFEKPEATEKEVEEKLEEIAAQQAPFEKIKRKRMVRDGDTVVIDFEGF 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD V E + +GS E ++G+K ++K I FPE++ K+LAGK+
Sbjct: 176 VDGVAFEGGKAEKFSLKIGSGQFIPGFEEQIIGMKYDEEKTITVAFPEEYQSKELAGKEA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCSQKIKQHSEFLVRQKV-KRQ 296
+ E+ +P +N+ LA +L + + ++ ++I + + K +
Sbjct: 236 EFKVKLHEIQEQVPAELNDALAQKLLQDEKATLDTLKEKLKEQIVNEKTSKIYNEELKPK 295
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQYYHMLAK 355
I++ + + F +P ++VE E + + EMS + E + A+
Sbjct: 296 IIEALVAHFDFALPNNIVEQEIDAKINAKAREMSEEELNDFKENPEKVEALREELREEAE 355
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
V ++ + +K ++ V ++E+ A+Y + +++++++QK N L ++
Sbjct: 356 NSVKATFIVDALAKKEDVNVDDQEVSQAIYYEAMMSGQDPQQVIEYYQKN-NLLPAVKMG 414
Query: 416 IFEDKVIDHIL 426
+ EDK+ +L
Sbjct: 415 MIEDKLFGKLL 425
>gi|46091990|dbj|BAD14288.1| trigger factor [Thermus thermophilus]
Length = 404
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 73/426 (17%), Positives = 167/426 (39%), Gaps = 39/426 (9%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSETI 67
G ++ V +P++R+ S+ ++D+ S+ + GFRPGK PL +++ G+ +L +
Sbjct: 8 SGYLVKVRVEVPADRVKASYEALLKDLASRVRVPGFRPGKAPLKVVEARLGREALLQDLK 67
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
+ +++E PE + + + + + + + P++ +
Sbjct: 68 ERLVEETYPEAVRELGLSPVA----------ARVVEQDLSEGEGFRYVAEVENYPEVRLP 117
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ + EV E+ +++ + E+ + E E++ D + V
Sbjct: 118 DWRSFALEVSPPEVTEEMVEKALEELRQRYAELVPVEREAQEKDHLFVRTE--------- 168
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ +F + A E L+G K GD + + K + +
Sbjct: 169 ----EGAEFPIDLAKALPHVREALLGKKAGDVVMVPVLNDKG-------EKVREVRTEVL 217
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
EV + ++ + A L ES ++ + +K+ +E + +R L+ ++
Sbjct: 218 EVKTLKLPELDEEFAKTLEAESLEDLKNRVRESLKRQAERAYEEARERAFLEKLAEGLEV 277
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS------IDEEDLQYYHMLAKRRVLTG 361
++P S++ E +L+ + ++ + E+ + A++RV
Sbjct: 278 EIPPSMLRAEERHLLEHLAEDLYRQGISLEAYLEALKEKGELEKFQEDLRKEAEKRVRIA 337
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ + E+ N EV+EEE Q+ L + + + F + LA L+ + +DK
Sbjct: 338 LAREKLAEELNPEVSEEEWQAYLQAAARAYGVAVQDLRRQFGE--EGLARLKERLRQDKA 395
Query: 422 IDHILK 427
+ LK
Sbjct: 396 VQEALK 401
>gi|288818083|ref|YP_003432431.1| trigger factor [Hydrogenobacter thermophilus TK-6]
gi|288787483|dbj|BAI69230.1| trigger factor [Hydrogenobacter thermophilus TK-6]
gi|308751685|gb|ADO45168.1| trigger factor [Hydrogenobacter thermophilus TK-6]
Length = 429
Score = 149 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/440 (18%), Positives = 185/440 (42%), Gaps = 14/440 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + EGL +EL V + + ++ E +++R +I+GFR G P+ IK+ Y
Sbjct: 1 MKVSMREREGLFKELSVEVEGDIVSSILEEVYKNLRESVSIEGFRKGTAPMWIIKARYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E + +P + + + + + E E + R++++
Sbjct: 61 YIQEEVGKRVADRTLPSAIEESKLKPVADIYLEEVKLE--------EAVPKVIYRVAFET 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ + LQV E DE+ + +++ ++ + + ++ E E GD V+VDY
Sbjct: 113 PPEFELKELEGLQVEVKKVEFDEELVKKRIEQLREEHAIWQPVEREIREGDLVSVDY--Y 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ + + ++ IVG E LVG K G++ E D K+ AGK
Sbjct: 171 IEEMESGESTQGETSGIVGQRMFREEIDTALVGRKEGEEVTFEDLTLYDTEGKE-AGKAK 229
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
LP + ++ ++ Q++K E + R V+ +
Sbjct: 230 VRLIIKSVKEKVLPEIGDDFAKELGIAQTWQEAEEKIRQEVKDSVERIKRALVEESVAKK 289
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + FD+P++L+ E + +++ E+S ++ ++ + + A +
Sbjct: 290 LVEMFEFDIPQTLLAREVSHLVEIRARELSQYGIDTKYLNY--KSMAEELMPQAMFNIKL 347
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
+L ++ ++V+EE++Q + ++ +++ ++F+ N L + +K
Sbjct: 348 RYILEKYAKEKGLQVSEEDLQKKYQEIAQQYGRSVEEIKEYFRS-QNMENVLFEDVLREK 406
Query: 421 VIDHILKSVQIVDRKVTFDQ 440
+ I+ I + + D+
Sbjct: 407 AFNDIISKAVIKEVEEKKDE 426
>gi|257784418|ref|YP_003179635.1| trigger factor [Atopobium parvulum DSM 20469]
gi|257472925|gb|ACV51044.1| trigger factor [Atopobium parvulum DSM 20469]
Length = 474
Score = 149 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 64/441 (14%), Positives = 171/441 (38%), Gaps = 22/441 (4%)
Query: 1 MQVIEKFSEGLKRELDV--IIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLY 58
M + + + +L V +P+ + + + +DI +K + +GFR G+ P I +
Sbjct: 1 MNITVTADKPVDEKLTVKVTVPAAEVDAAIKQAYKDIANKYSFQGFRKGRAPRPVIDGIV 60
Query: 59 GKS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
G+ +L++ ++++ P++L + D R G+ + + L D +
Sbjct: 61 GREAVLAQATNDLLGAAEPQLLEELDLVPVGR-------GDYNQDADLPVEGQDYSYEVV 113
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+++ P+ ++ S+D + E E EID Q+ ++ FE + + + + T+
Sbjct: 114 FNVRPEAKLDSYDAPAINMPPNEATEAEIDHQIKQLLSYQAKFENTKEKRAVKEGDTIGV 173
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ ++ + E E L+G+K G++KE++ H ++
Sbjct: 174 DIKNIEGA-AHMEGEDRVLTLNGTQAPKELEEALIGMKPGEEKEVKWTHSHTHG-DEVHS 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+N + + + ++LA +++ +R +I+ + + + +
Sbjct: 232 HDYDINVKVVAHKKSVTPELTDELAKNTFGYDTVEKLREAVKSEIESDKKNSLPTLKEDR 291
Query: 297 ILDY-----ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+++ ++ + + L ++ + S + ++ +
Sbjct: 292 VVEAVGKRLQLDEVPEEYKNEVFNEIAQEFLNGLQQQGMSLDMFLSARGIKTDDFIADLR 351
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ A+ R + L + + +E TEE++++ + P E + + + L
Sbjct: 352 VQAEERARQSLSLDAMAAELKLEATEEDIRAEFER--AGVPNVETAIEEW--RKAGRLPA 407
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
+R I K +D + + +
Sbjct: 408 IRESIRRSKALDWLRDNATVT 428
>gi|203284512|ref|YP_002222252.1| trigger factor [Borrelia duttonii Ly]
gi|226738672|sp|B5RMG0|TIG_BORDL RecName: Full=Trigger factor; Short=TF
gi|201083955|gb|ACH93546.1| trigger factor [Borrelia duttonii Ly]
Length = 448
Score = 149 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 84/444 (18%), Positives = 180/444 (40%), Gaps = 10/444 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
K G K E + I + +NE ++D S+ +KGFR G+VP S I+ Y +I
Sbjct: 6 NVKLMPGSKVEAVIQISKEFVKAKYNEILKDYSSRLKVKGFRTGRVPFSIIEGKYSDNIR 65
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+ I+ +I + + E + I + I D + Y+ P+
Sbjct: 66 ALAIENLIHKSLEEFFESAIYKPLSYAVPKILD-----EKLEINFDKDFEFTFVYESYPE 120
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY-TVSVD 182
EIS + +V + + +I+ ++ + N ++G V VD+ +
Sbjct: 121 FEISDISNFKVEIPEVVISDSDIEDELKLLQFENSIIVEDNGSVKVGSIVRVDFVELDDS 180
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ +++ VG +D + ++G+K ++K +E+ + D+ +LA RL
Sbjct: 181 LNEILATKRQDFVLTVGESDDYYGFGYDIIGMKKDEEKIVEKNYGSDYKFSELANTSKRL 240
Query: 243 NFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+K++ +++ A + + +R + + + + ++L
Sbjct: 241 KIGVKDIKRRDIPELDDAFAKDVKDSLNTLEDLRDYVRENMLKVVQEKTNSLKLSKLLSG 300
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
I+ K DVP S+ E E ++ + + + QN + E + ++ +
Sbjct: 301 IAEKVNIDVPSSMFEAELKNVINEFSHQNKINITQLQNSSTGLEGVNDVFKENVLNKLKS 360
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
+V + + ++ EVTE ++++ L +Q + + + K N L+ I K
Sbjct: 361 KLVFQKMVDNDSSEVTELDLENELIKQAQNLKMAPQDVKKFY-KERNLFGLLKDEIKRQK 419
Query: 421 VIDHILKSV-QIVDRKVTFDQLFD 443
V + IL+ + +I KV+F +
Sbjct: 420 VKEKILQDLEEIKLEKVSFRDFVN 443
>gi|312885606|ref|ZP_07745242.1| trigger factor [Mucilaginibacter paludis DSM 18603]
gi|311301918|gb|EFQ78951.1| trigger factor [Mucilaginibacter paludis DSM 18603]
Length = 449
Score = 149 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 76/467 (16%), Positives = 163/467 (34%), Gaps = 39/467 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + L L + + + I+D KA I GFRPG VP SHIK +YGK
Sbjct: 1 MNITQEKIDNLNSILTITLQPEDYNPRVEKTIKDQAKKAKIAGFRPGMVPPSHIKRMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SIL E ++ ++ + + +S+ + +P I+ + T + + +
Sbjct: 61 SILVEEVNSLLNDSLTNYISENNIDVLGQPLPKIDR----EKEFNWDFTDNFEFNYEMGV 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ I + T+ + + DE + ++ I + + ++ + +S
Sbjct: 117 APEFTIDISSKDKATEYVIKADEATLAERIKNIRRGYGKMTNPDVSADDDVLYSELKQLS 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH---------- 230
D + ED + E L+GLK D + D+
Sbjct: 177 ADGSVFEDGISNTASIRLDQIKN-EEVKASLIGLKKDDVITFDIQKAFDNDAAKVAALLK 235
Query: 231 -SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+ A K ++K V +N + +L E KI + E ++
Sbjct: 236 IEEDEAADLKSDFQLTVKNVNRLEESDLNQEFFDKLFGEGTVTTEEEFRAKITEEVEGMM 295
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
Q R++ + + N V L + D + +EDL
Sbjct: 296 VQDSDRRLQNDLYNLVMDKVNFELPDEFLKR-------------WLLATNDKLTQEDLDK 342
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGHE------KKML 399
+ + + ++ I + N IE+ +E+ + L Q + +
Sbjct: 343 DYDNFAKNLKWTLIENKIVKDNEIEIKYDEVFALAKQRLDAQFRMYSPQPLSDEQLGQYT 402
Query: 400 DHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ + ++ + K +D++ V + ++++ ++ +
Sbjct: 403 VQYLQNKENGNKIFEELKALKTLDYLKTVVTLDKKEISSEEFAKLPA 449
>gi|315586541|gb|ADU40922.1| trigger factor [Helicobacter pylori 35A]
Length = 451
Score = 149 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 87/460 (18%), Positives = 211/460 (45%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPL+ +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSVENLEKRYDKIAQRIAQKVKIDGFRRGKVPLNLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTV 175
+ P I + + + + +E++I+ ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIRECVPSVGVEIPNEEKIEERLKQLAKDYAKFVDTDTQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ G++KE FP ++ + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFSLILGSKQMLEDFEKALLGMQAGEEKEFLLIFPSEYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + VN++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLHQIQAREVLEVNDELAKIVLANEENAALKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNDLYSMQAEEVKSLQENQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPENLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYLLDKNLPKEQQEILEKMRPNAQKTQ 449
>gi|21674746|ref|NP_662811.1| trigger factor [Chlorobium tepidum TLS]
gi|25453301|sp|Q8KB57|TIG_CHLTE RecName: Full=Trigger factor; Short=TF
gi|21647958|gb|AAM73153.1| trigger factor [Chlorobium tepidum TLS]
Length = 426
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 86/439 (19%), Positives = 173/439 (39%), Gaps = 24/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ + +EL++I+ + +++++E+ R IKGFR G VP+ +K + G
Sbjct: 1 MQKNITNVSEIAQELEIILTAEEYQPEYDQQLEEARKSVRIKGFRQGHVPVGMLKRIIGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI +E +++ + I + A R I L +++SY+I
Sbjct: 61 SIEAEVAEKMASKYFAAIAEEEKINPASRAQIESYNY----------EDGKLTIKISYEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ F + TQ + ++++DR++ I + + E + GD V D T
Sbjct: 111 HPEFELKDFSEYTFTQAEYTISDEDVDREIKLILRGHGTMVTSEDAAAEGDTVIGDVTKL 170
Query: 181 V-DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D +E +N F + + L G K GD ++ E+ G+
Sbjct: 171 DADGADIEGSKNENHHFNLEYLPADNPFRMALEGKKAGDVVDVTVKPKEE------GGET 224
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
R IKEV ++++L FE R +++ H +
Sbjct: 225 NRFRIEIKEVKHLELPELDDELVKEISQQRFEKVEDFRNDIRLQLQAHFSDKSEYDLLEA 284
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I + ++ P ++V + N +L+ + ++ K + + E A++
Sbjct: 285 ISSKLIEEHPVPTPSAMVAHFQNILLENAKRQVGGQFPKGFD----EREFFNAMKPNAEK 340
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
++ I ++NN+EVT+E++++ ++ + P L + + I
Sbjct: 341 HARWLLISQKIAKENNLEVTDEDIKAFAEKEAEKEPSLTVDQLLNTYLSTEFKDYIIDTI 400
Query: 417 FEDKVIDHILKSVQIVDRK 435
++K+ D I V I
Sbjct: 401 LKEKIYDVIKSKVTITKEA 419
>gi|55980583|ref|YP_143880.1| trigger factor [Thermus thermophilus HB8]
gi|81364437|sp|Q5SKM9|TIG_THET8 RecName: Full=Trigger factor; Short=TF
gi|55771996|dbj|BAD70437.1| trigger factor [Thermus thermophilus HB8]
Length = 404
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 73/426 (17%), Positives = 167/426 (39%), Gaps = 39/426 (9%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSETI 67
G ++ V +P++R+ S+ ++D+ S+ + GFRPGK PL +++ G+ +L +
Sbjct: 8 SGYLVKVRVEVPADRVKASYEALLKDLASRVRVPGFRPGKAPLKVVEARLGREALLQDLK 67
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
+ +++E PE + + + + + + + P++ +
Sbjct: 68 ERLVEETYPEAVRELGLSPVA----------ARVVEQDLSEGEGFRYVAEVENYPEVRLP 117
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ + EV E+ +++ + E+ + E E++ D + V
Sbjct: 118 DWRSFALEVSPPEVTEEMVEKALEELRQRYAELVPVEREAQEKDHLFVRTE--------- 168
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ +F + A E L+G K GD + + K + +
Sbjct: 169 ----EGAEFPIDLAKALPHVREALLGKKAGDVVMVPVLNDKG-------EKVREVRTEVL 217
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
EV + ++ + A L ES ++ + +K+ +E + +R L+ ++
Sbjct: 218 EVKTLKLPELDEEFAKTLEAESLEDLKNRVRESLKRQAERAYEEARERAFLEKLAEGLEV 277
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS------IDEEDLQYYHMLAKRRVLTG 361
++P S++ E +L+ + ++ + E+ + A++RV
Sbjct: 278 EIPPSMLRAEERHLLEHLAEDLYRQGISLEAYLEALKEKGELEKFQEDLRKEAEKRVRIA 337
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ + E+ N EV+EEE Q+ L + + + F + LA L+ + +DK
Sbjct: 338 LAREKLAEELNPEVSEEEWQAYLQAAARAYGVAVQDLRRQFGE--EGLARLKERLRQDKA 395
Query: 422 IDHILK 427
+ LK
Sbjct: 396 VQEALK 401
>gi|323343311|ref|ZP_08083538.1| trigger factor [Prevotella oralis ATCC 33269]
gi|323095130|gb|EFZ37704.1| trigger factor [Prevotella oralis ATCC 33269]
Length = 452
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 57/464 (12%), Positives = 160/464 (34%), Gaps = 38/464 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + + + + ++ + ++D R KAN+ GFRPG+VP+ IK +G
Sbjct: 1 MKISFENPDKVNGLMTITVEEADYKENVEKTLKDYRKKANVPGFRPGQVPMGLIKRQFGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + I++ + E + + + + P + + D +E +
Sbjct: 61 SVKMDAINKFVGEQIYKYVQDNKIQMLGEPLPSEKQQPQD-----LEKDAPYTFVFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ I ++ +D+K ID Q+ A ++E E + +
Sbjct: 116 APEFHIELNGKNKIDYYNITIDDKLIDHQVDMFASRMGSYEKTEKYVDNDMLKGDLRELD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD-----------QKEIERFFPED 229
E ++ + + ++ G K GD + + E
Sbjct: 176 AKGNTKEGGLTVEGAVLMPNYIKVDKQKKLFDGAKLGDIITFNPRKAYPESDTEIASLLK 235
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+ + ++ I E+ V+ +L + + KI + + +
Sbjct: 236 IDRDHVKDYEGNFSYQITEISHYKKHDVDQELFDNVFGKGAVKSEAEFRAKIVEGLKAQL 295
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + + V + + + + +N
Sbjct: 296 TVDSGYKFLQDVRDYCEKKVGKLTYPDALLKRVMLNNNKDKGQEFVDKNY---------- 345
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF- 402
+ +++ ++ + +NI+V ++++++A + ++ + + +D++
Sbjct: 346 --PESIKQLTWHLIKEQLVAAHNIKVDDKDIKNAARETARVQFAQYGMNNVPDEYVDNYV 403
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K + + K+I + + V++ +++++ D
Sbjct: 404 TELLKKRENVDGFVDRAVDIKLIASLKEIVKLNEKEISMDDFNK 447
>gi|326693801|ref|ZP_08230806.1| trigger factor [Leuconostoc argentinum KCTC 3773]
Length = 431
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 75/436 (17%), Positives = 170/436 (38%), Gaps = 26/436 (5%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSETI 67
+ + L+ I ++ + + + +++ ++ GFR GKV + S +G+ + E +
Sbjct: 10 QKNQGTLEFEISRAQVEEGLEQAFQRNKNQVSVPGFRKGKVTKALFFSKFGEEALYQEAM 69
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
D I+ + + RP+I +L+ P IE+
Sbjct: 70 DIILPAAYEAAIEEAGITPVGRPNIEPVSM---------NKGEAWQLKAEVTTAPAIELG 120
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYTVSVDNVI 185
+ +L+V EV + ++D ++ + + + ++E GD V +D+ SVD
Sbjct: 121 DYLNLEVEAADTEVSDADVDAEIKRLQEGQAELVLQEADVKAENGDTVVIDFDGSVDGDH 180
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ +GS + LVG G++ ++ FPE++ DLAGK
Sbjct: 181 FAGGQANDFALTLGSGQFIPGFEDQLVGHTAGEEVDVHVTFPEEYQAADLAGKDALFEVK 240
Query: 246 IKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
I E+ ++++ A E+ + ++ QK+ + + + ++
Sbjct: 241 IHELKRKELPELDDEFAKDVDEEVETLAELKEKTRQKLSEQKAEAAQAAFEDAVITKAVE 300
Query: 304 KYT---FDVPESLVENEYNGILQKVRFEMS----SANQKSQNVDSIDEEDLQYYHMLAKR 356
+ ++PE+++E + + + + ++ S + Q +++ + + A
Sbjct: 301 NASVDGDEIPEAMIEEDVHRQIDQYLGQLQQQGISRDMFFQISGQTEDDLHKQFEEGAAT 360
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV T +VL I + I+ TEE++ + ++ ++ L+ I
Sbjct: 361 RVKTNLVLEAIVKAEGIDPTEEQITEEVNNLAAQYNMDPAQIRATLSDS-----LLKHDI 415
Query: 417 FEDKVIDHILKSVQIV 432
+VI I S +
Sbjct: 416 AMREVIKKITDSAKAK 431
>gi|206900773|ref|YP_002250809.1| trigger factor [Dictyoglomus thermophilum H-6-12]
gi|206739876|gb|ACI18934.1| trigger factor [Dictyoglomus thermophilum H-6-12]
Length = 431
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 82/438 (18%), Positives = 179/438 (40%), Gaps = 20/438 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-K 60
+ + +G + +++V + + S +++ + + GFR G P ++ G +
Sbjct: 9 KYEIEKLQGSRIKVNVEVDAKEREQSLERAYKNLVKRYQVPGFRKGYTPRPVLEKYLGSE 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E I + ++I+ IL P D+ + +LK + +I
Sbjct: 69 AFEDEAIRIVARDILNMILKNEKLTPLQDPYF-------DLLPEGWKENENLKFSIVIEI 121
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ ++ + ++ EV E+E+DR + +I E S V
Sbjct: 122 PPEFKLGNYKGFSIKREKIEVSEEEVDRVIEQIELQLSKLNSVEDGSVEKGDVVYLEREK 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D L + + + + E L+G+K G++K IE FPED K++AG+ +
Sbjct: 182 EDGTQLP------PLWFTLNGQMLPDLEEKLIGMKVGEEKIIEVNFPEDFYEKEIAGQTL 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
L + +K+++ ++ S R + I++ E L + ++ +ILD
Sbjct: 236 PLKWRVKKIWRYEKP-DEETFLQKVNANSLEEFRERVKESIREERERLEKDRLFAEILDK 294
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML----AKR 356
I D P S V IL++ E++ ++ + + + A+R
Sbjct: 295 ILETTELDPPLSYVHYLAENILKEFLSELNKKGLNLEDYLAQRGINRDEFVNNVIEDARR 354
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R+ ++L I E NI+V+EEE+++ + + K++ + + L+ +
Sbjct: 355 RIKIEMILDKIAEVENIDVSEEEVENVIKEIAENEGKDYKEIRREL-EREGTINTLKRNM 413
Query: 417 FEDKVIDHILKSVQIVDR 434
+KV + ++K + +
Sbjct: 414 LREKVREFLIKENVVEEE 431
>gi|148976476|ref|ZP_01813182.1| trigger factor [Vibrionales bacterium SWAT-3]
gi|145964299|gb|EDK29555.1| trigger factor [Vibrionales bacterium SWAT-3]
Length = 191
Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 94/200 (47%), Gaps = 9/200 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E DL ++++
Sbjct: 61 AVRQDVMGEVMQRHFIEAIVKEKINPAGAPTFAPVEN---------NEGADLVFNATFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++E+ +++ V + EV + +++ + + K + +T ++ G + T+D+ S
Sbjct: 112 YPEVELKGLENITVEKPAVEVKDADVEEMIETLRKQQATWTEVDTAADAGSRATIDFVGS 171
Query: 181 VDNVILEDQSKKNVQFIVGS 200
+D E +N +G+
Sbjct: 172 IDGEEFEGGKAENFPLEMGA 191
>gi|148284322|ref|YP_001248412.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Orientia tsutsugamushi str. Boryong]
gi|146739761|emb|CAM79620.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Orientia tsutsugamushi str. Boryong]
Length = 496
Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 102/470 (21%), Positives = 211/470 (44%), Gaps = 21/470 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSH-------- 53
Q+IE SEGL++ + IP++ + D ++++ + ++AN+ GFR K
Sbjct: 3 QIIELQSEGLEKHFQISIPASVIKDKTDQKVISLTARANVPGFRKFKSGSHITSKAMQVK 62
Query: 54 ---IKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGT- 109
I+ Y SI ++ +++I V ++ + PSI IN+ S +
Sbjct: 63 QLQIRRQYEASIRNDVQNDVIVAAVKSLIKSNNFSLIGDPSIKINDDSSIEVNSEQNSNA 122
Query: 110 --VDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES 167
D+++ + + + P+I+I F + + + I + E+ ++ + + ++ +
Sbjct: 123 EEKDIRVDVKFTVYPEIKIPDFSQITLKKHIIQCTEESVNEFINGLRNEVYEYKDCSEQE 182
Query: 168 EIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLF-SETTEILVGLKTGDQKEIERFF 226
+ + +++ +ED +K++++FI+GS L + E G Q +I
Sbjct: 183 KAIKGSKLVIDIAITGDGIEDHNKEDIEFILGSGKLISKDIEERFTDSIVGSQLDISTTL 242
Query: 227 PEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSE 286
P+++ AGK L ++K++ P+ + + + S ++ + +
Sbjct: 243 PDNYHDSKAAGKLANLRVTVKKIQQPVL-ITEQQILDKYKVTSIDELKVKVKELQNKEFM 301
Query: 287 FLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKS---QNVDSID 343
L + ++ ++L+ + +D+P+ L+++EYN + Q V + N S D
Sbjct: 302 GLSQILLRARLLNQLDKMLDYDLPKLLLKSEYNVVRQNVLAALKDNNNNGIKVALDKSSD 361
Query: 344 EEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ 403
+ QY +A RRV TG+ + +K NI VT+EE L Q L + ++ +
Sbjct: 362 HDIEQYCQFIATRRVRTGLFVLHYADKKNITVTDEEKNMILLQYLNKGKEEANAIMHAYN 421
Query: 404 KYPNAL-AELRAPIFEDKVIDHILKS-VQIVDRKVTFDQLFDNSSESSPE 451
L + E KVI+HIL++ VQIV+ T D++ + E S +
Sbjct: 422 NNLRWLSNSIAMEAKEIKVINHILENEVQIVEEPCTSDEIEGFADEISKD 471
>gi|221194447|ref|ZP_03567504.1| trigger factor [Atopobium rimae ATCC 49626]
gi|221185351|gb|EEE17741.1| trigger factor [Atopobium rimae ATCC 49626]
Length = 479
Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 64/442 (14%), Positives = 172/442 (38%), Gaps = 20/442 (4%)
Query: 1 MQVIEK--FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLY 58
M + + K + V IP+ + + + +DI +K + +GFR GK P I S+
Sbjct: 1 MNITVTADKPKDQKLAVKVTIPAADVDAAVKQAYKDIANKYSFQGFRKGKAPRPVINSVV 60
Query: 59 G-KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
G ++L++ ++++ P++ + D R G+ +E D ++
Sbjct: 61 GYDAVLAQATNDLLGTAEPQVFEELDLVPIGR-------GDYGKDDNFVEEGKDYTYEVT 113
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+++ P ++ S+D +T E + EIDRQ+ + +E + + + +
Sbjct: 114 FNVRPDAQLDSYDAPAITMPPEEATDAEIDRQIKTLLSYQTTYEDTKEKRAAKEGDVISV 173
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
V + + + + E + L+G+K G++KEI+ H + +
Sbjct: 174 DVENIEGA-AHMAGEGRTITLDGTQIPEEFQKELIGMKPGEEKEIKWTHSHTHGDEVHSH 232
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ + P + ++ GF++ + +R ++I+ + + + ++
Sbjct: 233 DYDIKVKFVAHKKAVTPELTDDLAKKNFGFDTVAKLRDAVKEEIENDKKNSLPTLKEDRV 292
Query: 298 LDYI-----SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHM 352
++ + ++ + + L ++ + ++ + ++ ++
Sbjct: 293 VEEMGKRLQLDEVPAEYKNEIFNEIAQEFLNNLQRQGATLDMFLAARGIKTDDFIKDLQE 352
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A R + L + +I+ T++++++ + EK + + + L +
Sbjct: 353 QADERARQSLALDAVARNQDIKATDDDVRAEFEK--AGVKDVEKTIEEW--RSAGRLPAI 408
Query: 413 RAPIFEDKVIDHILKSVQIVDR 434
R I K +D + + Q+ +
Sbjct: 409 RESIRRSKALDWLRDNAQVTVK 430
>gi|194337549|ref|YP_002019343.1| trigger factor domain [Pelodictyon phaeoclathratiforme BU-1]
gi|238693407|sp|B4SFE7|TIG_PELPB RecName: Full=Trigger factor; Short=TF
gi|194310026|gb|ACF44726.1| trigger factor domain [Pelodictyon phaeoclathratiforme BU-1]
Length = 426
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 82/441 (18%), Positives = 177/441 (40%), Gaps = 25/441 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ K ++EL++I+ + +N+ +E+ + IKGFR G P S IK L G
Sbjct: 1 MQKNIKNVSETEQELEIILSAEEFGTEYNQELEEAKRNIQIKGFRKGHAPASLIKKLAGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI + +++ + EI + A R I + +LK+ L+Y+I
Sbjct: 61 SIEATVAEKMASKYFGEIADAEKIKPASRAQIIDVAFAPE----------ELKITLAYEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD-YTV 179
P+ E+ F TQ+ + +++I R++ I K + + + D V D Y +
Sbjct: 111 HPEFEVKDFSGYTFTQNRYVITDEDITREINLILKGHGTLNTVDEAALSTDTVIGDVYKL 170
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ +DQ N F + + + L G K G+ +IE E + +
Sbjct: 171 NEAGETDDDQKTDNHHFTLEYLPEENPFRKALTGKKAGESVDIENDEKE-------SAQP 223
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRL---GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
R I E+ + ++L + FES + +++QH +++
Sbjct: 224 SRFRVVISEIKRLELPELTDELVKEITGGRFESVTDFTADVRIQLEQHFLLKSDEELLES 283
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ + + P S++ + +L+ + +M + K + DE+ A++
Sbjct: 284 LSAKLIEENPVPAPNSMIASFSKMLLENAKRQMGGSFPKGFD----DEQFRLAMKPNAEK 339
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
++ I E + V+++++++ ++ + + + + P + I
Sbjct: 340 HAQWLMISQKIAEDATLSVSDDDIKAYADKEAEKSESMDAEEILKTYLSPEFRDYITDTI 399
Query: 417 FEDKVIDHILKSVQIVDRKVT 437
++K+ + I V I + + +
Sbjct: 400 LKEKIYNIIKSKVTITEEEKS 420
>gi|123967078|ref|YP_001012159.1| trigger factor [Prochlorococcus marinus str. MIT 9515]
gi|166229917|sp|A2BZ41|TIG_PROM5 RecName: Full=Trigger factor; Short=TF
gi|123201444|gb|ABM73052.1| FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
[Prochlorococcus marinus str. MIT 9515]
Length = 473
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 69/438 (15%), Positives = 163/438 (37%), Gaps = 15/438 (3%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KS 61
V + L++ IPSN +E I I A I GFR GK+P + G
Sbjct: 8 VKTTALPQSRIALELEIPSNTCKSFVSETINSISRSAKIPGFRLGKIPKQVLIQRIGINQ 67
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + +++II + E + P + + LK+ L D+
Sbjct: 68 LYASALEKIIDKSWKEAIEMESIEPLSEPELVD---GFESLLKNFNPEKTLKINLQTDVA 124
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG---DKVTVDYT 178
P +++ L V + D K ID + + V+
Sbjct: 125 PTLKLKKSKGLSVEIIKRKFDPKSIDEALEKSRNQLANIIPVINRPARLGDIAVVSFKGI 184
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++ S ++ + + E +VG+K D K + FP+D+S ++ GK
Sbjct: 185 YKDSKKAIDGGSSDSMDLELEKNKMIPGFVEGIVGMKIDDNKTLNLKFPDDYSHEESRGK 244
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE-SAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ S+K++ +N+D A + G + ++ +++K++ + + +
Sbjct: 245 EAIFEVSLKDLKEKELPELNDDFAKQSGNKDSLKELKKDIEKQLKENFDNTQKNIKIEAL 304
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLAK 355
+D +S + ++P+++++ E +++ + ++ + + + + A+
Sbjct: 305 MDALSKELDAEIPKAMIDIEVRNNIEQTAQRFAQQGMDIKSTFTPELVKTLAESTRPQAE 364
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ V + L + E NI V ++E+ + + E +
Sbjct: 365 KNVQRNLALKALSESENITVEDKEINQKMKE-----YDDEISKSQKQIDIQKLKEVVLND 419
Query: 416 IFEDKVIDHILKSVQIVD 433
+ ++K+I + ++ + +
Sbjct: 420 LLKEKLITWLEENSTVKE 437
>gi|78780132|ref|YP_398244.1| trigger factor [Prochlorococcus marinus str. MIT 9312]
gi|119370918|sp|Q317Y7|TIG_PROM9 RecName: Full=Trigger factor; Short=TF
gi|78713631|gb|ABB50808.1| trigger factor [Prochlorococcus marinus str. MIT 9312]
Length = 481
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 74/442 (16%), Positives = 169/442 (38%), Gaps = 15/442 (3%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KS 61
V + ++ IPS NE I I A I GFR GK+P + G
Sbjct: 8 VKTTPLPQSRISFELEIPSETCKTCVNETISTISRSAKIPGFRLGKIPKQVLIQRIGITQ 67
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + +++II + E L + P + + LK L D+
Sbjct: 68 LHASALEKIIDKSWQEALKIKSIEPLSEPELVD---GFESLLAKFSPEKSLKFTLQTDVA 124
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET---ESEIGDKVTVDYT 178
P++++ L V + D K +D + + + V+
Sbjct: 125 PELKLKKSKGLSVEISKTKFDPKSVDEALEKSRSQFANIIPVTNRAAKLGDIAVVSFKGK 184
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++ + +++ + + E +V +K GD K + FPED+S +D GK
Sbjct: 185 YKDSGKEIDGGTSESMDLELEKNKMIPGFVEGIVKMKIGDTKTLNLKFPEDYSHEDSRGK 244
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ S+K++ +N+D A + ES ++ +++K++ E + +
Sbjct: 245 EAIFEVSLKDLKEKELPELNDDFAKQSGNKESLKELKKDIEKQLKENFEKTQKDIKIEAL 304
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLAK 355
LD ++N+ ++P+S+++ E +++ + ++ + + + + A+
Sbjct: 305 LDALTNELVAEIPKSMIDIEVRNNIEQTAQRFAQQGLDVKSTFTPELVKSLSESTRPQAE 364
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ V + L + EK NI V ++E+ + K++ +
Sbjct: 365 KNVQRNLALKALAEKENITVEKDEIDLKMKDYEDAISQSSKQI-----DIKKLTEVISKD 419
Query: 416 IFEDKVIDHILKSVQIVDRKVT 437
+ ++K+I + ++ ++ ++
Sbjct: 420 LLKEKLIIWLEENSEVKEKTTK 441
>gi|325855151|ref|ZP_08171774.1| trigger factor [Prevotella denticola CRIS 18C-A]
gi|325483888|gb|EGC86832.1| trigger factor [Prevotella denticola CRIS 18C-A]
Length = 455
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 52/455 (11%), Positives = 154/455 (33%), Gaps = 17/455 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + + + + D + ++D R +AN+ GFRPG+VP+ +K YG
Sbjct: 1 MKISFENPDKVNGLMTITVEEADYKDEVEKTLKDYRKRANVPGFRPGQVPMGLVKRQYGM 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + I+ I+ E + + ++ + +P ++ D +E + + +
Sbjct: 61 QVKVDVINRILGENLQKYITDNKIQMLGQPMAPESQESVD-----LEKEAPYEFKFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD--YT 178
P+ +I ++ VD+K ID+Q+ ++ +T +
Sbjct: 116 APEFKIELNGKNKIDYYEIAVDDKLIDQQVEMFQSRAGHYDKVDTFDPEQRDMLKGDLRE 175
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + LE ++ + ++ G K GD + +++
Sbjct: 176 LDENGNTLEGGITVEGASLMPQYIKVEDQKKLFDGAKLGDIITFNPTAAYPDNDIEVSSL 235
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + +G+ ++ E R+ + +
Sbjct: 236 LKIKKDEVAGHKGNFSYQITEISRFVKAENNAELWKGVYGEQAGIKDEAGFRKAIADGLK 295
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + + L + + + N EE ++ + + + +
Sbjct: 296 EQLKGDSDYRFIQDLRAYCEKKVGKLTFPDTILKRIMLANNKDKGEEFVEKNYEQSIKEL 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF----QKYPNA 408
++ + + I+V + +++ + Q ++ L+ + K
Sbjct: 356 TWHLIKQQLAAAHGIKVEDNDVRESARQMARAQFAQYGMTNVPDDYLNGYADEMLKKREN 415
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ + K+ + + V++ + V+ ++
Sbjct: 416 IDSFVEAALDRKLAAAVKEIVKLNVKSVSLEEFNK 450
>gi|149275733|ref|ZP_01881878.1| FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor)
[Pedobacter sp. BAL39]
gi|149233161|gb|EDM38535.1| FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor)
[Pedobacter sp. BAL39]
Length = 448
Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats.
Identities = 74/468 (15%), Positives = 173/468 (36%), Gaps = 47/468 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ L + + I T+ ++ I++ KAN+ GFR G VP +HIK +YG+
Sbjct: 1 MNITQEKINDLNAVVKIKISPEDYTEKVDKSIKEQAKKANLPGFRKGMVPAAHIKKMYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SIL E I+ ++ E + + L+ +P ++ D +GT + +
Sbjct: 61 SILVEEINNLLSETLNKHLTDNKVEILGQPLPVMD----DTKEFKWDGTDEFDFDYELGL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P + + + T+ + DE+ + ++ I ++ E +E +S
Sbjct: 117 APAVGLEVTSKDKFTEYKVKADEETLASRIKNIRRSYGKMTNPEVSAEDDVLYAELTQLS 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS--------- 231
D + E + + + LVGLK D E++ D +
Sbjct: 177 ADGSVFEGGISATGSIRLDQVTD-KKILKSLVGLKKDDVVELDVPKAFDKNEVIIAKLLN 235
Query: 232 --IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE----SESAMRGLCSQKIKQHS 285
+D + + S+K V +N + ++ E E+ +++++
Sbjct: 236 ISEEDAKDLQSKFTVSVKNVNRLEEADLNQEFFDKIFGEGVVTDEAGFTAKITEEVEGMF 295
Query: 286 EFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEE 345
+ +K++ + + ++P++ + +K+ E
Sbjct: 296 QQDADRKLQNDMYTQLIEGVNIELPDAFLRKWLKATNEKLTDEELEQGYDDFA------- 348
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRF---PGHEKKM 398
+ + ++ + + NNIE+ E++ + L Q + P E ++
Sbjct: 349 ----------KNLKWTLIENKLIKDNNIEIKYEDVFETAKQRLDAQFRMYSPAPMPEDQL 398
Query: 399 LDH---FQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ F K + + + KV D+I + +++ +++ +
Sbjct: 399 AQYTATFLKEKDNANRIFDEVKAIKVFDYIKSVATLDQKEIAYNKFIE 446
>gi|254495061|ref|ZP_05107985.1| FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor)
[Polaribacter sp. MED152]
gi|85819411|gb|EAQ40568.1| FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor)
[Polaribacter sp. MED152]
Length = 440
Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats.
Identities = 67/464 (14%), Positives = 169/464 (36%), Gaps = 47/464 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + L + V I ++ E + D R KA+I GFR G VP+ IK YGK
Sbjct: 1 MNITKENVDALNAVVKVDIVADDYQAKVTEVLTDYRKKADIPGFRKGHVPMGMIKKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ + ++++I++ + + L++ P + +
Sbjct: 61 SVMIDEVNKLIQDSLNKFLTEEKLDILGNP-------LPRVNEDFNWDADTFTFEFELGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ +V Q E+ ID ++ I E +E + T +
Sbjct: 114 APEFDVDLSAKNKVKQYNIVATEELIDEEVKNIQTRYGKMSAIEEATE-----HSNVTGT 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD----------QKEIERFFPEDH 230
N K + + ++G K GD + + +
Sbjct: 169 FVNEEAGINKKSTFLVNDLKG---KKNEKKVIGAKVGDVIELGTKKLFEDDHKLQHILGV 225
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
+ V + +++++ P ++ +L +L + + +KIK+ +E
Sbjct: 226 EHDVIHDLDVTVTLTVEDITKTEPADLDKELFDKLFVDGSVSTVTELREKIKEDAEKQFA 285
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
Q+ +Q+L+ + + L E + + E+
Sbjct: 286 QQGDQQLLNAVQEYLIENTKFDL------------PAEFLKKWLATAGEKELTAEEAAAE 333
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGHEKKMLD------ 400
+ +++ + ++ G I + N+I++ +E+ + + QQ+ +F + +
Sbjct: 334 YEKSEKGLRYQLIEGKIMKDNDIKLDYKELVDYAKGFIRQQMAQFGNMNPEEKELDDIAG 393
Query: 401 HFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ + +L+ + K++ + +++ ++VT+++
Sbjct: 394 RILQNQDEAQKLQGQLISQKLLAFLKENMNFKTKEVTYEEFIKE 437
>gi|327312569|ref|YP_004328006.1| trigger factor [Prevotella denticola F0289]
gi|326944134|gb|AEA20019.1| trigger factor [Prevotella denticola F0289]
Length = 455
Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats.
Identities = 52/455 (11%), Positives = 154/455 (33%), Gaps = 17/455 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + + + + D + ++D R +AN+ GFRPG+VP+ +K YG
Sbjct: 1 MKISFENPDKVNGLMTITVEEADYKDEVEKTLKDYRKRANVPGFRPGQVPMGLVKRQYGM 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + I+ I+ E + + ++ + +P ++ D +E + + +
Sbjct: 61 QVKVDVINRILGENLQKYITDNKIQMLGQPMAPESQESVD-----LEKEAPYEFKFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD--YT 178
P+ +I ++ VD+K ID+Q+ ++ +T +
Sbjct: 116 APEFKIELNGKNKIDYYEIAVDDKLIDQQVEMFQSRAGHYDKVDTFDPEQRDMLKGDLRE 175
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + LE ++ + ++ G K GD + +++
Sbjct: 176 LDENGNTLEGGITVEGASLMPQYIKVEDQKKLFDGAKLGDIITFNPTAAYPDNDIEVSSL 235
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + + +G+ ++ E R+ + +
Sbjct: 236 LKIKKDEVAGHKGNFSYQITEISRFVKAENNAELWKGVYGEQAGIKDEAGFRKAIADGLK 295
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + + L + + + N EE ++ + + + +
Sbjct: 296 EQLKGDSDYRFIQDLRVYCEKKVGKLTFPDTILKRIMLANNKDKGEEFVEKNYEQSIKEL 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF----QKYPNA 408
++ + + I+V + +++ + Q ++ L+ + K
Sbjct: 356 TWHLIKQQLATAHGIKVEDNDVRESARQMARAQFAQYGMTNVPDDYLNGYADEMLKKREN 415
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ + K+ + + V++ + V+ ++
Sbjct: 416 IDSFVEAALDRKLAAAVKEIVKLNVKSVSLEEFNK 450
>gi|291295953|ref|YP_003507351.1| trigger factor [Meiothermus ruber DSM 1279]
gi|290470912|gb|ADD28331.1| trigger factor [Meiothermus ruber DSM 1279]
Length = 407
Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats.
Identities = 68/432 (15%), Positives = 166/432 (38%), Gaps = 43/432 (9%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETID 68
+G K ++ V +P++++ ++ + D S+ + GFRPGK P I++ GK +L + +
Sbjct: 8 DGYKVKIKVEVPASQVEQAYRSVLNDYASRVRVPGFRPGKAPAKVIEAKIGKELLLDEVK 67
Query: 69 EIIK-EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
E ++ E P+ + + + + + + P++++
Sbjct: 68 EALRDETFPKAARELSLLPVG----------ARVLEEHLTFGEPFVYTVEVENYPEVKLP 117
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ ++ + E+ ++ ++R + ++ + E + N +
Sbjct: 118 DWRSFKLEVETPELTDEVVNRALEDLRSRYGEMVAVDREVQ-------------ANDHVF 164
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+++ +F V + E L+G K GD+ + E + +
Sbjct: 165 IETEDGGRFPVVMENAQPHVREALLGKKAGDEVLVPVKDGE--------TVVREVKTKVL 216
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
EV + ++++ A +G ++ A+ + +K E R Q+L+ ++
Sbjct: 217 EVKALQLPELDDEFAKTVGEDNLEALTAKVRESLKAQFERETRNAKASQLLEKLAEALEV 276
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEE------DLQYYHMLAKRRVLTG 361
++P S+ + E +LQ + ++ E Q A +R+
Sbjct: 277 EIPPSMQQREERSLLQSLAEDLQQQRLDINEYLQQLERDGKLEEFKQNLSQNATKRLRRS 336
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ + + E+ +++EE L + + ++ + ALA LR DK
Sbjct: 337 LAVEALAEELKTALSQEEFDEFLAELARSYRTTPARLQNEL--DQEALARLRIQRLHDKA 394
Query: 422 IDHILKSVQIVD 433
+L++VQI++
Sbjct: 395 ---LLEAVQILE 403
>gi|298252715|ref|ZP_06976509.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Gardnerella vaginalis 5-1]
gi|297533079|gb|EFH71963.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Gardnerella vaginalis 5-1]
Length = 422
Score = 147 bits (369), Expect = 5e-33, Method: Composition-based stats.
Identities = 57/441 (12%), Positives = 165/441 (37%), Gaps = 26/441 (5%)
Query: 28 FNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KSILSETIDEIIKEIVPEILSKRDERA 86
E ++I + N+ GFR G VP + G ++ E ++ + E+ + L ++ R
Sbjct: 1 MEEARKEIAKQINVPGFRKGHVPGKIVDQRVGFAAVAGEAVNSAVPELYSKALEEKKIRP 60
Query: 87 AMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEI 146
+P + E + LK + + P +++ F +++ + +V +K++
Sbjct: 61 MDQPEFDVQE-----VPTSTDADASLKFVATVERRPDFKLNKFKGVEIEVEKPKVSDKDV 115
Query: 147 DRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSE 206
++ + + + + GD +D +D+ +++ +++ V + +GS L
Sbjct: 116 KERLESLRQRFATLVGVDRPAAKGDYTNIDLEARIDDEVVD--AQEGVSYEIGSGVLLDG 173
Query: 207 TTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-L 265
E L L G++ E G+K ++ + V + +++D A
Sbjct: 174 LDEALDSLSAGEETTFEGTLESG----KHKGEKAQIKVKVNSVKTQELPELDDDFAQEAS 229
Query: 266 GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKV 325
F++ ++ + +Q +E + L + + VP+ +++ + L+ +
Sbjct: 230 EFDTLKDLKADIRKACEQAAEGRQATNARDAFLVKLQEEVEIPVPKGVLDKAVSEHLKGM 289
Query: 326 RFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALY 385
+ + + ++ A++ + +VL + E+ ++ V++ ++ + L
Sbjct: 290 ----------TPDPEKATKKQKDEAQQAAEKELRDQMVLDALAEQMDVTVSQADVTNFLV 339
Query: 386 QQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVD--RKVTFDQLFD 443
++ + ++ L + K + +++V+ V +
Sbjct: 340 SVAQQYGMDPNQFINAIVNN-GQLGSAVQEVARSKGLLAGMRAVKFVSGGEALDLSAFLS 398
Query: 444 NSSESSPEKLLDKSSKVETFQ 464
+ ++ +
Sbjct: 399 EDDDEDESVKAASAAAEVADE 419
>gi|283955377|ref|ZP_06372876.1| trigger factor (peptidyl-prolyl cis /trans isomerase, chaperone)
[Campylobacter jejuni subsp. jejuni 414]
gi|283793137|gb|EFC31907.1| trigger factor (peptidyl-prolyl cis /trans isomerase, chaperone)
[Campylobacter jejuni subsp. jejuni 414]
Length = 444
Score = 147 bits (369), Expect = 5e-33, Method: Composition-based stats.
Identities = 88/433 (20%), Positives = 182/433 (42%), Gaps = 16/433 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP+S + Y +
Sbjct: 1 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYER 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + K V L + + ++ L
Sbjct: 61 ELTQDAEQNLFKSAVNSALKELK-------KESKELVGEPYFEKFDRKDGEIIAELILSF 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
P+I++ ++ L +V +KEID + E+ K E +T+ + GD D+
Sbjct: 114 KPEIKLDDYEKLIPEYQTPKVSKKEIDEKKEELLKRFATPEAIKTKRALQEGDFAKFDFE 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D+ E +N +GS E +VG+K G++K+I+ FP+++S+ LA K
Sbjct: 174 GFLDDKAFEGGKAENYVLEIGSKQFIPGFEEGMVGMKIGEEKDIKVTFPKEYSVAHLANK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----RQKV 293
+ E+ +++++ +L E A + +K+K+ + ++
Sbjct: 234 DATFKVKLHEIQELKIPELDDEMLKKLLPGEEKASIEVLDEKLKEQIKNEKLFKLVNDEL 293
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQYYHM 352
K + D + KY F +P+ +VE E + ++ S + + +E +
Sbjct: 294 KGKFADALIEKYNFYLPKGIVEQETDMQMRAAFNTFSEKEIEELKANKEKYQEKRDSFKE 353
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V ++ + + IEV ++E+ A+Y + R+ + K+ L++++K AL +
Sbjct: 354 EAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKK-QGALPAV 412
Query: 413 RAPIFEDKVIDHI 425
+ + E+K+ + I
Sbjct: 413 KMALIEEKLFNDI 425
>gi|332673402|gb|AEE70219.1| trigger factor [Helicobacter pylori 83]
Length = 451
Score = 147 bits (369), Expect = 5e-33, Method: Composition-based stats.
Identities = 87/462 (18%), Positives = 209/462 (45%), Gaps = 22/462 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSIENLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKIRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+I+E++ + P++T E + ++
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIENKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTV 175
+ P I + + + + +E++ID ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVGVEIPNEEKIDERLKQLAKDYAKFVDADAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DN E +N I+GS + + + L+G++ ++KE FP + + L
Sbjct: 171 DFEGFIDNAPFEGGKAENFNLILGSKQMLEDFEKALLGMQASEEKEFPLTFPSKYHAEHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L ++++ L
Sbjct: 231 AGKEALFKVKLHQIQAREALEINDELAKIVLANEENATLKLLKERVEGQLFLENKARLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQESQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ ++K N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQNPESLIEQYRKN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
A ++ + ED+V+ ++L +++ +++ N+ ++ +
Sbjct: 410 AAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKTQAD 451
>gi|15606542|ref|NP_213922.1| trigger factor [Aquifex aeolicus VF5]
gi|12230721|sp|O67358|TIG_AQUAE RecName: Full=Trigger factor; Short=TF
gi|2983751|gb|AAC07311.1| trigger factor [Aquifex aeolicus VF5]
Length = 478
Score = 147 bits (369), Expect = 5e-33, Method: Composition-based stats.
Identities = 80/422 (18%), Positives = 182/422 (43%), Gaps = 14/422 (3%)
Query: 11 LKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEI 70
L + L V I + + + +E + ++ I+GFR GK PL +++ Y + E +I
Sbjct: 44 LFKALTVEIQGDSVKEKIDEMYKQLQKTVQIQGFRKGKAPLWIVRAKYKDYVEEEVGKKI 103
Query: 71 IKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFD 130
E + + L + + + + E + E +K +S+++ P+ E+ +
Sbjct: 104 ADETLQKALEEANLKPVADVFLEKVE--------VDEKEGKVKYVVSFEVAPEFELKDVE 155
Query: 131 DLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQS 190
+L+V E E + ++ + + N +E K+ + + V+ + E +
Sbjct: 156 NLEVEVPKIEFKEDYVKEELERLREANAVWEPKDENEPAQEGDMLVVEYEVEEIGGEGEK 215
Query: 191 KKNVQ-FIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEV 249
K I+G L E E L G K G++ E++ D K++ + IKE+
Sbjct: 216 VKQETSVILGQGMLRPEVEEALKGKKVGEEVELKELPLYDQEGKEVGKVNI--KIKIKEI 273
Query: 250 FSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDV 309
+ +N++ A LG+ S + + IKQ E L Q ++ ++ D + + V
Sbjct: 274 KKKVLPELNDEFAKELGYASLKDLEEKIREDIKQKLEKLKEQVIEERVADKLVEIHDIPV 333
Query: 310 PESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGE 369
P++L+ E + ++ + E+ + ++ VD ++ ++ +A+ + +L +
Sbjct: 334 PQTLLRRELSFLVDRRLRELQALGIDTRYVDI--KKIVEEVQPIAEANIKLRFILDKYAQ 391
Query: 370 KNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSV 429
+ IE T E++++ + ++ ++ +F++ N + K + I+ V
Sbjct: 392 EKGIEPTGEDIEAQYKELAEQYGTTVDEIKKYFKEN-NLEQVVYEDARRKKALKEIISKV 450
Query: 430 QI 431
+I
Sbjct: 451 KI 452
>gi|218295538|ref|ZP_03496351.1| trigger factor [Thermus aquaticus Y51MC23]
gi|218244170|gb|EED10696.1| trigger factor [Thermus aquaticus Y51MC23]
Length = 403
Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats.
Identities = 72/423 (17%), Positives = 164/423 (38%), Gaps = 39/423 (9%)
Query: 13 RELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SILSETIDEII 71
++ V +P+ ++ S+ ++D+ + I GFRPGK PL +++ G+ +L + + ++
Sbjct: 12 VKVRVEVPAEKVEASYQAMLKDLAKRVRIPGFRPGKAPLKVVEARLGREELLKDLKERLV 71
Query: 72 KEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDD 131
+E PE + + + + ++ + + P++ + +
Sbjct: 72 EETYPEAVRELGLLPVA----------ARVVEEELKEGEGFRYVAEVENYPEVRLPDWRS 121
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ EV E+ +D+ + E+ + E+ + + +++
Sbjct: 122 FSLEVSPPEVTEEMVDKALEELRHRYAELVPVDREAR-------------EGDHVFVRTE 168
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ V+F + + E L+G + G+ + E K I EV +
Sbjct: 169 EGVEFPIDLSKALPHVREALLGKRAGEVVMVPVLNKEG-------EKVREARTEILEVKT 221
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPE 311
++ + A L ES +R Q+++ ++ ++ +R L+ ++ ++P
Sbjct: 222 LELPELDEEFAKTLEAESLEDLRTKVRQRLEAQAQRAYQEARERAFLEKLAEGLEAEIPP 281
Query: 312 SLVENEYNGILQKVRFEMSSANQKSQNVDSIDE------EDLQYYHMLAKRRVLTGIVLG 365
S+VE E +L+ + ++ + E + + A +RV +
Sbjct: 282 SMVEAEERHLLEHLAEDLYRQGVTLEAYLKALEEKGELPKFKEELRQEALKRVRRSLAKE 341
Query: 366 TIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHI 425
+ E+ EVTEEE Q+ L + ++ F + LA LRA +DK +
Sbjct: 342 KLAEELKPEVTEEEWQAYLQAVARSYGMSLAELKREFGERG--LARLRAAYVQDKALRQA 399
Query: 426 LKS 428
L
Sbjct: 400 LAQ 402
>gi|109947465|ref|YP_664693.1| trigger factor [Helicobacter acinonychis str. Sheeba]
gi|123066219|sp|Q17XD2|TIG_HELAH RecName: Full=Trigger factor; Short=TF
gi|109714686|emb|CAJ99694.1| trigger factor [Helicobacter acinonychis str. Sheeba]
Length = 451
Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats.
Identities = 92/460 (20%), Positives = 213/460 (46%), Gaps = 22/460 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANSHLSAKPSIEDLKKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +E+ +EI+ L + P++T E + ++
Sbjct: 61 QIEQDAQEEMFQEILKNALKELGIESKDLIGSPNLTKFE----------KKDTHFEIEAD 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF--EVKETESEIGDKVTV 175
+ P I + + + ++ VDE++++ ++ ++AK+ F + +++ DK+T+
Sbjct: 111 IGLKPTIVLDKIKECVPSVEVEAVDEEKVNERLKQLAKDYAKFIDTDAQRKAQNDDKLTI 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +DNV E +N I+GS + + + L+G++ G++KE FP D+ K L
Sbjct: 171 DFEGFIDNVPFEGGKTQNFSLILGSKQMLEDFEKALLGMQAGEEKEFSLTFPSDYHAKHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
AGK+ + ++ + + +N++LA + E+A L +++K L
Sbjct: 231 AGKEALFKVKLHQIQAREVLEINDELAKIVLANEENAALELLKERVKGQLFLENKVRLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQY 349
+++K ++++ + K FD+P++++E E + + + + M + + Q +E +
Sbjct: 291 EELKEKLIENLDEKILFDLPKTIIEQEMDLLFRNALYSMQAEEVKSLQENQEKAKEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A + V ++ + ++ I V + E+ LY + + + +++ +++ N L
Sbjct: 351 FRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEALMTGQNPENLIEQYRRN-NML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
A ++ + ED+V+ + L +++ +++ N+ ++
Sbjct: 410 AAVKMAMIEDRVLTYFLDKNLSKEQQEILEKMRPNAQKTQ 449
>gi|39938935|ref|NP_950701.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Onion yellows
phytoplasma OY-M]
gi|67461789|sp|Q6YQC6|TIG_ONYPE RecName: Full=Trigger factor; Short=TF
gi|39722044|dbj|BAD04534.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Onion yellows
phytoplasma OY-M]
Length = 430
Score = 146 bits (367), Expect = 7e-33, Method: Composition-based stats.
Identities = 70/437 (16%), Positives = 181/437 (41%), Gaps = 21/437 (4%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-IL 63
K K + + S L E I+ K IKGFR G VP ++ +GK +
Sbjct: 3 IKKINDQKVQYFFEVSSKELETQLASAYEKIKPKVEIKGFRKGHVPRKIFENRFGKDNLY 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
S+ ++ I++ E+L K+D + P + D+ ++ + L + + P+
Sbjct: 63 SDALENIVQTKYQEVLQKKDFESMGMPQV------IDLDEKKLKDNQNFTFGLEFIVKPK 116
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYTVSV 181
+ + + L++T+D EV + E++ ++ + + E K E+ D D+ V
Sbjct: 117 VTLKKYLGLEITKDDLEVTDYEVEEKINSLLEKQTTLESKTQNDFLELTDIAIFDFEGFV 176
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D+ E + K+ +GS + ++G+K G K+I FP D+ K LA +K
Sbjct: 177 DDKPFEGGTAKDFSLEIGSGQFVPGFEDQMLGMKQGQTKDINITFPSDYHQKSLANQKAV 236
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ ++ + + ++L L + ++ Q + + ++ V++Q++
Sbjct: 237 FKVTLHQIKTKKIPQLTDNLVKSLKLVNASTVEELKNNTKQTLLAQKKHKEKENVEKQVI 296
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLA 354
+ + ++P+ +V E + ++ ++ N + DE+ + + A
Sbjct: 297 EQLVKNSELEIPQEIVSQEQIRLQKEFEAQLKQQNLTLEQYKQYLGIDDEKMEKEFSQQA 356
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ + +++ + + + +++E+++ + ++ + + L+
Sbjct: 357 QKNIEYQLIMEQVAAQEKLTISQEKIEQKYQNLSNHYKVPVNQIKQNLPE-----KNLKH 411
Query: 415 PIFEDKVIDHILKSVQI 431
+ + ++ ++ +
Sbjct: 412 SLLMGEALELVINKAVV 428
>gi|288574918|ref|ZP_06393275.1| trigger factor [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570659|gb|EFC92216.1| trigger factor [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 424
Score = 146 bits (367), Expect = 8e-33, Method: Composition-based stats.
Identities = 86/439 (19%), Positives = 188/439 (42%), Gaps = 30/439 (6%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSE 65
E + ++ ++ + + A I GFR GK P + +GK IL+E
Sbjct: 3 SQEKNVVTIKAVVEKEDFKKEVSKMYDKLAKNAAIPGFRRGKAPRKVLDLRFGKEAILAE 62
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
++E+I ++ EI + D P + I+ +IE D++L L +++ P++
Sbjct: 63 ALEEMIPSLLGEITTDYDLNLIEDPDVKID---------VIEEGKDVELTLVFEVEPEVS 113
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT---VSVD 182
++ ++ V + V + + + ++ K + + E + S GD V DY+ V D
Sbjct: 114 LADLSEILVVKPKINVTDDHVAEAIEDLRKRHASLETVDRPSASGDVVVADYSTVVVDDD 173
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ + F + L E + LVG+ D++E + ED+ + LAGK +
Sbjct: 174 GEEIVSHPAETHSFDLVEETLRPEIYQTLVGVSPEDERESQVVIDEDYKDEKLAGKTAKY 233
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLGFE-----SESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
F++KEV + +++ V++ E E R SQ++ +H E +Q + +
Sbjct: 234 KFTVKEVKERVLPDLDSSFFVQVFGEEGEAMDEETFRESISQRLGEHMEGEAQQAAEGDM 293
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + +VP S+V + + +++ + ++ D A+R
Sbjct: 294 VRKSVDASEVEVPVSMVNRQVENLKKRMEEQGAAG------------VDDSQLTSQAERD 341
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
V +VL G+ +E+T+E++ + + + + + F K + + E+ +
Sbjct: 342 VKEFLVLEAYGKDLAVELTKEDLDEEFQRVADGYGIGVEAVKEAFLKNKDKINEIAHSLK 401
Query: 418 EDKVIDHILKSVQIVDRKV 436
K I +++ V + ++++
Sbjct: 402 VKKTISAMMEKVTVEEKEL 420
>gi|296110627|ref|YP_003621008.1| trigger factor [Leuconostoc kimchii IMSNU 11154]
gi|295832158|gb|ADG40039.1| trigger factor [Leuconostoc kimchii IMSNU 11154]
Length = 431
Score = 146 bits (367), Expect = 8e-33, Method: Composition-based stats.
Identities = 72/441 (16%), Positives = 174/441 (39%), Gaps = 26/441 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-I 62
+ + L+ I ++ + + + +++ +I GFR GKV + S +G+ +
Sbjct: 5 TVAADQKNQGTLEFEISRAQVEEGLEKAFQRNKNEVSIPGFRKGKVTKALFFSKFGEEAL 64
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
ET+D ++ + + RP+I ++ P
Sbjct: 65 YQETMDIVLPAAYEAAVEEAGITPVGRPNIEPVSM---------NKGEAWTMKAEIATAP 115
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYTVS 180
++++ + +L+V EV + ++D ++ + ++E ++E GD V +D+ S
Sbjct: 116 EVKLGEYLNLEVEAADTEVTDADVDAEIKRLQDGQAELVLQEEAVKAENGDTVVIDFDGS 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD + + +GS E LVG +G+ + FPED+ DLAGK+
Sbjct: 176 VDGEHFDGGQSNDFSLELGSGQFIPGFEEQLVGHTSGEDVNVTVTFPEDYQAADLAGKEA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
I E+ ++++ A E+ + ++ ++K+ + + + ++
Sbjct: 236 LFEVKIHELKRKELPELDDEFAKDVDEEVETLAELKEKTTKKLSEEKAESAQAAFEDAVI 295
Query: 299 DYISNKYT---FDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYH 351
+ + +P+++++ + + + + ++ Q +++ + +
Sbjct: 296 TKAVDNASIDGDKIPDAMIDEDVHRQIDQYLAQLQQQGISREMFFQISGQTEDDLHKQFE 355
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A RV T +VL I + IE TE+++ + + ++ ++ +
Sbjct: 356 EGAATRVKTNLVLEAIVKAEAIEPTEDQINAEVESLATQYKMEAAQVRANLSDS-----L 410
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
L+ I +VI I S +
Sbjct: 411 LKHDISMREVIKKITDSAKTK 431
>gi|126697183|ref|YP_001092069.1| trigger factor [Prochlorococcus marinus str. MIT 9301]
gi|166229914|sp|A3PFE3|TIG_PROM0 RecName: Full=Trigger factor; Short=TF
gi|126544226|gb|ABO18468.1| FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase)
[Prochlorococcus marinus str. MIT 9301]
Length = 477
Score = 146 bits (367), Expect = 9e-33, Method: Composition-based stats.
Identities = 73/438 (16%), Positives = 168/438 (38%), Gaps = 15/438 (3%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KS 61
V + ++ IPS NE I I A I GFR GK+P + G
Sbjct: 8 VKTTPLPQSRISFELEIPSETCKTCVNETISTISRSAKIPGFRLGKIPKQVLIQRIGITQ 67
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + +++II + E L + P + + LK+ L D+
Sbjct: 68 LHASALEKIIDKSWQEALKIKSIEPLSEPELVD---GFESLLAKFSPEKSLKVTLQTDVA 124
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET---ESEIGDKVTVDYT 178
P++++ L V + D K ID + + + V+
Sbjct: 125 PELKLKKSKGLSVEISKTKFDPKSIDEALEKSRNQFANIIPVTNRAAKLGDIAVVSFKGK 184
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++ + +++ + + E +V +K GD K + FPED+S +D GK
Sbjct: 185 YKDSGKEIDGGTSESMDLELEKNKMIPGFVEGIVKMKIGDTKTLNLKFPEDYSHEDSRGK 244
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K++ +N+D A + ES ++ +++K + E + +
Sbjct: 245 EAIFEVNLKDLKEKELPELNDDFAKQSGNKESLKELKKDIEKQLKDNFEKTQKDIKIEAL 304
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLAK 355
LD ++N+ ++P+S+++ E +++ + ++ + + + + A+
Sbjct: 305 LDALTNELVTEIPKSMIDLEVRNNIEQTAQRFAQQGLDVKSTFTPELVKSLAESTRPQAE 364
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ V + L + EK NI + + E+ + + K++ +
Sbjct: 365 KNVQRNLALKALAEKENITIDKSEIDLKMKEYDDVISQSSKQI-----DIKKLTEVISND 419
Query: 416 IFEDKVIDHILKSVQIVD 433
+ ++K+I + ++ ++ +
Sbjct: 420 LLKEKLIIWLEENSEVNE 437
>gi|113474442|ref|YP_720503.1| trigger factor [Trichodesmium erythraeum IMS101]
gi|123352704|sp|Q118P4|TIG_TRIEI RecName: Full=Trigger factor; Short=TF
gi|110165490|gb|ABG50030.1| trigger factor [Trichodesmium erythraeum IMS101]
Length = 485
Score = 146 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 85/488 (17%), Positives = 195/488 (39%), Gaps = 25/488 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V ++ + L++ I +++ + I+ ANI GFR GKVP + + GK
Sbjct: 1 MKVTQEKLPASQISLEIEISPEMSKNAYEQIIKKYIRSANIPGFRKGKVPRNILIQRLGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ I + +D++I + + + +A + + + E + E ++ D
Sbjct: 61 NYIKAMALDDLINNCLEKAREQESIKAIGQFEL---KTEFEELVKDFEPGKEMAFSAKVD 117
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV---- 175
+ P+ ++ + V + + D +D + E E + V +
Sbjct: 118 VEPEAKVEDYKGFLVQAEEAKYDSALVDEFLEERRSRMGTLIPIEGRAAEMGDVAIVDFV 177
Query: 176 ----DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
T + + ++ Q + E +VG+K + KEI FP ++S
Sbjct: 178 GIIPSETEGEEAQEVPGGKAQDFQMDLKEGQFIPGFIEGIVGMKLQETKEISAQFPSEYS 237
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVR 290
+LAGK V ++KE+ +++DLA FE+ +R QK + E +
Sbjct: 238 EANLAGKPVVFTVTLKELKEKELPELDDDLAQEISEFETIDKLREFLEQKFTKEKEEKTK 297
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL--Q 348
Q ++ I+D + ++PE+L++NE +L + ++S + S ++ +
Sbjct: 298 QNKEKAIIDELVTHLEVEIPETLIKNEVQQMLAQSAMDLSQYGIDVKEFFSSEKLPEMQE 357
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
A R+ +V+ T+ ++ +I V EEE+++ + + K++ +
Sbjct: 358 RTRPEAIERLKRDLVIATVAKRESITVDEEEIKAESQKVV-------KQLKEKDFDSDRL 410
Query: 409 LAELRAPIFEDKVIDHILKSVQIV---DRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ + ++K I + + + + + + ++E ++ + +
Sbjct: 411 RQVVTQELLKEKTIKWLEANGTVELVPEGTLHTESQTPQTTEILETEVESEIPQASETIV 470
Query: 466 EEAPSEIS 473
E E++
Sbjct: 471 EVKAEEVA 478
>gi|170016864|ref|YP_001727783.1| trigger factor [Leuconostoc citreum KM20]
gi|238688951|sp|B1MXT7|TIG_LEUCK RecName: Full=Trigger factor; Short=TF
gi|169803721|gb|ACA82339.1| Trigger factor [Leuconostoc citreum KM20]
Length = 431
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 77/436 (17%), Positives = 173/436 (39%), Gaps = 26/436 (5%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSETI 67
+ + L+ I ++ + + + +++ +I GFR GKV + S +G+ + E +
Sbjct: 10 QKNQGTLEFEISRAQVEEGLEKAFQRNKNQVSIPGFRKGKVTKALFFSKFGEEALYQEAM 69
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
D ++ + + RP+I L+ P I++
Sbjct: 70 DIVLPAAYEAAVEEAGITPVGRPNIEPVSM---------NKGEAWTLKAEVTTAPAIKLG 120
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET--ESEIGDKVTVDYTVSVDNVI 185
+ +L+V + V + ++D ++ + ++E ++E GD V +D+ SVD
Sbjct: 121 EYLNLEVAAEDTAVSDADVDAEIKRLQDGQAELVLQEESVKAEDGDTVVIDFDGSVDGDH 180
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ + +GS E LVG G+ E++ FPED+ DLAGK+
Sbjct: 181 FDGGQANDFSLALGSGQFIPGFEEQLVGHTAGEDVEVKVTFPEDYQAADLAGKEALFEVK 240
Query: 246 IKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
I E+ ++++ A E+ + ++ ++K+ E + + ++ +
Sbjct: 241 IHELKRKELPELDDEFAKDVDEEVETLAELKEKTAKKLADDKEAAAKSAFEDAVITKAVD 300
Query: 304 KYTFD---VPESLVENEYNGILQKVRFEMS----SANQKSQNVDSIDEEDLQYYHMLAKR 356
+ D +P++++E + + + + ++ S Q +E+ + + A
Sbjct: 301 NASVDGDAIPDAMIEEDVHRQVDQYLGQLQQQGISREMFFQISGQTEEDLHKQFEEGAAT 360
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV T +VL I + IE + E++ + ++ +++ L+ I
Sbjct: 361 RVKTNLVLEAIVKAEGIEPSAEQVTEEINNLATQYNMDAEQVRSSLSDS-----LLKHDI 415
Query: 417 FEDKVIDHILKSVQIV 432
+VI I S +
Sbjct: 416 AMREVIKKITDSAKAK 431
>gi|225012268|ref|ZP_03702705.1| trigger factor domain protein [Flavobacteria bacterium MS024-2A]
gi|225003823|gb|EEG41796.1| trigger factor domain protein [Flavobacteria bacterium MS024-2A]
Length = 443
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 67/459 (14%), Positives = 164/459 (35%), Gaps = 34/459 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L +++ + + + + + R ANI GFR G VP+ IK YG+
Sbjct: 1 MNISRTDLDALNATINITLDRTDYQEKVDAVLINYRKTANIPGFRKGHVPMGMIKKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ ++ +++I++E + + + P E E D ++ + +
Sbjct: 61 AVTADEVNKILREQLDTFIKEEKLDLLGNPLPKAPEQELDWSADS------MNFEFELGL 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-----DKVTV 175
P+ E+ +V + E D K ++ QM + K ++ + +
Sbjct: 115 APKFEVKLDILKKVVRYEIEPDAKMLNEQMDYVRKQYGKIVSQKNPEKGYEITAQFRNEQ 174
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
+ ED K V + S + GL + D +D +K +
Sbjct: 175 IELEKMSTFTFEDIKSKKVIKELKEVTTGSVLMVLGKGLFSDDATAKRLLSLDDEQLKTI 234
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K L IKE+ +P +N +L +L KIK+ + + +
Sbjct: 235 --KTAELTVEIKEINERIPAELNQELFDKLYAPGTVTSEADLKTKIKEGLQKQFEPQADQ 292
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
++L+ ++ L + +Q E + + + ++
Sbjct: 293 KLLNDVTEYLVEKTKFKLPSDFLKRWMQTAGKEPLTPEAAVEEFEK------------SE 340
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPGHEKK-----MLDHFQKYP 406
+ + ++ G I +++ +++T +E++ + Q+ ++ ++ +
Sbjct: 341 KGIRYQLIEGKIIDEHKLDMTFDELKEFTATLVQNQMMQYGQQPDPTQIDGIVSNILSNQ 400
Query: 407 NALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
+ + +K++ ++ + +KV FD +
Sbjct: 401 EETRRISEQLMSNKMLTFFKENAPLKIKKVGFDAFIKEA 439
>gi|332519949|ref|ZP_08396413.1| trigger factor [Lacinutrix algicola 5H-3-7-4]
gi|332044508|gb|EGI80702.1| trigger factor [Lacinutrix algicola 5H-3-7-4]
Length = 442
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 67/456 (14%), Positives = 161/456 (35%), Gaps = 31/456 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + V I + + + D R ANI GFR G VP+ +K YGK
Sbjct: 1 MNITRENKDALNAVVTVAIEKDDYASKVEKILTDYRKTANIPGFRKGHVPMGMVKKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L + ++++I+E + + L++ +P + + +
Sbjct: 61 AVLIDEVNKLIQEGLNKYLTEEKLDVLGQPLPKP-------QDDINWDEDNFSFEFELGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ +TQ D+K ID Q+ I K ++ ++ +
Sbjct: 114 APEFDVELKAKKAITQYNIVADDKMIDDQVVNIQKQYGKLIAQDKVAKDSEITGTYTNEE 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG--DQKEIERFFPEDHSIKDLAGK 238
+ + ++ LKT + E G
Sbjct: 174 EGIENKVTLTLDKFKGKATEKQFIGAKVGDVITLKTKGLYSDDHELMHALKVEHDKAHGL 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +NF I E+ S ++ +L +L + +KIK+ +E Q+ +++L
Sbjct: 234 DIEVNFEISEINSRELAELDQELFDKLFGKDVVKSVTELKEKIKEDAEKQFVQQSDQKLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++ L E + ++ +DE + + +++ +
Sbjct: 294 NDVTEYLVDATKFDL------------PAEFLTKWMQASGEKPMDEATAKEEYEKSEKSL 341
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQS----ALYQQLGRFPG------HEKKMLDHFQKYPNA 408
++ I E N ++V E+++ + Q+ +F + + +
Sbjct: 342 RYQLIEAKIMEANELKVDFEDVKESAKNMIKVQMAQFGQMNPSDKELEDIAARVLSNQDE 401
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ L + K+++ + I +++T+++
Sbjct: 402 VRRLSEQVVSQKLLNLYKEKANIKTKELTYEKFVKE 437
>gi|189183700|ref|YP_001937485.1| trigger factor [Orientia tsutsugamushi str. Ikeda]
gi|189180471|dbj|BAG40251.1| trigger factor [Orientia tsutsugamushi str. Ikeda]
Length = 489
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 98/470 (20%), Positives = 208/470 (44%), Gaps = 21/470 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSH-------- 53
Q+IE SEGL++ + IP++ + D ++++ + ++AN+ GFR K
Sbjct: 3 QIIELQSEGLEKHFQISIPASVIKDKTDQKVISLTARANMPGFRKFKSGSHITSKAMQVK 62
Query: 54 ---IKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIE--- 107
++ Y SI ++ +++I V ++ + PSI IN+ S +
Sbjct: 63 QMQVRRQYEASIRNDVQNDVIVAAVESLIKSNNFSLIGDPSIKINDDSSIEVNSEQNANA 122
Query: 108 GTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES 167
D+ + + + + P+IEI F + + + + + E+ ++ + + ++ +
Sbjct: 123 EEKDITVDVKFTVYPEIEIPDFSQITLKKHVIQCTEESVNEFINGLRHEVYEYKDCSEQE 182
Query: 168 EIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLF-SETTEILVGLKTGDQKEIERFF 226
+ + +++ +ED +K++++FI+GS L + E G Q +I
Sbjct: 183 KAIKGSKLVIDIAITGDGIEDHNKEDIEFILGSGKLISKDIEERFTDSIVGSQLDISTTL 242
Query: 227 PEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSE 286
P+++ AGK L ++K++ P+ + + + S ++ + +
Sbjct: 243 PDNYPDSKAAGKLANLRVTVKKIQQPVL-ITEQQILDKYKVTSIDELKVKVKELQNKEFM 301
Query: 287 FLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKS---QNVDSID 343
L + ++ ++L+ + +D+P+ L+++EY + Q V + N S D
Sbjct: 302 GLSQILLRARLLNQLDKMLDYDLPKQLLKSEYAVVRQNVLAALKDNNNNGIKVALDKSSD 361
Query: 344 EEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ 403
+ QY +A RRV G+ + +K NI VT+EE L Q L + ++ +
Sbjct: 362 HDIEQYCQFVATRRVRIGLFVLHYADKKNITVTDEEKNMLLLQYLNKGKEEANAIVYAYN 421
Query: 404 KYPNAL-AELRAPIFEDKVIDHILKS-VQIVDRKVTFDQLFDNSSESSPE 451
L + E KVI+HIL++ VQI++ T D++ + E S +
Sbjct: 422 NNLRWLSNSIAMEAKEIKVINHILENEVQIIEEPCTSDEIEGFADEISKD 471
>gi|302345892|ref|YP_003814245.1| trigger factor [Prevotella melaninogenica ATCC 25845]
gi|302149389|gb|ADK95651.1| trigger factor [Prevotella melaninogenica ATCC 25845]
Length = 454
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 58/459 (12%), Positives = 160/459 (34%), Gaps = 17/459 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + + + + D + ++D R +AN+ GFR G+VP+ IK YG
Sbjct: 1 MKISFENPDKVNGLMTITVEEADYKDEVEKTLKDYRKRANVPGFRQGQVPVGLIKRQYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + I++I+ E + + ++ + +P + ++ D +E + + +
Sbjct: 61 QVKMDAINKILGESLQKYIADNKIQMLGQPMGSESQEAVD-----LEKPAPYEFKFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD--YT 178
P+ +I ++ VD+K ID+Q+ + +E ET +
Sbjct: 116 APEFKIELNGKNKIDYYEIAVDDKLIDQQVEMFQSRSGHYEQAETFDPEQRDLLKGDLRE 175
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + LE ++ + ++ G K GD + +++
Sbjct: 176 LDENGNTLEGGITVEGASLMPQYIKVEDQKKLFDGAKLGDIITFNPTAAYPDNDIEVSSL 235
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ E + + + + + E R+ + +
Sbjct: 236 LKIKKEEVAEHKGDFSYQITEISRFVKAENNAELWKSVYGEDADIKDEAAFRKAIADGLT 295
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + + L + + N EE ++ + + + +
Sbjct: 296 EQLKGDSNYKFIQDLRAYCEKKVGDLTYPDAILKRIMLANNQDKGEEFVEKNYAQSIKEL 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF----QKYPNA 408
++ + + +NI+V + +++ + Q ++ + L+ + K
Sbjct: 356 TWHLIKEQLAKDHNIKVDDNDVRESARQMARAQFAQYGMTNVPEDYLNGYADEMLKKREN 415
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ + K+ + I + V++ + V+ ++ SE
Sbjct: 416 VDSFVEAALDRKLAEAIKEVVKLNVKTVSLEEFNKLVSE 454
>gi|288803883|ref|ZP_06409308.1| trigger factor [Prevotella melaninogenica D18]
gi|288333648|gb|EFC72098.1| trigger factor [Prevotella melaninogenica D18]
Length = 454
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 57/459 (12%), Positives = 159/459 (34%), Gaps = 17/459 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + + + + D + ++D R +AN+ GFR G+VP+ IK YG
Sbjct: 1 MKISFENPDKVNGLMTITVEEADYKDEVEKTLKDYRKRANVPGFRQGQVPVGLIKRQYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + I++I+ E + + ++ + +P + ++ D +E + + +
Sbjct: 61 QVKMDAINKILGESLQKYIADNKIQMLGQPMGSESQEAVD-----LEKPAPYEFKFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD--YT 178
P+ +I ++ VD+K ID+Q+ + +E E +
Sbjct: 116 APEFKIELNGKNKIDYYEIAVDDKLIDQQVEMFQSRSGHYEQAEVFDPEQRDLLKGDLRE 175
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + LE ++ + ++ G K GD + +++
Sbjct: 176 LDENGNTLEGGITVEGASLMPQYIKVEDQKKLFDGAKLGDIITFNPTAAYPDNDIEVSSL 235
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ E + + + + + E R+ + +
Sbjct: 236 LKIKKEEVAEHKGNFSYQITEISRFVKAENNAELWKSVYGEDADIKDEAAFRKAIADGLT 295
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + + L + + N EE ++ + + + +
Sbjct: 296 EQLKGDSNYKFIQDLRTYCEKKVGDLTYPDAILKRIMLANNQDKGEEFVEKNYAQSIKEL 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF----QKYPNA 408
++ + + +NI+V + +++ + Q ++ + L+ + K
Sbjct: 356 TWHLIKEQLAKDHNIKVDDNDVRESARQMARAQFAQYGMTNVPEDYLNGYADEMLKKREN 415
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ + K+ + I + V++ + V+ ++ SE
Sbjct: 416 VDSFVEAALDRKLAEAIKEVVKLNVKTVSLEEFNKLVSE 454
>gi|28572437|ref|NP_789217.1| trigger factor [Tropheryma whipplei TW08/27]
gi|28410568|emb|CAD66955.1| trigger factor [Tropheryma whipplei TW08/27]
Length = 437
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 74/442 (16%), Positives = 166/442 (37%), Gaps = 45/442 (10%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ I + + +L V IPS L + ++ ++ GFR GKVP+ I GK
Sbjct: 6 KSIVQRVSETELKLQVTIPSESLKPHVDRAYREVAKTVSVPGFRRGKVPVRIIDQRIGKH 65
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L I++ I + + ++ P + I S E L++ +
Sbjct: 66 VVLDRAINDCIGDFFQSAVDEQGLTPVAAPK-------AHIASLPTEPDASLEVVFDVHV 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P ++ +F++ Q+ D +V + +D ++ I + F + + GD + +D +
Sbjct: 119 YPDVDFPAFENKQIEVDAIDVTDSMVDSEIVGIREKLATFTALDRPAIDGDFLILDLQIL 178
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL----- 235
+ +L + + V + +GS LF L + G I+ P + +
Sbjct: 179 DGDKVLSESNA--VPYELGSNTLFDGLDSALTSARAGYTTTIDLTPPVEDPAGENPQQDQ 236
Query: 236 ---AGKKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQ 291
+G R+ + V N++LA + GF + +R ++ I++ F
Sbjct: 237 FAKSGDTRRVKLKVSSVNKRDLPEENDELARLVGGFANLEELRKDSAKNIERSMLFQRSL 296
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+ + +L+ + ++ TF +P + + DE +
Sbjct: 297 QARDLLLEQLLSEITFPLPGPIADVL-------------------------DEIKDEEEK 331
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
++ I+L + + ++ + E+E++ L + ++ K
Sbjct: 332 QNRTKQARRDILLDLLAKTFSVTLKEDELERYLSSAAAQRKMSVATLVSVI-KSAGQDKY 390
Query: 412 LRAPIFEDKVIDHILKSVQIVD 433
+ + I +K + L V+++D
Sbjct: 391 VISDIVRNKALSIALSRVKVID 412
>gi|217967474|ref|YP_002352980.1| trigger factor [Dictyoglomus turgidum DSM 6724]
gi|217336573|gb|ACK42366.1| trigger factor [Dictyoglomus turgidum DSM 6724]
Length = 431
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 86/438 (19%), Positives = 179/438 (40%), Gaps = 20/438 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-K 60
+ + +G + +++V + + +S + + + + GFR G P ++ G +
Sbjct: 9 KYDIEKLQGSRIKVNVEVDAREREESLERAYKSLVKRYQVPGFRKGYTPRPVLERYLGIE 68
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E I + +E++ IL + P D+ + +LK ++
Sbjct: 69 AFEDEAIRIVAREVLNMILQNENFTPLQDPYF-------DLLPQEWKENENLKFSFVIEV 121
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++ + + ++ EV E+EI+R + +I E S V
Sbjct: 122 PPEFKLGDYKGFGLKKEKVEVSEEEINRVIEQIELQLSKLNTVEEGSIEKGDVVYLE--- 178
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
ED S+ + + + E E L+G+K G++K IE FPED K+LAG+ +
Sbjct: 179 ---REREDGSQLPPLWFTLNGQMLPELEEKLIGMKPGEEKVIEISFPEDFYEKELAGQSL 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
L + +K+++ ++ S R + IK+ E L K+ QILD
Sbjct: 236 PLKWKVKKIWRYEKP-DQEIFLQKVNASSIEEFREKVRESIKEEREKLEEDKLFSQILDK 294
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAKR 356
I D P S V IL++ E++ + ++ S +E + A++
Sbjct: 295 ILENTELDPPLSYVHYLAENILREFLTELNKKGVQLEDYLSQRGISKDEFVNNVIEDARK 354
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R+ ++L I E NI +++EE+ + + + K++ + + L+ +
Sbjct: 355 RIKIEMILDKIAEIENINISDEEINNVIKEIAENEGKEFKEIKREL-EREGTINTLKRNL 413
Query: 417 FEDKVIDHILKSVQIVDR 434
+KV + ++K + +
Sbjct: 414 LREKVREFLIKENVVEEE 431
>gi|260060591|ref|YP_003193671.1| trigger factor [Robiginitalea biformata HTCC2501]
gi|257796358|gb|EAR15890.2| trigger factor, putative [Robiginitalea biformata HTCC2501]
Length = 440
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 67/456 (14%), Positives = 166/456 (36%), Gaps = 31/456 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + L L V I D ++ ++D R ANI GFR G+VP+ IK YGK
Sbjct: 1 MNITKEQIDELNAVLKVAITKEDYQDKVDKILKDYRKNANIPGFRKGQVPMGLIKKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L + +++++++ + L + P + +L +
Sbjct: 61 AVLVDEVNKLLQDNLNNYLVEEKLDVLGNP-------LPKQQDNFNWDSEELAFEFELGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDK--VTVDYT 178
P+ E+S + D+K ID Q+ I K K+ + + V+
Sbjct: 114 APEFEVSLKTKKAIPHYKIVADKKMIDDQVTRIRKQYGKLVAKKEITAGDEVTGTFVNEA 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+++ D SK + + + + + K ++ +
Sbjct: 174 AEIEHKTTLDLSKVKSKKALSALKGSKPGDTVTLKTKGLLTEDYLLASTLGIDREQAEDL 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + F+I+EV P +N +L +L ++IK+ SE +Q+ +++L
Sbjct: 234 NIEVEFNIEEVNERQPAELNQELFDKLFGPGNVTSEKEMRERIKEDSEGQFQQQSDQKLL 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++ + L E ++ + E+ +++ +
Sbjct: 294 NDVTEQLIESTQFDL------------PREFLKKWMQTTGEKPLSPEEASDEFERSEKGL 341
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQS----ALYQQLGRFPG------HEKKMLDHFQKYPNA 408
++ G + +++ +++ +E++ + Q+ ++ + +
Sbjct: 342 RYQLIEGKLIKEHGLDIQFDELKEFAKGFIRSQMAQYGQTDPKEEDLENIAGRVMGNREE 401
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ L + K++ + + ++V +DQ
Sbjct: 402 VKRLSEQLMSQKLLSLYKEKANLKVKEVNYDQFVKE 437
>gi|193214764|ref|YP_001995963.1| trigger factor domain [Chloroherpeton thalassium ATCC 35110]
gi|238692716|sp|B3QXY8|TIG_CHLT3 RecName: Full=Trigger factor; Short=TF
gi|193088241|gb|ACF13516.1| trigger factor domain [Chloroherpeton thalassium ATCC 35110]
Length = 431
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 67/436 (15%), Positives = 165/436 (37%), Gaps = 19/436 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K ++EL++ + +++ + ++KA++KGFR GK PL IK + G+
Sbjct: 1 MESKFKQLSDTEQELEISFSPDEFQPELDKQYKLAQAKAHLKGFRKGKAPLQMIKKMLGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++E+ + + + D + + I E + L + L Y++
Sbjct: 61 DIQYQVVEELAGKNFESVAKENDLKLVGQAKIRHYE---------LAENEKLSIYLIYEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P E+ F++ + + +V ++ +++++ ++ ++ E + D V D
Sbjct: 112 HPAFELKPFNEYEFKKAEYQVSDETVEKELKKLLQSKGNMVAVEGAAAPTDIVIGDVQKL 171
Query: 181 V-DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D + + ++N F + S L G+ G +E KK
Sbjct: 172 DADGTAIVGERQENQSFRLEYMKDDSPFFTALNGVNKG--EERRVEVEVKEEDVPEENKK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
S+KE+ + ++L E+ R ++I+ + + +
Sbjct: 230 QTFLISVKEIKRMELPELTDELVKELSRGKNETVQDFRDELRKQIEAYFTNKSEEDLMES 289
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ + F P SL++ + +L + ++ A + + A++
Sbjct: 290 VAQKFLEENVFTAPSSLIKMYEDMLLDNAKRQIGGAFPPGFD----ETYYRAEIRPNAEK 345
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
++ I E N IEV+++++++ ++ + + + +
Sbjct: 346 HARWMLIRNKIAELNGIEVSDDDIKALAEKEAKLTGAEATEEFVNTYFSEQYKPYVIDTL 405
Query: 417 FEDKVIDHILKSVQIV 432
DK+ + I + +I
Sbjct: 406 LRDKIYEFIKANTKIE 421
>gi|15639497|ref|NP_218947.1| trigger factor [Treponema pallidum subsp. pallidum str. Nichols]
gi|189025736|ref|YP_001933508.1| trigger factor [Treponema pallidum subsp. pallidum SS14]
gi|12230724|sp|O83519|TIG_TREPA RecName: Full=Trigger factor; Short=TF
gi|238689323|sp|B2S3A0|TIG_TREPS RecName: Full=Trigger factor; Short=TF
gi|3322798|gb|AAC65494.1| trigger factor (tig) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189018311|gb|ACD70929.1| trigger factor [Treponema pallidum subsp. pallidum SS14]
gi|291059883|gb|ADD72618.1| trigger factor [Treponema pallidum subsp. pallidum str. Chicago]
Length = 442
Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 69/441 (15%), Positives = 165/441 (37%), Gaps = 28/441 (6%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
Q + EL+V++ + +E+ +A + GFR GKVPL+ ++ YG +
Sbjct: 4 QKKFTALAQSQVELEVVVAREDAQRHYQRFVEEYLERARLPGFRKGKVPLAVLERKYGSA 63
Query: 62 ILSET----IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I + +++ ++E + RPS+ + + D +
Sbjct: 64 IRQDAAAALMEKALEEGFAQASQDSQPLPISRPSLK--------KKPVFDPDEDFSFAVI 115
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV-- 175
YD+ P +E+ + ++ V E+++ R++ I + N K +S
Sbjct: 116 YDVFPSVELRNTSGFSLSVPTVSVTEEDVSRELTRIQERNALVTDKGADSCAEVGDIATV 175
Query: 176 -DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+ V + + V F +G + + ++G+K G +
Sbjct: 176 DYHEVDDSGAVRPGTERAGVVFTLGVEEGPFALGQDILGMKLGQRCLF------AKRAGM 229
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQK 292
L + ++ ++K + ++++LA F + + Q + + E + +
Sbjct: 230 LKDEAAQVRVTLKALKQRQLPSLDDELAQDVSDAFRTLDDLTRSVRQNLAEALEAALHEY 289
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHM 352
+RQ+L + + F +PESLV E V + + Q +
Sbjct: 290 KRRQLLRILVRENPFSLPESLVVGEMESRWALVMRQF---GVSLSGTPQNKLQFFQQWRP 346
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
+ + +++ + ++ + V+ EE+++ + + E+++ +++ A L
Sbjct: 347 EVEEHLKQRVIVELLLKQEQVSVSAEEIETEYVRIASKTGSKEERVREYYAGEEKRRA-L 405
Query: 413 RAPIFEDKVIDHILKSVQIVD 433
I E K+ +L + +
Sbjct: 406 CEGIRERKLCQKLLGRC-VTE 425
>gi|326800321|ref|YP_004318140.1| trigger factor [Sphingobacterium sp. 21]
gi|326551085|gb|ADZ79470.1| trigger factor [Sphingobacterium sp. 21]
Length = 447
Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 77/463 (16%), Positives = 173/463 (37%), Gaps = 38/463 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + L ++V I TD N+ I++ KA + GFRPG VP SHIK YGK
Sbjct: 1 MNISQERVDDLNAVINVEITPADYTDRVNKAIKEQAKKAKLPGFRPGMVPASHIKKTYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+IL + I+ ++ + + L++ +P +S + + K + +
Sbjct: 61 AILFDEINRLVSDSLNNYLTENKVEVLGQPLPKEGS----ESSYNWDFNDEFKFQYEIGL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P E+ + +VTQ +VD++ + ++ + K+ E + + +
Sbjct: 117 APAFEVPFSEKDKVTQYDIKVDDETLASRIKNLRKSYGKMTNPEVSEDGDVLYSTLTQLD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL----- 235
LE D + + L+GLK D+ +I+
Sbjct: 177 ASGNTLEGGISNTASVRTDLVDD-KKIKKSLIGLKKDDEVKIDLKKAFKDDTIARILNIT 235
Query: 236 -----AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
A + +K V +N +L +L + E ++ E ++
Sbjct: 236 EEEAAALTEGTFKLVVKNVNRLEEADLNQELFDKLFGKDEVKTEEEFKARVTSEVESMLV 295
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
Q +++ + N + + + +R + + N+K + + + D
Sbjct: 296 QNSDQRLQQDLYNL-------GMEKVNVQFPDEFLRKWLKATNEKLTDEELSEGYDDFV- 347
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRF---PGHEKKMLDH-- 401
+ + ++ I +N +E+ EE+ + + Q + P E+++ +
Sbjct: 348 -----KNLKWTLIENKIITENKLEIKYEEVFKLAKERIAAQFKMYSPEPISEEQLAQYTV 402
Query: 402 -FQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
F + L + KV D + V++ +++ +++ +
Sbjct: 403 QFLQDKEQANRLFEEVKALKVFDFLKGVVKLNKKEIDYNKFLE 445
>gi|225551649|ref|ZP_03772595.1| trigger factor [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
gi|225379464|gb|EEH01829.1| trigger factor [Ureaplasma urealyticum serovar 8 str. ATCC 27618]
Length = 472
Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 101/480 (21%), Positives = 207/480 (43%), Gaps = 23/480 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSK----ANIKGFRPGKVPLSHIKS 56
M+++ K E V+I + NE E + K I GFRPGKVP+ K
Sbjct: 1 MKLLNKIKNENSIEFQVLIEKSEWEKKHNEAFEKVAKKTASKLKIPGFRPGKVPVEEAKK 60
Query: 57 LYGK-SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLR 115
+ + T ++++ + + ++DE S T++ DI +L L+
Sbjct: 61 HVNEIEVFETTTNDLVPQALT--FLEQDESFTSDNSETVDTPSIDILDFK---DGELTLK 115
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIA--KNNVAFEVKETESEIGDKV 173
+ YD+ P I S++DL +T + E + E++ ++ K+ + + E GD+V
Sbjct: 116 IVYDLYPVATIDSYNDLVLTPIVNEAFDHEVNAEIEHALSSKSQRRVKDENELIEKGDEV 175
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
D+ +DNV + S K+ +GS + ++GLK G+QK +E FP+D+
Sbjct: 176 RFDFKGMIDNVPFQGGSAKDHLLTIGSNQFIPGFEDQMIGLKVGEQKNLEVKFPDDYHAT 235
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVR 290
DLAG+ IKE+ S P +N++ A + ++ +I +
Sbjct: 236 DLAGRSAVFEVLIKEITSVKPQELNDEFAKSFNLPNVNTVQELKDYIHNQIVLAKQERNS 295
Query: 291 QKVKRQILDYI-SNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEE 345
++ +I + + +P+SL++ E + + Q+V ++S Q + + +
Sbjct: 296 ERAWLEIAQQLLAKAKVTPIPQSLIDREVSTLKQQVISQLSQYKIDLKQYLEFSKKSESQ 355
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ AK + +++ I E I V+++E++ + + + G E+ +++ +
Sbjct: 356 FQEDLVKQAKETIALALLVDDIAENQKIVVSDDEVKERIAEMAKLYQGEEEAIIERLSQN 415
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
P+A+ E + KV+++++ + K T L + K ++K +
Sbjct: 416 PDAVKEF---LLHKKVVNYLIDLNKNNQPKDTASTLSKQEDKPKVAKAKTSNTKKVASKK 472
>gi|28493450|ref|NP_787611.1| trigger factor [Tropheryma whipplei str. Twist]
gi|28476491|gb|AAO44580.1| trigger factor [Tropheryma whipplei str. Twist]
Length = 437
Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 74/442 (16%), Positives = 166/442 (37%), Gaps = 45/442 (10%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ I + + +L V IPS L + ++ ++ GFR GKVP+ I GK
Sbjct: 6 KSIVQRVSETELKLQVTIPSESLKPHVDRAYREVAKTVSVPGFRRGKVPVRIIDQRIGKH 65
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L I++ I + + ++ P + I S E L++ +
Sbjct: 66 VVLDRAINDCIGDFFQSAVDEQGLTPVAAPK-------AHIASLPTEPDASLEVVFDVHV 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P ++ +F++ Q+ D +V + +D ++ I + F + + GD + +D +
Sbjct: 119 YPDVDFPAFENKQIEVDAIDVTDSMVDSEIVGIREKLATFTALDRPAIDGDFLILDLQIL 178
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL----- 235
+ +L + + V + +GS LF L + G I+ P + +
Sbjct: 179 DGDKVLSESNA--VPYELGSNTLFDGLDSALTSARAGYTTTIDLTPPVEDPAGENPQQDQ 236
Query: 236 ---AGKKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQ 291
+G R+ + V N++LA + GF + +R ++ I++ F
Sbjct: 237 FAKSGDTRRVKLKVSSVNKRDLPEENDELARLVGGFANLEELRKDSAKNIERSMLFQRSL 296
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+ + +L+ + ++ TF +P + + DE +
Sbjct: 297 QARDLLLEQLLSEITFLLPGPIADVL-------------------------DEIKDEEEK 331
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
++ I+L + + ++ + E+E++ L + ++ K
Sbjct: 332 QNRTKQARRDILLDLLAKTFSVTLKEDELERYLSSAAAQRKMSVATLVSVI-KSAGQDKY 390
Query: 412 LRAPIFEDKVIDHILKSVQIVD 433
+ + I +K + L V+++D
Sbjct: 391 VISDIVRNKALSIALSRVKVID 412
>gi|189501105|ref|YP_001960575.1| trigger factor [Chlorobium phaeobacteroides BS1]
gi|238692276|sp|B3ENK5|TIG_CHLPB RecName: Full=Trigger factor; Short=TF
gi|189496546|gb|ACE05094.1| trigger factor [Chlorobium phaeobacteroides BS1]
Length = 427
Score = 145 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 90/444 (20%), Positives = 172/444 (38%), Gaps = 24/444 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ +++L++ + + T + +E+ R IKGFR G VP IK + G
Sbjct: 1 MQKNINNVSDTEQKLEITLSAEEFTPEIDLEVENARKTIQIKGFRKGHVPAGMIKKVMGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + +++ + EI + + A R + L + LSY+I
Sbjct: 61 AIEASVAEKLASKYFVEISESENIKPASRAELENYSF----------DGDTLSITLSYEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P E++ F D QDI V ++++++++ I K + ET +E D + D
Sbjct: 111 HPDFEVNDFKDYTFVQDIYAVTDEDVEKEINLITKGHGTLVPVETPAEAKDTIIADLEKY 170
Query: 181 VD-NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D I+E Q +N F + + LVG K+G++ ++ E
Sbjct: 171 DDSGNIIEGQKTENYSFNLEYLPEDNPFHNALVGKKSGEKVTVDIEGKEKGEE------T 224
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
R ++KEV +NN+L F+S R +++QH Q +
Sbjct: 225 YRYEVTVKEVKRLELPELNNELVKEISQEKFDSVEDFRTDVRGQLEQHFSNKSEQDLLES 284
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I + P S+V++ N +L+ + +M + + A++
Sbjct: 285 ISARFIEENPVPTPSSMVDSFENMLLENAKRQMGGQLPPGMD----ENGFRDSVRPNAEK 340
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
++ I E N++EVT++++++ + + P + L + I
Sbjct: 341 HARWMLISQKIAENNSLEVTDDDIKAYAENEAEKNPELNAEELLKTYMSTEFRDYMTDTI 400
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQ 440
+DK+ I SV I +
Sbjct: 401 LKDKIYTIIKSSVTINAENKPLPE 424
>gi|11120335|gb|AAG30851.1|AF296129_1 trigger factor [Aquifex aeolicus]
Length = 445
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 84/432 (19%), Positives = 188/432 (43%), Gaps = 14/432 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + EGL + L V I + + + +E + ++ I+GFR GK PL +++ Y
Sbjct: 1 MKVEVQDREGLFKALTVEIQGDSVKEKIDEMYKQLQKTVQIQGFRKGKAPLWIVRAKYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E +I E + + L + + + + E + E +K +S+++
Sbjct: 61 YVEEEVGKKIADETLQKALEEANLKPVADVFLEKVE--------VDEKEGKVKYVVSFEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ ++L+V E E + ++ + + N +E K+ + +
Sbjct: 113 APEFELKDVENLEVEVPKIEFKEDYVKEELERLREANAVWEPKDENEPAQEGDMLVVEYE 172
Query: 181 VDNVILEDQSKKNVQ-FIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
V+ + E + K I+G L E E L G K G++ E++ D K++
Sbjct: 173 VEEIGGEGEKVKQETSVILGQGMLRPEVEEALKGKKVGEEVELKELPLYDQEGKEVGKVN 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ IKE+ + +N++ A LG+ S + + IKQ E L Q ++ ++ D
Sbjct: 233 I--KIKIKEIKKKVLPELNDEFAKELGYASLKDLEEKIREDIKQKLEKLKEQVIEERVAD 290
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + VP++L+ E + ++ + E+ + ++ VD ++ ++ +A+ +
Sbjct: 291 KLVEIHDIPVPQTLLRRELSFLVDRRLRELQALGIDTRYVDI--KKIVEEVQPIAEANIK 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+L ++ IE T E++++ + ++ ++ +F++ N +
Sbjct: 349 LRFILDKYAQEKGIEPTGEDIEAQYKELAEQYGTTVDEIKKYFKEN-NLEQVVYEDARRK 407
Query: 420 KVIDHILKSVQI 431
K + I+ V+I
Sbjct: 408 KALKEIISKVKI 419
>gi|168007184|ref|XP_001756288.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692327|gb|EDQ78684.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 561
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 72/455 (15%), Positives = 172/455 (37%), Gaps = 32/455 (7%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGK-VPLSHIKSLYG-K 60
V E + + +L V +PS+ D + + + + +A I GFR GK VP S + G
Sbjct: 107 VKETGLDHSRVQLKVQVPSSVCKDCYEQVLREFSKQAKIPGFRSGKDVPESVLIDHVGAD 166
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I S ++ ++K +PE +S R+ + + + L L+ D+
Sbjct: 167 QIRSSAVEAVLKRTLPEAMSSVAGRSLKDSEHILTKFSDLVDD--FVPEKSLSYELAVDV 224
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAE---------------IAKNNVAFEVKET 165
P++ + + + + E + E + A + E+ +
Sbjct: 225 APEVRWNPENGYKNLKVKVECEANEAEAARKAADAELQSRLKDLGSLQAISGRGMEMGDV 284
Query: 166 ESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERF 225
++ + + I + K G E LVG++ G+ + +
Sbjct: 285 AIIDVSATRLNEDGTAGDEIFSCKQKGFQLDTDGGGSFLPGFVEALVGIQIGETRTFDLT 344
Query: 226 FPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQ 283
FPE + L G + R KE+F+ ++++LA + + ++ + +K +
Sbjct: 345 FPETWEQESLRGLQARFTVEGKELFTRQIPELSDELAPQLVANCTNIPEVKEVLLKKHAE 404
Query: 284 HSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV---- 339
E + +Q + + + ++ ++P SL+E + + E+ ++ + ++
Sbjct: 405 QVERVKKQATRFAVANALTRVVDVEIPNSLLEEQGRQMYAAKLIELQASMKLPRDQLVAL 464
Query: 340 --DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK 397
+ + L V + + I ++ N+++++EE+ + + F ++++
Sbjct: 465 SSAEMVQNYLDAQRSRISDSVKQSLAVAEIYKQENLKISDEELDMEVNSAIEEFKRYDQE 524
Query: 398 MLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
+ R + KV+D + + I
Sbjct: 525 -----YDDARVREQARELLEGSKVLDWLTEHADIT 554
>gi|120434591|ref|YP_956874.1| trigger factor [Gramella forsetii KT0803]
gi|117576741|emb|CAL65210.1| trigger factor [Gramella forsetii KT0803]
Length = 440
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 67/455 (14%), Positives = 169/455 (37%), Gaps = 31/455 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + V I + ++D R ANI GFR G VP+ +K YG+
Sbjct: 1 MNITRENIDELNAVVKVDIAKEDYAGKVEKILKDYRKNANIPGFRKGHVPMGMVKKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L + ++++++E + + L++ P D I
Sbjct: 61 AVLVDEVNKLLQESLNKYLTEEKLDVLGNP-------LPKEQESFDWEKDDYSFEFELGI 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +++ VT+ DEK ++ Q+ I K + K+ +E
Sbjct: 114 APEFDVNLDLKKPVTKYNIVADEKMVNDQIESIQKQYGKLKTKDEVAEGDTVAGTFKNEE 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK-- 238
+N++ ++ LKT E + SI+
Sbjct: 174 EGIENDTTIELENIKGKRNLNKFVGAKVGDVITLKTKSLFEDDHALVNHLSIEHDKSHDL 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++F+I E+ ++ +L +L E + +KIK+ + Q+ +Q++
Sbjct: 234 DIEVDFTISEINERELADLDQELFDKLFGEGKVTSVTELKEKIKEDAAKQFEQQSDQQLM 293
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ I+ + L + ++ + EE+ + + +++ +
Sbjct: 294 NDITEALIEAIDFEL------------PKDFLQKWIQTVGEKPLTEEEAKEEYEKSEKGL 341
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPGHE------KKMLDHFQKYPNA 408
++ G + NN+ V ++++ + QQ+ +F + + +
Sbjct: 342 RYQLIEGKVVNDNNLNVDFNDLKAFASEKIKQQMAQFGQMDPSQKELDDIAARILSNQDE 401
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ L + +K++ ++++ ++++T+++
Sbjct: 402 VKRLSEQLMNEKLLGFYKENMKFDEKELTYEEFVK 436
>gi|171920878|ref|ZP_02696291.2| trigger factor [Ureaplasma urealyticum serovar 13 str. ATCC 33698]
gi|188524517|ref|ZP_03004512.1| trigger factor [Ureaplasma urealyticum serovar 12 str. ATCC 33696]
gi|198273602|ref|ZP_03206137.1| trigger factor [Ureaplasma urealyticum serovar 4 str. ATCC 27816]
gi|225550656|ref|ZP_03771605.1| trigger factor [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
gi|171903089|gb|EDT49378.1| trigger factor [Ureaplasma urealyticum serovar 13 str. ATCC 33698]
gi|195659605|gb|EDX52985.1| trigger factor [Ureaplasma urealyticum serovar 12 str. ATCC 33696]
gi|198249630|gb|EDY74411.1| trigger factor [Ureaplasma urealyticum serovar 4 str. ATCC 27816]
gi|225379810|gb|EEH02172.1| trigger factor [Ureaplasma urealyticum serovar 2 str. ATCC 27814]
Length = 472
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 101/480 (21%), Positives = 208/480 (43%), Gaps = 23/480 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSK----ANIKGFRPGKVPLSHIKS 56
M+++ K E V+I + NE E + K I GFRPGKVP+ K
Sbjct: 1 MKLLNKIKNENAIEFQVLIEKSEWEKKHNEAFEKVAKKTASKLKIPGFRPGKVPVEEAKK 60
Query: 57 LYGK-SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLR 115
+ + T ++++ + + ++DE S T++ DI +L L+
Sbjct: 61 HVNEIEVFETTTNDLVPQALT--FLEQDESFTSDNSETVDTPSIDILDFK---DGELTLK 115
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIA--KNNVAFEVKETESEIGDKV 173
++YD+ P I S++DL +T + E + E++ ++ K+ + + E GD+V
Sbjct: 116 IAYDLYPVATIDSYNDLVLTPIVNEAFDHEVNAEIEHALSSKSQRRVKDENELIEKGDEV 175
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
D+ +DNV + S K+ +GS + ++GLK G+QK +E FP+D+
Sbjct: 176 RFDFKGMIDNVPFQGGSAKDHLLTIGSNQFIPGFEDQMIGLKVGEQKNLEVKFPDDYHAT 235
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVR 290
DLAG+ IKE+ S P +N++ A + ++ +I +
Sbjct: 236 DLAGRSAVFEVLIKEITSVKPQELNDEFAKSFNLPNVNTVQELKDYIHNQIVLAKQERNS 295
Query: 291 QKVKRQILDYI-SNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEE 345
++ +I + + +P+SL++ E + + Q+V ++S Q + + +
Sbjct: 296 ERAWLEIAQQLLAKAKVTPIPQSLIDREVSTLKQQVISQLSQYKIDLKQYLEFSKKSESQ 355
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ AK + +++ I E I V+++E++ + + + G E+ +++ +
Sbjct: 356 FQEDLVKQAKETIALALLVDDIAENQKIVVSDDEVKERIAEMAKLYQGEEEAIIERLSQN 415
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
P+A+ E + KV+++++ + K T L + K ++K +
Sbjct: 416 PDAVKEF---LLHKKVVNYLIDLNKNNQPKDTASTLSKQEDKPKVAKAKTSNTKKVASKK 472
>gi|157414502|ref|YP_001481758.1| trigger factor [Campylobacter jejuni subsp. jejuni 81116]
gi|172047015|sp|A8FJZ4|TIG_CAMJ8 RecName: Full=Trigger factor; Short=TF
gi|157385466|gb|ABV51781.1| trigger factor (peptidyl-prolyl cis /trans isomerase, chaperone)
[Campylobacter jejuni subsp. jejuni 81116]
gi|315932000|gb|EFV10953.1| trigger factor [Campylobacter jejuni subsp. jejuni 327]
Length = 444
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 89/433 (20%), Positives = 182/433 (42%), Gaps = 16/433 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP+S + Y +
Sbjct: 1 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYER 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + K V L + + ++ L
Sbjct: 61 ELTQDAEQNLFKSAVNSALQELK-------KESKELVGEPYFEKFDRKDGEIIAELILSF 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
P+I++ ++ L +V +KEID + E+ K E +T+ + GD D+
Sbjct: 114 KPEIKLDGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKRVLKEGDFAKFDFE 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD+ E +N +GS + +VG+K G++K+I+ FP+++ LAGK
Sbjct: 174 GFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----RQKV 293
+ E+ +++++ +L E A + +K+K+ + ++
Sbjct: 234 DAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDEL 293
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQYYHM 352
K + D + KY FD+P+ +VE E + ++ S + + +E +
Sbjct: 294 KGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKE 353
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V ++ + + IEV ++E+ A+Y + R+ + K+ L++++K AL +
Sbjct: 354 EAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKK-QGALPAV 412
Query: 413 RAPIFEDKVIDHI 425
+ + E+K+ + I
Sbjct: 413 KMALIEEKLFNDI 425
>gi|185178886|ref|ZP_02964659.1| trigger factor [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
gi|188024266|ref|ZP_02996962.1| trigger factor [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
gi|188518599|ref|ZP_03004051.1| trigger factor [Ureaplasma urealyticum serovar 11 str. ATCC 33695]
gi|195868014|ref|ZP_03080009.1| trigger factor [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
gi|184209142|gb|EDU06185.1| trigger factor [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
gi|188018931|gb|EDU56971.1| trigger factor [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
gi|188997799|gb|EDU66896.1| trigger factor [Ureaplasma urealyticum serovar 11 str. ATCC 33695]
gi|195660306|gb|EDX53568.1| trigger factor [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
Length = 472
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 101/480 (21%), Positives = 207/480 (43%), Gaps = 23/480 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSK----ANIKGFRPGKVPLSHIKS 56
M+++ K E V+I + NE E + K I GFRPGKVP+ K
Sbjct: 1 MKLLNKIKNENAIEFQVLIEKSEWEKKHNEAFEKVAKKTASKLKIPGFRPGKVPVEEAKK 60
Query: 57 LYGK-SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLR 115
+ + T ++++ + + ++DE S T++ DI +L L+
Sbjct: 61 HVNEIEVFETTTNDLVPQALT--FLEQDESFTSDNSETVDTPSIDILDFK---DGELTLK 115
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIA--KNNVAFEVKETESEIGDKV 173
+ YD+ P I S++DL +T + E + E++ ++ K+ + + E GD+V
Sbjct: 116 IVYDLYPVATIDSYNDLVLTPIVNEAFDHEVNAEIEHALSSKSQRRVKDENELIEKGDEV 175
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
D+ +DNV + S K+ +GS + ++GLK G+QK +E FP+D+
Sbjct: 176 RFDFKGMIDNVPFQGGSAKDHLLTIGSNQFIPGFEDQMIGLKVGEQKNLEVKFPDDYHAT 235
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVR 290
DLAG+ IKE+ S P +N++ A + ++ +I +
Sbjct: 236 DLAGRSAVFEVLIKEITSVKPQELNDEFAKSFNLPNVNTVQELKDYIHNQIVLAKQERNS 295
Query: 291 QKVKRQILDYI-SNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEE 345
++ +I + + +P+SL++ E + + Q+V ++S Q + + +
Sbjct: 296 ERAWLEIAQQLLAKAKVTPIPQSLIDREVSTLKQQVISQLSQYKIDLKQYLEFSKKSESQ 355
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ AK + +++ I E I V+++E++ + + + G E+ +++ +
Sbjct: 356 FQEDLVKQAKETIALALLVDDIAENQKIVVSDDEVKERIAEMAKLYQGEEEAIIERLSQN 415
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
P+A+ E + KV+++++ + K T L + K ++K +
Sbjct: 416 PDAVKEF---LLHKKVVNYLIDLNKNNQPKDTASTLSKQEDKPKVAKAKTSNTKKVASKK 472
>gi|86153794|ref|ZP_01071997.1| trigger factor [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85842755|gb|EAQ59967.1| trigger factor [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 457
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 90/436 (20%), Positives = 184/436 (42%), Gaps = 22/436 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP+S + Y +
Sbjct: 14 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYER 73
Query: 61 SILSETIDEIIKEIVPEILSK---RDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + + K V L + ++ P ++ L
Sbjct: 74 ELTQDAEQNLFKSAVNNALQELKKENKELVGEPYFE----------KFDRKDGEIIAELI 123
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTV 175
P+I++ ++ L +V +KEID + E+ K E +T+ + GD
Sbjct: 124 LSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKRALKEGDFAKF 183
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ VD+ E +N +GS + +VG+K G++K+I+ FP+++ L
Sbjct: 184 DFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHL 243
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----R 290
AGK + E+ +++++ +L E A + +K+K+ +
Sbjct: 244 AGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVN 303
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQY 349
++K + D + KY FD+P+ +VE E + ++ S + + +E
Sbjct: 304 DELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDS 363
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A++ V ++ + + IEV ++E+ A+Y + R+ + K+ L++++K AL
Sbjct: 364 FKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKK-QGAL 422
Query: 410 AELRAPIFEDKVIDHI 425
++ + E+K+ + I
Sbjct: 423 PAVKMALIEEKLFNDI 438
>gi|57237198|ref|YP_178210.1| trigger factor [Campylobacter jejuni RM1221]
gi|86149712|ref|ZP_01067942.1| trigger factor [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88597372|ref|ZP_01100607.1| trigger factor [Campylobacter jejuni subsp. jejuni 84-25]
gi|205356560|ref|ZP_03223323.1| trigger factor (peptidyl prolyl cis /trans isomerase chaperone)
[Campylobacter jejuni subsp. jejuni CG8421]
gi|218561872|ref|YP_002343651.1| trigger factor [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|9297122|sp|Q46108|TIG_CAMJE RecName: Full=Trigger factor; Short=TF
gi|67461626|sp|Q5HWX5|TIG_CAMJR RecName: Full=Trigger factor; Short=TF
gi|57166002|gb|AAW34781.1| trigger factor [Campylobacter jejuni RM1221]
gi|85839980|gb|EAQ57239.1| trigger factor [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88190433|gb|EAQ94407.1| trigger factor [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359578|emb|CAL34362.1| trigger factor (peptidyl-prolyl cis /trans isomerase, chaperone)
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|205345565|gb|EDZ32205.1| trigger factor (peptidyl prolyl cis /trans isomerase chaperone)
[Campylobacter jejuni subsp. jejuni CG8421]
gi|284925485|gb|ADC27837.1| trigger factor [Campylobacter jejuni subsp. jejuni IA3902]
gi|315057630|gb|ADT71959.1| Cell division trigger factor [Campylobacter jejuni subsp. jejuni
S3]
gi|315928125|gb|EFV07443.1| trigger factor [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315930201|gb|EFV09316.1| trigger factor [Campylobacter jejuni subsp. jejuni 305]
Length = 444
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 90/436 (20%), Positives = 184/436 (42%), Gaps = 22/436 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP+S + Y +
Sbjct: 1 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYER 60
Query: 61 SILSETIDEIIKEIVPEILSK---RDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + + K V L + ++ P ++ L
Sbjct: 61 ELTQDAEQNLFKSAVNSALQELKKENKELVGEPYFE----------KFDRKDGEIIAELI 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTV 175
P+I++ ++ L +V +KEID + E+ K E +T+ + GD
Sbjct: 111 LSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKRALKEGDFAKF 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ VD+ E +N +GS + +VG+K G++K+I+ FP+++ L
Sbjct: 171 DFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----R 290
AGK + E+ +++++ +L E A + +K+K+ +
Sbjct: 231 AGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQY 349
++K + D + KY FD+P+ +VE E + ++ S + + +E
Sbjct: 291 DELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDS 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A++ V ++ + + IEV ++E+ A+Y + R+ + K+ L++++K AL
Sbjct: 351 FKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKK-QGAL 409
Query: 410 AELRAPIFEDKVIDHI 425
++ + E+K+ + I
Sbjct: 410 PAVKMALIEEKLFNDI 425
>gi|330836758|ref|YP_004411399.1| Trigger factor [Spirochaeta coccoides DSM 17374]
gi|329748661|gb|AEC02017.1| Trigger factor [Spirochaeta coccoides DSM 17374]
Length = 452
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 86/450 (19%), Positives = 192/450 (42%), Gaps = 17/450 (3%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
K EL + I + + ++ E + KA IKGFR GK PLS ++ +G++I
Sbjct: 6 KIKELGNSSVELTLTITAADIEAAYKELLATYGKKAQIKGFRTGKAPLSVLEGKFGQAIR 65
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E+ +++ V +++ +++ P T + + D+ + YD++P
Sbjct: 66 EESTFNTLEKTVQAAVAEIEDQFKPLPYSTPVLQNEESL-LPFKPDTDITFSVVYDVIPA 124
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
E+ ++ L V EV + +++++ ++ N K+ GD VTVDYT +
Sbjct: 125 FELPAYKGLTVEAPKVEVTDDLVNKEIEQLRDQNALVREKDGTVANGDVVTVDYTELDAD 184
Query: 184 VILEDQSK-KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ + K+ F VGS F + E ++G+ ++K E+ +P D+ + D AGK + L
Sbjct: 185 KNEIENTARKDFTFTVGSGYNFYKIDEDIIGMAKDEEKIFEKTYPADYDLPDYAGKTIAL 244
Query: 243 NFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++K V + ++++ A + +++ + + +K+++H + + + + D
Sbjct: 245 KATVKNVKTRELPELDDEFAQDVKEEYKTVADLVKATREKLEEHLKTHLDETKLSALTDK 304
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLAKR 356
I VP S++ E K + + Q + E + + A +
Sbjct: 305 ILETVDIPVPASMIRIEVEQNWNKFVRQSGLNEEQVLKFLQFQNQTKESVMDEWKEPAAK 364
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ ++L I E N ++ ++E+ A + + + + + + +
Sbjct: 365 SLKVQLLLDKIKEAENFQIDDKELAEA---EAEQLKDITDEAQKTYYRD-----MILDDL 416
Query: 417 FEDKVIDHILKSVQIVD-RKVTFDQLFDNS 445
KV +L++ ++ +T+DQ +
Sbjct: 417 KFRKVGPFLLENNTFIEGEPLTYDQFIQGA 446
>gi|307747144|gb|ADN90414.1| Trigger factor [Campylobacter jejuni subsp. jejuni M1]
Length = 444
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 89/433 (20%), Positives = 182/433 (42%), Gaps = 16/433 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP+S + Y +
Sbjct: 1 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYER 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + K V L + + ++ L
Sbjct: 61 ELTQDAEQNLFKSAVNSALQELK-------KESKELVGEPYFEKFDRKDGEIIAELILSF 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
P+I++ ++ L +V +KEID + E+ K E +T+ + GD D+
Sbjct: 114 KPEIKLDGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKRALKEGDFAKFDFE 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD+ E +N +GS + +VG+K G++K+I+ FP+++ LAGK
Sbjct: 174 GFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----RQKV 293
+ E+ +++++ +L E A + +K+K+ + ++
Sbjct: 234 DAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDEL 293
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQYYHM 352
K + D + KY FD+P+ +VE E + ++ S + + +E +
Sbjct: 294 KGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKE 353
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V ++ + + IEV ++E+ A+Y + R+ + K+ L++++K AL +
Sbjct: 354 EAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKK-QGALPAV 412
Query: 413 RAPIFEDKVIDHI 425
+ + E+K+ + I
Sbjct: 413 KMALIEEKLFNDI 425
>gi|139437043|ref|ZP_01771203.1| Hypothetical protein COLAER_00177 [Collinsella aerofaciens ATCC
25986]
gi|133776690|gb|EBA40510.1| Hypothetical protein COLAER_00177 [Collinsella aerofaciens ATCC
25986]
Length = 437
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 77/446 (17%), Positives = 163/446 (36%), Gaps = 24/446 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + K V IP+ + + + +D K GFR GK P I S G
Sbjct: 7 NITASDVKDAKLTATVTIPAADVDAAIKKAYKDTAKKYRFPGFRAGKAPRPVIDSALGAE 66
Query: 62 I-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
L++ +++I P +L++ D + L + D + + +
Sbjct: 67 ATLAQATNDLIAANEPAVLNELDIVP--------TKNGDYKELDLAKDHEDYTYTVEFSL 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P E+SSFD +++ EV E EI+ Q+ + FE E + + +
Sbjct: 119 RPAAELSSFDAVEIEMPPAEVTESEINNQVEMLLNYRATFEDVEGRAVEAEDYVTVDLKA 178
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V+N ++ + + I GS +E E L+G D K + D + + +
Sbjct: 179 VENA--DNFAAEGRMLIAGSDSNPAEFNEALIGANVDDVKTVTWT---DEAEEGEEAETH 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ ++K + + ++L F+S AMR +I+Q + + + + +
Sbjct: 234 TVEVTVKGIKVRNTPELTDELVKSDFGFDSIDAMRDAIKIEIEQDKASRLPAEKESRCVS 293
Query: 300 YISNK-----YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
++ + D +S+ E L + + + E+ + H A
Sbjct: 294 ALAERLQLDEMDADYEQSVFEELGQNFLSNLAARGMTLDTWLPASGLTMEQFIGDLHKQA 353
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ L + + IEVTE+++ + + + + + +R
Sbjct: 354 NDVARESLALDALARELKIEVTEDDINAEFEK----AGVKDVEASKAEFIADGRMPAVRE 409
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQ 440
I K +DH++++ ++ + T
Sbjct: 410 SIRRSKAVDHLVENAKVTEVDETAKD 435
>gi|305665187|ref|YP_003861474.1| FKBP-type peptidyl-prolyl cis-transisomerase [Maribacter sp.
HTCC2170]
gi|88709939|gb|EAR02171.1| FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor)
[Maribacter sp. HTCC2170]
Length = 462
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 69/456 (15%), Positives = 171/456 (37%), Gaps = 31/456 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + L + V I + D + + D R +ANI GFR G VP+ IK YGK
Sbjct: 23 MNITKEQIDDLNAVVKVAITKDDYQDKVDNILSDYRKQANIPGFRKGHVPMGLIKKQYGK 82
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L + +++++++ + + L++ P L +
Sbjct: 83 AVLVDEVNKLLQDNLNKYLTEEKLDVLGNP-------LPKQQDNFDWDNDQLDFEFELGL 135
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDK--VTVDYT 178
P E+S +T D+K ++ Q+ I K K+ + + +
Sbjct: 136 APSFEVSLKTKKSLTHYKIVADKKMVNDQVLRIQKQYGKLVSKKEIGKDFEVLGTFANEA 195
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++N + + + + + + K +++ S +
Sbjct: 196 EEIENKTTLELDQIKSKKALDILLGKKVGDIVSLKTKGLFKEDYLVSSVLGISQEKAKDI 255
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++FSI+E+ P ++ +L +L + +IK+ SE Q+ +++L
Sbjct: 256 NIEVSFSIEEINDREPAKLDQELFDKLFGKDTVTSEKELKDRIKEDSEKQFEQQSDQKLL 315
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ I+ + + L E + ++ S+ +E + +++ +
Sbjct: 316 NDITEYFIENTKFEL------------PSEFLTKWIQTTGEKSLSDEQANEEYEKSEKGL 363
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQS----ALYQQLGRFPG------HEKKMLDHFQKYPNA 408
++ G I + N+I++ +E++ + Q+ +F + + +
Sbjct: 364 RYQLIEGKIIKDNDIQIQFDELKEFAKGFIKSQMAQFGQLNPQEEELENIATRVLGNQDE 423
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ L + K+I+ + V + ++VT++
Sbjct: 424 VKRLSEQLMSQKLINLYKEKVNLKAKEVTYENFVKE 459
>gi|89889547|ref|ZP_01201058.1| cell division trigger factor [Flavobacteria bacterium BBFL7]
gi|89517820|gb|EAS20476.1| cell division trigger factor [Flavobacteria bacterium BBFL7]
Length = 442
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 67/463 (14%), Positives = 166/463 (35%), Gaps = 36/463 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + L L + + + ++ + D R ANI GFR G VP S I+ Y
Sbjct: 1 MNIKRTDIDALNALLTLTVEKADYQEQVDKLLADYRKTANIPGFRKGHVPASLIRKKYRT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
IL E I+++I++ + E ++K + P + D I
Sbjct: 61 PILVEEINKMIQQQLNEYITKEELELLGNP-------LPKAQEDINWDADDFTFEFELGI 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
PQ ++ +TQ + D+ ++RQ+ I + K+T +E + V
Sbjct: 114 APQFDVDVKGKKAITQYEIKTDDDTLNRQIDRIREQYGKLIAKDTVAEGNEVTGVFRNDD 173
Query: 181 VDNVILEDQSKKNV----QFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
D + +T E+ D ++ F DH
Sbjct: 174 EDINSDATFKTDKIKGKTNLKKFVGSKVGDTLELKTKSLFEDDHDLMNFLKVDHDKAH-- 231
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
G +++ F I EV +N + +L + + +++++ + Q+ ++
Sbjct: 232 GLDIKVTFEITEVNERELAEMNQEFFDKLFGPGVISSKEELMERLREDAGRQFSQQTDQK 291
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L ++ + L + + + + EE+ + +++
Sbjct: 292 LLTDVTEGLIENTKFDL------------PADFLKRWIANSGENPMTEEEAAAEYERSEK 339
Query: 357 RVLTGIVLGTIGEKN-NIEVTEEEMQSA----LYQQLGRFP------GHEKKMLDHFQKY 405
+ ++ I + N ++++ EE++ + Q+ ++ ++ +
Sbjct: 340 GLRYQLIESKILKTNPDLQLKFEELKDYSRTQIKAQMAQYGHTDASDEEIDGVVARIMQN 399
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
+ + + +K++ + ++ +++T+++ + ES
Sbjct: 400 QEEVKRMSEQLQNEKMLQFFKDNAKLKKKELTYEEFIKEAYES 442
>gi|282860203|ref|ZP_06269277.1| trigger factor [Prevotella bivia JCVIHMP010]
gi|282587024|gb|EFB92255.1| trigger factor [Prevotella bivia JCVIHMP010]
Length = 455
Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats.
Identities = 49/455 (10%), Positives = 154/455 (33%), Gaps = 17/455 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + + +++ + + ++D R +ANI GFRPG+VP+ IK +G
Sbjct: 1 MNISFENPDKINGLMTIVVEEADYKEEVEKALKDYRKRANIPGFRPGQVPMGLIKRQFGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + +++++ E + + ++ + +P + + D +E +
Sbjct: 61 QLKMDAVNKLLGENLQKYIADNKIQMLGQPMASEKQDAVD-----LEKEAPYTFMFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD--YT 178
P+ + + +V EVD+K ID+Q+ ++ E +
Sbjct: 116 APEFKAALSGKDKVAYYEIEVDDKMIDQQVEMFQSRAGHYDKVEEFDADKRDMLKGDLRE 175
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + LE ++ + + G K GD + +++
Sbjct: 176 LDANGNTLEGGLTIEGASLMPQYIKVEDQKNLFNGAKLGDIITWNPCAAYPENDAEVSSL 235
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ E + ++ + + K E R+ + +
Sbjct: 236 LKIKKEEVAEHTGNFSYQITEISRFVNAENNKELWVSVYGEDAKIEDEAAFRKHIADGLA 295
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + + + + + + N E ++ + + + +
Sbjct: 296 TQLEGDSNYKFIQDVRTHMEKKVGKLAFPDELLKRIMLANNQEKGAEFVEKNYENSIKEL 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF----QKYPNA 408
++ + I+V +++++ + Q ++ ++ L ++ K
Sbjct: 356 TWHLIKEQLAVAQGIKVEDKDIRDSAIQMARAQFAQYGMTNVPEEYLTNYADEMLKQREN 415
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ + K+ + + + V++ + ++ ++
Sbjct: 416 IDSFVEAALDRKLSEKLKEVVKLDKKTISLEEFNK 450
>gi|86151225|ref|ZP_01069440.1| trigger factor [Campylobacter jejuni subsp. jejuni 260.94]
gi|315123792|ref|YP_004065796.1| trigger factor [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
gi|85841572|gb|EAQ58819.1| trigger factor [Campylobacter jejuni subsp. jejuni 260.94]
gi|315017514|gb|ADT65607.1| trigger factor [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
Length = 444
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 89/433 (20%), Positives = 182/433 (42%), Gaps = 16/433 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP+S + Y +
Sbjct: 1 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYER 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + K V L + + ++ L
Sbjct: 61 ELTQDAEQNLFKSAVNSALQELK-------KESKELVGEPYFEKFDRKDGEIIAELILSF 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
P+I++ ++ L +V +KEID + E+ K E +T+ + GD D+
Sbjct: 114 KPEIKLDGYEKLIPEYQTPKVSKKEIDEKKDELLKRFSTPEAIKTKRALKEGDFAKFDFE 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD+ E +N +GS + +VG+K G++K+I+ FP+++ LAGK
Sbjct: 174 GFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----RQKV 293
+ E+ +++++ +L E A + +K+K+ + ++
Sbjct: 234 DAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDEL 293
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQYYHM 352
K + D + KY FD+P+ +VE E + ++ S + + +E +
Sbjct: 294 KGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKE 353
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V ++ + + IEV ++E+ A+Y + R+ + K+ L++++K AL +
Sbjct: 354 EAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKK-QGALPAV 412
Query: 413 RAPIFEDKVIDHI 425
+ + E+K+ + I
Sbjct: 413 KMALIEEKLFNDI 425
>gi|325268719|ref|ZP_08135348.1| trigger factor [Prevotella multiformis DSM 16608]
gi|324988963|gb|EGC20917.1| trigger factor [Prevotella multiformis DSM 16608]
Length = 455
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 58/460 (12%), Positives = 154/460 (33%), Gaps = 17/460 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + + + + D + ++D R AN+ GFRPG+VP+ +K YG
Sbjct: 1 MKISFENPDKVNGLMTITVEEADYKDEVEKTLKDYRKHANVPGFRPGQVPMGLVKRQYGM 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +TI++I+ E + + ++ + +P + +E + + +
Sbjct: 61 QVKMDTINKILGENLQKYIADNKIQMLGQPL-----APEAGEAVDLEKAAPYEFKFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD--YT 178
P+ I +V VD+K ID+Q+ ++ ET +
Sbjct: 116 APEFNIELSGKNKVDYYEIAVDDKLIDQQVEMFRSRAGHYDKAETFDPEQRDMLKGDLRE 175
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + LE ++ + ++ G K GD + +++
Sbjct: 176 LDENGNTLEGGITVEGASMMPQYIKVEDQKKLFDGSKLGDIITFNPTAAYPDNDIEVSSL 235
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ E + + G+ ++ E R+ + +
Sbjct: 236 LKIKKEEVAEHKGNFSYQITEISRFVKAENNAELWNGVYGEEAGIKDEAGFRKAIADGLK 295
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + + L + + + N EE ++ + + R +
Sbjct: 296 EQLKGDSDYKFIQDLRAYCEKKVGKLTFPDALLKRIMLANNKDKGEEFVEKNYEQSIREL 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF----QKYPNA 408
++ + + I+V + +++ + Q ++ L+ + K
Sbjct: 356 TWHLIKQQLAAAHGIKVEDNDVRESARQMARAQFAQYGMTNVPDDYLNGYADDMLKKREN 415
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
+ + K+ + + V++ + V+ ++ SE
Sbjct: 416 IDSFVEAALDRKLAAAVKEIVKLNVKSVSLEEFNKLVSEQ 455
>gi|219685262|ref|ZP_03540082.1| trigger factor [Borrelia garinii Far04]
gi|219673358|gb|EED30377.1| trigger factor [Borrelia garinii Far04]
Length = 452
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 74/447 (16%), Positives = 185/447 (41%), Gaps = 14/447 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + N + + + ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVVIRVSKNVIQEKYKSLLQDYSSRLKIQGFRIGKVPINIIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I + E + +R + I E ++ D + Y+ P+
Sbjct: 67 TVLEEVINDSFKEFFKEEPKRPLSYAAPIIKE-----KDLRLDLDKDFEFTFVYETYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY----TVS 180
EI + D L + ++ EV + D + E E + K ++ +
Sbjct: 122 EIPNVDSLDIEVEVPEVFIDDSDIDDEIRRLQIENSIIIEDEEGVVKKDSIVKVDFVELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ +++ F VG ++ + + ++G++ ++K +E+ + D+ K+LAG
Sbjct: 182 DLLNEILSTKRQDFVFTVGKSETYYDFDRDVIGMRINEEKVLEKSYITDYKFKELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +++++ A +++ ++ I E +
Sbjct: 242 KLKIKIKSIKKRDLPLIDDEFAQDISDRYDTLDDLKNFIRSDILNVIEEKKETLKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY-HMLAKRR 357
+S K D+P S++E E + + + +++
Sbjct: 302 SAVSEKLEIDIPHSMIEAEIEIAFKDTAKQNKIGLDEFKSIFYSSGYVGSVNLKDEILSN 361
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + +++ + + + IEVTE +++ + +Q +++ + + N ++ L+ I
Sbjct: 362 LKSKLIIQKMVDLDPIEVTESDLEDEIARQSENSGMSCEEIKKFY-EDQNLISYLKDDIK 420
Query: 418 EDKVIDHILKSVQ-IVDRKVTFDQLFD 443
+V IL +++ + ++V+F +
Sbjct: 421 RKRVKKRILANLKEVKGKQVSFKDFVN 447
>gi|116327861|ref|YP_797581.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
gi|116330745|ref|YP_800463.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
gi|122281501|sp|Q04TR5|TIG_LEPBJ RecName: Full=Trigger factor; Short=TF
gi|122284345|sp|Q052U7|TIG_LEPBL RecName: Full=Trigger factor; Short=TF
gi|116120605|gb|ABJ78648.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Leptospira borgpetersenii serovar Hardjo-bovis L550]
gi|116124434|gb|ABJ75705.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 451
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 86/428 (20%), Positives = 176/428 (41%), Gaps = 17/428 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K + ++ + ++ L +F++ + + I GFRPGK PL+ +K G
Sbjct: 1 MDYKTKKNSNATVDIKLTFEASDLEKAFDKTYAEKQKNIKIPGFRPGKAPLNMVKRHLGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ S+ I+ +I + + IL+K + P I + + +L Y+
Sbjct: 61 TVASDAINTLIVDGMASILTKLEHPMVRFPKFEIQDY---------QPGKNLIATAVYET 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV--AFEVKETESEIGDKVTVDYT 178
P+I + + ++V V + +I ++ I K + + GD + ++YT
Sbjct: 112 NPEITLGKYKKIKVKLPEVSVSDSDIFDEIENIRKQLARKQLKEDGQTAASGDIIDMEYT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V ++ S + + +G + E L GL GD+KE FPED+ ++AGK
Sbjct: 172 VCEKGQEPKNASNTSNDYHLGHENNLKGFDENLYGLGVGDRKEFSHTFPEDYLQNEVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE-SAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +IK ++ + V++DLA + ++ + +K+ E +R K +I
Sbjct: 232 TFEYSVTIKALYVNILPTVDDDLAAEFDGSDSLNTLKDKIRKNLKERFEEGIRNKKLEEI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHML 353
I + + P+S V+ E + + E + + + ++D + + L
Sbjct: 292 FKEIIDDSKYIFPDSYVKEESEHVFHNMIHEFKLPHITMEKYAKMIKKDLKEVQESFRNL 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ R+ I E N+ TE + + L + + + + +K + + R
Sbjct: 352 AENRLKHFFTRQKIAEIENVTYTETDFDADLEKLASSYQIPLSDLKEELEK-GKLMDQYR 410
Query: 414 APIFEDKV 421
F KV
Sbjct: 411 ENFFAKKV 418
>gi|154148587|ref|YP_001405638.1| trigger factor [Campylobacter hominis ATCC BAA-381]
gi|166229031|sp|A7HZE7|TIG_CAMHC RecName: Full=Trigger factor; Short=TF
gi|153804596|gb|ABS51603.1| trigger factor [Campylobacter hominis ATCC BAA-381]
Length = 437
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 79/445 (17%), Positives = 173/445 (38%), Gaps = 21/445 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ K + IP+ + + NE + K I GFRPGK P++ + Y K
Sbjct: 1 MEISAKLTNSANALASTKIPTASINEKVNELAKQTAKKVRIDGFRPGKAPVAAVLKRYKK 60
Query: 61 SILSETIDEIIKEIVPEILS---KRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + ++I + V E L K P + E E + + +
Sbjct: 61 ELEDDAKNDIFRNFVDESLKILGKEKNEILGEPIFSKYE----------EKDGIIDVEMK 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVD 176
P+++I ++ V +KEID ++ E E + E E GD D
Sbjct: 111 MSFRPEVKIDGYEKFIPEFATPRVTKKEIDEKINEFLLMIAPLEKSDKEVLEKGDFAKFD 170
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ VD+ + ++ +GS + ++G+K ++++I+ FPE++ ++LA
Sbjct: 171 FEGFVDDKPFDGGKAQDYVLEIGSGRFIPGFEDGMLGMKIDEERDIKVKFPENYQAENLA 230
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQK-VKR 295
GK + E+ ++++ RL + + +IK+ K +
Sbjct: 231 GKDAIFKVKLHEIQCKKIGELDDETLKRLMPGEKEPSKEKFEAQIKEQIRADKMAKLINE 290
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED-----LQYY 350
++ ++ + + E + K + + ++D +
Sbjct: 291 ELKPKFADIIVENFIFDMPEIILEQEIDLQFRNAWGTFSKEEIENFRKDKDALTKKRDEF 350
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A + V ++ I + I+V+++E+ SA+Y + R+ KK L+ ++ L
Sbjct: 351 RDEAVKSVKMTFLIDEIAKDRKIQVSDQELVSAVYMEAYRYGMDPKKHLEEYRTN-GYLP 409
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRK 435
++ + E+K+ + I + ++
Sbjct: 410 VVKMALLEEKLFNDIFSKDKKSEKT 434
>gi|294101896|ref|YP_003553754.1| trigger factor [Aminobacterium colombiense DSM 12261]
gi|293616876|gb|ADE57030.1| trigger factor [Aminobacterium colombiense DSM 12261]
Length = 456
Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats.
Identities = 89/466 (19%), Positives = 187/466 (40%), Gaps = 22/466 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ E + V + S N + ++ K N+ GFR GKVP + ++ GK
Sbjct: 1 MRSELVSQEKNFVTIKVELEVTEFQKSINMTVRELTQKINVPGFRKGKVPRNILEMRVGK 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E ++ I+ + + +I+ + +P + I + +E D+ L L+++
Sbjct: 61 EGILIEALESIMPDTIDQIVKDYELDLIDQPEMEIEK---------LEEGKDVLLTLTFE 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ + +++ + V ++ +D + + K N E + E D V ++Y
Sbjct: 112 VAPEVKLPELETIEIEKLKVNVTDEMVDEAIKNMQKQNAEHEKVDRAVEDDDVVEIEYVT 171
Query: 180 SV---DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+V + I++ V +G DL E L G ++ E ED++ ++A
Sbjct: 172 NVLDEEGEIIKSHEPATVNVDLGLQDLRPGIKEALKGHVANEKVEATVQVEEDYADPEVA 231
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKV 293
G+++R + SIKE+ + + +SE A R ++
Sbjct: 232 GREIRYDMSIKEIKVKKLPPLEAAFFEKTLGHSVDSEEAFREEVKNRLVDRMTQESDTMA 291
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSS-----ANQKSQNVDSIDEEDLQ 348
+ + +++K ++PE+L+ + I ++ + E+
Sbjct: 292 ENAAVAKVADKTEVELPETLINRQIEHIKKEDTENAQKRFNKTMEEILAESGMELEDYES 351
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
A+R V +VL + E +I + +E+ +S + + +L K N
Sbjct: 352 RVKDQAERAVRQYLVLDALSESFDISIEKEDFESEVEPLATAYNISTDTLLRSVFKDQNR 411
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLL 454
+ E+ + I K +L V I + + F L N+ E E+
Sbjct: 412 VMEMGSRIRYKKTTKELLSKVSIKEVE-KFSSLEKNTEEDIAEQAE 456
>gi|260591255|ref|ZP_05856713.1| trigger factor [Prevotella veroralis F0319]
gi|260537120|gb|EEX19737.1| trigger factor [Prevotella veroralis F0319]
Length = 454
Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats.
Identities = 60/459 (13%), Positives = 159/459 (34%), Gaps = 17/459 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + + + + + + + ++D R +ANI GFR G+VP+ IK YG
Sbjct: 1 MKISFENPDKVNGLMTITVEESDYKNEVEKTLKDYRKRANIPGFRQGQVPMGMIKRQYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + I++I+ E + + ++ + +P + + +E + + +
Sbjct: 61 QVKMDVINKILGENLQKYITDNKIQMLGQPMSSEAQ-----KPVELEQPAPYEFKFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD--YT 178
P+ ++ ++ EVD+K ID+Q+ ++ ET +
Sbjct: 116 APEFKLELSGKNKIDFYEIEVDDKLIDQQVEMFQSRAGHYDKAETFDPEQRDLLKGDLRE 175
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + LE ++ + ++ G K GD + +++
Sbjct: 176 LDENGNTLEGGITVEGASLMPQYIKVEDQKKLFDGAKVGDIITFNPTAAYPDNDIEVSSL 235
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ E + + + + + + E R+ + +
Sbjct: 236 LKIKKEEVAEHKGNFSYQITEISRFVKAENNAELWKSVYGEDTEIKDEAAFRKAIADGLK 295
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + + L + + N EE ++ + + + +
Sbjct: 296 EQLKGDSDYKFVQDLRAYCEKKVGDLTFPDALLKRIMLANNQDKGEEFVEKNYEQSIKEL 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF----QKYPNA 408
++ + + NNI+V + +++ + Q ++ + L+ + K
Sbjct: 356 TWHLIKEQLAQANNIKVDDNDVRESARQMARAQFAQYGMTNVPEDYLNGYADEMLKKREN 415
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ + K+ I K V++ + VT D+ SE
Sbjct: 416 IDSFVEAALDRKLAAAIKKVVKLNTKTVTLDEFNKLVSE 454
>gi|159900400|ref|YP_001546647.1| trigger factor domain-containing protein [Herpetosiphon aurantiacus
ATCC 23779]
gi|238687056|sp|A9AUT1|TIG_HERA2 RecName: Full=Trigger factor; Short=TF
gi|159893439|gb|ABX06519.1| trigger factor domain [Herpetosiphon aurantiacus ATCC 23779]
Length = 481
Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats.
Identities = 76/477 (15%), Positives = 169/477 (35%), Gaps = 48/477 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + L++ + + N+ + I SK I GFR GK P +++ YGK
Sbjct: 1 MKVTTEQLPKRIVALEIEPDAATIEKELNKAAQRIASKVAIPGFRKGKAPRFIVENYYGK 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPS----------------ITINEGESDITS 103
+IL E DEII L + + + + S + D +
Sbjct: 61 AAILEEATDEIINVAFRAALEQENIKPVAQASLEKLEPEPFRFRILVPVEPEVILPDYKA 120
Query: 104 GLIEGTVDLKLRLSYDIL--------------------------PQIEISSFDDLQVTQD 137
++ T + + ++ + D + + +
Sbjct: 121 ITVDLTEEPVTDATLEVALDQAREKHVVLSAPEGEPEAAEGDQLTATVQTLVDGVPLHKL 180
Query: 138 ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFI 197
E D+ + D + ++ + + + + D D D+ +D + I
Sbjct: 181 DEEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEGEPTTLI 240
Query: 198 VGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVV 257
+ + E L G+K G+ +EI P DH +A K V ++ E+ +
Sbjct: 241 MEERRIVPELYAGLKGIKAGETREISAHLPADHPDARVADKDVVFKVTVSEIQNRQLPAW 300
Query: 258 NNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENE 317
+ A + +++ ++S R+ V Q L+ + +FDVP++L+
Sbjct: 301 EELPGLEEFEGDLDAYKADLMERLVKNSGDHHRRNVLNQYLEEVVAATSFDVPDALIAER 360
Query: 318 YNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNI 373
+ +L + ++ + +E +Q + + + +V+ I E +
Sbjct: 361 AHELLHEQVESLARYGINMEQYLQIVGKTHDEAVQELLPRGEESLKSSLVVRKIVEAEGL 420
Query: 374 EVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ 430
V E E+ + + + L FP ++ + ++ + + K+ D +++
Sbjct: 421 SVDESEINAEIERILNDFP-DAQRGPARRRLEKELRPQVAGSLLDKKLQDRLVELAT 476
>gi|24215260|ref|NP_712741.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Leptospira
interrogans serovar Lai str. 56601]
gi|45657292|ref|YP_001378.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|41018229|sp|Q8F351|TIG_LEPIN RecName: Full=Trigger factor; Short=TF
gi|67461810|sp|Q72SG7|TIG_LEPIC RecName: Full=Trigger factor; Short=TF
gi|24196350|gb|AAN49759.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Leptospira
interrogans serovar Lai str. 56601]
gi|45600530|gb|AAS70015.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 451
Score = 143 bits (359), Expect = 6e-32, Method: Composition-based stats.
Identities = 87/443 (19%), Positives = 191/443 (43%), Gaps = 19/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K + ++ + ++ + +F++ E+ + I GFRPGK PL+ +K G
Sbjct: 1 MDYKTKKNSNATVDIKLTFEASDIEKAFDKTYEEKQKNVKIPGFRPGKAPLNMVKRHLGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ S+ I+ +I + + ILSK + P I + + +L Y+
Sbjct: 61 SVASDAINTLIVDGMTSILSKLEHPMIRFPKFEIQDY---------QPGKNLIATAIYET 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV--AFEVKETESEIGDKVTVDYT 178
P+I + + +++ V + ++ ++ ++ KN + + + GD + ++YT
Sbjct: 112 NPEITLGKYKKIKIKLPEVSVSDLDVSEEVEKVRKNLARKQLKEEGQAAVAGDIIDMEYT 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V ++ + + +G + E L G+K+G++K+ FPED+S ++AGK
Sbjct: 172 VCEKGQESKNSGNTSNDYHLGHENNLKGFDENLYGMKSGEKKDFVHTFPEDYSQNEVAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGF-ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +IK +++ + V++DLA ES + ++ + +K+ E V+ K +I
Sbjct: 232 TFEYSVTIKALYANILPAVDDDLASEFDGSESLNVLKDKIRKNLKEGFEDRVKNKKLDEI 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHML 353
I + + PES + E + + E + + ++ ++D + + L
Sbjct: 292 YKEIIDDSKYVFPESYLREESEHVFHNMIHEFKLPHMTMEKYANMVQKDLKEVQESFQKL 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A+ R+ I E NI +E++ + L + + + +K + + R
Sbjct: 352 AETRLKHYFTRQKIAEIENISYSEQDFDADLEKLASSYQISLSDLKKELEK-GKLMEQYR 410
Query: 414 APIFEDKVIDHILKSV--QIVDR 434
F K+ + + V + D+
Sbjct: 411 ENFFAKKIDNILFDLVEKKYTDK 433
>gi|294672819|ref|YP_003573435.1| trigger factor [Prevotella ruminicola 23]
gi|294471634|gb|ADE81023.1| trigger factor [Prevotella ruminicola 23]
Length = 453
Score = 143 bits (359), Expect = 7e-32, Method: Composition-based stats.
Identities = 62/457 (13%), Positives = 161/457 (35%), Gaps = 15/457 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + ++ + L + + D+ +++++ R KA + GFRPG VP+ IK YG
Sbjct: 1 MKISFECADKINGLLTMTVEKADYQDAVEKQLKNYRKKAQVPGFRPGMVPMGMIKKQYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + +++++ E + E + + + P + E DL +
Sbjct: 61 AVKVDEVNKLLGEKLYEYVRENKIQMLGEPLPNQEKQ----VPQDFENADDLTFVFDIAV 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + ++ +VD+K +D Q+ A F E S +
Sbjct: 117 APEFKAELTGRDKIDYYTIKVDDKMLDDQVQMYASQAGEFVKAEVFSGNDTLTGDMRELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E ++ + + ++ G K GD + ++A
Sbjct: 177 ENGNTKEGGITTEAAMVMPAYIKADDQKKLFDGAKAGDIITFNPKKAYPDNDAEVAALLK 236
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+K++ + + + E + + + + E R K+ I
Sbjct: 237 VKKEEVKDLNADFSFQITE-IRHFQPAEVDQKLFDRVFGEGEVKDEKAFRAKIAEGIAPQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + ++ + + E QN + ++ + + +
Sbjct: 296 LQQNSDYKFLLDVRKHMEKKVGKLEFPEALLKRVMLQNNQDKGADFVEKNFEGSIKELAW 355
Query: 361 GIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + NI+V E ++ + A+ Q ++ +L+++ K +
Sbjct: 356 HLIKEQLVAAQNIKVEEADIKNVAKEAMRAQFAQYGMSNVPDDVLENYANEQLKKRENID 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ K+ + + V++ ++VTF++ +E
Sbjct: 416 NFVDRAVDVKLTEALKNVVKLNAKEVTFEEFNKLMTE 452
>gi|219684385|ref|ZP_03539329.1| trigger factor [Borrelia garinii PBr]
gi|219672374|gb|EED29427.1| trigger factor [Borrelia garinii PBr]
Length = 450
Score = 143 bits (359), Expect = 7e-32, Method: Composition-based stats.
Identities = 76/451 (16%), Positives = 188/451 (41%), Gaps = 14/451 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M K G K E+ + + N + + + ++D + I+GFR GKVP++ I++ Y +
Sbjct: 1 MSKDIKLLPGSKVEVIIRVSKNVIQEKYKSLLQDYSYRLKIQGFRIGKVPINIIENKYSE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + ++++I + E + +R + I E ++ D + Y+
Sbjct: 61 GLKATVLEKVINDSFKEFFKEEPKRPLSYAAPIIKE-----KDLRLDLDKDFEFTFVYET 115
Query: 121 LPQIEIS--SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P+ EI D++V +D+ +ID ++ + N E D +
Sbjct: 116 YPEFEIPSVDSIDIEVEVPEVFIDDSDIDNEIRRLQIENSIIIEDEEGVVKKDSIVKVDF 175
Query: 179 VSVDN--VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
V +D+ + +++ F VG ++ + + ++G++ ++K +E+ + D+ ++LA
Sbjct: 176 VELDDLLNEILSTKRQDFVFTVGKSETYYDFDRDVIGMRINEEKVLEKSYITDYKFEELA 235
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
G +L IK + +++++ A + + ++ I E
Sbjct: 236 GSSRKLKIKIKSIKKRDLPLIDDEFAQDISDRYNTLDDLKNFIRSDILNVIEEKKETLKL 295
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY-HML 353
+ IS K D+P S++E E + + + + +N+
Sbjct: 296 NKFFSTISEKLEIDIPHSMIEAEIEIAFKDIAKQNKMGLNEFKNIFYSSGYVGGVNLKDE 355
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
+ + +++ + + + IEVTE +++ + +Q +++ + + N ++ L+
Sbjct: 356 ILSNLKSKLIIQKMVDLDPIEVTESDLEDEIARQSENSGMSCEEIKKFY-EDQNLISYLK 414
Query: 414 APIFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
I +V IL +++ + ++V+F +
Sbjct: 415 DDIKRKRVKKRILANLKEVKGKQVSFKDFVN 445
>gi|83816587|ref|YP_446771.1| trigger factor [Salinibacter ruber DSM 13855]
gi|119370933|sp|Q2RZ60|TIG_SALRD RecName: Full=Trigger factor; Short=TF
gi|83757981|gb|ABC46094.1| trigger factor [Salinibacter ruber DSM 13855]
Length = 462
Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats.
Identities = 79/461 (17%), Positives = 181/461 (39%), Gaps = 32/461 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ ELD+ ++ L E + R +++GFR GKVPL +K ++G+
Sbjct: 1 MDTTLSKASPVEYELDLHATADELEPKLKEALNAQRKNMDVQGFRKGKVPLGLVKKMHGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRD-ERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+I ++ ++E E + + D +P++ E DL+ L +
Sbjct: 61 AIGYRVAEQFVQEAFEEEVEETDAIEPLGQPTL---------VDLDYELDADLQATLRFG 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV---AFEVKETESEIGDKVTVD 176
+ P +E+ +++T E+ E++++ ++ + K E + E + +
Sbjct: 112 VRPGVELEDLSSVEITMLDPEITEEDVEDEIERLRKEEADLLPLEEEAAEDTDYVNIDLQ 171
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ + +++ F + L E E LVG K GD +E
Sbjct: 172 RIDPDTDTPIIGDKDEDLTFFLDDDRLKEELREALVGQKAGDTFRVELPQEHPAHEHAGH 231
Query: 237 GKKVR---------LNFSIKEVFSPLPVVVNNDLAV---RLGFESESAMRGLCSQKIKQH 284
G ++ +V ++ + + A R +++++
Sbjct: 232 GHPHEHEGDGEDRLYEVTVNDVKRRDLPPLDEEFVRRVTEGELDDLEAFRNDIRERLQEA 291
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE 344
R+ + +++D + + VPES++E + +++V E N D +E
Sbjct: 292 WNERAREMAQGEVIDKMLELHPVPVPESVIEGYLDSFVKQVEEE----NDGELPEDFDEE 347
Query: 345 EDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPG-HEKKMLDHFQ 403
Q A+ + ++ I E+ ++EV+ EE+Q+ +Q G +++ +Q
Sbjct: 348 HFRQRNRRDAEDQGRWMLIRDQIVEEQDLEVSNEEIQTFFAEQSGGEEQVTAQQIEQFYQ 407
Query: 404 KYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
P + ++ I DKV D + + + + + ++ +
Sbjct: 408 TMPQMMEKVEQQILSDKVYDFLFDRLDVESK--SREEFEEE 446
>gi|313633489|gb|EFS00312.1| trigger factor [Listeria seeligeri FSL N1-067]
Length = 254
Score = 143 bits (359), Expect = 8e-32, Method: Composition-based stats.
Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 11/262 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG +L I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + P + I E L
Sbjct: 61 EALYQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESM---------EKGETWVLTADVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L+V + E+ +E++ ++ ++ + VKE D V +D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRDEELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNND 260
V + E+ + ++++
Sbjct: 232 PVVFKVKLHEIKTKEVPALDDE 253
>gi|228472333|ref|ZP_04057099.1| trigger factor [Capnocytophaga gingivalis ATCC 33624]
gi|228276536|gb|EEK15260.1| trigger factor [Capnocytophaga gingivalis ATCC 33624]
Length = 443
Score = 142 bits (358), Expect = 8e-32, Method: Composition-based stats.
Identities = 60/457 (13%), Positives = 148/457 (32%), Gaps = 35/457 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + L + + I + +E + R A+I GFR G +P+ IK YG+
Sbjct: 1 MNISKEQIDALNAVITLEIDKSDYQKKVDEALNSYRKNASIPGFRKGHIPMGMIKKQYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + ++++I + + + +S +P N E D S +
Sbjct: 61 AIQVDEVNKLISDSLNKFVSDEKLELLGQPIPKENAPEVDWDSDHH------TFVFEIGL 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD---KVTVDY 177
PQ I + +V +KE+D Q+ + + E ++ +
Sbjct: 115 APQFSIDLST--PIDYYQIKVTDKEVDTQIEHLRTRFGSLVPTEKVAKNSQISGIFFNEA 172
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
++ + F V + D + + H +
Sbjct: 173 QNIDKEYSFLAEALTDKAFEVIKDKAVGDQLSFSTKELFKDPHVLMQALGVPHEVVHSLD 232
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+V I+ + + ++ +L +K+++ ++
Sbjct: 233 IEVTFT--IESIQEVVLATMDEAFFAQLYPNENITTEEDFRKKVEEGIREEFTVNSDTRL 290
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + L + +Q + Q +++ +++
Sbjct: 291 LDDATEMLIEKTSFDLPKEFLIRWIQATSENPITEEQAAEDY------------KNSEKG 338
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFP------GHEKKMLDHFQKYPN 407
+ ++ G I ++NN++VT E++ + Q+ R+ +++ K
Sbjct: 339 LRYQLIEGKIIQENNLQVTYPEIREFAEKAIRAQIARYGLTDVEQAQIDTFVNNTLKNEQ 398
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
L + + K+I + + ++ D +
Sbjct: 399 ELNRIHRELTGGKLIQFYKEKANLNKIEIDVDAFIEK 435
>gi|283955634|ref|ZP_06373127.1| trigger factor [Campylobacter jejuni subsp. jejuni 1336]
gi|283792859|gb|EFC31635.1| trigger factor [Campylobacter jejuni subsp. jejuni 1336]
Length = 444
Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats.
Identities = 89/433 (20%), Positives = 181/433 (41%), Gaps = 16/433 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP+S + Y +
Sbjct: 1 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYER 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + K V L + + ++ L
Sbjct: 61 ELTQDAEQNLFKSAVNSALQELK-------KESKELVGEPYFEKFDRKDGEIIAELILSF 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
P+I++ ++ L +V +KEID + E+ K E +T+ + GD D+
Sbjct: 114 KPEIKLEGYEKLIPEYQTPKVGKKEIDEKKDELLKRFATPEAIKTKRALKEGDFAKFDFE 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD+ E +N +GS + +VG+K G++K+I+ FP+++ LAGK
Sbjct: 174 GFVDDKAFEGGKSENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----RQKV 293
+ E+ ++ ++ +L E A + +K+K+ + ++
Sbjct: 234 DAVFKVKLHEIQELKIPELDEEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDEL 293
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQYYHM 352
K + D + KY FD+P+ +VE E + ++ S + + +E +
Sbjct: 294 KGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKE 353
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V ++ + + IEV ++E+ A+Y + R+ + K+ L++++K AL +
Sbjct: 354 EAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKK-QGALPAV 412
Query: 413 RAPIFEDKVIDHI 425
+ + E+K+ + I
Sbjct: 413 KMALIEEKLFNDI 425
>gi|313623998|gb|EFR94095.1| trigger factor [Listeria innocua FSL J1-023]
Length = 268
Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats.
Identities = 62/270 (22%), Positives = 116/270 (42%), Gaps = 11/270 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG +L I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + + P + I E L
Sbjct: 61 EALYQDALDILLPEVYSQAIDEAGIDPVDTPQVNIESM---------EKGETWVLTADVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L+V + E+ +E++ ++ ++ + VKE D V +D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE 268
V + EV + ++++LA + E
Sbjct: 232 PVVFKVKLHEVKTKEVPALDDELAKDIDEE 261
>gi|315639063|ref|ZP_07894231.1| trigger factor [Campylobacter upsaliensis JV21]
gi|315480839|gb|EFU71475.1| trigger factor [Campylobacter upsaliensis JV21]
Length = 440
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 95/436 (21%), Positives = 186/436 (42%), Gaps = 22/436 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP+S + Y K
Sbjct: 1 MEVKAKQLDSVNAAASVKIPSGSINTEVENLAKKASKTIKMDGFRPGKVPVSAVLKRYEK 60
Query: 61 SILSETIDEIIKEIVPEILSKRD---ERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ ++ + K V L + + P E E+D +
Sbjct: 61 ELRNDAEQNLFKNAVDSALKELKKDLKELVGEPYFEKFERENDAIIAEL----------V 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTV 175
P++++ ++ +V +KEID + E+ K E +T+ + GD
Sbjct: 111 LSFKPELKLDGYEKCIPEFSTPKVSKKEIDEKKNELLKRYATTEAIKTKRALKEGDYAKF 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +D + +N +GS E +VG+K+G++K+I FP+++ +L
Sbjct: 171 DFEGFIDGKAFDGGKAENYVLEIGSKQFIPGFEEAMVGMKSGEEKDISVTFPKEYGAANL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----R 290
AGK + E+ +N +L +L E A L +K+K+ +
Sbjct: 231 AGKDAIFKIKLHEIQELKLPELNEELLKKLLPNEEKASEELLDEKLKEQIKNEKLFKLIN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKS-QNVDSIDEEDLQY 349
+++K + D + + FD+P+ ++E E + ++ S +K QN E
Sbjct: 291 EELKAKFADSLIETFEFDLPKGILEQEIDMQFRQAFGAFSEEEKKEIQNDKDKYEAKRNG 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ AK+ V ++ + + IEV+++E+ A+Y + R+ + K+ L++++K AL
Sbjct: 351 FKDEAKKSVKLTFIIDELAKLRKIEVSDQELVQAVYFEAYRYGFNPKEHLENYKK-QGAL 409
Query: 410 AELRAPIFEDKVIDHI 425
++ + EDK+ + I
Sbjct: 410 PAVKMALIEDKLFNDI 425
>gi|298207458|ref|YP_003715637.1| putative cell division trigger factor [Croceibacter atlanticus
HTCC2559]
gi|83850094|gb|EAP87962.1| putative cell division trigger factor [Croceibacter atlanticus
HTCC2559]
Length = 440
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 69/467 (14%), Positives = 172/467 (36%), Gaps = 47/467 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + V I +++ + +++ R ANI GFR G+VP+ +K YGK
Sbjct: 1 MNIKREDIDSLNAIVTVDIAKEDYSENVEKILKNYRKTANIPGFRKGQVPMGMVKKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L + +++++ + + + L++ P + D K +
Sbjct: 61 AVLVDEVNKLLDQALNKYLTEEKLDVLGNP-------LPKEQANFDWDADDYKFEFELGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ +T D+K ID Q+ I K E K+T +E +
Sbjct: 114 TPEFELDLQPKKAITSYKIIADDKMIDSQIERIQKQYGKLEAKDTVAEGDLVA-----GT 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD----------QKEIERFFPEDH 230
N ++ + + VG K GD + + +
Sbjct: 169 FKNEEEGIENTTTLPLEKLKG---KANLKKFVGAKVGDTISLKTKGLFEDDHDLMEFLKV 225
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
G + + F I E +P ++ +L +L + +KIK+ +E +
Sbjct: 226 EHDKAHGLDIPVTFEITEANKQIPAELDQELFDKLFGKDTVKTVTEMKEKIKEDAEGQFK 285
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
Q+ +Q+L +S + L ++ E + Q + +
Sbjct: 286 QQSDQQLLTDVSEYLIENTKFDLPAEFLQRWIKATSEEEITLEQSKEEYEK--------- 336
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPG------HEKKMLD 400
+++ + ++ + + NN+ V E++++ + Q+ +F + +
Sbjct: 337 ---SEKGLRFQLIEAKLIKDNNLNVNFEDLKAFAKDRIKMQMAQFGQMNPSDKELEDIAA 393
Query: 401 HFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ + + + ++++ ++V++ +++++++ E
Sbjct: 394 RVLGNQDEVKRMTEQLMNERLLGFYKENVKLKEKEMSYEDFVKEVYE 440
>gi|320450478|ref|YP_004202574.1| trigger factor [Thermus scotoductus SA-01]
gi|320150647|gb|ADW22025.1| trigger factor [Thermus scotoductus SA-01]
Length = 404
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 72/427 (16%), Positives = 166/427 (38%), Gaps = 39/427 (9%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SILSETI 67
G + ++ V +P ++ + + + D+ + I GFRPGK PL +++ G+ +LS+
Sbjct: 8 SGYRVKVRVEVPKEKVEERYQALLRDVAKRVRIPGFRPGKAPLKVVEARIGREELLSDLK 67
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
+ +++E P + + + + + + + P++++
Sbjct: 68 ERLVEETYPLAVQELGLLPVA----------ARVVEEELSEGEGFRYVAEVENYPEVQLP 117
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ + EV E+ +D+ + E+ + E++ D V V
Sbjct: 118 DWRSFDLQVAQEEVTEEMVDKALEELRHRYAELVPVDREAQEKDHVFVRTE--------- 168
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ +F + + E L+G + G+ + + K + I
Sbjct: 169 ----EGSEFPIDLSKALPHVREALLGKRAGEVVMVPVLNEKG-------EKVREVRTEIL 217
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
EV + ++++ A L ES +R + +K+ +E ++ +R L+ ++
Sbjct: 218 EVKTLELPKLDDEFAKTLEAESLEELREKVRESLKRQAEARYQEARERAFLEKLAEGLEA 277
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS------IDEEDLQYYHMLAKRRVLTG 361
++P S++E E +L+ + +++ + E+ + A +RV
Sbjct: 278 EIPPSMLEAEERHLLEHLAEDLARQGIPLEAYLKALEEKGEFEKFREELRQEALKRVKRS 337
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ + E+ EV+EEE Q+ L + +++ F + LA LRA +DK
Sbjct: 338 LAKERLAEELKPEVSEEEWQAYLQAVARSYGISLQELRREFGERG--LARLRAAYIQDKA 395
Query: 422 IDHILKS 428
+ L
Sbjct: 396 VKEALAK 402
>gi|126640548|ref|YP_001083532.1| trigger factor [Acinetobacter baumannii ATCC 17978]
Length = 356
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 67/347 (19%), Positives = 161/347 (46%), Gaps = 5/347 (1%)
Query: 103 SGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV 162
+ L + ++ P++E+ +FD L+V + E+ + ++D + + K + V
Sbjct: 5 EKVEHKEDALVFEATVEVYPEVEVKAFDGLEVERKTAEIKDADVDTMIENLQKQRQTWAV 64
Query: 163 KETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEI 222
+ ++ +VT D+ S+D E S ++ + ++GS + + ++G+K G++K I
Sbjct: 65 TKGMAKKDMQVTFDFEGSIDGEKFEGGSAEDFKLVLGSGRMIPGFEDGIIGMKAGEEKVI 124
Query: 223 ERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQ 279
+ FPED+ ++LAGK + ++K+V P ++ + G E ++ +
Sbjct: 125 DVTFPEDYQAENLAGKAAQFKITVKQVEKPKLPEIDAEFLKIFGVSEEEGIEKLKADVRK 184
Query: 280 KIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQN 338
+++ +R +VK+ D + +VP ++V E + Q++ + +
Sbjct: 185 NMEREVRNGLRNQVKQAAFDALVAANEIEVPAAMVAQEIDRQRQQMVQQFTQQFGGAGAQ 244
Query: 339 VDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKM 398
+ + A+R V G+++ + +EV + + + + + ++
Sbjct: 245 SFDKSMLPDELFKEQAERSVKLGVLVSKVLADAKLEVDQARVDAYIDDMASSY-EDPTEV 303
Query: 399 LDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
+++F+ A++ A + ED+V+DHIL S ++ D+ V+++ L
Sbjct: 304 IEYFKNDAQQRAQIEAVVLEDQVVDHILASAKVTDKAVSYEDLLKEQ 350
>gi|163753153|ref|ZP_02160277.1| putative cell division trigger factor [Kordia algicida OT-1]
gi|161326885|gb|EDP98210.1| putative cell division trigger factor [Kordia algicida OT-1]
Length = 442
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 64/456 (14%), Positives = 161/456 (35%), Gaps = 32/456 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + V I + +D E + D + ANI GFR G VP+ +K YGK
Sbjct: 1 MNITRENIDALNAVVTVNIEKDDYSDKVTEILTDYKKTANIPGFRKGHVPMGLVKKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L + ++++++E + + L + P + E +
Sbjct: 61 AVLVDEVNKLLQENLNKYLVEEKLDILGNPLPRMQE-------EFDWDAETFSFEFELGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV--TVDYT 178
P+ + ++TQ D+K ID Q+ I K ++ +E + +
Sbjct: 114 APEFT-VDLKENEITQYDIVADDKMIDGQIENIRKQYGKLISQDEVTEDSEVTGVFTNEE 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++ K + + + + K+ + + + D+
Sbjct: 173 KEIEENATFSLDKIKGKRNLNKFVGAKVGDTLTLKTKSLFNDDHDLMNFLKVAHDDVHDL 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++F I E + +N +L +L E KIK+ +E Q+ +++L
Sbjct: 233 DIEVSFKINEANTRELAELNQELFDKLFGEGNVTTVDEVKAKIKEDAERQFVQQSDQRLL 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++ + L + +S + E + + +++ +
Sbjct: 293 NDVTEGLIENTKFDL------------PADFLKKWIQSAGEQELTPEQAEEEYTKSEKGL 340
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFP------GHEKKMLDHFQKYPNA 408
++ + + N ++V E+++ + Q+ +F + +
Sbjct: 341 RYQLIQDRLVKDNEVQVQFEDLKEFSKQMIRAQMAQFGQMNPSDQELEDIAARILSNQEE 400
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ L + K+++ + + ++VT++
Sbjct: 401 VRRLTDQLLSQKLLELFKEKANLKKKEVTYENFVKE 436
>gi|148926358|ref|ZP_01810042.1| trigger factor (peptidyl-prolyl cis /trans isomerase, chaperone)
[Campylobacter jejuni subsp. jejuni CG8486]
gi|145844750|gb|EDK21855.1| trigger factor (peptidyl-prolyl cis /trans isomerase, chaperone)
[Campylobacter jejuni subsp. jejuni CG8486]
Length = 443
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 92/450 (20%), Positives = 187/450 (41%), Gaps = 22/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP+S + Y +
Sbjct: 1 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYER 60
Query: 61 SILSETIDEIIKEIVPEILSK---RDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + + K V L + ++ P ++ L
Sbjct: 61 ELTQDAEQNLFKSAVNSALQELKKENKELVGEPYFE----------KFDRKDGEIIAELI 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTV 175
P+I++ ++ L +V +KEID + E+ K E +T+ + GD
Sbjct: 111 LSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKRALKEGDFAKF 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ VD+ E +N +GS + +VG+K G++K+I+ FP+++ L
Sbjct: 171 DFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----R 290
AGK + E+ +++++ +L E A + +K+K+ +
Sbjct: 231 AGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQY 349
++K + D + KY FD+P+ +VE E + ++ S + + +E
Sbjct: 291 DELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDS 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A++ V ++ + + IEV ++E+ A+Y + R+ + K+ L++++K AL
Sbjct: 351 FKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKK-QGAL 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFD 439
++ + E+K+ + I KV+
Sbjct: 410 PAVKMALIEEKLFNDIFIPKTEKSEKVSKK 439
>gi|332878108|ref|ZP_08445838.1| trigger factor [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684070|gb|EGJ56937.1| trigger factor [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 451
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 59/453 (13%), Positives = 159/453 (35%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L + + D + ++D R KA++ GFRPG+VP+ +K +GK
Sbjct: 1 MNISLENIDKVSAVLTIKMEKADYADRVEKALKDFRRKASMPGFRPGQVPMGLLKKRFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I +E +++++ E + + + + P + + + + + +
Sbjct: 61 DITAEEVNKLLGEKLYAYIKENNLNILGEPLPSEDRQQ----DIDFDTMEEFSFAFDLAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + + V +VD+K ID Q+ + +++ ++ + +
Sbjct: 117 APEFKAELSGEDTVDYYDIQVDDKMIDGQVKMYTQRAGSYDHVDSYEAKDMVKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E + ++ E + G K D D ++A
Sbjct: 177 ENGNTKEGGVQVENAVLLPEYMKNDEQKAVFNGCKVNDVLVFNPNKAYDGHDVEIASLLK 236
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ + S V ++ E + +K SE R K+K + +
Sbjct: 237 IKKEDVPAMTSDFSFQV-QEITRFKEAELNQELFDQVFEKGTVTSEEAFRNKIKEILAEQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + N + + + + E+ ++ + + +
Sbjct: 296 FVADSDYKFILDVRTYLTNKVGKLEYPDAFLKRFMRVSNADKGEKFVEENYDKSIEELTW 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + + I+V +E++ + Q ++ ++MLD++ K + +
Sbjct: 356 HLIKEQLVKAYGIKVEKEDLIATAKNITKIQFAQYGMINVPEEMLDNYANEMLKKQDQVE 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L E+K+ + V++ ++++ +
Sbjct: 416 SLVNRSVENKLSAALKNVVKLNHKEISVEDFNK 448
>gi|225850858|ref|YP_002731092.1| trigger factor [Persephonella marina EX-H1]
gi|225645759|gb|ACO03945.1| trigger factor [Persephonella marina EX-H1]
Length = 446
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 88/434 (20%), Positives = 189/434 (43%), Gaps = 19/434 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + +GL R L + + + + +I NI GFR G VP + IK+ Y +
Sbjct: 1 MSVTVEE-KGLVRTLTIEEKGQEIKSLIDNVVREIAKNVNIPGFRKGHVPPAVIKARYKQ 59
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I E + I E + IL ++ P IT + E LK+++++++
Sbjct: 60 AIKEEVARKFISEKLQSILEEQKLSPVS-PDITFGDVEL--------SGDSLKMKVAFEV 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ ++ L++ EV ++++++ + + + + +++ + E E GD + + Y +
Sbjct: 111 APEFELKDYEGLEIEMIKHEVSDEDVEKAIQNLLEQHATYKLADKEVEDGDLIKIHYHIK 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ + + VG L E E + G K GD+ E + ++ K
Sbjct: 171 ---ADTGEEEEDEFEVAVGQGQLRPEIEEKIKGKKAGDEVTAENVSLYNEKGEEFG--KA 225
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ I EV + N++ + E+ + + ++ + ++++++I+D
Sbjct: 226 TVTVRILEVKEKVLPEFNDEFVKSINLGENVEEAKKKIKESLENQIKEAKERELEQKIID 285
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
++ +Y F+VP+SLV+ E +LQ+ ++ + K + A++ V
Sbjct: 286 KLAEQYDFEVPQSLVKAELEYLLQEYAKQLETYGIKPNQEMMA--AAAEGLKQTAEKNVR 343
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
V+ I EK I+V EEE+ + + + L + + + + I +
Sbjct: 344 VMFVINKIAEKEGIKVEEEEINREIENMAKAYNMTADQ-LKQYLEEKGLINNIIYSILKK 402
Query: 420 KVIDHILKSVQIVD 433
KV+D I + IV+
Sbjct: 403 KVLDLIKERANIVE 416
>gi|319953654|ref|YP_004164921.1| trigger factor [Cellulophaga algicola DSM 14237]
gi|319422314|gb|ADV49423.1| trigger factor [Cellulophaga algicola DSM 14237]
Length = 462
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 73/462 (15%), Positives = 169/462 (36%), Gaps = 43/462 (9%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ L + V + + D ++D R KA+I GFR G+VP+ IK YGK
Sbjct: 23 MNITKEQINELNAVVKVAVTKDDYQDKVETILKDYRKKADIPGFRKGQVPMGLIKKQYGK 82
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L E ++++I++ + + L++ P D + +
Sbjct: 83 AVLVEEVNKLIQDNLNKYLTEEKLDVLGNP-------LPKQRDNFNWDAEDFEFEFELGL 135
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY--- 177
P E+ +TQ D+K I+ Q+ I K K ++ + V V
Sbjct: 136 APSFEVDLKSKKAITQYKIVADDKMINEQVERIQKQYGTLTNKTEVTKKDEVVGVFKNEE 195
Query: 178 -----TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
+++ L+ + + D+ + +T+ L G + E
Sbjct: 196 EEIENKATLEISTLKSKKATDALVGAKVGDVITISTKGLFGE------DQELAAALGIQA 249
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQK 292
V ++F+I+E+ P ++ +L +L + KIK+ SE Q+
Sbjct: 250 DKAEKLAVDVSFTIEEINEREPAKLDQELFDKLFGKDVVTSEDGLKTKIKEDSEQQFTQQ 309
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHM 352
+++L+ I+ + L + + + +++ +
Sbjct: 310 ADQKLLNDITENFIDTTKFEL------------PADFLKKWIQVTGEKVLTDDEATTEYE 357
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQS----ALYQQLGRFPG------HEKKMLDHF 402
+++ + ++ G I +NN++V +E++ + Q+ +F +
Sbjct: 358 KSEKGLRYQLIEGKIITENNLQVQFDELKEFSKGFIKTQMAQFGQLNPAEEELDNIAARV 417
Query: 403 QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ + L + K++ + + ++VT++
Sbjct: 418 LSNQDEVKRLSEQLMSQKLLTLYKEKANLKTKEVTYENFVKE 459
>gi|57242493|ref|ZP_00370431.1| trigger factor [Campylobacter upsaliensis RM3195]
gi|57016778|gb|EAL53561.1| trigger factor [Campylobacter upsaliensis RM3195]
Length = 440
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 94/436 (21%), Positives = 185/436 (42%), Gaps = 22/436 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP+S + Y K
Sbjct: 1 MEVKAKQLDSVNATASVKIPSGSINTEVENLAKKTSKTIKMDGFRPGKVPVSAVLKRYKK 60
Query: 61 SILSETIDEIIKEIVPEILSKRD---ERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ ++ + K V L + + P E E+D +
Sbjct: 61 ELRNDAEQNLFKNAVDSALKELKKDLKELVGEPYFEKFERENDAIIAEL----------V 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTV 175
P++++ ++ ++ +KEID + E+ K E +T+ + GD
Sbjct: 111 LSFKPELKLDDYEKCIPEFSTPKISKKEIDEKKNELLKRYGTTEAIKTKRALKEGDYAKF 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ +D + +N +GS E +VG+K+G++K+I FP+++ +L
Sbjct: 171 DFEGFIDGKAFDGGKAENYVLEIGSKQFIPGFEEAMVGMKSGEEKDISVTFPKEYGAANL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----R 290
AGK + E+ +N +L +L E A L +K+K+ +
Sbjct: 231 AGKDAIFKIKLHEIQELKFPELNEELLKKLLPNEEKASEELLDEKLKEQIKNEKLFKLIN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKS-QNVDSIDEEDLQY 349
+++K + D + + FD+P+ ++E E + ++ S +K QN E
Sbjct: 291 EELKAKFADSLIETFEFDLPKGILEQEIDMQFRQAFGTFSEEEKKEIQNDKDKYEAKRNS 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ AK+ V ++ + + IEV+++E+ A+Y + R+ + K+ L+++ K AL
Sbjct: 351 FKDEAKKSVKLTFIIDELAKLRKIEVSDQELVQAVYFEAYRYGFNPKEHLENY-KRQGAL 409
Query: 410 AELRAPIFEDKVIDHI 425
++ + EDK+ + I
Sbjct: 410 PAVKMALIEDKLFNDI 425
>gi|304383402|ref|ZP_07365868.1| trigger factor [Prevotella marshii DSM 16973]
gi|304335570|gb|EFM01834.1| trigger factor [Prevotella marshii DSM 16973]
Length = 450
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 63/455 (13%), Positives = 162/455 (35%), Gaps = 16/455 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + + + I DS ++++D KANI GFRPG+VP+ I+ YG
Sbjct: 1 MKITFENPDKINGLMTITIEEADFKDSVAKQLKDYAKKANIAGFRPGQVPVGMIQRQYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI ++ I+ ++ + + + + + + P N+ +E +
Sbjct: 61 SIKADVINNLLGKALNDYIKENNINMLGNPLPNENQ-----KPVELEKDAPYTFVFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V VD++ ID Q+ A +E + E +
Sbjct: 116 APEFKAELTGRDKVPYYEINVDDEMIDSQVNMFASRAGNYEKVDAYEENDMLKGELQQLD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ +E K ++ + ++ K GD + +LAG +
Sbjct: 176 KNGTPMEGGIKVEGAIMMPHYIKVDKQRKLFAKAKVGDVITFNPRKAYPENDTELAG-LL 234
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++ I + ++ E + E R+ + +
Sbjct: 235 KIDREIAKDVVSDFSYKIAEITRFKKHEVNQELFDQVYGNGTVKDEKQFREMIAGGLKGQ 294
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ F + + ++ + + V + N DE+ ++ + + + +
Sbjct: 295 LQIDSDFRFLQDVRKHMEKKVGKLVYPDALMKRIMLSNNKDKDEKFVEENYEGSIKELTW 354
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF----QKYPNALA 410
++ G + E I++ + +++ A + Q ++ ++ L ++ K +
Sbjct: 355 RLIKGRLVEAQKIKIEDSDVKEAAKEAARMQFAQYGMSNVPEEYLANYASEMLKKQENVD 414
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
L + K+ + V++ + V+ ++ +
Sbjct: 415 GLIDRAIDVKLTTALKAVVKLNTQTVSMEEFNKLA 449
>gi|330996068|ref|ZP_08319962.1| trigger factor [Paraprevotella xylaniphila YIT 11841]
gi|329574065|gb|EGG55643.1| trigger factor [Paraprevotella xylaniphila YIT 11841]
Length = 451
Score = 142 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 57/453 (12%), Positives = 158/453 (34%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L + + D + ++D R KA++ GFRPG+VP+ +K +GK
Sbjct: 1 MNISLENIDKVSAVLTIKMEKADYADRVEKALKDFRRKASMPGFRPGQVPMGLLKKRFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I +E +++++ E + + + + P + + + + +
Sbjct: 61 DITAEEVNKLLGEKLYAYIKENNLNILGEPLPNEDRQQ----DIDFDTMEEFSFAFDLAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + + V +VD+K ID Q+ + +++ ++ + +
Sbjct: 117 APEFKAELSGEDTVDYYDIQVDDKMIDGQVKMYTQRAGSYDHVDSYEAKDMVKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E + ++ E + G K D D ++A +
Sbjct: 177 ENGNTKEGGVQVENAVLLPEYMKNDEQKAVFNGCKVNDVLVFNPNKAYDGHDVEIA-SLL 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++ + ++ E + +K SE R K+K + +
Sbjct: 236 KIKKEDVSAMTSDFSFQVQEITRFKEAELNQELFDQVFEKGTVTSEEAFRNKIKEILAEQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + N + + + + E+ ++ + + +
Sbjct: 296 FVADSDYKFILDVRTYLTNKVGKLEYPDAFLKRFMRVSNADKGEKFVEENYDKSIEELTW 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + + I+V +E++ + Q ++ ++MLD++ K + +
Sbjct: 356 HLIKEQLVKAYGIKVEKEDLIATAKNITKIQFAQYGMINVPEEMLDNYANEMLKKQDQVE 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L E+K+ + V++ ++++ +
Sbjct: 416 SLVNRSVENKLSAALKNVVKLNHKEISVEDFNK 448
>gi|255532969|ref|YP_003093341.1| trigger factor [Pedobacter heparinus DSM 2366]
gi|255345953|gb|ACU05279.1| trigger factor [Pedobacter heparinus DSM 2366]
Length = 448
Score = 142 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 76/468 (16%), Positives = 176/468 (37%), Gaps = 47/468 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ L + + I T+ ++ I++ KAN+ GFR G VP +HIK +YG+
Sbjct: 1 MNITQEKINDLNAVVKIKIAPEDYTEKVDKSIKEQAKKANLPGFRKGMVPAAHIKKMYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SIL E I+ ++ E + + L+ +P ++ D + T + + +
Sbjct: 61 SILVEEINNLLSETLNKHLTDNKVEILGQPLPVMD----DTKEFKWDYTDEFEFDYELGL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P IE++ + TQ + + DE+ + ++ I K+ E ++ +S
Sbjct: 117 APAIEVAITSKDKFTQYVVKADEETLAARIKNIRKSYGKMTNPEVSADDDVLYAELTQLS 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS--------- 231
D + E + + + L+GLK D E++ D +
Sbjct: 177 ADGSVFEGGITATGSIRLDQVTD-KKILKSLIGLKKDDVVELDVQKAFDKNEVVIAKLLN 235
Query: 232 --IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLG----FESESAMRGLCSQKIKQHS 285
+D + + ++K V +N + +L E+ + +++I+
Sbjct: 236 ISEEDAKDLQSKFRVTVKNVNRLEEADLNQEFFDKLFGAGVVTDEAGFKTKITEEIESMF 295
Query: 286 EFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEE 345
+ +K++ I + ++P+ + +K+ E +
Sbjct: 296 KQDADRKLQNDIYTKLIESVKMELPDEFLRKWLKATNEKLTDEELTEGYDDFA------- 348
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRF---PGHEKKM 398
+ + ++ + + NNIE+ E++ + L Q + P E ++
Sbjct: 349 ----------KNLKWTLIENKLIKDNNIEIKYEDVFQTAKQRLDAQFRMYSPSPMPEDQL 398
Query: 399 LDH---FQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ F K + + + KV D+I + +++ +++ +
Sbjct: 399 AQYTATFLKEKDNANRIFDEVKAIKVFDYIQSVATLDQKEIAYNKFTE 446
>gi|299141491|ref|ZP_07034627.1| trigger factor [Prevotella oris C735]
gi|298576827|gb|EFI48697.1| trigger factor [Prevotella oris C735]
Length = 450
Score = 142 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 66/467 (14%), Positives = 161/467 (34%), Gaps = 37/467 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L + + S + ++D R KAN GFRPG VP+ IK +G
Sbjct: 1 MNISFENPDKVNGLLTITVEEADYQASVEKTLKDYRKKANYPGFRPGMVPMGLIKKQFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S + I+++I E + + + + P + + D +E +
Sbjct: 61 SAKMDAINKLIGEQIYKYMQDNKIQMLGEPLPSEKQEAQD-----LEKPAPYTFAFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +I ++ VD+ IDRQ+ A + ++E E+ + +
Sbjct: 116 APEFKIELNGHNKIDHYTITVDDALIDRQVDMFASRSGSYEKAESYEDNDMLKGDLRELD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD----------QKEIERFFPEDH 230
E I+ + + G K GD + E E
Sbjct: 176 EQGNTKEGGVTVEAASIMPNYIKNEAQKALFNGAKLGDIITINPSEAYESEAEIASLLKV 235
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
+ K ++ I ++ V+ +L ++ + + +KI + + +
Sbjct: 236 ERDRVKDFKGNFSYQITDIQRYKKHPVDQELFDQMFGKDTVKDEKVFREKIAEGLKAQLA 295
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
+ + + V + + + + EE ++
Sbjct: 296 VDADYKFILDVRAYCEKKVGKLQFPDALLKRIMLNNNKDKG------------EEFVEKN 343
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF-- 402
+ + + + ++ + N I+V + ++ +A + ++ + + ++++
Sbjct: 344 YEQSVKELTWHLIKEQLVAANQIKVDDADVLNAAKEIARVQFAQYGMNNVPDEYVENYAK 403
Query: 403 --QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
K + L + K+ D + K V++ +++++ D SE
Sbjct: 404 EILKKRENVDGLVDRAVDIKLTDALKKVVKLNEKEISLDDFNKMMSE 450
>gi|209554089|ref|YP_002284747.1| trigger factor [Ureaplasma urealyticum serovar 10 str. ATCC 33699]
gi|226738696|sp|B5ZBF7|TIG_UREU1 RecName: Full=Trigger factor; Short=TF
gi|209541590|gb|ACI59819.1| trigger factor [Ureaplasma urealyticum serovar 10 str. ATCC 33699]
Length = 472
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 100/480 (20%), Positives = 207/480 (43%), Gaps = 23/480 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSK----ANIKGFRPGKVPLSHIKS 56
M+++ K E V+I + NE E + K I GFRPG VP+ K
Sbjct: 1 MKLLNKIKNENAIEFQVLIEKSEWEKKHNEAFEKVAKKTASKLKIPGFRPGNVPVEEAKK 60
Query: 57 LYGK-SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLR 115
+ + T ++++ + + ++DE S T++ DI +L L+
Sbjct: 61 HVNEIEVFETTTNDLVPQALT--FLEQDESFTSDNSETVDTPSIDILDFK---DGELTLK 115
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIA--KNNVAFEVKETESEIGDKV 173
++YD+ P I S++DL +T + E + E++ ++ K+ + + E GD+V
Sbjct: 116 IAYDLYPVATIDSYNDLVLTPIVNEAFDHEVNAEIEHALSSKSQRRVKDENELIEKGDEV 175
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
D+ +DNV + S K+ +GS + ++GLK G+QK +E FP+D+
Sbjct: 176 RFDFKGMIDNVPFQGGSAKDHLLTIGSNQFIPGFEDQMIGLKVGEQKNLEVKFPDDYHAT 235
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVR 290
DLAG+ IKE+ S P +N++ A + ++ +I +
Sbjct: 236 DLAGRSAVFEVLIKEITSVKPQELNDEFAKSFNLPNVNTVQELKDYIHNQIVLAKQERNS 295
Query: 291 QKVKRQILDYI-SNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEE 345
++ +I + + +P+SL++ E + + Q+V ++S Q + + +
Sbjct: 296 ERAWLEIAQQLLAKAKVTPIPQSLIDREVSTLKQQVISQLSQYKIDLKQYLEFSKKSESQ 355
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ AK + +++ I E I V+++E++ + + + G E+ +++ +
Sbjct: 356 FQEDLVKQAKETIALALLVDDIAENQKIVVSDDEVKERIAEMAKLYQGEEEAIIERLSQN 415
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
P+A+ E + KV+++++ + K T L + K ++K +
Sbjct: 416 PDAVKEF---LLHKKVVNYLIDLNKNNQPKDTASTLSKQEDKPKVAKAKTSNTKKVASKK 472
>gi|145219152|ref|YP_001129861.1| trigger factor [Prosthecochloris vibrioformis DSM 265]
gi|145205316|gb|ABP36359.1| trigger factor [Chlorobium phaeovibrioides DSM 265]
Length = 445
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 76/441 (17%), Positives = 169/441 (38%), Gaps = 24/441 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
K ++EL++I + +++ + + + IKGFR G PLS IK L G SI
Sbjct: 22 NIKNISETEQELEIIFSAEEFAPEYDKELTEAKKSIQIKGFRKGHAPLSLIKKLAGPSIE 81
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+ +++ E I+ + + A R I E + L + L Y++ P+
Sbjct: 82 ATIAEKMASEHFGPIIEEAKIKPASRAGIKDFTFEPE----------KLTVTLGYEVHPE 131
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV-AFEVKETESEIGDKVTVDYTVSVD 182
E+ + + + + +D++ + +++ I K + V+E + ++
Sbjct: 132 FELKDYSGYEFKRAVYTIDDEAVQKEINMILKGHGTMLTVEEAAQAADTVIGDVVKLNDA 191
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
ED +N F + + + L G K G +E +
Sbjct: 192 GEEEEDGKTENHHFNLEYLPEDNPFRKALEGQKAGVTLTVETPGRNEGDAPAH------F 245
Query: 243 NFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+I EV + ++L F++ + R ++++H +++ I
Sbjct: 246 KVTIGEVKRMELPELTDELVKEITGERFDNVANFRADVRIQLEEHFNMKSEEELTEAISA 305
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + P+++V + N +++ + +M K+ + E+ A++
Sbjct: 306 KLIEENPVPTPKAMVASFSNMLMENAKRQMGGNFPKAFDT----EQFELAMAPNAEKHAQ 361
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
I+ IGE NN+E+ EEE+++ ++ + + L + I ++
Sbjct: 362 WLIISQKIGEMNNLEIGEEEIKAFAEKEAAKNTAMNAEELIKTYMSAEFRDYITDSITKE 421
Query: 420 KVIDHILKSVQIVDRKVTFDQ 440
K+ + I + V I D +
Sbjct: 422 KIYEIIREKVTITDEPTPVPE 442
>gi|281425293|ref|ZP_06256206.1| hypothetical protein HMPREF0971_02265 [Prevotella oris F0302]
gi|281400586|gb|EFB31417.1| trigger factor [Prevotella oris F0302]
Length = 450
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 66/467 (14%), Positives = 160/467 (34%), Gaps = 37/467 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L + + S + ++D R KAN GFRPG VP+ IK +G
Sbjct: 1 MNISFENPDKVNGLLTITVEEADYQASVEKTLKDYRKKANYPGFRPGMVPMGLIKKQFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S + I+++I E + + + + P + + D +E +
Sbjct: 61 SAKMDAINKLIGEQIYKYMQDNKIQMLGEPLPSEKQEAQD-----LEKPAPYTFAFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +I ++ VD+ IDRQ+ A + ++E E+ + +
Sbjct: 116 APEFKIELNGHNKIDHYTITVDDALIDRQVDMFASRSGSYEKAESYEDNDMLKGDLRELD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD----------QKEIERFFPEDH 230
E I+ + + G K GD + E E
Sbjct: 176 EQGNTKEGGVTVEAATIMPNYIKNEAQKALFNGAKLGDIITINPSEAYESEAEIASLLKV 235
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
+ K ++ I ++ V+ +L ++ + +KI + + +
Sbjct: 236 ERDRVKDFKGNFSYQITDIQRYKKHPVDQELFDQMFGKDTVKDEKAFREKIAEGLKAQLA 295
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
+ + + V + + + + EE ++
Sbjct: 296 VDADYKFILDVRAYCEKKVGKLQFPDALLKRIMLNNNKDKG------------EEFVEKN 343
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF-- 402
+ + + + ++ + N I+V + ++ +A + ++ + + ++++
Sbjct: 344 YEQSVKELTWHLIKEQLVAANQIKVDDADVLNAAKETARVQFAQYGMNNVPDEYVENYAK 403
Query: 403 --QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
K + L + K+ D + K V++ +++++ D SE
Sbjct: 404 EILKKRENVDGLVDRAVDIKLTDALKKVVKLNEKEISLDDFNKMMSE 450
>gi|121612935|ref|YP_999912.1| trigger factor [Campylobacter jejuni subsp. jejuni 81-176]
gi|167004872|ref|ZP_02270630.1| trigger factor [Campylobacter jejuni subsp. jejuni 81-176]
gi|166229032|sp|A1VXS1|TIG_CAMJJ RecName: Full=Trigger factor; Short=TF
gi|87250321|gb|EAQ73279.1| trigger factor [Campylobacter jejuni subsp. jejuni 81-176]
Length = 444
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 88/433 (20%), Positives = 182/433 (42%), Gaps = 16/433 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP+S + Y +
Sbjct: 1 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYER 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + + K V L + + ++ L
Sbjct: 61 ELTQDAEQNLFKSAVNSALQELK-------KESKELVGEPYFEKFDRKDGEIIAELILSF 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
P+I++ ++ L +V++KEID + E+ K E +T+ + GD D+
Sbjct: 114 KPEIKLDGYEKLIPEYQTPKVNKKEIDEKKDELLKRFSTPEAIKTKRALKEGDFAKFDFE 173
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VD+ E +N +GS + +VG+K G++K+I+ FP+++ LA K
Sbjct: 174 GFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLADK 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----RQKV 293
+ E+ +++++ +L E A + +K+K+ + ++
Sbjct: 234 DAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDEL 293
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQYYHM 352
K + D + KY FD+P+ +VE E + ++ S + + +E +
Sbjct: 294 KGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKE 353
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A++ V ++ + + IEV ++E+ A+Y + R+ + K+ L++++K AL +
Sbjct: 354 EAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKK-QGALPAV 412
Query: 413 RAPIFEDKVIDHI 425
+ + E+K+ + I
Sbjct: 413 KMALIEEKLFNDI 425
>gi|255323212|ref|ZP_05364347.1| trigger factor [Campylobacter showae RM3277]
gi|255299735|gb|EET79017.1| trigger factor [Campylobacter showae RM3277]
Length = 438
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 89/447 (19%), Positives = 181/447 (40%), Gaps = 23/447 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ K + + L IPS + + I GFR GKVP++ + Y K
Sbjct: 1 MQIKTKAIDAVNASLSAKIPSADVKSKLENAAKKAAKNMKIDGFRAGKVPVNVVLKRYEK 60
Query: 61 SILSETIDEIIKEIVPEILSKRD---ERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ ++ + +K+++ L + + E P +T + + IE
Sbjct: 61 ELTADAEQDALKDVIDAGLKELNRKFEEVIGEPIVTKFDRGENEIDTEIE---------- 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVD 176
P I I +++L + V +KEID + EI K E E + E GD D
Sbjct: 111 LSFKPVINIDGYEELIESVSTPRVTKKEIDERKNEILKMMAPLEKIEKAALEKGDFAKFD 170
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ VD E +N +GS + ++GLK G++++++ FP ++ LA
Sbjct: 171 FEGFVDGEAFEGGKAENYLLEIGSGQFIPGFEDGMIGLKVGEERDVKVKFPAEYGAAHLA 230
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH------SEFLVR 290
GK + E+ ++ ++ E + ++ + V
Sbjct: 231 GKDATFKVKLHEIQGKKVPEEIDEETLKRIMPGEEKVSVELFEERLKEQIKAEKHAKNVN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQY 349
+++K + D I K+ FDVP+++VE E + + + K + + +
Sbjct: 291 EELKPKFADAIVAKFNFDVPKNIVEQEMDMQFRGAWSSFTPEQMAKFREDKDALTKQRET 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
Y A + V ++ + + +I+V+++E+ A+Y + R K+ L+++ K L
Sbjct: 351 YRDDAVKSVKLTFIIDELARRRDIKVSDQELIQAVYFEAYRSGVDPKQHLENY-KNQGIL 409
Query: 410 AELRAPIFEDKVIDHILK-SVQIVDRK 435
++ + E+K+ + + ++K
Sbjct: 410 PAIKMSMIEEKLFNEMFALKSDKKEKK 436
>gi|186701695|ref|ZP_02971389.1| trigger factor [Ureaplasma parvum serovar 6 str. ATCC 27818]
gi|186700953|gb|EDU19235.1| trigger factor [Ureaplasma parvum serovar 6 str. ATCC 27818]
Length = 449
Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 96/445 (21%), Positives = 195/445 (43%), Gaps = 23/445 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSK----ANIKGFRPGKVPLSHIKS 56
M+++ K E ++I + E E I K I GFRPGKVP+ K
Sbjct: 1 MKLLNKIKNENTIEFQILIEKSEWEKKHKESFEKIAKKTASKLKIPGFRPGKVPVEEAKK 60
Query: 57 LYGK-SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLR 115
+ + T +++I +++ ++DE S T++ DI +L L+
Sbjct: 61 HVNEIEVFETTTNDLIPQVLT--FLEQDESFINDDSETVDTPSVDILDFK---DGELSLK 115
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKN--NVAFEVKETESEIGDKV 173
+ YD+ P I S++DL +T + E E E++ ++ + + E GD+V
Sbjct: 116 VVYDLYPVATIESYNDLILTPIVNEAFEHEVNAEIEHALNSKSQRRVKDDNEFIEKGDEV 175
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
D+ +D+V E S K+ +GS + ++GLK ++K I FP+D+
Sbjct: 176 RFDFKGVIDSVPFEGGSAKDHLLTIGSNQFIPGFEDQMIGLKKDERKNINVKFPDDYHAT 235
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVR 290
DLAGK IKE+ + P +N++ A + ++ +I +
Sbjct: 236 DLAGKAAVFEVFIKEITNVKPQELNDEFAKSFNLPNVNTVQELKDYIHNQIVLAKQEKNS 295
Query: 291 QKVKRQILDYI-SNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEE 345
++ +I + + +P+SL++ E + + Q+V ++S Q + + +
Sbjct: 296 ERAWLEIAQQLLAKAKITPIPQSLIDREVSTLRQQVLSQLSQYKIELKQYLEFSKKSEAQ 355
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ AK + +++ I + NI V++EE++ + + + G E+ +++ K
Sbjct: 356 FQEDLIRQAKETITLALLVDDIAKTQNIVVSDEEVKERVAEMAKLYQGEEQAVIEQLSKN 415
Query: 406 PNALAELRAPIFEDKVIDHILKSVQ 430
P+A+ E + KV+++++ +
Sbjct: 416 PDAVKEF---LLHKKVVNYLIDLNK 437
>gi|312149090|gb|ADQ29161.1| trigger factor [Borrelia burgdorferi N40]
Length = 454
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 72/449 (16%), Positives = 186/449 (41%), Gaps = 16/449 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + N + + +N ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVVIRVSKNVIQEKYNSLLQDYSSRLKIQGFRIGKVPINVIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I E + + + T+ E + + D + +Y+ P+
Sbjct: 67 TVLEEVINNSFKEFFKEESKMPLSYATPTVKE-----KNLKLNLDEDFEFTFTYETYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY----TVS 180
+I SFD + + +I EV + D + E E + + ++ +
Sbjct: 122 KIPSFDKIDIKVEIPEVFIDDSDIDDEIKNLQIENSIIIEDEEGVVKEDSIVKVDFVELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + ++ F VG ++ + + + ++G++ +++ IE+ + D+ ++LAG
Sbjct: 182 DLSNEIVSTKRQGFVFTVGKSETYYDFDKDVIGMRINEERVIEKSYIADYKFEELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +++++ A + + ++ + E +
Sbjct: 242 KLKIKIKSIKKRDLPLIDDEFAQDISDKYNTLDDLKNFIRSSLLNIVEEKKETLKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN---VDSIDEEDLQYYHMLAK 355
IS K D+P S++E E + + + + S
Sbjct: 302 STISEKLEIDIPHSMIEAEIEIAFKDAKRRNKNNMSLEEFKSIFYSSGYIGGDNLKDEIL 361
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + +++ + + + I+VTE +++ + +Q +++ + + N ++ L+
Sbjct: 362 GNLKSKLIMQKMVDLDPIKVTESDVEDEMARQSKNLGVSYEEIKKFY-EDQNLISYLKDD 420
Query: 416 IFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
I ++ IL++++ + +K+ F +
Sbjct: 421 IKRERAKKKILENLKEVKGKKLNFRDFVN 449
>gi|288924565|ref|ZP_06418502.1| trigger factor [Prevotella buccae D17]
gi|315607427|ref|ZP_07882423.1| trigger factor [Prevotella buccae ATCC 33574]
gi|288338352|gb|EFC76701.1| trigger factor [Prevotella buccae D17]
gi|315250859|gb|EFU30852.1| trigger factor [Prevotella buccae ATCC 33574]
Length = 451
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 59/468 (12%), Positives = 164/468 (35%), Gaps = 38/468 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + + + + ++ + ++D R KAN+ GFRPG+ P+ IK YG
Sbjct: 1 MKISFENPDKVNGLMTIAVEEADYKENVEKTLKDYRKKANMPGFRPGQAPMGLIKRQYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + I++++ + + + + + + P + + D +E + +
Sbjct: 61 AARMDEINKLVGKEIYKYVQDNNIQMLGEPLPSEKQEPQD-----LENGTEFTFYFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++S +V VD+K +D+Q+ A ++E T + +
Sbjct: 116 APEMKVSLTGRDKVDYYNIIVDDKLVDQQVDMFASRAGSYEKARTYKDNDMLKGDLRELD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD-----------QKEIERFFPED 229
E ++ + + ++ G K GD + E
Sbjct: 176 EAGNTKEGGITVEAAVLMPTYIKVDDQKKLFDGAKLGDIITFNPRKAYPDNDTEVSSLLK 235
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+ +F I E+ V+ +L + E +KI + + +
Sbjct: 236 IERDTVKDMTSDFSFQITEIQRFAKHAVDQELFDQTFGEGVVKDEKEFREKIAEGLKRQL 295
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ + + V + + N E+ ++
Sbjct: 296 ATDSDFKFIQDVRAHCEKKVG------------ELTYPDALLKRIMLSNNKDKGEDYVEK 343
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGH--EKKMLDHF- 402
+ + + + ++ + + NI++ + ++ + A Q ++ + + ++++
Sbjct: 344 NYAQSIKELTWHLIKEQLVKAQNIKIEDADVKEAAKEAARAQFAQYGMNNVPEDYIENYA 403
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
K ++ L + K+ + V++ +++V+ + SE
Sbjct: 404 NEVLKKGDSNDALVDRAIDRKLTAVLKTVVKLNEKEVSLEDFNKLMSE 451
>gi|34540548|ref|NP_905027.1| trigger factor [Porphyromonas gingivalis W83]
gi|34396861|gb|AAQ65926.1| trigger factor, putative [Porphyromonas gingivalis W83]
Length = 458
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 60/460 (13%), Positives = 154/460 (33%), Gaps = 15/460 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K ++ + V I + + + R +AN+ GFR G VP+ IK +YGK
Sbjct: 1 MNVSIKNTDAVNAIATVAIEKADYANEVEKALRTYRQRANVPGFRKGMVPMGMIKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E I+ ++ + +++ P + T D + +
Sbjct: 61 GVKAEEINRVVGRELYRYIAENKLNVLGEPMPNEELQ----KEYDFDTTDDFEFVFDLAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +++ ++V + E+ IDRQ+ + + + + +
Sbjct: 117 SPVVDVVVDKSIRVPYYTIQPTEEMIDRQIESMRSSYGHSVEADEVTANDVVKGRLCELE 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + E + VG +++ +L+
Sbjct: 177 DGQPKEGGICVEEAMLLPAYMKDEEEKNK-FVGAAKNSVVVFNPSKAYNNNEYELSSLLK 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+I E +++ +E + ++ +E +R KV + +
Sbjct: 236 VDKSAIGEHTGDFSFEISSISRHEKAELNEEFFKQAFGEETDIKNEADLRVKVTEGVREQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + L + + + + +E+L+ + + +
Sbjct: 296 FTAESDYKFLIDLRRELEAQVGELQFPDALLKRWLKLSHTEWSDEELEKQYPAMIKDLTF 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALY----QQLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + +KN+I VT +E+++ Q ++ + L+ + + +A
Sbjct: 356 HVIKEDLVKKNDIVVTPQEVRNFAIIVAKNQFAQYGMSAVPQDALERYANTMMEKEDARR 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
+ E+K+ + + + I + V+ D+ +E
Sbjct: 416 NFFDRVTENKLAAALKEKLDIDAKTVSPDEFNKLMTEQPA 455
>gi|281421761|ref|ZP_06252760.1| trigger factor [Prevotella copri DSM 18205]
gi|281404256|gb|EFB34936.1| trigger factor [Prevotella copri DSM 18205]
Length = 452
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 59/453 (13%), Positives = 169/453 (37%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + L +++ + + ++D R KAN+ GFRPG+ P+ IK +G
Sbjct: 1 MKISFENPDKINGLLTLVVEEEDYKNDVEKTLKDYRKKANVPGFRPGQAPMGMIKRQFGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E I++++ + + + + + + P + + +D +E +
Sbjct: 61 SVKMEAINKLVGQQIYKYVQDNNIQMLGEPLPSEKQEPAD-----LENGTSFTFMFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +++ +V VD+K +D+Q+ A+ ++E E E +
Sbjct: 116 APEFKVTLNGRDKVDYYNITVDDKILDQQIDMYAQRAGSYEKAEKYEENDLLKGDLRELD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E ++ S E + K GD + +++
Sbjct: 176 ENGNTKEGGITVEGAILMPSYIKVDEQKNLFNDAKLGDVITFNPKKAYPENDTEVSSLLK 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++K++ S + + +E + + + E R K+ +
Sbjct: 236 IEREAVKDLESEFSFQITEIQRFKKHEINEELFKQVLGEDTDVKDEAAFRAKIAEGLQAQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ N + + E+ + + + N EE ++ + + + +
Sbjct: 296 LVNDSDYKFILDVREHCEKKVGELQFPDALLKRIMLANNKDKGEEFVEKNYAESIKELTW 355
Query: 361 GIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + + +I+V + ++ + A Q ++ + ++ ++++ K +A
Sbjct: 356 HLIKEQLIKAQDIKVDDNDLMETAKEAARAQFAQYGMNNIPEEYIENYAKEILKKGDATD 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L + K+ + +V++ +++++ +
Sbjct: 416 ALVDRSIDRKLAAALKTAVKLNEKEISVEDFNK 448
>gi|237755492|ref|ZP_04584114.1| trigger factor [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692356|gb|EEP61342.1| trigger factor [Sulfurihydrogenibium yellowstonense SS-5]
Length = 437
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 107/453 (23%), Positives = 213/453 (47%), Gaps = 20/453 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V+ + +E L R L + ++ + E I++I A +KGFR G VP + IK+ Y
Sbjct: 1 MNVVVE-AENLLRTLTIEDEGQKVKELAEEVIKEISKVAEVKGFRKGHVPKAVIKAKYKD 59
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I E I + +PEIL K + + E +E L +++S+++
Sbjct: 60 AIKEEVAKAYINKYLPEILEKENLKPV--------TPEILFGDVKLENDEKLSMKVSFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ ++ ++V EV +++++ + I +N+V +E + E E GDKV V Y +
Sbjct: 112 APEFELKPYEGIEVEVVKLEVKDEDVENAIKNILENHVRYEDADKEIEDGDKVKVKYHIV 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E+ + I+GS L E + + G K GD+ E+E + +++ K
Sbjct: 172 SDKGEEEEDEFET---IIGSGTLRKEIEDAIKGKKVGDKVELENAPLYNEKGEEIG--KA 226
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ I EV + N++ LG E+ + + I+ + L +Q+++++ILD
Sbjct: 227 KIELEILEVKRKVVPEFNDEFVKSLGLGENVEEAKNKIRENIENQLKALRKQEIEQKILD 286
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
++ +Y F VP SL+ E + + Q+ F++ S K I E + A V
Sbjct: 287 KLAQEYDFPVPGSLLALEIDNLTQRYTFQLESYGIKPN--KEIIEAAEGNLTITAINNVR 344
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
++L I EK I V++EE+ + + + + M ++ + L +++ I
Sbjct: 345 VMLILSKIAEKEGITVSDEELDAQISKLAQSYNVSFADMREYLIQ-KGMLEGIKSDIARQ 403
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
K +D +++ I ++++ ++L + + E+
Sbjct: 404 KALDILVEKANI--KEISKEELEAREKQENKEE 434
>gi|325300150|ref|YP_004260067.1| trigger factor [Bacteroides salanitronis DSM 18170]
gi|324319703|gb|ADY37594.1| trigger factor [Bacteroides salanitronis DSM 18170]
Length = 448
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 64/464 (13%), Positives = 162/464 (34%), Gaps = 40/464 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L V I + + ++ +R + N+ GFRPG VP+S +K YG
Sbjct: 1 MNISLQNVDKVSAVLTVQIEKADYQEKVEKALKTLRKRVNMPGFRPGMVPMSLVKKHYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L E +D++++E V E + + P ++ + + +
Sbjct: 61 SVLVEEVDKLMQEKVNEYIRENKVDMLGAP-------LPKESNADFVNDENFEFAFDIAL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + D + V ++ +D+Q+ + +E E + + +
Sbjct: 114 APEFTVDLSADDTIDYYDINVTDEMVDQQVKMYTQRTAKYEKVEDYQDNDLLKGLLAELD 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG-----------DQKEIERFFPED 229
+ E + ++ S + I G K D E E
Sbjct: 174 ENGNTKEGGLQVEGAVMMPSYMKNDDQKAIFNGAKVNTVLTFNPSVAFDNNEAELASLLK 233
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+++A +F I+E+ +P +N +L ++ E ++ +IK+
Sbjct: 234 IKKEEVASYTGNFSFQIEEITRMIPGDLNQELFDQVLGEGKAHNEEEFRAQIKETIAKQY 293
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + + + + + + +N EE +
Sbjct: 294 EADSDYKFLIDVRSYVSGKIGK------------LQFADDLMKRIMLENNKDKGEEFVSE 341
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF- 402
++ + + ++ + + I+V + ++ + Q ++ ++L+++
Sbjct: 342 HYEKSLEELTWHLIKEKLVAAHGIKVEQADITEMAKEATRAQFAQYGMINVPDELLENYS 401
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K ++ L E K+ + + V + + V+ ++
Sbjct: 402 KEMLKKRESVEALVNRAVEAKLSEALKAQVTLNHKAVSAEEFNK 445
>gi|319900085|ref|YP_004159813.1| trigger factor [Bacteroides helcogenes P 36-108]
gi|319415116|gb|ADV42227.1| trigger factor [Bacteroides helcogenes P 36-108]
Length = 451
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 59/453 (13%), Positives = 160/453 (35%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + + ++ +++ R KA + GFR G VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQEKIDKSLKNFRQKAQVPGFRKGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L+E +++++ E V + + P ++ + + + +
Sbjct: 61 SVLAEEVNKLLSESVYKYIQDNKVNILGEPLPNEDKQ----KEIDFDTMEEFEFLFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV + I+ Q+ + + ++ + + + +
Sbjct: 117 APEFKAEVCATDKVDYYTIEVTDDMIENQIKSYTQRSGKYDKVDVYEDNDMLKGLLVELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E + ++ S ++ K D D + +LA +
Sbjct: 177 EEGNTKEGGVQVEGAVMMPSYMKNNDQKATFKDAKVNDVLVFNPNTAWDGNAAELA-SLL 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++ ++ + + + K +E R KVK I
Sbjct: 236 KIDKEATTEIKSNFSFQIEEITRFVPGDLNQEIFDQVFGKDVVKNEEEFRAKVKESIAAQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + + + N DE ++ + + +
Sbjct: 296 FVADSDYKFLIDMRKALMEKVGNLEFPDALLKRIMRLNNPEKDEAFVEENYDKSIEELTW 355
Query: 361 GIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + + N+I+V +E++ + A Q ++ +++L+++ K ++
Sbjct: 356 HLIKEQLVKANDIKVEQEDITNMAKDATRAQFAQYGMLSVPEEILENYVKEMLKKKESIE 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L + E K+ + V + ++ ++ ++
Sbjct: 416 GLVNRVVESKLAAVLKAQVTLENKNISLEEFNK 448
>gi|222873042|gb|EEF10173.1| predicted protein [Populus trichocarpa]
Length = 325
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 73/329 (22%), Positives = 153/329 (46%), Gaps = 8/329 (2%)
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE--IGDKVTVDYT 178
+P+++I +V + EVD+ ID+ + + K F + GD+VTVD+
Sbjct: 1 MPEVKIGDLTSAEVEKLTAEVDDAAIDKTVDILRKQRRTFAQRAQADVAVDGDRVTVDFE 60
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D ++ QF+VG + E + + G+K G+ K FP D+ KD+AGK
Sbjct: 61 GKIDGETFSGGKAEDFQFLVGEGQMLKEFEDAVRGMKAGESKTFPLAFPADYHGKDVAGK 120
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++K++ + V+ A LG + +R + +++ +F V+ + K+
Sbjct: 121 TADFLVTVKKIEAANLPEVDEAFAKALGVAEGTVEGLRADIKKNLEREVKFRVQGRNKQA 180
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
++D + +K ++P++ V+ E +L+ R E+ K E + A+R
Sbjct: 181 VMDALVSKAELELPKASVQAEVARLLEGARAELQQRGIKDAEKA---EIPEDVFLPQAER 237
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
RV G+V+ + N + T +++++ + + + + + + LAE+ A +
Sbjct: 238 RVRLGLVVAELVRANELHATPDQIKAHVEELAASY-EKPEDVARWYFGDRQRLAEVEAVV 296
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
E+ V + +L ++ D+ V+FD+L +
Sbjct: 297 IENNVTEFVLGKAKVSDKAVSFDELMGQA 325
>gi|223889052|ref|ZP_03623642.1| trigger factor [Borrelia burgdorferi 64b]
gi|223885478|gb|EEF56578.1| trigger factor [Borrelia burgdorferi 64b]
Length = 454
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 73/449 (16%), Positives = 188/449 (41%), Gaps = 16/449 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + N + + +N ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVVIRVSKNVIQEKYNSLLQDYSSRLKIQGFRIGKVPINVIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I E + + + T+ E + + D + +Y+ P+
Sbjct: 67 TVLEEVINNSFKEFFKEESKMPLSYATPTVKE-----KNLKLNLDEDFEFTFTYETYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY----TVS 180
+I SFD++ + +I EV + D + E E + + ++ +
Sbjct: 122 KIPSFDEIDIKVEIPEVFIDDSDIDDEIKNLQIENSIIIEDEEGVVKEDSIVKVDFVELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + ++ F VG ++ + + + ++G++ +++ IE+ + D+ K+LAG
Sbjct: 182 DLSNEIVSTKRQGFVFTVGKSETYYDFDKDVIGMRINEERVIEKSYIADYKFKELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +++++ A + + ++ + E +
Sbjct: 242 KLKIKIKSIKKRDLPLIDDEFAQDISDKYNTLDDLKNFIRSSLLNIVEEKKETLKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN---VDSIDEEDLQYYHMLAK 355
IS K D+P S++E E + + + + + S
Sbjct: 302 STISEKLEIDIPHSMIEAEIEIAFKDAKRQNKNNMSLEEFKSIFYSSGYIGGDNLKDEIL 361
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + +++ + + + I+VTE +++ + +Q +++ + + N ++ L+
Sbjct: 362 GNLKSKLIMQKMVDLDPIKVTESDVEDEMARQSKNLGVSYEEIKKFY-EDQNLISYLKDD 420
Query: 416 IFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
I ++ IL++++ + +K+ F +
Sbjct: 421 IKRERAKKKILENLKEVKGKKLNFRDFVN 449
>gi|225549507|ref|ZP_03770473.1| trigger factor [Borrelia burgdorferi 118a]
gi|225369784|gb|EEG99231.1| trigger factor [Borrelia burgdorferi 118a]
Length = 454
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 71/449 (15%), Positives = 189/449 (42%), Gaps = 16/449 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + + + + +N ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVVIRVSKSVIQEKYNSLLQDYSSRLKIQGFRIGKVPINVIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I + E + + + T+ E + + D + +Y+ P+
Sbjct: 67 TVLEEVINNSLKEFFKEESKIPLSYATPTVKE-----KNLKLNLDEDFEFTFTYETYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY----TVS 180
+I SFD++ + +I EV + D + E E + + ++ +
Sbjct: 122 KIPSFDEIDIKVEIPEVFIDDSDIDDEIKNLQIENSIIIEDEEGVVKEDSIVKVDFVELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + ++ F VG ++ + + + ++G++ +++ IE+ + D+ ++LAG
Sbjct: 182 DLSNEIVSTKRQGFVFTVGKSETYYDFDKDVIGMRINEERVIEKSYIADYKFEELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +++++ A + + ++ + E +
Sbjct: 242 KLKIKIKSIKKRDLPLIDDEFAQDISDKYNTLDDLKNFIRSSLLNIVEEKKETLKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN---VDSIDEEDLQYYHMLAK 355
IS K D+P S++E E + + + + + S
Sbjct: 302 STISEKLEIDIPHSMIEAEIEIAFKDAKRQNKNNMSLEEFKSIFYSSGYIGGDNLKDEIL 361
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + +++ + + + I+VTE +++ + +Q +++ + + N ++ L+
Sbjct: 362 GNLKSKLIMQKMVDLDPIKVTESDVEDEMARQSKNLGVSYEEIKKFY-EDQNLISYLKDD 420
Query: 416 IFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
I ++ IL++++ + +K+ F +
Sbjct: 421 IKRERAKKKILENLKEVKGKKLNFRDFVN 449
>gi|216264216|ref|ZP_03436208.1| trigger factor [Borrelia burgdorferi 156a]
gi|215980689|gb|EEC21496.1| trigger factor [Borrelia burgdorferi 156a]
Length = 454
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 72/449 (16%), Positives = 189/449 (42%), Gaps = 16/449 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + N + + +N ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVVIRVSKNVIQEKYNSLLQDYSSRLKIQGFRIGKVPINVIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I E + + + T+ E + + D + +Y+ P+
Sbjct: 67 TVLEEVINNSFKEFFKEESKMPLSYATPTVKE-----KNLKLNLDEDFEFTFTYETYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY----TVS 180
+I SFD++ + +I EV + D + E E + + ++ +
Sbjct: 122 KIPSFDEIDIKVEIPEVFIDDSDIDDEIKNLQIENSIIIEDEEGVVKEDSIVKVDFVELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + ++ F VG ++ + + + ++G++ +++ IE+ + D+ ++LAG
Sbjct: 182 DLSNEIVSTKRQGFVFTVGKSETYYDFDKDVIGMRINEERVIEKSYIADYKFEELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + + +++++ A + + ++ + E +
Sbjct: 242 KLKIKIKSIKTRDLPLIDDEFAQDISDKYNTLDDLKNFIRSSLLNIVEEKKETLKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN---VDSIDEEDLQYYHMLAK 355
IS K D+P S++E E + + + + + S
Sbjct: 302 STISEKLEIDIPHSMIEAEIEIAFKDAKRQNKNNMSLEEFKSIFYSSGYIGGDNLKDEIL 361
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + +++ + + + I+VTE +++ + +Q +++ + + N ++ L+
Sbjct: 362 GNLKSKLIMQKMVDLDPIKVTESDVEDEMARQSKNLGVSYEEIKKFY-EDQNLISYLKDD 420
Query: 416 IFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
I ++ IL++++ + +K+ F +
Sbjct: 421 IKRERAKKKILENLKEVKGKKLNFRDFVN 449
>gi|13357907|ref|NP_078181.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|170762172|ref|YP_001752430.1| trigger factor [Ureaplasma parvum serovar 3 str. ATCC 27815]
gi|171920188|ref|ZP_02691407.2| trigger factor [Ureaplasma parvum serovar 1 str. ATCC 27813]
gi|183508776|ref|ZP_02958243.1| trigger factor [Ureaplasma parvum serovar 14 str. ATCC 33697]
gi|12230733|sp|Q9PQE4|TIG_UREPA RecName: Full=Trigger factor; Short=TF
gi|189035962|sp|B1AIY6|TIG_UREP2 RecName: Full=Trigger factor; Short=TF
gi|11356854|pir||H82903 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
UU347 [imported] - Ureaplasma urealyticum
gi|6899326|gb|AAF30756.1|AE002131_10 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|168827749|gb|ACA33011.1| trigger factor [Ureaplasma parvum serovar 3 str. ATCC 27815]
gi|171902565|gb|EDT48854.1| trigger factor [Ureaplasma parvum serovar 1 str. ATCC 27813]
gi|182675718|gb|EDT87623.1| trigger factor [Ureaplasma parvum serovar 14 str. ATCC 33697]
Length = 449
Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats.
Identities = 97/445 (21%), Positives = 195/445 (43%), Gaps = 23/445 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSK----ANIKGFRPGKVPLSHIKS 56
M+++ K E ++I + E E I K I GFRPGKVP+ K
Sbjct: 1 MKLLNKIKNENAIEFQILIEKSEWEKKHKESFEKIAKKTASKLKIPGFRPGKVPVEEAKK 60
Query: 57 LYGK-SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLR 115
+ + T +++I +++ ++DE S T++ DI +L L+
Sbjct: 61 HVNEIEVFETTTNDLIPQVLT--FLEQDESFINDDSETVDTPSVDILDFK---DGELSLK 115
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKN--NVAFEVKETESEIGDKV 173
+ YD+ P I S++DL +T + E E E++ ++ + + E GD+V
Sbjct: 116 VVYDLYPVATIESYNDLILTPIVNEAFEHEVNAEIEHALNSKSQRRVKDDNEFIEKGDEV 175
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
D+ +D+V E S K+ +GS + ++GLK ++K I FP+D+
Sbjct: 176 RFDFKGMIDSVPFEGGSAKDHLLTIGSNQFIPGFEDQMIGLKKDERKNINVKFPDDYHAT 235
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVR 290
DLAGK IKE+ + P +N++ A + ++ +I +
Sbjct: 236 DLAGKAAVFEVFIKEITNVKPQELNDEFAKSFNLPNVNTVQELKDYIHNQIVLAKQEKNS 295
Query: 291 QKVKRQILDYI-SNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEE 345
++ +I + + +P+SL++ E + + Q+V ++S Q + + +
Sbjct: 296 ERAWLEIAQQLLAKAKITPIPQSLIDREVSTLRQQVLSQLSQYKIELKQYLEFSKKSEAQ 355
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ AK + +++ I E NI V++EE++ + + + G E+ +++ K
Sbjct: 356 FQEDLIRQAKETITLALLVDDIAETQNIVVSDEEVKERVAEMAKLYQGEEQAVIEQLSKN 415
Query: 406 PNALAELRAPIFEDKVIDHILKSVQ 430
P+A+ E + KV+++++ +
Sbjct: 416 PDAVKEF---LLHKKVVNYLIDLNK 437
>gi|149369718|ref|ZP_01889570.1| peptidyl-prolyl cis-trans isomerase, trigger factor [unidentified
eubacterium SCB49]
gi|149357145|gb|EDM45700.1| peptidyl-prolyl cis-trans isomerase, trigger factor [unidentified
eubacterium SCB49]
Length = 439
Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats.
Identities = 68/455 (14%), Positives = 163/455 (35%), Gaps = 28/455 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +K + L L V + D + + R A + GFR G +P+ +K YGK
Sbjct: 1 MNITKKEIDSLNAVLTVEVKKEDYADKVQSVLNNYRKTATVPGFRKGHIPMGMVKKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L E +++I++E + + L++ P + + D +
Sbjct: 61 AVLLEEVNKILQENLHKYLTEEKLDILGNP-------LPKNDTEIDWDGEDFSFEFDLGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ VTQ DEK +D Q+ I K KE + + T +
Sbjct: 114 SPEFT-VDVKKKAVTQYKVVADEKMLDNQVLTIRKQYGKLTNKEVVEKGD-----EITGT 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N K ++ + T+ L+G K GD ++ + + + +
Sbjct: 168 FKNEEAAIDKKTTLELDLVKG---KTQTKALLGAKAGDVITLKTKGL--FAEEVELQRHL 222
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++ + ++ R E + + SE ++ K+K
Sbjct: 223 GVDPVAAKDLKVEVEFTVEEVNSREMAELNQELFDKLFGEGNVTSEKELKAKIKEDAEGQ 282
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + +V++ + E + + EE+ + + +++ +
Sbjct: 283 FMQQSDQKLLNDVVDSLIENTKFDLPGEFLQKWIQVSGEKVMTEEEAKAEYERSEKGLRY 342
Query: 361 GIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPG------HEKKMLDHFQKYPNALA 410
++ G + +NN++VT +E++ + QQ+ +F + +
Sbjct: 343 QLIEGKLRAENNLQVTFDELKEYSKGMIKQQMAQFGQLDPSEEELDSIAARIMGNEEEVK 402
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
+ + +K++ + ++ ++ ++V++D +
Sbjct: 403 RMSEQLATNKLLGYFKENAKLKTKEVSYDTFIKEA 437
>gi|15594955|ref|NP_212744.1| trigger factor [Borrelia burgdorferi B31]
gi|12230720|sp|O51555|TIG_BORBU RecName: Full=Trigger factor; Short=TF
gi|2688533|gb|AAC66965.1| trigger factor (tig) [Borrelia burgdorferi B31]
Length = 454
Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats.
Identities = 72/449 (16%), Positives = 188/449 (41%), Gaps = 16/449 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + N + + +N ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVVIRVSKNVIQEKYNSLLQDYSSRLKIQGFRIGKVPINVIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I E + + + T+ E + + D + +Y+ P+
Sbjct: 67 TVLEEVINNSFKEFFKEESKIPLSYATPTVKE-----KNLKLNLDKDFEFTFTYETYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY----TVS 180
+I SFD++ + +I EV + D + E E + + ++ +
Sbjct: 122 KIPSFDEIDIKVEIPEVFIDDSDIDDEIKNLQIENSIIIEDEEGVVKEDSIVKVDFVELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + ++ F VG ++ + + + ++G++ +++ IE+ + D+ ++LAG
Sbjct: 182 DLSNEIVSTKRQGFVFTVGKSETYYDFDKDVIGMRINEERVIEKSYIADYKFEELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +++++ A + + ++ + E +
Sbjct: 242 KLKIKIKSIKKRDLPLIDDEFAQDISDKYNTLDDLKNFIRSSLLNIVEEKKETLKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN---VDSIDEEDLQYYHMLAK 355
IS K D+P S++E E + + + + + S
Sbjct: 302 STISEKLEIDIPHSMIEAEIEIAFKDAKRQNKNNMSLEEFKSIFYSSGYIGGDNLKDEIL 361
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + +++ + + + I+VTE +++ + +Q +++ + + N ++ L+
Sbjct: 362 GNLKSKLIMQKMVDLDPIKVTESDVEDEMARQSKNLGVSYEEIKKFY-EDQNLISYLKDD 420
Query: 416 IFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
I ++ IL++++ + +K+ F +
Sbjct: 421 IKRERAKKKILENLKEVKGKKLNFRDFVN 449
>gi|225848209|ref|YP_002728372.1| trigger factor [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643641|gb|ACN98691.1| trigger factor [Sulfurihydrogenibium azorense Az-Fu1]
Length = 430
Score = 140 bits (351), Expect = 6e-31, Method: Composition-based stats.
Identities = 91/432 (21%), Positives = 198/432 (45%), Gaps = 18/432 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V+ + +E L R L + ++ + E +++I AN+ GFR G VP + +K+ Y
Sbjct: 1 MNVVVESNE-LVRTLTIKDEGEKVKNLVEEVVKEISKVANVPGFRKGNVPKNIVKAKYKN 59
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E + + EIL + + + + E I ++ ++S+++
Sbjct: 60 EIKEEVARNYVSRYLQEILEQYNLKPVTQ--------EVYFGEVEIVNDQEITFKVSFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ ++ ++V EV ++++++ + + + N + ++ E E GDKV + Y +
Sbjct: 112 APEFELKPYEGMEVEITKLEVKDEDVEKYIQNLLERNAQYIPEDKEVEEGDKVKIKYHIV 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E+ + IVGS L E + + G K GD+ E+E + +++ K
Sbjct: 172 SEKGEEEEDEFET---IVGSGTLRKEIEDAIKGKKVGDKVELENVPLYNEKGEEIG--KA 226
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ + EV + N++ ++G E+ + + +++ E + +Q+ +++ILD
Sbjct: 227 KVEIEVLEVSRKVIPEFNDEFVKKVGLGENVEEAKNKIKENLQKQVEEIKKQEAQQKILD 286
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
I+++Y F VP SL+E E + Q+ ++ + + E + A +
Sbjct: 287 KIASEYDFPVPNSLLELEIQNLAQRYAQQLQAYGINPN--REMLEAAREGLTKTAINNIR 344
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
VL I EK + V+E+E+ + + R+ E + L + N + +++ I
Sbjct: 345 VMFVLTKIAEKEGLTVSEDELNKEIERLAKRYN-TEAEDLKQYLTERNMIEGIKSDILRQ 403
Query: 420 KVIDHILKSVQI 431
K +D +++ I
Sbjct: 404 KALDMLVQKANI 415
>gi|315453780|ref|YP_004074050.1| peptidyl-prolyl cis /trans isomerase [Helicobacter felis ATCC
49179]
gi|315132832|emb|CBY83460.1| trigger factor (peptidyl-prolyl cis /trans isomerase, chaperone)
[Helicobacter felis ATCC 49179]
Length = 435
Score = 140 bits (351), Expect = 6e-31, Method: Composition-based stats.
Identities = 81/439 (18%), Positives = 186/439 (42%), Gaps = 22/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K +G + + + I K I GFR GKVP+ I Y
Sbjct: 1 MVLETKKLDGANARVYAKSSLEDFQQRAQKIAKRIAQKTKIDGFRRGKVPIDIINQRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERA---AMRPSITINEGESDITSGLIEGTVDLKLRLS 117
I E+ E++ ++ + + P+I E + + L+
Sbjct: 61 QIQEESQKELLDSVLKAGVEELKLAPHEMMGNPAIIKFE----------KQDQHFDIELN 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTV 175
+ PQI++S + + + + ++++ ++ ++AK F + T+ G V +
Sbjct: 111 IGLRPQIDLSGIETCIPSFSVEAITPEQVEERLKQLAKEKSTFSDAPEHTKISEGQGVVL 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ ++ + S K+ IVG L + + L+G++ G++K FP+D++ L
Sbjct: 171 DFEGLLEGKPFDGNSAKDFALIVGEGRLLKDFEDQLIGMQVGEEKSFSVHFPKDYASAAL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH-----SEFLVR 290
A K+V I ++ + ++ + + + + + +++K L
Sbjct: 231 ADKEVVFRVKIHKIQNREIPAIDEEFVKTVLNQEKEPTLDMLKERLKDQLFMEAKIKLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQY 349
Q++K Q+++ + FD+P ++VE E + +L++ MS + Q S +E +
Sbjct: 291 QELKDQLVENLEKALNFDLPHTVVEQEMDLVLRQSLQSMSKEEIEELQKDPSKVQEKRES 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ V ++ + + +I+V ++E+ LY + + +K+++H++K L
Sbjct: 351 LRERVLKSVKVTFIIDALARQEDIQVDDKEVFQTLYYEAMMTNQNPQKLIEHYEKNF-ML 409
Query: 410 AELRAPIFEDKVIDHILKS 428
++ + ED+++ +L
Sbjct: 410 PAVKMTLIEDRLLTFLLDR 428
>gi|221218120|ref|ZP_03589586.1| trigger factor [Borrelia burgdorferi 72a]
gi|221192068|gb|EEE18289.1| trigger factor [Borrelia burgdorferi 72a]
Length = 454
Score = 140 bits (351), Expect = 6e-31, Method: Composition-based stats.
Identities = 72/449 (16%), Positives = 189/449 (42%), Gaps = 16/449 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + N + + +N ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVVIRVSKNVIQEKYNSLLQDYSSRLKIQGFRIGKVPINVIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I + E + + + T+ E + + D + +Y+ P+
Sbjct: 67 TVLEEVINNSLKEFFKEESKMPLSYATPTVKE-----KNLKLNLDEDFEFTFTYETYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY----TVS 180
+I SFD++ + +I EV + D + E E + + ++ +
Sbjct: 122 KIPSFDEIDIKVEIPEVFIDDSDIDDEIKNLQIENSIIIEDEEGVVKEDSIVKVDFVELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + ++ F VG ++ + + + ++G++ +++ IE+ + D+ ++LAG
Sbjct: 182 DLSNEIVSTKRQGFVFTVGKSETYYDFDKDVIGMRINEERVIEKSYIADYKFEELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +++++ A + + ++ + E +
Sbjct: 242 KLKIKIKSIKKRDLPLIDDEFAQDISDKYNTLDDLKNFIRSSLLNIVEEKKETLKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN---VDSIDEEDLQYYHMLAK 355
IS K D+P S++E E + + + + + S
Sbjct: 302 STISEKLEIDIPHSMIEAEIEIAFKDAKRQNKNNMSLEEFKSIFYSSGYIGGDNLKDEIL 361
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + +++ + + + I+VTE +++ + +Q +++ + + N ++ L+
Sbjct: 362 GNLKSKLIMQKMVDLDPIKVTESDVEDEMARQSKNLGVSYEEIKKFY-EDQNLISYLKDD 420
Query: 416 IFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
I ++ IL++++ + +K+ F +
Sbjct: 421 IKRERAKKKILENLKEVKGKKLNFRDFVN 449
>gi|188994655|ref|YP_001928907.1| putative cell division trigger factor [Porphyromonas gingivalis
ATCC 33277]
gi|188594335|dbj|BAG33310.1| putative cell division trigger factor [Porphyromonas gingivalis
ATCC 33277]
Length = 490
Score = 139 bits (350), Expect = 7e-31, Method: Composition-based stats.
Identities = 59/460 (12%), Positives = 154/460 (33%), Gaps = 15/460 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K ++ + V I + + + R +AN+ GFR G +P+ IK +YGK
Sbjct: 33 MNVSIKNTDAVNAIATVAIEKADYANEVEKALRTYRQRANVPGFRKGMIPMGMIKKMYGK 92
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E I+ ++ + +++ P + T D + +
Sbjct: 93 GVKAEEINRVVGRELYRYIAENKLNVLGEPMPNEELQ----KEYDFDTTDDFEFVFDLAL 148
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +++ ++V + E+ IDRQ+ + + + + +
Sbjct: 149 SPVVDVVVDKSIRVPYYTIQPTEEMIDRQIESMRSSYGHSVEADEVTANDVVKGRLCELE 208
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + E + VG +++ +L+
Sbjct: 209 DGQPKEGGICVEEAMLLPAYMKDEEEKNK-FVGAAKNSVVIFNPSKAYNNNEYELSSLLK 267
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+I E +++ +E + ++ +E +R KV + +
Sbjct: 268 VDKSAIGEHTGDFSFEISSISRHEKAELNEEFFKQAFGEETDIKNEADLRVKVTEGVREQ 327
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + L + + + + +E+L+ + + +
Sbjct: 328 FTAESDYKFLIDLRRELEAQVGELQFPDALLKRWLKLSHTEWSDEELEKQYPAMIKDLTF 387
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALY----QQLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + +KN+I VT +E+++ Q ++ + L+ + + +A
Sbjct: 388 HVIKEDLVKKNDIVVTPQEVRNFAIIVAKNQFAQYGMSAVPQDALERYANTMMEKEDARR 447
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
+ E+K+ + + + I + V+ D+ +E
Sbjct: 448 NFFDRVTENKLAAALKEKLDIDAKTVSPDEFNKLMTEQPA 487
>gi|226321179|ref|ZP_03796718.1| trigger factor [Borrelia burgdorferi 29805]
gi|226233412|gb|EEH32154.1| trigger factor [Borrelia burgdorferi 29805]
Length = 454
Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats.
Identities = 72/449 (16%), Positives = 187/449 (41%), Gaps = 16/449 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + N + + +N ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVVIRVSKNVIQEKYNSLLQDYSSRLKIQGFRIGKVPINVIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I E + + + T+ E + + D + Y+ P+
Sbjct: 67 TVLEEVINNSFKEFFKEESKMPLSYATPTVKE-----KNLKLNLDEDFEFTFIYETYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY----TVS 180
+I SFD++ + +I EV + D + E E + + ++ +
Sbjct: 122 KIPSFDEIDIKVEIPEVFIDDSDIDDEIKNLQIENSIIIEDEEGVVKEDSIVKVDFVELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + ++ F VG ++ + + + ++G++ +++ IE+ + D+ ++LAG
Sbjct: 182 DLSNEIVSTKRQGFVFTVGKSETYYDFDKDVIGMRINEERVIEKSYIADYKFEELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +++++ A + + ++ + E +
Sbjct: 242 KLKIKIKSIKKRDLPLIDDEFAQDISDKYNTLDDLKNFIRSSLLNIVEEKKETLKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN---VDSIDEEDLQYYHMLAK 355
IS K D+P S++E E + + + + + S
Sbjct: 302 STISEKLEIDIPHSMIEAEIEIAFKDAKRQNKNNMSLEEFKSIFYSSGYIGGDNLKDEIL 361
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + +++ + + + I+VTE +++ + +Q +++ + + N ++ L+
Sbjct: 362 GNLKSKLIMQKMVDLDPIKVTESDVEDEMARQSKNLGVSYEEIKKFY-EDQNLISYLKDD 420
Query: 416 IFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
I ++ IL++++ + +K+ F +
Sbjct: 421 IKRERAKKKILENLKEVKGKKLNFRDFVN 449
>gi|187251132|ref|YP_001875614.1| trigger factor domain [Elusimicrobium minutum Pei191]
gi|186971292|gb|ACC98277.1| Trigger factor domain [Elusimicrobium minutum Pei191]
Length = 426
Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats.
Identities = 86/432 (19%), Positives = 167/432 (38%), Gaps = 19/432 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + E + +L V + + F + + ++S+A ++GFR GKVPL +K +
Sbjct: 13 KAKQLSKENCEIKLSVEANAKLVNKCFEDALVQVQSRAQMQGFRAGKVPLQLVKQNFPSH 72
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I ID II+ V + L P++T + +E + ++
Sbjct: 73 IKERAIDFIIRAGVAKALEIEKINPVTVPTLTKADFN------ALEESKPFSFECLVEVA 126
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD-KVTVDYTVS 180
P+ E ++ +++ + V +KE+D ++ EI ++N E + V Y
Sbjct: 127 PEFEPKNYTGIKIAKKADTVTDKEVDARIQEILEHNSRLEEDAEGVITDNVFAVVGYDAI 186
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ S + + + E + G K GD KE ED V
Sbjct: 187 KNGEKDFKLSADSELIDMSAPQTVVGLAEAVKGAKKGDLKEFTAKVGED---------DV 237
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++E+ + ++ A +GF+S A++ + +++ ++ + V QI +
Sbjct: 238 TFKVTVQEIKKKVLPALDETFAKDMGFDSIDALKTKVKETMEKDAKADSERDVIIQIENQ 297
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ +F +P+ LVE + N + N K E ++ +
Sbjct: 298 LVEHNSFALPKGLVEEQLNSTVDGFLQRYGGQNAKDIPAAQRKE-LADRMRENVEKDLRI 356
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
G ++ I +K NIE E + Q L + L E + F K + A I E K
Sbjct: 357 GYLVHAIAKKENIEANEADWQKELDKSLTENKKEEAARIKGFFKD--RKEHILATITERK 414
Query: 421 VIDHILKSVQIV 432
V D + + +I
Sbjct: 415 VFDFLKEKAEIK 426
>gi|224533663|ref|ZP_03674252.1| trigger factor [Borrelia burgdorferi CA-11.2a]
gi|224513336|gb|EEF83698.1| trigger factor [Borrelia burgdorferi CA-11.2a]
gi|312148358|gb|ADQ31017.1| trigger factor [Borrelia burgdorferi JD1]
Length = 454
Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats.
Identities = 73/449 (16%), Positives = 188/449 (41%), Gaps = 16/449 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + N + + +N ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVVIRVSKNVIQEKYNSLLQDYSSRLKIQGFRIGKVPINVIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I E + + + T+ E + + D + +Y+ P+
Sbjct: 67 TVLEEVINNSFKEFFKEESKMPLSYAAPTVKE-----KNLKLNLDEDFEFTFTYETYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY----TVS 180
+I SFD++ + +I EV + D + E E + + ++ +
Sbjct: 122 KIPSFDEIDIKVEIPEVFIDDSDIDDEIKNLQIENSIIIEDEEGVVKEDSIVKVDFVELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + ++ F VG ++ + + + ++G++ +++ IE+ + D+ K+LAG
Sbjct: 182 DLSNEIVSTKRQGFVFTVGKSETYYDFDKDVIGMRINEERVIEKSYIADYKFKELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +++++ A + + ++ + E +
Sbjct: 242 KLKIKIKSIKKRDLPLMDDEFAQDISDKYNTLDDLKNFIRSSLLNIVEEKKETLKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN---VDSIDEEDLQYYHMLAK 355
IS K D+P S++E E + + + + + S
Sbjct: 302 STISEKLEIDIPHSMIEAEIEIAFKDAKRQNKNNMSLEEFKSIFYSSGYIGGDNLKDEIL 361
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + +++ + + + I+VTE +++ + +Q +++ + + N ++ L+
Sbjct: 362 GNLKSKLIMQKMVDLDPIKVTESDVEDEMARQSKNLGVSYEEIKKFY-EDQNLISYLKDD 420
Query: 416 IFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
I ++ IL++++ + +K+ F +
Sbjct: 421 IKRERAKKKILENLKEVKGKKLNFRDFVN 449
>gi|295132505|ref|YP_003583181.1| trigger factor [Zunongwangia profunda SM-A87]
gi|294980520|gb|ADF50985.1| trigger factor [Zunongwangia profunda SM-A87]
Length = 440
Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats.
Identities = 66/463 (14%), Positives = 171/463 (36%), Gaps = 39/463 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + V I + + ++D R AN+ GFR G VP+ +K YG+
Sbjct: 1 MNITRENIDELNAVVKVDIAKDDYAPKVEKILKDYRKNANVPGFRKGHVPMGMVKKQYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L + ++++++E + + L++ P + +
Sbjct: 61 AVLVDEVNKLLQENLNKYLTEEKLDVLGNP-------IPKEQENFDWNKDNYTFEFEVGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+S + VT+ D+ ID+Q+ I K K+ E
Sbjct: 114 APEFEVSLDLEKPVTKYNIVADDTMIDKQIENIQKQYGKLVSKDEVEEGDIVAGTFKNEE 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK-- 238
+ ++ + LKT E + + I+
Sbjct: 174 EGIENETSIELEKIKGKRNLNKFVGAKVGDTIALKTKSLFEDDHDLIQHLKIEHDKAHDL 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFE----SESAMRGLCSQKIKQHSEFLVRQKVK 294
+ + F+I E+ ++ +L +L E + + ++ + ++ Q++
Sbjct: 234 DIEVEFTISEINKRELADLDQELFDKLFGEGKVTTVTELKEKIKEDAEKQFVQQSDQQLM 293
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+ + + K FD+P+ ++ + + EE+ + + +
Sbjct: 294 NDVTEALIEKTEFDLPKEFLQKWIRTV----------------GEKPLTEEEAKEEYQNS 337
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPGHE------KKMLDHFQK 404
++ + ++ G I ++N+I+V E +++ + +Q+ +F + +
Sbjct: 338 EKGLRYQLIEGKIVKENDIQVDFEALKAFAKDKIKEQMAQFGQMDPSDKELDDIAARILS 397
Query: 405 YPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ + L + +K+++ +++ +++VT+D+ E
Sbjct: 398 NQDEVKRLSEQLVNEKLLNFYKDNMKFDEKEVTYDEFVKEIYE 440
>gi|257460310|ref|ZP_05625413.1| trigger factor [Campylobacter gracilis RM3268]
gi|257442375|gb|EEV17515.1| trigger factor [Campylobacter gracilis RM3268]
Length = 437
Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats.
Identities = 84/446 (18%), Positives = 181/446 (40%), Gaps = 22/446 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + I + ++ E + + I GFR GKVP + + YGK
Sbjct: 1 MEVKAKMKDAANAVAASKIEAKQIAAKVEELAKKASKQLRIDGFRQGKVPTAVVLKRYGK 60
Query: 61 SILSETIDEIIKEIVPE---ILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + E++K ++ E IL K+ + P S E D+ + +
Sbjct: 61 QLEGDAKQELLKNMIDESLKILKKKQDEILSEPVF----------SKFDEKNGDIDVEIE 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVD 176
P++ + +++L V +KEID ++AE + + D D
Sbjct: 111 ISFRPEVSVEGYEELIPKFSSPRVTQKEIDEKVAEFLQMIAPLSKTNKKILAKDDFAKFD 170
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ VD + ++ +GS + ++GL+ G+++++ FP+D+ K LA
Sbjct: 171 FEGFVDGKPFDGGKAQDYVLQIGSNQFIPGFEDGMIGLRVGEERDVAVKFPQDYGAKSLA 230
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHS------EFLVR 290
GK + E+ + P + ++ E + + + L+
Sbjct: 231 GKDAIFKVKLHEIQAKKPAKELGEEELKQALPGEKEPSKEKFEARIKERIKNDKLQKLIN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQY 349
+ +K + D ++ K+ F +P+++VE E N S + +N ++ +
Sbjct: 291 EDLKPKFADALAEKFNFALPKAIVEQEINLQFNNAWSGFSKEQIEEFKNNKDALDKKREE 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ A+ V ++ + +K NI+V+++E+ A+Y + + + K+ LD ++ L
Sbjct: 351 FRKAAENSVKLTFLIDELAKKRNIDVSDQELVQAVYMEAYTYGANPKEHLDRYRNN-GML 409
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRK 435
++ + E+K+ + I + K
Sbjct: 410 PAVKMALIEEKLFNDIFSKQGKKEEK 435
>gi|308233831|ref|ZP_07664568.1| trigger factor [Atopobium vaginae DSM 15829]
gi|328943799|ref|ZP_08241264.1| peptidyl-prolyl cis-trans isomerase [Atopobium vaginae DSM 15829]
gi|327491768|gb|EGF23542.1| peptidyl-prolyl cis-trans isomerase [Atopobium vaginae DSM 15829]
Length = 467
Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats.
Identities = 80/482 (16%), Positives = 195/482 (40%), Gaps = 29/482 (6%)
Query: 1 MQVIEK--FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLY 58
M + + K ++ V + + + + + +DI K +GFR G+ P I +
Sbjct: 1 MNITATADKTTNDKVKITVTVSATDVDAAIDGAYKDIAKKYAFQGFRRGRAPRPVINGIV 60
Query: 59 GKS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
GK + ++ +++I+ + P++L + D A +P L+E D +
Sbjct: 61 GKQAVFAQATEDLIQNVQPQMLDELDIVAISKPD-------YGEDPKLVEEHKDFTVEAL 113
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+ P E+ ++D +T + EIDRQ+ ++ N +E + + + V
Sbjct: 114 VSVPPVCELDTYDAPSITMPPEHATDAEIDRQIDQLLSYNTTYEEDKDAKQATESSVVVL 173
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
V L + QF++ S + E + + G+K + KEI ED
Sbjct: 174 DVKNI-EGLPEFEGSARQFVLDSPYIPQEFAQGVTGMKLDESKEISWVRKED-----KKE 227
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V++N ++K + + + ++ A + F++ +R ++I+ + + + +
Sbjct: 228 TPVKVNVTLKTLKRAVKPELTDEFAKKSMGFDTVEKLRDAIKEEIENDKKTSLPSLKEDR 287
Query: 297 ILDYISNK-----YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+++ + D + + N L +++ + ++ + + ++ L H
Sbjct: 288 VVEAMGEHLKLDEVPEDYQKQVFSELANEFLSQLQRQGATLDMYLASRGIKSDDFLADLH 347
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ A+ R + L I K N+E TE +++ KK + F+K +
Sbjct: 348 VQAQERARQSLALNAIANKLNLEATEADVEEEF----KSVGKDYKKQMAQFKKN-GQMPA 402
Query: 412 LRAPIFEDKVIDHILKSV--QIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
+R I K + ++++ ++VD ++ + +++ + + K + +E+
Sbjct: 403 IRESIRRSKAVKWLVENASVEVVDEVAQANKDAEKKAKAPKKTSKKSADKASSKGAEKKT 462
Query: 470 SE 471
++
Sbjct: 463 AK 464
>gi|255023777|ref|ZP_05295763.1| trigger factor [Listeria monocytogenes FSL J1-208]
Length = 248
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 11/257 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + EG +L I ++ + + +R N+ GFR GKVP +G+
Sbjct: 1 MXVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGFRKGKVPRQIFNQRFGE 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +D ++ E+ + + P + I E L
Sbjct: 61 EALYQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESM---------EKGETWVLTAEVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVTVDYT 178
+ P++++ + L+V + E+ +E++ ++ ++ + VKE D V +D+
Sbjct: 112 VKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPAENGDTVILDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V E +N +GS E LVGLK GD+ +IE FPE++ +DLAG+
Sbjct: 172 GFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELTFPEEYHAEDLAGQ 231
Query: 239 KVRLNFSIKEVFSPLPV 255
V + E+ +
Sbjct: 232 PVVFKVKLHEIKTKEVP 248
>gi|198276175|ref|ZP_03208706.1| hypothetical protein BACPLE_02364 [Bacteroides plebeius DSM 17135]
gi|198270987|gb|EDY95257.1| hypothetical protein BACPLE_02364 [Bacteroides plebeius DSM 17135]
Length = 448
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 67/464 (14%), Positives = 163/464 (35%), Gaps = 40/464 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L V I + + ++ +R + N+ GFR G VP+ IK YG
Sbjct: 1 MNISLQNVDNVSAVLTVQIEKADYQEKVEKALKTLRQRVNMPGFRKGMVPMGLIKKQYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L E +D++++E V E + + P + E + + +
Sbjct: 61 SVLLEEVDKLLQEKVGEYIRENKVNMLGTP-------LPKENNANFETDENFEFSFDIAL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + ++ V V ++ +D+Q+ + ++ E + + +
Sbjct: 114 APEFNVELSNNDTVDYYDINVTDEMVDQQVNMYRQRTAKYDKVEDYQDKDMLKGLLAELD 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG-----------DQKEIERFFPED 229
+ E + ++ S + I G K D E E
Sbjct: 174 ENGNTKEGGVQVEGAVMMPSYMKNDDQKAIFNGAKVNTVLVFNPSVAFDNNEAELASLLK 233
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+++A K +F I+E+ +P + +L ++ E ++ +IK+
Sbjct: 234 VKKEEVANYKGNFSFQIEEITRMIPGDLTQELFDQVLGEGKAHSEEEFRAQIKETIAKQF 293
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + + V + +E + + S+N + EE
Sbjct: 294 EADSDYKFLLDVRTYLSEKVGKLQFADELMKRIMLENNKEKGEEFVSENYEKSLEEL--- 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF- 402
++ + N+I+V + ++ + + Q ++ ++L+++
Sbjct: 351 ---------TWHLIKEKLVAANDIKVEQADITNMAKEATRAQFAQYGMINVPDELLENYS 401
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K ++ L + E K+ + + V + + V+ ++
Sbjct: 402 KEMLKKRESVEALVNRVVESKLSEILKGQVTLNHKAVSAEEFNK 445
>gi|297566267|ref|YP_003685239.1| trigger factor [Meiothermus silvanus DSM 9946]
gi|296850716|gb|ADH63731.1| trigger factor [Meiothermus silvanus DSM 9946]
Length = 403
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 66/427 (15%), Positives = 163/427 (38%), Gaps = 40/427 (9%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSETI 67
EG + +L V +P++ + +++ + + SK + GFRPGK P I++ G+ +L E
Sbjct: 8 EGYRVKLRVEVPASEVNKAYDAVVREYASKVRVPGFRPGKAPAKVIEARLGRESLLEEVK 67
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
+ ++ P+ + + + + +E + P++++
Sbjct: 68 ERLLDTSYPKAVKELELFPVG----------VKLLEAHLEQGQPFTYVAEVENYPEVKLP 117
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
++ + ++ E+ ++ +++ + E+ + E E D+V ++
Sbjct: 118 NWREFKLEVPPIEITDEMVEQALQELRQRYGELVPVERPIEAKDQVFIETE--------- 168
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+F V E L+G GD+ + + L +
Sbjct: 169 ----DGARFPVDMEKALEHVREALLGKSAGDEVMVPVKDGD--------TVVKELKTKVL 216
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
EV + ++ + A +G ES +RG ++ + V++ Q+L+ ++
Sbjct: 217 EVKALQLPELDEEFAKTVGEESLEVLRGKVRMSLESQAARKVQEAKAEQLLEKLAEGLEA 276
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNV------DSIDEEDLQYYHMLAKRRVLTG 361
++P +++ E +L+ + ++ Q+ + EE A++R+
Sbjct: 277 EIPPTMLNREQQHLLEHMAEDLQKEKTTLQDYLKKLEEEGKLEEFRADLKTSAEKRIRRA 336
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ + E+ E+TEEE + L + + + + L L+ + +DK
Sbjct: 337 LAKEKLQEELGTELTEEEWNAYLADMARAYRTNVASLKKELGE--ETLERLKLQLLQDKA 394
Query: 422 IDHILKS 428
+ L+
Sbjct: 395 LAEALQK 401
>gi|153809069|ref|ZP_01961737.1| hypothetical protein BACCAC_03377 [Bacteroides caccae ATCC 43185]
gi|149128402|gb|EDM19621.1| hypothetical protein BACCAC_03377 [Bacteroides caccae ATCC 43185]
Length = 451
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 69/464 (14%), Positives = 157/464 (33%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + EL V + + ++ ++ +R KA I GFR G VP S IK +YGK
Sbjct: 1 MNVSLQNIDKVSAELTVKLEKADYQEKVDKELKSLRQKAQIPGFRKGMVPTSLIKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E +++ ++E V + + P + + + + + +
Sbjct: 61 SVIAEVVNKTLQEAVYNYIKENKVNMLGEPLPNEEKQQ----NIDFDTMDEFDFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV ++ ID Q+ + ++ + + + +
Sbjct: 117 APEFKAEVSTKDKVDYYTIEVSDEMIDNQVKMYTQRTGKYDKVDAYEDNDMLKGLLAQLD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD------ 234
+ E + ++ S + I K D D +
Sbjct: 177 EEGNTKEGGIQVEGAVLMPSYMKNDDQKAIFANAKVNDVLVFNPNVAYDGHAAELGSLLK 236
Query: 235 -----LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
K +F ++E+ +P + ++ + E KIK+
Sbjct: 237 IDKEIAKDVKSNFSFQVEEITRFVPGELTQEVFDQAFGEGVVKTEEEFRAKIKEEIAARF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + V + + + + E ++N D EE
Sbjct: 297 VADSDYKFLIDVRKVLMDKVGKLEFPDALLKRIMLLNNEEKGEEYVAENYDKSIEEL--- 353
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPG--HEKKMLDHF- 402
++ + E NNI+V +E++ + Q ++ +LD++
Sbjct: 354 ---------TWHLIKEQLVEANNIKVEQEDVLKMARDTTKAQFAQYGMLSIPDDVLDNYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K + L + + E K+ + V + ++ V+ ++
Sbjct: 405 QEMLKKKETINNLVSRVVEVKLAAALKAQVTLENKNVSIEEFNK 448
>gi|282878078|ref|ZP_06286883.1| trigger factor [Prevotella buccalis ATCC 35310]
gi|281299818|gb|EFA92182.1| trigger factor [Prevotella buccalis ATCC 35310]
Length = 451
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/463 (14%), Positives = 163/463 (35%), Gaps = 37/463 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + +L V + + + + ++D R KAN+ GFRPG+VP+ IK YG
Sbjct: 1 MNISFENPDKINGQLTVTVEESDYKEDVEKTLKDYRKKANMPGFRPGQVPMGMIKRQYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + I++++ V + + + + P + D +E +
Sbjct: 61 AVKMDVINKLVGRKVYDYIKENNIPMLGEPLASEKHDAVD-----LEKDAPYTFVFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +I ++ +VD+K ID+Q+ A + ET +
Sbjct: 116 APEFKIELNGKNKIDYYKIQVDDKLIDQQVDSFAARMGEYVKAETFEGNDMLKGDLRELD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEI----------ERFFPEDH 230
E ++ S E + G K GD E
Sbjct: 176 EQGNTKEGGLTVEAAVLMPSYIKVEEEKKKFDGAKLGDIITFNPRKAYASDVELASFLKV 235
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
+ + + ++ I E+ VN +L + + +KI + + +
Sbjct: 236 DKEQVKDHEGDFSYQITEINRFQNHAVNQELFDNIYGKDAVKDEKQFREKIAEGLQAQLE 295
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
+ + L V + +E + +N DE ++
Sbjct: 296 GESDYKFLLDTRAYAEKKVGKLEYPDELLKRI------------MRKNNPDKDEAFVEKN 343
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQS----ALYQQLGRFPGH--EKKMLDHF-- 402
+ + +++ ++ + + ++I+V +++++ A Q ++ + +D++
Sbjct: 344 YDESIKQLTWHLIKEQLVKAHDIKVEDQDIKEVARAAARAQFAQYGMSNVPDEYIDNYVN 403
Query: 403 --QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K ++ + K+ + +V++ +++++ D
Sbjct: 404 DLLKKQESVDAFIDRAVDTKLTQALKNAVKLNEKEISLDDFQK 446
>gi|303236810|ref|ZP_07323389.1| trigger factor [Prevotella disiens FB035-09AN]
gi|302482978|gb|EFL45994.1| trigger factor [Prevotella disiens FB035-09AN]
Length = 480
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 62/483 (12%), Positives = 155/483 (32%), Gaps = 17/483 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + L +++ D + ++D R +AN+ GFRPG+VP+ +K G
Sbjct: 1 MKISFENPDKINGLLTIVVEEADYKDDVEKALKDYRKRANMPGFRPGQVPMGLLKRQVGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I +TI++ + E + + + +P + + + +E +
Sbjct: 61 QIKMDTINKFLGENLQKYIVDNKIHMLGQPMASEKQ-----EAVELENPAPYTFMFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD--YT 178
P+ I + +VD+K ID+Q+ A ++ E +
Sbjct: 116 APEFNIELTSKDSIEYYDIKVDDKLIDQQVEMFASRAGHYDKAEEFDPEKRDMLKGDIRE 175
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ LE ++ + ++ G K GD S +++
Sbjct: 176 LDEKGNTLEGGVTVEGAVMMPQYIKVEDQKKLFDGCKLGDIITFNPRKAYPKSDAEISSL 235
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + ++ + E R + I
Sbjct: 236 LKIDRKEVGNHTGDFTFQITEISRFVSAENNKELWDAIYGADANIKDEAGFRAAIAEGIS 295
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ N + + + + + + N D E ++ + +
Sbjct: 296 KQLENDSNYKFMQDVRAYAEKKVGELKFPDELLKRIMQANNQDKDAEFIEKNFAPSINEL 355
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF----QKYPNA 408
++ I NNI+V + +++ + Q ++ ++ ++++ K
Sbjct: 356 KWHLIREKIAVANNIKVEDADVRESAIQMARAQFAQYGMDNVPEEYVNNYANEMLKKRET 415
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEA 468
+ L K+ + V++ + VT D+ + + T ++++A
Sbjct: 416 IDSLVEAALNRKLSAALKAVVKLKKKSVTMDEFNKLLAPEQEAAAEKPAKAKRTKKADKA 475
Query: 469 PSE 471
E
Sbjct: 476 EKE 478
>gi|219681824|ref|YP_002468210.1| trigger factor [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
gi|257471526|ref|ZP_05635525.1| trigger factor [Buchnera aphidicola str. LSR1 (Acyrthosiphon
pisum)]
gi|254788991|sp|B8D9Q1|TIG_BUCA5 RecName: Full=Trigger factor; Short=TF
gi|219624667|gb|ACL30822.1| trigger factor [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
Length = 442
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/452 (15%), Positives = 170/452 (37%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + + IP + +S + IR I GFR GK P+ I+ YG
Sbjct: 1 MNFFMEKNKDAGHRVTIKIPKTTVNNSLLQEFIKIRKTTKINGFRKGKTPIRVIQEKYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + +++++ E + + P I++ + + + Y++
Sbjct: 61 AIYYDIFKKLMQKFFYEFIKTEKIKIIGSPKFYIHQ-------DEDKKKEYFEYSVIYEL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
PQ +I ++V + E+ E++I + + + + D+VT++Y +
Sbjct: 114 YPQFQIKDIKQIKVNKINVEITEEDIKKNIETNKNKKNIWNPVNKAVKSYDRVTINYCIY 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N ++ K N+ FIV L + ++ D + F H K+L K +
Sbjct: 174 EKNKKIKKFDKDNISFIVSKNTLIPQLNYKIINHFVNDIIFFKIKFHAFHPEKELQNKDI 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
I ++ + ++ + + + ++ QI+
Sbjct: 234 TFKIKIIKIEKKQELESEKSNKKNITEKKTIQTDYQTIKNNLHSQINIITDKYLENQIIQ 293
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
I K +P L + E + ++ + + +N + ++++ K+R+
Sbjct: 294 KIVEKNILLLPPLLFQKEIKNLYKQYTKQ-----YQEENSNILEKKYHMSLDSEVKKRLY 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
I++ I N + E +Q + + + + +++ + K N ++ E
Sbjct: 349 FQIIIEQIILNNKLFADENNIQKLIKKISSNYK-NPMEIIKLYNKNKNLKNTMKNIELER 407
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
+ + + KS++I + F++ + + S E
Sbjct: 408 QAMLLLKKSIKIEKQNWNFERFLNYNWASHEE 439
>gi|188996271|ref|YP_001930522.1| trigger factor [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931338|gb|ACD65968.1| trigger factor [Sulfurihydrogenibium sp. YO3AOP1]
Length = 440
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 105/458 (22%), Positives = 215/458 (46%), Gaps = 20/458 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V+ + +E L R L + ++ + E I++I A +KGFR G VP + IK+ Y
Sbjct: 1 MNVVVE-AENLLRTLTIEDEGQKVKELAEEVIKEISKVAEVKGFRKGHVPKAVIKAKYKD 59
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I E I + +PEIL K + + E + +E L +++S+++
Sbjct: 60 AIKEEVAKAYINKYLPEILEKENLKPV--------TPEILFGNVKLENDEKLSMKVSFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ ++ ++V EV +++I+ + I +NNV +E + E E GDKV + Y +
Sbjct: 112 TPEFELKPYEGIEVEVVKLEVKDEDIENAIKNILENNVRYEDADKEIEDGDKVKIKYHII 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E+ + I+GS L E + + G K GD+ E+E + +++ K
Sbjct: 172 SDKGDEEEDEFET---IIGSGTLRKEIEDAIKGRKVGDKVELENMPLYNEKGEEIG--KA 226
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
++ I EV + N++ +G E+ + + I+ + L +Q+++++ILD
Sbjct: 227 KIEIEILEVKRKVVPEFNDEFVKSVGLGENVEEAKNKIRENIENQLKALRKQEIEQKILD 286
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
++ +Y F P SL+ E + ++Q+ ++ S K I E + A V
Sbjct: 287 KLAQEYDFPAPASLLRLEIDNLVQRYAAQLESYGIKPN--KEIIEAAEGNLTITAINNVR 344
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
++L I EK I V++EE+ + + + + M ++ + L +++ I
Sbjct: 345 VMLILSKIAEKEGITVSDEELDAQISKLAQSYNVSFADMREYLIQ-KGMLEGIKSDIARQ 403
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
K +D +++ I ++++ ++L + + E +++
Sbjct: 404 KALDILVEKANI--KEISKEELEAREKQENKESKEEQN 439
>gi|225551999|ref|ZP_03772939.1| trigger factor [Borrelia sp. SV1]
gi|225370997|gb|EEH00427.1| trigger factor [Borrelia sp. SV1]
Length = 454
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 67/449 (14%), Positives = 182/449 (40%), Gaps = 16/449 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + N + + +N ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVVIRVSKNAIQEKYNSLLQDYSSRLKIQGFRIGKVPINIIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I + E + + + T+ E + + D + +Y+ P+
Sbjct: 67 TVLEEVINNSLKEFFKEESKMPLSYATPTVKE-----KNLKLNLDEDFEFTFTYETYPEF 121
Query: 125 --EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD--YTVS 180
D++V +D+ +I ++ + N D + +
Sbjct: 122 KIPSFDEIDIKVEIPEVFIDDSDIYDEIKNLQIENSIIIEDREGVVKEDSIVKVDFVELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + ++ F VG ++ + + + ++G++ +++ +E+ + D+ ++LAG
Sbjct: 182 DLSNEIVSTKRQGFVFTVGKSETYYDFDKDVIGMRINEERVVEKSYIADYKFEELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +V+++ A + + ++ + E +
Sbjct: 242 KLKIKIKSIKKRDLPLVDDEFAQDISDKYNTLDDLKNFVRSNLLNIVEEKKDTLKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN---VDSIDEEDLQYYHMLAK 355
IS K D+P S++E E + + + + + S
Sbjct: 302 SNISEKLEIDIPHSMIEAEIEIAFKDTKRQNKNNMSLEEFKSIFYSSGYIGGDNLQDEIL 361
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + +++ + + + I+V E +++ + +Q +++ + + N ++ L+
Sbjct: 362 GNLKSKLIMQKMVDLDPIKVAESDVEDEMARQSKNLGVSYEEIKKFY-EDQNLISYLKDD 420
Query: 416 IFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
I ++ IL++++ + +K+ F +
Sbjct: 421 IKRERAKKKILENIKEVRGKKLNFKDFVN 449
>gi|189485255|ref|YP_001956196.1| trigger factor [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287214|dbj|BAG13735.1| trigger factor [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 446
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 91/429 (21%), Positives = 183/429 (42%), Gaps = 14/429 (3%)
Query: 11 LKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEI 70
+DV + N D IR +A I GFR GKVP++ I+ + ++ I
Sbjct: 20 CSVTMDVEVSENIAADEIESAFSRIRRQAKIDGFRHGKVPMNIIRQKFAGEAKDRAVESI 79
Query: 71 IKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFD 130
IK+ V + L K + + P I E LK R + + P+IE+ +
Sbjct: 80 IKKTVLDALKKEEFVSIGFPVIE---------EFDYEVGQTLKYRFTAERHPKIEVKDYK 130
Query: 131 DLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYTVSV-DNVILED 188
+ + ++I ++ +K +++ + + K N + + V++DY L +
Sbjct: 131 GIPLKKEIFKITDKSLEQNLEVLRKRNAKLVPSKSDKVTEKSFVSIDYDAFDAYGKELPE 190
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKE 248
KN + S + E + L GLK G +++I+ +P D+S + LAGK V + E
Sbjct: 191 IRAKNYVIDLNSENTVKEFKKALSGLKIGAERDIKIEYPSDYSSEILAGKTVTFKIKVIE 250
Query: 249 VFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFD 308
+ +N+D A +G E+ ++ + ++ + +KRQI++Y+ K F+
Sbjct: 251 IKEKEIPDLNDDFAKDMGIENLGNLKTKVKEIVETEEKRRQDMDIKRQIIEYLLEKNKFE 310
Query: 309 VPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIG 368
VP+SLV +++K++ M + V E + + A+ ++ +L I
Sbjct: 311 VPQSLVTENKKSLVEKMKNYMKRQGASEEYVKKQVELEQKKLKEEAENKIRLSYILNAIF 370
Query: 369 EKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS 428
+ N+ +T+ +++ + PG E + +F + + + K+ +L S
Sbjct: 371 KDENLAMTDADIEEEKSKMKTSNPGMENAVDKYFAEKKE---NIMLSLKGQKLFGFLLAS 427
Query: 429 VQIVDRKVT 437
+ +
Sbjct: 428 ANVETEEKD 436
>gi|119358064|ref|YP_912708.1| trigger factor [Chlorobium phaeobacteroides DSM 266]
gi|166229033|sp|A1BIQ7|TIG_CHLPD RecName: Full=Trigger factor; Short=TF
gi|119355413|gb|ABL66284.1| trigger factor [Chlorobium phaeobacteroides DSM 266]
Length = 427
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 78/439 (17%), Positives = 174/439 (39%), Gaps = 24/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ ++EL++I+ + +N+ +++ + +KGFR G VP IK L G
Sbjct: 1 MQKNITKVSDTEQELEIILTAEEYGTEYNQELDEAKRTIQVKGFRKGHVPTGLIKKLAGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + +++ + I+ + + A R I +LK++LSY+I
Sbjct: 61 AIEASVAEKMASKHFGTIVDEEKIKPASRAQIESVSY----------EGDELKIKLSYEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P E++++ D T+ + ++++ +++ I K + + + + D V D
Sbjct: 111 HPVFELNNYSDYTFTKARYTITDEDVQKEIDLILKGHGSLATVDEAALGTDTVIGDVEKL 170
Query: 181 V-DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
E +N F + + L G K G+ + KD
Sbjct: 171 DAAGEPEEGGKTENHHFNLEYLPEDNPFRISLEGAKAGETVNVATT------QKDPNTPV 224
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V ++KEV + +DL FE+ + ++++H +++
Sbjct: 225 VSYRITVKEVKRLELPELTDDLVKEITRQRFETVADFTADVRIQLEEHFGMKSDEELLES 284
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I + + P+S+V + N +++ + + K + + + + A++
Sbjct: 285 ISSKLIEENPVSTPKSMVASFANMLVENAKRQFGGKFPKGFD----ESQFTESIIPNAEK 340
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
++ I E NN+EVT+E++++ ++ + +K+ + + + I
Sbjct: 341 HARWLLISQKIAELNNVEVTDEDIKTYAEKEAEKSTPEQKEEIMSTYQSTEFRDYIADTI 400
Query: 417 FEDKVIDHILKSVQIVDRK 435
+DK+ D I V I +
Sbjct: 401 IKDKIYDIIKSQVTITEEP 419
>gi|126663137|ref|ZP_01734135.1| peptidyl-prolyl cis-trans isomerase, trigger factor [Flavobacteria
bacterium BAL38]
gi|126624795|gb|EAZ95485.1| peptidyl-prolyl cis-trans isomerase, trigger factor [Flavobacteria
bacterium BAL38]
Length = 441
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 80/464 (17%), Positives = 173/464 (37%), Gaps = 47/464 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + +K + L + V I +D + + D R A+I GFR G VP+S I+ YGK
Sbjct: 1 MNITKKQVDALNAIVTVAITKEDYSDKVEKVLADYRKNASISGFRKGAVPMSLIQKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L E ++++++ + LS P + E + + +
Sbjct: 61 AVLLEEVNKVLQASLNNYLSTEKLDILGNPIPVVTE-------SIDWDAENFSFDFELGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
PQ + VT+ DEK ++ Q+ IAK + + +
Sbjct: 114 APQFSVDLSAKNNVTKFNVIADEKMLNDQVDRIAKQYGKLISQSEVK-----ADYEVRGT 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD----------QKEIERFFPEDH 230
N + N + + + + +G K GD + +
Sbjct: 169 FTNEEKGINAPANFALDIFAN---KKVAKSFIGKKVGDVVAVETKGLFDDDHKLMDYLKV 225
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
S ++ G + +NF+I+E+ + +N +L +L E KIK+ +E
Sbjct: 226 SHDNVHGLDILVNFTIEEINAVEKAEMNQELFDKLFGEGVVKSVEEVKAKIKEDAEVQFA 285
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
Q+ ++ L+ +++ L +Q SA Q +
Sbjct: 286 QQADQKFLNDVTDFLIESTKFELPAAFLKKWIQTAGENPLSAEQAEEEYAK--------- 336
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPG---HEKK---MLD 400
A++ + ++ G + NN+++T E++++ + +Q+ +F E++ ++
Sbjct: 337 ---AEKGLRFQLIEGKVMADNNLQITFEDLKAHTAELIKKQMAQFGQLNPSEEEINGIVA 393
Query: 401 HFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ + L + +K++ + V+ ++V +DQ
Sbjct: 394 RVMSNQDEVKRLSEQVMSEKMLGLYKEKVKSKTKEVNYDQFIKE 437
>gi|216263664|ref|ZP_03435659.1| trigger factor [Borrelia afzelii ACA-1]
gi|215980508|gb|EEC21329.1| trigger factor [Borrelia afzelii ACA-1]
Length = 452
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 78/445 (17%), Positives = 187/445 (42%), Gaps = 14/445 (3%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSET 66
G K E + + N + + +N ++D S+ I+GFR GKVP+S I+ Y + + +
Sbjct: 9 LLPGSKVEAVIRVSKNIIQEKYNSLLQDYSSRLKIQGFRIGKVPISIIEKKYSEGLRATV 68
Query: 67 IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI-- 124
++E+I + E + +R S TI E + + D + Y+ P+
Sbjct: 69 LEEVINNSLKEFFKEEPKRPLSYASPTIKE-----ENLRLNLDKDFEFTFVYETYPEFKV 123
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN- 183
D++V +D+ +ID ++ + N E D + V +D+
Sbjct: 124 PNIDDIDIKVEVPEVFIDDSDIDNEIKSLQIENSIIIEDEEGVVKKDSIVKVDFVELDDL 183
Query: 184 -VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ +++ F VG ++ + + ++G++ +++ IE+ + D+ ++LAG +L
Sbjct: 184 LNEIVSTKRQDFVFTVGKSETYYDFDRDVIGMRINEERVIEKSYITDYKFEELAGSLKKL 243
Query: 243 NFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
IK + +++++ A + + ++ KI E +
Sbjct: 244 KIKIKSIKKRDLPLIDDEFAKDISERYNTLDDLKNFIRSKILSLVEEKKEALKLNKFFST 303
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED-LQYYHMLAKRRVL 359
IS K D+P S++E E + + + + ++ +++ + +
Sbjct: 304 ISEKLEIDIPRSMIEAEIEIAFKDAKRQNKMSLEEFKSIFYSSGYNGSDSLKDEILSNLK 363
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+ +++ + + + I+VTE +++ + +Q +++ + + N + L+ I
Sbjct: 364 SKLIIQKMVDLDPIKVTENDLKDEMVRQSENSGVSYEEIKKFY-EDQNLIFYLKDDIKRK 422
Query: 420 KVIDHILKSVQ-IVDRKVTFDQLFD 443
V IL S++ + ++V+F +
Sbjct: 423 IVEKKILASLKEVKGKQVSFKDFVN 447
>gi|311087364|gb|ADP67444.1| trigger factor [Buchnera aphidicola str. JF99 (Acyrthosiphon
pisum)]
Length = 442
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 71/452 (15%), Positives = 170/452 (37%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + + IP + +S + IR I GFR GK P+ I+ YG
Sbjct: 1 MNFFMEKNKDAGHRVTIKIPKTTVNNSLLQEFIKIRKTTKINGFRKGKTPIRVIQEKYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + +++++ E L + P I++ + + + Y++
Sbjct: 61 AIYYDIFKKLMQKFFYEFLKTEKIKIIGSPKFYIHQ-------DEDKKKEYFEYSVIYEL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
PQ +I ++V + E+ E++I + + + + D+VT++Y +
Sbjct: 114 YPQFQIKDIKQIKVNKINVEITEEDIKKNIETNKNKKNIWNPVNKAVKSYDRVTINYCIY 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N ++ K N+ FIV L + ++ D + F H K+L K +
Sbjct: 174 EKNKKIKKFDKDNISFIVSKNTLIPQLNYKIINHFVNDIIFFKIKFHAFHPEKELQNKDI 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
I ++ + ++ + + + ++ QI+
Sbjct: 234 TFKIKIIKIEKKQELESEKSNKKNITEKKTIQTDYQTIKNNLHSQINIITDKYLENQIIQ 293
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
I K +P L + E + ++ + + +N + ++++ K+R+
Sbjct: 294 KIVEKNILLLPPLLFQKEIKNLYKQYTKQ-----YQEENSNILEKKYHMSLDSEVKKRLY 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
I++ I N + E +Q + + + + +++ + K N ++ E
Sbjct: 349 FQIIIEQIILNNKLFADENNIQKLIKKISSNYK-NPMEIIKLYNKNKNLKNTMKNIELER 407
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
+ + + KS++I + F++ + + S E
Sbjct: 408 QAMLLLKKSIKIEKQNWNFERFLNYNWASHEE 439
>gi|152989914|ref|YP_001355636.1| trigger factor [Nitratiruptor sp. SB155-2]
gi|166229910|sp|A6Q1C0|TIG_NITSB RecName: Full=Trigger factor; Short=TF
gi|151421775|dbj|BAF69279.1| trigger factor [Nitratiruptor sp. SB155-2]
Length = 437
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 83/439 (18%), Positives = 196/439 (44%), Gaps = 22/439 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + ++ I + + +++ NI GFR GKVP + IK YG
Sbjct: 1 MEINAQKLNEANATVEAKIAKQDVEKKEEKIAKELAKTMNIPGFRKGKVPPAVIKKRYGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER---AAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + E+++E + + L + P E ++ ++E
Sbjct: 61 KLAQDAEAELVREALDQALEELGIEKEAMLGEPRFAKYEKGEEVIEMVLEIG-------- 112
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+ P I+I+ ++++ + +V ++E+++++ E+A F+ E + + V
Sbjct: 113 --VRPNIDITGYEEVIPEYEEPQVSDEEVEKRIEELADAMAQFKEIEEDRPAKEGDLVVI 170
Query: 178 TVS---VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
D +E S +N + +GS E + G+K G+ K IE FPED+ K+
Sbjct: 171 DFKGTLEDGSEIEGGSAQNFELRLGSGQFIPGFEEQVEGMKKGETKTIEVTFPEDYPNKE 230
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIK----QHSEFLVR 290
LAGKK ++ + + ++++LA ++ + ++ + L + K + L
Sbjct: 231 LAGKKANFEVTLHTIKEKEKINIDDELAKKMLQKEDATLDELKEEVRKQLKSEKLSKLYN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQY 349
+++K ++++ + K+ FD+P+++V+ E + L +MS + + EE +
Sbjct: 291 EELKPKLVEALVEKFEFDLPKNIVDQEIDVQLNNKAAQMSEEEIKELRENKEKLEELRKE 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
A++ V ++ + + I V ++E+ +Y + + + +++L +++ L
Sbjct: 351 IEPEAQKSVKATFIVDALAKAEGINVADQEVVQTIYYEALQMGRNPQEILKAYEE-QGLL 409
Query: 410 AELRAPIFEDKVIDHILKS 428
++ + ED+++ H+L
Sbjct: 410 PAIKMAMIEDRLLTHLLSK 428
>gi|15617072|ref|NP_240285.1| trigger factor [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
gi|11387133|sp|P57546|TIG_BUCAI RecName: Full=Trigger factor; Short=TF
gi|25403637|pir||C84985 trigger factor [imported] - Buchnera sp. (strain APS)
gi|10039137|dbj|BAB13171.1| trigger factor [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
Length = 442
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/452 (15%), Positives = 169/452 (37%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + + IP + +S + IR I GFR GK P+ I+ YG
Sbjct: 1 MNFFMEKNKDAGHRVTIKIPKTTVNNSLLQEFIKIRKTTKINGFRKGKTPIRVIQEKYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + +++++ E + + P I++ + + + Y++
Sbjct: 61 AIYYDIFKKLMQKFFHEFIKTEKIKIIGSPKFYIHQ-------DEDKKKEYFEYSVIYEL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
PQ +I ++V + E+ E++I + + + + D+VT++Y +
Sbjct: 114 YPQFQIKDIKQIKVNKINVEITEEDIKKNIETNKNKKNIWNPVNKAVKSYDRVTINYCIY 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N ++ K N+ FIV L + ++ D + F H K+L K +
Sbjct: 174 EKNKKIKKFDKDNISFIVSKNTLIPQLNYKIINHFVNDIIFFKIKFHAFHPEKELQNKDI 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
I ++ + ++ + + + ++ QI+
Sbjct: 234 TFKIKIIKIEKKQELESEKSNKKNITEKKTIQTDYQTIKNNLHSQINIITDKYLENQIIQ 293
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
I K +P L + E + ++ + +N + ++++ K+R+
Sbjct: 294 KIVEKNILLLPPLLFQKEIKNLYKQYTKQYQE-----ENSNILEKKYHMSLDSEVKKRLY 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
I++ I N + E +Q + + + + +++ + K N ++ E
Sbjct: 349 FQIIIEQIILNNKLFADENNIQKLIKKISSNYK-NPMEIIKLYNKNKNLKNTMKNIELER 407
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
+ + + KS++I + F++ + + S E
Sbjct: 408 QAMLLLKKSIKIEKQNWNFERFLNYNWASHEE 439
>gi|111115439|ref|YP_710057.1| trigger factor [Borrelia afzelii PKo]
gi|123341308|sp|Q0SMP7|TIG_BORAP RecName: Full=Trigger factor; Short=TF
gi|110890713|gb|ABH01881.1| trigger factor [Borrelia afzelii PKo]
Length = 452
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 80/445 (17%), Positives = 188/445 (42%), Gaps = 14/445 (3%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSET 66
G K E + + N + + +N ++D S+ I+GFR GKVP+S I+ Y + + +
Sbjct: 9 LLPGSKVEAVIRVSKNIIQEKYNSLLQDYSSRLKIQGFRIGKVPISIIEKKYSEGLRATV 68
Query: 67 IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI-- 124
++E+I + E + +R S TI E + + D + Y+ P+
Sbjct: 69 LEEVINNSLKEFFKEEPKRPLSYASPTIKE-----ENLRLNLDKDFEFTFVYETYPEFKV 123
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNV 184
D++V +D+ +ID ++ + N E D + V +D++
Sbjct: 124 PNIDDIDIKVEVPEVFIDDSDIDNEIKSLQIENSIIIEDEEGVVKKDSIVKVDFVELDDL 183
Query: 185 ILEDQSKKNVQFIV--GSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ E S K F+ G ++ + + ++G++ +++ IE+ + D+ ++LAG +L
Sbjct: 184 LNEIVSTKRQDFVFTVGKSETYYDFDRDVIGMRINEERVIEKSYITDYKFEELAGSLKKL 243
Query: 243 NFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
IK + +++++ A + + ++ KI E +
Sbjct: 244 KIKIKSIKKRDLPLIDDEFAKDISERYNTLDDLKNFIRSKILSLVEEKKEALKLNKFFST 303
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED-LQYYHMLAKRRVL 359
IS K D+P S++E E + + + + ++ +++ + +
Sbjct: 304 ISEKLEIDIPRSMIEAEIEIAFKDAKRQNKMSLEEFKSMFYSSGYNGSDSLKDEILSNLK 363
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+ +++ + + + I+VTE +++ + +Q +++ + + N + L+ I
Sbjct: 364 SKLIIQKMVDLDPIKVTENDLKDEMVRQSENSGVSYEEIKKFY-EDQNLIFYLKDDIKRK 422
Query: 420 KVIDHILKSVQ-IVDRKVTFDQLFD 443
V IL S++ + ++V+F +
Sbjct: 423 IVEKKILASLKEVKGKQVSFKDFVN 447
>gi|270295708|ref|ZP_06201908.1| trigger factor tig [Bacteroides sp. D20]
gi|270273112|gb|EFA18974.1| trigger factor tig [Bacteroides sp. D20]
Length = 451
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 65/453 (14%), Positives = 163/453 (35%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + + ++ ++ R KA I GFR G VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQEKVDKSLKSFRQKAQIPGFRKGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S L+E +++++ E V + + P ++ + + + + +
Sbjct: 61 SALAEEVNKLLSETVYKYIQDNKVNILGEPLPNEDKQQ----EIDFDTMEEFEFLFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV ++ +D Q+ + N ++ + + + +
Sbjct: 117 APEFKAEVSAKDKVDYYTIEVTDEMVDNQVKAYTQRNGKYDKVDVYEDNDMLKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E + ++ S E I G K D D + +L+
Sbjct: 177 EEGNTKEGGIQVEGAVMMPSYMKNDEQKSIFAGAKVNDVLVFNPNTAWDGNAAELSSLLK 236
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ EV S V ++ + + + + +E R KVK I +
Sbjct: 237 IDKEAAPEVKSNFSFQV-EEITRFVPGDLTQEIFDQVFGEGNVKTEEEFRAKVKEVIANQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + + + N +E ++ + + +
Sbjct: 296 FVADSDYKFLIDARKMLTEKVGKLEFPDALLKRIMRLNNPDKEESFVEDNYDKSIEELTW 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + + N+I+V +E++ + + Q ++ +++L+++ K ++
Sbjct: 356 HLIKEQLVKANDIKVEQEDITNMAKEATRAQFAQYGMMSVPEEILENYSKEMLKKKESIE 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L + E K+ + V++ + V+ ++
Sbjct: 416 GLVNRVVESKLAAALKSQVELEHKNVSAEEFNK 448
>gi|219682379|ref|YP_002468763.1| trigger factor [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
gi|254788992|sp|B8D803|TIG_BUCAT RecName: Full=Trigger factor; Short=TF
gi|219622112|gb|ACL30268.1| trigger factor [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
Length = 442
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 71/452 (15%), Positives = 169/452 (37%), Gaps = 14/452 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + + IP + +S + IR I GFR GK P+ I+ YG
Sbjct: 1 MNFFMEKNKDAGHRVTIKIPKTTVNNSLFQEFIKIRKTTKINGFRKGKTPIRVIQEKYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + +++++ E L + P I++ + + + Y++
Sbjct: 61 AIYYDIFKKLMQKFFYEFLKTEKIKIIGSPKFYIHQ-------DEDKKKEYFEYSVIYEL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
PQ +I ++V + E+ E++I + + + + D+VT++Y +
Sbjct: 114 YPQFQIKDIKQIKVNKINVEITEEDIKKNIETNKNKKNIWNPVNKAVKSYDRVTINYCIY 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N ++ K N+ FIV L + ++ D + F H K+L K +
Sbjct: 174 EKNKKIKKFDKDNISFIVSKNTLIPQLNYKIINHFVNDIIFFKIKFHAFHPEKELQNKDI 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
I ++ + ++ + + + ++ QI+
Sbjct: 234 TFKIKIIKIEKKQELESEKSNKKNITEKKTIQTDYQTIKNNLHSQINIITDKYLENQIIQ 293
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
I K +P L + E + ++ + +N + ++++ K+R+
Sbjct: 294 KIVEKNILLLPPLLFQKEIKNLYKQYTKQYQE-----ENSNILEKKYHMSLDSEVKKRLY 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
I++ I N + E +Q + + + + +++ + K N ++ E
Sbjct: 349 FQIIIEQIILNNKLFADENNIQKLIKKISSNYK-NPMEIIKLYNKNKNLKNTMKNIELER 407
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
+ + + KS++I + F++ + + S E
Sbjct: 408 QAMLLLKKSIKIEKQNWNFERFLNYNWASHEE 439
>gi|226321915|ref|ZP_03797441.1| trigger factor [Borrelia burgdorferi Bol26]
gi|226233104|gb|EEH31857.1| trigger factor [Borrelia burgdorferi Bol26]
Length = 454
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 71/449 (15%), Positives = 187/449 (41%), Gaps = 16/449 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + N + + +N ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVVIRVSKNVIQEKYNSLLQDYSSRLKIQGFRIGKVPINVIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I E + + + T+ E + + D + +Y+ P+
Sbjct: 67 TVLEEVINNSFKEFFKEESKIPLSYATPTVKE-----KNLKLNLDKDFEFTFTYETYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY----TVS 180
+I SFD++ + +I EV + D + E E + + ++ +
Sbjct: 122 KIPSFDEIDIKVEIPEVFIDDSDIDDEIKNLQIENSIIIEDEEGVVKEDSIVKVDFVELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + ++ F VG ++ + + + ++ ++ +++ IE+ + D+ ++LAG
Sbjct: 182 DLSNEIVSTKRQGFVFTVGKSETYYDFDKDVISMRINEERVIEKSYIADYKFEELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +++++ A + + ++ + E +
Sbjct: 242 KLKIKIKSIKKRDLPLIDDEFAQDISDKYNTLDDLKNFIRSSLLNIVEEKKETLKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN---VDSIDEEDLQYYHMLAK 355
IS K D+P S++E E + + + + + S
Sbjct: 302 STISEKLEIDIPHSMIEAEIEIAFKDAKRQNKNNMSLEEFKSIFYSSGYIGGDNLKDEIL 361
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + +++ + + + I+VTE +++ + +Q +++ + + N ++ L+
Sbjct: 362 GNLKSKLIMQKMVDLDPIKVTESDVEDEMARQSKNLGVSYEEIKKFY-EDQNLISYLKDD 420
Query: 416 IFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
I ++ IL++++ + +K+ F +
Sbjct: 421 IKRERAKKKILENLKEVKGKKLNFRDFVN 449
>gi|319790340|ref|YP_004151973.1| trigger factor [Thermovibrio ammonificans HB-1]
gi|317114842|gb|ADU97332.1| trigger factor [Thermovibrio ammonificans HB-1]
Length = 436
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 96/429 (22%), Positives = 198/429 (46%), Gaps = 10/429 (2%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + +L + + + + + N ++I +A I GFRPGK P+ +K Y +
Sbjct: 1 MKYQLTQESPVIYKLTLELEQDEVQPAVNAAAKEIGKQAKIPGFRPGKAPVHVVKKFYAQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I S I+ ++ + + E++ K P + E + D+ + + V L+++ ++
Sbjct: 61 EIKSALINTLLAQKIGEVIEKEGLELIGEPR--LAEFDVDLKNNTAKAVVILEVKPQIEL 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + ++V V EKE++R + + ++ E E++ GD V ++Y +
Sbjct: 119 KPE----DYKGIEVKVQKRAVGEKEVERVIEGLRNQAAQWKEVEREAKEGDLVELEYETA 174
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V+ + + V ++G+ L+ E E + G K G++ E+E PED D+AGKKV
Sbjct: 175 VEGIEEPQKG--EVAVVLGANQLWPEVEEAVKGKKAGEEGEVEFEAPEDEKYGDVAGKKV 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++ F +K V VN++ A R GFES M+ + I+ E +++++ QI+D
Sbjct: 233 KVKFKVKAVKEKELPEVNDEFAKRFGFESLEDMKKRILEDIEIAEETREQEEIEDQIVDA 292
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ K VP S++E E Q ++ A ++ + ++ A++ V
Sbjct: 293 LLKKVDVPVPPSMLELEIQAQAQNQLTRLAQAGFNVNQLN--PQTVVEMVRPTAEKTVKV 350
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
++L + E IEVTEE+++ + + + + + + ++ I K
Sbjct: 351 KLLLEKVAELEGIEVTEEDLEEEIKKLADAAFNGDYVLARKSLEERGLIEMIKKDILRQK 410
Query: 421 VIDHILKSV 429
+D +++
Sbjct: 411 ALDRLVELA 419
>gi|160882385|ref|ZP_02063388.1| hypothetical protein BACOVA_00334 [Bacteroides ovatus ATCC 8483]
gi|260172008|ref|ZP_05758420.1| FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor)
[Bacteroides sp. D2]
gi|299148141|ref|ZP_07041203.1| trigger factor [Bacteroides sp. 3_1_23]
gi|315920321|ref|ZP_07916561.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp. D2]
gi|156112198|gb|EDO13943.1| hypothetical protein BACOVA_00334 [Bacteroides ovatus ATCC 8483]
gi|298512902|gb|EFI36789.1| trigger factor [Bacteroides sp. 3_1_23]
gi|313694196|gb|EFS31031.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp. D2]
Length = 451
Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats.
Identities = 68/464 (14%), Positives = 157/464 (33%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + EL V + + ++ ++ +R KA I GFR G VP S IK +YGK
Sbjct: 1 MNVSLQNIDKVSAELTVKLEKADYQEKVDKELKSLRQKAQIPGFRKGMVPTSLIKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E +++ ++E V + + P + + + + + +
Sbjct: 61 SVIAEVVNKALQEAVYNYIKENKVNMLGEPLPNEEKQQ----NIDFDTMEEFDFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV ++ ID Q+ + ++ + + + +
Sbjct: 117 APEFKAEVSAKDKVDYYTIEVSDEMIDNQVKMYTQRTGKYDKVDAYEDNDMLKGLLAQLD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD------ 234
+ E + ++ + + I K D D +
Sbjct: 177 EEGNTKEGGIQVEAAVLMPAYMKNDDQKAIFANAKVNDVLVFNPNVAYDGHAAELGSLLK 236
Query: 235 -----LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
K +F ++E+ +P + ++ + E KIK+
Sbjct: 237 IDKEIAKDVKSDFSFQVEEITRFVPGELTQEVFDQAFGEGVVKTEEEFRAKIKEEIAARF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L I V + + + + E ++N D EE
Sbjct: 297 VADSDYKFLIDIRKVMMEKVGKLEFSDALLKRIMLLNNEEKGEEYVAENYDKSIEEL--- 353
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPG--HEKKMLDHF- 402
++ + E N+I+V +E++ + Q ++ +LD++
Sbjct: 354 ---------TWHLIKEQLVEANDIKVEQEDVLKMARETTKAQFAQYGMLSIPDDVLDNYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K + L + + E K+ + V + ++ V+ ++
Sbjct: 405 QEMLKKKETINNLVSRVVEVKLAAALKAQVTLENKNVSIEEFNK 448
>gi|313680149|ref|YP_004057888.1| trigger factor [Oceanithermus profundus DSM 14977]
gi|313152864|gb|ADR36715.1| trigger factor [Oceanithermus profundus DSM 14977]
Length = 406
Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats.
Identities = 69/421 (16%), Positives = 153/421 (36%), Gaps = 37/421 (8%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL-SETI 67
G ++ V +P+ ++ + E ++ R + + GFRPGK P I + G+ E
Sbjct: 8 SGASAKVRVEVPAEQVEKTTRELLDAYRRRLKVPGFRPGKAPDKVILARVGEEAFWDEVR 67
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
+ +I+ PE + + A + E + ++ P++E+
Sbjct: 68 ERLIEASYPEAVRELGLAAIAARLVEGREAPL--------AGAPYAYTVEVELYPEVELP 119
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ ++ + EV + +D + ++ + + + E + + +
Sbjct: 120 DWKSFELGVEKPEVTDAMVDEALEDLRRRYAEVQTVDREVQ-------------EGDHVV 166
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ +F + E L+G K GD EI E ++ +
Sbjct: 167 VEVDDGSRFPIELDRAEPHVREALLGKKAGDSFEIPVMSEEG-------EVVRQVPTRLI 219
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
EV ++ + A L E+ +R + ++ +E + K+ +L+ ++
Sbjct: 220 EVKEVRLPELDEEFAKTLEAENLDDLRAKVQRSLEAAAERDYLEARKQALLEKLAEALEV 279
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS------IDEEDLQYYHMLAKRRVLTG 361
++P S++ +E +L+ V ++ + EE A+ RV G
Sbjct: 280 EIPSSMIRDEERAVLRDVEEDLQRQEIPLADYLKGLEREGKLEEFQADLRKQAEMRVRRG 339
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ L + E +VT+EE + L R+ + + AL L+ + DK
Sbjct: 340 LALEKLSEDLGTQVTDEEWDAYLKSYAERYGLKPPEFKQAVGE--EALENLKLRLLRDKA 397
Query: 422 I 422
+
Sbjct: 398 L 398
>gi|160890569|ref|ZP_02071572.1| hypothetical protein BACUNI_03012 [Bacteroides uniformis ATCC 8492]
gi|317479887|ref|ZP_07939004.1| hypothetical protein HMPREF1007_02121 [Bacteroides sp. 4_1_36]
gi|156859568|gb|EDO52999.1| hypothetical protein BACUNI_03012 [Bacteroides uniformis ATCC 8492]
gi|316903961|gb|EFV25798.1| hypothetical protein HMPREF1007_02121 [Bacteroides sp. 4_1_36]
Length = 451
Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats.
Identities = 65/453 (14%), Positives = 163/453 (35%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + + ++ ++ R KA I GFR G VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQEKVDKSLKSFRQKAQIPGFRKGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S L+E +++++ E V + + P ++ + + + + +
Sbjct: 61 SALAEEVNKLLSETVYKYIQDNKVNILGEPLPNEDKQQ----EIDFDTMEEFEFLFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV ++ +D Q+ + N ++ + + + +
Sbjct: 117 APEFKAEVSAKDKVDYYTIEVTDEMVDNQVKAYTQRNGKYDKVDVYEDNDMLKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E + ++ S E I G K D D + +L+
Sbjct: 177 EEGNTKEGGIQVEGAVMMPSYMKNDEQKAIFAGAKVNDVLVFNPNTAWDGNAAELSSLLK 236
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ EV S V ++ + + + + +E R KVK I +
Sbjct: 237 IDKEAAPEVKSNFSFQV-EEITRFVPGDLTQEIFDQVFGEGNVKTEEEFRAKVKEVIANQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + + + N +E ++ + + +
Sbjct: 296 FVADSDYKFLIDARKMLTEKVGKLEFPDALLKRIMRLNNPDKEESFVEDNYDKSIEELTW 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + + N+I+V +E++ + + Q ++ +++L+++ K ++
Sbjct: 356 HLIKEQLVKANDIKVEQEDITNMAKEATRAQFAQYGMMSVPEEILENYSKEMLKKKESIE 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L + E K+ + V++ + V+ ++
Sbjct: 416 GLVNRVVESKLATALKSQVELEHKNVSAEEFNK 448
>gi|237719058|ref|ZP_04549539.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
2_2_4]
gi|229451437|gb|EEO57228.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
2_2_4]
Length = 451
Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats.
Identities = 68/464 (14%), Positives = 157/464 (33%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + EL V + + ++ ++ +R KA I GFR G VP S IK +YGK
Sbjct: 1 MNVSLQNIDKVSAELTVKLEKADYQEKVDKELKSLRQKAQIPGFRKGMVPTSLIKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E +++ ++E V + + P + + + + + +
Sbjct: 61 SVIAEVVNKALQEAVYNYIKENKVNMLGEPLPNEEKQQ----NIDFDTMEEFDFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV ++ ID Q+ + ++ + + + +
Sbjct: 117 APEFKAEVSAKDKVDYYAIEVSDEMIDNQVKMYTQRTGKYDKVDAYEDNDMLKGLLAQLD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD------ 234
+ E + ++ + + I K D D +
Sbjct: 177 EEGNTKEGGIQVEAAVLMPAYMKNDDQKAIFANAKVNDVLVFNPNVAYDGHAAELGSLLK 236
Query: 235 -----LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
K +F ++E+ +P + ++ + E KIK+
Sbjct: 237 IDKEIAKDVKSDFSFQVEEITRFVPGELTQEVFDQAFGEGVVKTEEEFRAKIKEEIAARF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L I V + + + + E ++N D EE
Sbjct: 297 VADSDYKFLIDIRKVMMEKVGKLEFSDALLKRIMLLNNEEKGEEYVAENYDKSIEEL--- 353
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPG--HEKKMLDHF- 402
++ + E N+I+V +E++ + Q ++ +LD++
Sbjct: 354 ---------TWHLIKEQLVEANDIKVEQEDVLKMARETTKAQFAQYGMLSIPDDVLDNYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K + L + + E K+ + V + ++ V+ ++
Sbjct: 405 QEMLKKKETINNLVSRVVEVKLAAALKAQVTLENKNVSIEEFNK 448
>gi|284036529|ref|YP_003386459.1| trigger factor [Spirosoma linguale DSM 74]
gi|283815822|gb|ADB37660.1| trigger factor [Spirosoma linguale DSM 74]
Length = 448
Score = 137 bits (343), Expect = 5e-30, Method: Composition-based stats.
Identities = 71/466 (15%), Positives = 165/466 (35%), Gaps = 50/466 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + + +++++D K +KGFRPG VP S ++ +YGK
Sbjct: 1 MDITLEKASDTNASLKITLTPADYKPEVDKKLKDYGRKVQLKGFRPGHVPASLVQKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SIL + I+ ++ + V + + + + P + + D + +
Sbjct: 61 SILVDEINSMLSKTVSQYIRENKLQVVGDPVPD----REKADAIDWDNQSDFAFSYTLGL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+ +I D VTQ + E EI+ +A++ + F E+ D T+ +
Sbjct: 117 ASEFDIDFSDLPSVTQYEIQAGETEINSTIADLQQR---FHNHAHGEEVNDGDTIYGELK 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERF----------FPEDH 230
N ++ + + + VG K GD
Sbjct: 174 QVNGEFSAKTA------FPTNQMAEDAKGQFVGKKKGDVVTFVLEQAFPDEKARANATGV 227
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
++ A F + ++ P +N + ++ + K+ + +
Sbjct: 228 KKEEAAELTGEFTFEVDDITRHEPAELNQEFFDKVLGVGAVSDEEQFRTKVAEIIKGNYG 287
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
++ + + I + P L + ++ + N+ + IDE+ ++
Sbjct: 288 RESAQLLRLDIEKTLIDNTPILL-------PDEFLKNWLLEVNEGKFTPEQIDEQYDEF- 339
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQS----ALYQQLGRFPGHEKKMLDHF---- 402
+ V ++ I EK +I V +E+ + + +Q G +++M
Sbjct: 340 ----TKSVKLQLIKNKIAEKADINVEFDEVLAVTRLMVQEQFGFMGSEDEEMNKTIDRIA 395
Query: 403 -------QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ +++DKVI++ + +V +++T D+
Sbjct: 396 RNYLMDEKNNGQNYTNTFNRVYDDKVIEYTKTQITVVSQEITVDEF 441
>gi|255690575|ref|ZP_05414250.1| trigger factor [Bacteroides finegoldii DSM 17565]
gi|260624037|gb|EEX46908.1| trigger factor [Bacteroides finegoldii DSM 17565]
Length = 451
Score = 137 bits (343), Expect = 5e-30, Method: Composition-based stats.
Identities = 64/453 (14%), Positives = 164/453 (36%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + EL V + + ++ ++ +R K ++ GFR G VP S +K +YGK
Sbjct: 1 MNVSLQNIDKVSAELTVKLEKADYQEKVDKELKTLRQKVDMPGFRKGMVPASLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E +++ ++E + + + P + + + + + +
Sbjct: 61 SVIAEVVNKALQEAIYNYIRENKVNMLGEPLPNEEKQQ----NIDFDTMDEFDFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + D +V EV ++ ID Q+ + ++ +T + + +
Sbjct: 117 APEFKAEVSDKDKVDYYTIEVSDEMIDNQVKMYTQRTGKYDTVDTYQDNDMLKGLLAQLD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E + ++ S E I K D D + +L G +
Sbjct: 177 EEGNTKEGGIQVEGAVMMPSYMKNDEQKAIFANAKVNDVLVFNPNVAFDGNETEL-GSLL 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++ +I + ++ + E + + +E R K+K +I
Sbjct: 236 KIDKNIAKDVKSNFSFQVEEITRFVAGELNQELFDQAFGEGVVKTEEEFRAKIKEEIAAR 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + + + + N + EE + + + +
Sbjct: 296 FVADSDYKFLIDVRKMMMEKVGKLEFPDALLKRIMLLNNEEKGEEYVAENYDKSIEELTW 355
Query: 361 GIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + E N+I+V +E++ + Q ++ +LD++ K +
Sbjct: 356 HLIKEQLVEANDIKVEQEDVLKVAKDTTKAQFAQYGMLSVPDDVLDNYVQEMLKKKETVN 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L + + E K+ + V + ++ V+ ++
Sbjct: 416 NLVSRVVEVKLAAALKAQVTLENKSVSIEEFNK 448
>gi|212690528|ref|ZP_03298656.1| hypothetical protein BACDOR_00010 [Bacteroides dorei DSM 17855]
gi|237708015|ref|ZP_04538496.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
9_1_42FAA]
gi|265754198|ref|ZP_06089387.1| trigger factor tig [Bacteroides sp. 3_1_33FAA]
gi|212666877|gb|EEB27449.1| hypothetical protein BACDOR_00010 [Bacteroides dorei DSM 17855]
gi|229458001|gb|EEO63722.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
9_1_42FAA]
gi|263234907|gb|EEZ20462.1| trigger factor tig [Bacteroides sp. 3_1_33FAA]
Length = 451
Score = 137 bits (343), Expect = 5e-30, Method: Composition-based stats.
Identities = 69/464 (14%), Positives = 158/464 (34%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L + + + ++ R KANI GFRPG VP+S IK +GK
Sbjct: 1 MNISLQNVDKVSALLTLKLEKADYQARVEKTLKTYRQKANIPGFRPGMVPMSLIKKQFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L E +D++++E V E + P + + D + +
Sbjct: 61 SVLVEEVDKMMQEKVNEYIRDNKVNMLGMPLPNEEKM----APIDFDTQEDFEFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + EV ++ ID+Q+ + ++ E + + +
Sbjct: 117 APEFTAEISSADTIDYYTIEVSDELIDQQVKMYTQRAAKYDKVEQYEDKDMIKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG-----------DQKEIERFFPED 229
+ E + ++ + E I G K D E E
Sbjct: 177 ENGNTKEGGIQVEGAVMMPAYMKNDEQKAIFNGAKVNDVLVFNPAVAFDNNEAELSSLLK 236
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+++AG K +F I+E+ +P +N +L + E + KIK+
Sbjct: 237 IKKEEVAGVKGNFSFQIEEITRMVPAELNQELFDNVFGEGAVSSEEEFRAKIKEGIAKQF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + + + + + + E E +
Sbjct: 297 ESDSDYKFLIDVREYLVNKIGKLEFPDALLKRIMLLNNEEKG------------EAFVAE 344
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPG--HEKKMLDHF- 402
+ + + ++ + + N+I+V + ++ + + Q ++ + +L+++
Sbjct: 345 NYDKSIEELTWHLIKEQLLKNNDIKVEQADVMNMAKEATRIQFAQYGMLNIPEDVLENYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K ++ L E K+ + + + V+ ++
Sbjct: 405 KEMLKKQESVEGLVNRAAESKLSAALKAKATLNHKTVSMEEFNK 448
>gi|218262315|ref|ZP_03476829.1| hypothetical protein PRABACTJOHN_02503 [Parabacteroides johnsonii
DSM 18315]
gi|218223466|gb|EEC96116.1| hypothetical protein PRABACTJOHN_02503 [Parabacteroides johnsonii
DSM 18315]
Length = 451
Score = 137 bits (343), Expect = 5e-30, Method: Composition-based stats.
Identities = 56/457 (12%), Positives = 150/457 (32%), Gaps = 16/457 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K + K + + I D + + R KA++ GFR G VP+ +K +YGK
Sbjct: 1 MNVSLKNIDATKGIVKLEIVKADYADKVEKSLRSFRQKADVPGFRKGMVPMGMVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E I++++ E + + + P E + D + +
Sbjct: 61 HVLVEEINKLVSENLYNYIRENKLNILGEPLPNETEQ----KEINFDTQEDFEFCFDVAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I+I + ++ +D++ I +Q+ N A++ E E +
Sbjct: 117 APEIKIELSKNDKLPYFQVNIDDEMIGKQVEAYQANFGAYDQVEDVEEKDLVKGTVAELE 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + + +G K + + ++A
Sbjct: 177 NGSPKEGGIVVEEAVL-MPMYMKDEAEKAKFIGAKKNSVIVFNPNKAYEGAEAEIASFLK 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++ + + + ++ + + + E + + +
Sbjct: 236 VDKDAVSGITGDFSFEITEVTRHKNAELNQELFDKVFGEGVVTSEEEFKNKIREALAEQF 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ ++ ++ N + E+ + Y + + +
Sbjct: 296 TPQSDFKFLVDARDLLVQKAGELSFAEDLLKRWLLVANEKNTKEKIDEEYPRIIED-LKY 354
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + ++N ++V + +++ + Q ++ + +L ++ K L
Sbjct: 355 QLIKENLVKENGLKVEDADIEDFAKRVAKAQFAQYGMLSVPEDVLANYAKDILKNKQTLQ 414
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ E+K+ + + V++ ++VT D+ E
Sbjct: 415 NIIDRAVEEKLAGWLKEQVELDTKEVTVDEFNKLFEE 451
>gi|219114238|ref|XP_002176290.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402693|gb|EEC42682.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 646
Score = 137 bits (343), Expect = 6e-30, Method: Composition-based stats.
Identities = 67/498 (13%), Positives = 168/498 (33%), Gaps = 45/498 (9%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPG-KVPLSHIKSLYGK--- 60
K EL + +P+ ++++ ++ I GFR G ++P ++
Sbjct: 52 VKRLPDSAVELAIPVPAAATQAAYDKVCRELARTVQIPGFRKGSRIPPPVLEQALAAKGG 111
Query: 61 --SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
++ ++ I+E++ +V L + + +P++ + ++ + E + L +
Sbjct: 112 RNALKTQAINELVGTLVEPALKDANLQPIGQPTLLVP---AEELANDFEAGKSVTLTVRC 168
Query: 119 DILPQIEI------------SSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETE 166
D+ P +E + L + ++ ++D + ++ +
Sbjct: 169 DVWPDVEWKRDPDRADDPDAKPYLGLTGSYRRKPFNQPKLDLALNDLRERYATLVPITDA 228
Query: 167 S----------EIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKT 216
+ S V+ I+G+ E LVG K
Sbjct: 229 EYRLQMGDACTVNMVGYLATPQGDKGEPLPNAASGDRVEVILGTGRYMEGLVEGLVGAKV 288
Query: 217 GDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRG 275
G+ K ++ FPE K LAGK+ + + E V ++ AV++ + +
Sbjct: 289 GETKAVQVNFPEKLRDKSLAGKRAIFDVEVLEASERQVPEVTDEFAVQVKAGLTADTLLA 348
Query: 276 LCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK 335
+ I + + +++ VP++LV N+ + EM +
Sbjct: 349 ELRKAIDAEDAKEFTPARNKALGQALADVMDMQVPDTLVSNQAREKFAVMMSEMRDSGVS 408
Query: 336 SQNV-----DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGR 390
+ + + + + I IG N++V + +++ +
Sbjct: 409 DEEIKRQINPENFAKYKEIVKDDIIKDFKVSIAADEIGRLENVQVPDYQVEEQMEAIRKD 468
Query: 391 FPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSV--QIVDRKVTFDQ-LFDNSSE 447
++++ + ++ A + V D + + Q+ FD+ L + ++
Sbjct: 469 AAESKQELDE-----NMIRGKVEATLQRQAVFDWLAERSQLQVEFEDDYFDEALMEKLAK 523
Query: 448 SSPEKLLDKSSKVETFQS 465
S E+ ++
Sbjct: 524 ESLEREEQIAAGKAATPE 541
>gi|300915525|ref|ZP_07132836.1| trigger factor [Thermoanaerobacter sp. X561]
gi|300888423|gb|EFK83574.1| trigger factor [Thermoanaerobacter sp. X561]
Length = 237
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 53/245 (21%), Positives = 106/245 (43%), Gaps = 11/245 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K E +++ IPS + + N + SK N+ GFR GK P ++ YG+
Sbjct: 1 MGVSLKKLEKSVATIELTIPSEKFEEGLNFAFKKNASKFNVPGFRRGKAPRVIVERYYGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ + E E L + P I I + I DL L +
Sbjct: 61 GVLYEDAVEYVFDEAYKEALKTFNLEPVDYPDINILQ---------IGKGKDLILEATVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYT 178
++P++E+ + +++ + V + +++ ++ ++ + N E +E GD +D+
Sbjct: 112 VMPEVELGEYKGIEIEKIEYNVYDGDVEYELEKLRQQNARIVPVEGRPAESGDIAVIDFE 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D E +N + +GS + ++G + ++ FPED+ +++L GK
Sbjct: 172 GFIDGKPFEGGKAENYELELGSNTFIPGFEDQIIGHNVNETFDVNITFPEDYRVEELRGK 231
Query: 239 KVRLN 243
Sbjct: 232 SAVFK 236
>gi|326334772|ref|ZP_08200978.1| peptidyl-prolyl cis-trans isomerase [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325693085|gb|EGD35018.1| peptidyl-prolyl cis-trans isomerase [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 443
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 55/454 (12%), Positives = 158/454 (34%), Gaps = 29/454 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + L + ++I N + ++ + + R A++ GFR G +P+ +K YG+
Sbjct: 1 MNISKEQIDALNGVITLVIDKNDYQKNVDDALNNYRKNASVPGFRKGHLPMGIVKKQYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + ++++I + + + + + +P + + D +
Sbjct: 61 AIQVDEVNKLISDSLNKFIQDEKLQLLGQPIPKEDAPQVDW------DGDSHTFVFEIGL 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ I + +V +KEI+ Q+ + E ++
Sbjct: 115 APEFSIDLST--PINYYEIKVTDKEIETQVEHLRTRFGTLVPAEKVAKNT---------E 163
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + + + ++ + L + E L K GD +I E + + +
Sbjct: 164 ISGTFFNEAANIDKEYTFTTESLTDKAFEKLKDKKVGD--QITLSSKELFKDTHVLMQAL 221
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ + + ++ + + A +E R+KV+ I +
Sbjct: 222 GVPHEVVHTLDVELTLTIENIQEVVLATLDEAFFNQLYPNQNITTEEEFRKKVEEGIREE 281
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + E + E + + I E++ + ++R +
Sbjct: 282 FTTNADSRLLDDATEVLLEKTSFDLPAEFLKKWIQVTSEKKITAEEVAEEYNRSERGLRY 341
Query: 361 GIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFP----GHEK--KMLDHFQKYPNALA 410
++ I + N+++V+ E+++ + Q+ R+ + +++ K +
Sbjct: 342 QLIEDKILKDNHLQVSYPEIRAFAERAIRAQIARYGLTDVEQPQIDTFVNNTLKNEAEVN 401
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ + K+I + ++ + D +
Sbjct: 402 RIHRELVGGKLIQFYKEKAKLNKIDIDVDSFIEK 435
>gi|323164237|gb|EFZ50044.1| trigger factor [Shigella sonnei 53G]
Length = 301
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 60/308 (19%), Positives = 143/308 (46%), Gaps = 9/308 (2%)
Query: 141 VDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGS 200
+ + ++D + + K ++ K+ E D+VT+D+T SVD E + +G
Sbjct: 1 MTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQ 60
Query: 201 ADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNND 260
+ + + G K G++ I+ FPE++ ++L GK + ++K+V + +
Sbjct: 61 GRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAE 120
Query: 261 LAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEY 318
R G E +R + +++ + +R +VK Q ++ + DVP +L+++E
Sbjct: 121 FIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEI 180
Query: 319 NGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEE 378
+ + ++ N E + + AKRRV+ G++LG + N ++ EE
Sbjct: 181 DVLRRQAAQRFGG------NEKRALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEE 234
Query: 379 EMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTF 438
++ + + + K++++ + K + +R E++ ++ +L ++ +++ TF
Sbjct: 235 RVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEKETTF 293
Query: 439 DQLFDNSS 446
++L + +
Sbjct: 294 NELMNQQA 301
>gi|295088059|emb|CBK69582.1| trigger factor [Bacteroides xylanisolvens XB1A]
Length = 451
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 69/464 (14%), Positives = 156/464 (33%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + EL V + + ++ ++ +R KA I GFR G VP S IK +YGK
Sbjct: 1 MNVSLQNIDKVSAELTVKLEKADYQEKVDKELKSLRQKAQIPGFRKGMVPTSLIKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E +++ ++E V + P + + + + + +
Sbjct: 61 SVIAEVVNKALQEAVYNYIKDNKVNMLGEPLPNEEKQQ----NIDFDTMEEFDFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV E+ ID Q+ + ++ + + + +
Sbjct: 117 APEFKAEVSAKDKVDYYSIEVSEEMIDNQVKMYTQRTGKYDKVDAYEDNDMLKGLLAQLD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD------ 234
+ E + ++ + + I K D D +
Sbjct: 177 EEGNTKEGGIQVEAAVLMPAYMKNDDQKAIFANAKVNDVLVFNPSVAYDGHAAELGSLLK 236
Query: 235 -----LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
K +F ++E+ +P + ++ + E KIK+
Sbjct: 237 IDKEIAKDVKSDFSFQVEEITRFVPGELTQEVFDQAFGEGVVKTEEEFRAKIKEEIAARF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L I V + + + + E ++N D EE
Sbjct: 297 VADSDYKFLIDIRKVMMEKVGKLEFSDALLKRIMLLNNEEKGEEYVAENYDKSIEEL--- 353
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPG--HEKKMLDHF- 402
++ + E N+I+V +E++ + Q ++ +LD++
Sbjct: 354 ---------TWHLIKEQLVEANDIKVEQEDVLKMARETTKAQFAQYGMLSIPDDVLDNYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K + L + + E K+ + V + ++ V+ ++
Sbjct: 405 QEMLKKKETINNLVSRVVEVKLAAALKAQVTLENKNVSIEEFNK 448
>gi|297180737|gb|ADI16945.1| fkbP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[uncultured SAR406 cluster bacterium HF0010_18O13]
Length = 428
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 69/449 (15%), Positives = 167/449 (37%), Gaps = 30/449 (6%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+V K EL + + FN + + + + GFR GKVP + + S Y S
Sbjct: 4 KVNSKKINDFTYELAISAKWEDIKADFNIAKKKVAKEIKLPGFRKGKVPENILMSQYINS 63
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + + ++ L K + + + DL + ++I
Sbjct: 64 VEMGFVQDFCEKYYIMALQKEELTPINQAQL---------KDIDFSYENDLSFKSEFEIE 114
Query: 122 PQIEISSFDD--LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P +++ F + V + +++E+D+ + I + E E S GD + VD
Sbjct: 115 PSLKLPKFKKNMVTVEKINFISNQEEVDKTIENILNSQAKAEQIEKGSMNGDFLIVDKQE 174
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
++ + K+ +G + E E + GD+ ++ E +
Sbjct: 175 LDESGLPIIGKKEKKYLAIGQDPIIEEKAESFISKNAGDKVKLTIDMGEG---------E 225
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
F+I+ + +P ++++ + +S + + I + + +
Sbjct: 226 KNYEFTIEAIQRRVPPKLDDEFVKQIDPNCKSIDEWKKNVHESIDNEYKRKSDEMFHSSL 285
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D +P S++EN N I+ +V+ ++ N + + + + Y A+
Sbjct: 286 IDQFVKLVNPVLPTSMLENYLNNIVNEVKQNQNNQN-------TDEVQIREQYQQFAENN 338
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ ++ +I + V+ E++ + L + + + ++ F K + +L +
Sbjct: 339 LRWFLLRKSIISHKELSVSPTEVEDFIKDALKKNESQKAE-IERFYKKESNKNKLSDDLL 397
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ K+ID + + +I ++ +L
Sbjct: 398 DQKIIDMLKEHSKIKEKDQKTSELKGAQP 426
>gi|323153473|gb|EFZ39727.1| trigger factor [Escherichia coli EPECa14]
gi|332763734|gb|EGJ93972.1| trigger factor [Shigella flexneri K-671]
gi|333021862|gb|EGK41110.1| trigger factor [Shigella flexneri K-304]
Length = 301
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 60/308 (19%), Positives = 143/308 (46%), Gaps = 9/308 (2%)
Query: 141 VDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGS 200
+ + ++D + + K ++ K+ E D+VT+D+T SVD E + +G
Sbjct: 1 MTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQ 60
Query: 201 ADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNND 260
+ + + G K G++ I+ FPE++ ++L GK + ++K+V + +
Sbjct: 61 GRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAE 120
Query: 261 LAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEY 318
R G E +R + +++ + +R +VK Q ++ + DVP +L+++E
Sbjct: 121 FIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEI 180
Query: 319 NGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEE 378
+ + ++ N E + + AKRRV+ G++LG + N ++ EE
Sbjct: 181 DVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEE 234
Query: 379 EMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTF 438
++ + + + K++++ + K + +R E++ ++ +L ++ +++ TF
Sbjct: 235 RVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEKETTF 293
Query: 439 DQLFDNSS 446
++L + +
Sbjct: 294 NELMNQQA 301
>gi|218128446|ref|ZP_03457250.1| hypothetical protein BACEGG_00014 [Bacteroides eggerthii DSM 20697]
gi|317475728|ref|ZP_07934987.1| trigger factor [Bacteroides eggerthii 1_2_48FAA]
gi|217989337|gb|EEC55650.1| hypothetical protein BACEGG_00014 [Bacteroides eggerthii DSM 20697]
gi|316908111|gb|EFV29806.1| trigger factor [Bacteroides eggerthii 1_2_48FAA]
Length = 451
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 60/464 (12%), Positives = 172/464 (37%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + + ++ ++++R KA I GFR G VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQEKVDKSLKNLRQKAQIPGFRKGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L+E +++++ + V + + P ++ + + + +
Sbjct: 61 SVLAEEVNKLLSDSVYKYIQDNKVSILGEPLPNEDKQ----KDIDFDTMEEFEFLFDVAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + D +V +V E+ ++ Q+ + + +E + ++ + +
Sbjct: 117 APEFKAEVSADDKVDYYTIDVTEEMVNNQVKAYTQRSGKYEKVDAYADNDMLKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD------ 234
+ E + ++ + E I K D + D + +
Sbjct: 177 AEGNTKEGGIQVEGAVMMPAYMKNDEQKAIFANAKVNDVLVFNPYTAWDGNAAELASLLK 236
Query: 235 -----LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+A K +F ++E+ + +N ++ ++ + K+K+
Sbjct: 237 IDKEAVAEMKSNFSFQVEEITRFVEGELNQEIFDQVFGKDVVKSEEEFRAKVKEVIANQF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + V + + + ++ + DE+ ++
Sbjct: 297 VADGDYKFLLDVRKMLMEKVGKLEFPDALLKRIMRLNNQDK------------DEKFVED 344
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGH--EKKMLDHF- 402
+ + + ++ + + N+I+V ++++ + A Q ++ +++LD++
Sbjct: 345 NYDKSIEELTWHLIKEQLVKANDIKVEQDDILNMAKEATRAQFAQYGMLSVPEEILDNYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K ++ L + E K+ + V++ ++ ++ +
Sbjct: 405 KEMLKKKESIEGLVNRVVETKLASALKTQVKLENKNISAEDFNK 448
>gi|293369497|ref|ZP_06616076.1| trigger factor [Bacteroides ovatus SD CMC 3f]
gi|292635382|gb|EFF53895.1| trigger factor [Bacteroides ovatus SD CMC 3f]
Length = 451
Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats.
Identities = 69/464 (14%), Positives = 156/464 (33%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + EL V + + ++ ++ +R KA I GFR G VP S IK +YGK
Sbjct: 1 MNVSLQNIDKVSAELTVKLEKADYQEKVDKELKSLRQKAQIPGFRKGMVPTSLIKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E +++ ++E V + P + + + + + +
Sbjct: 61 SVIAEVVNKALQEAVYNYIKDNKVNMLGEPLPNEEKQQ----NIDFDTMEEFDFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV E+ ID Q+ + ++ + + + +
Sbjct: 117 APEFKAEVSAKDKVDYYSIEVSEEMIDNQVKMYTQRTGKYDKVDAYEDNDMLKGLLAQLD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD------ 234
+ E + ++ + + I K D D +
Sbjct: 177 EEGNTKEGGIQVEAAVLMPAYMKNDDQKAIFANAKVNDVLVFNPNVAYDGHAAELGSLLK 236
Query: 235 -----LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
K +F ++E+ +P + ++ + E KIK+
Sbjct: 237 IDKEIAKDVKSDFSFQVEEITRFVPGELTQEVFDQAFGEGVVKTEEEFRAKIKEEIAARF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L I V + + + + E ++N D EE
Sbjct: 297 VADSDYKFLIDIRKVMMEKVGKLEFSDALLKRIMLLNNEEKGEEYVAENYDKSIEEL--- 353
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPG--HEKKMLDHF- 402
++ + E N+I+V +E++ + Q ++ +LD++
Sbjct: 354 ---------TWHLIKEQLVEANDIKVEQEDVLKMARETTKAQFAQYGMLSIPDDVLDNYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K + L + + E K+ + V + ++ V+ ++
Sbjct: 405 QEMLKKKETINNLVSRVVEVKLAAALKAQVTLENKNVSIEEFNK 448
>gi|329957344|ref|ZP_08297864.1| trigger factor [Bacteroides clarus YIT 12056]
gi|328523057|gb|EGF50160.1| trigger factor [Bacteroides clarus YIT 12056]
Length = 451
Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats.
Identities = 61/464 (13%), Positives = 171/464 (36%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + + ++ +++ R KA I GFR G VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQEKVDKSLKNFRQKAQIPGFRKGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L+E +++++ + V + + P ++ + + + + +
Sbjct: 61 SVLAEEVNKLLSDSVYKYIQDNKVNMLGEPLPNEDKQ----KAIDFDTMEEFEFLFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V +V E+ +D Q+ + N +E + ++ + +
Sbjct: 117 SPEFKAEVAAADKVDYYTIDVTEEMVDNQVKAYTQRNGKYEKMDAYADNDMLKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD------ 234
+ E + ++ + + I K D + D + +
Sbjct: 177 AEGNTKEGGIQVEGAVMMPAYMKNDDQKAIFANAKVNDVLVFNPYAAWDGNAAELSSLLK 236
Query: 235 -----LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+A K +F ++E+ + +N ++ ++ E K+K+
Sbjct: 237 IDKEAVAEMKSDFSFQVEEITRFVAGELNQEIFDQVFGEGVVKTEEEFRAKVKEVIANQF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + V + + + ++ + DE+ ++
Sbjct: 297 AADSDYKFLLDVRKMLMEKVGKLEFPDALLKRIMRLNNQDK------------DEKFVED 344
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGH--EKKMLDHF- 402
+ + + ++ + + N+I+V ++++ + A Q ++ +++LD++
Sbjct: 345 NYDKSIEELTWHLIKEQLVKANDIKVEQDDILNMAKEATRAQFAQYGMLSVPEEILDNYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K ++ L + E K+ + V + ++ ++ ++
Sbjct: 405 KEMLKKKESIEGLVNRVVETKLASALKTQVTLENKNISAEEFNK 448
>gi|329962627|ref|ZP_08300575.1| trigger factor [Bacteroides fluxus YIT 12057]
gi|328529658|gb|EGF56556.1| trigger factor [Bacteroides fluxus YIT 12057]
Length = 451
Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats.
Identities = 62/453 (13%), Positives = 156/453 (34%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + + ++ ++ R KA I GFR G VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQEKVDKSLKSFRQKAQIPGFRKGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E +++++ E V + P ++ + + + +
Sbjct: 61 SVVAEEVNKLLSESVYNYIQDNKINMLGEPLPNEDKQP----EIDFDTMEEFEFLFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + D +V EV + ++ Q+ + ++ + + + +
Sbjct: 117 APEFKAEVSADDKVAYYTIEVTDDMVENQVKAYTQRTGKYDKVDVYEDNDMLKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E + ++ S E + G K D D + +LA +
Sbjct: 177 EEGNTKEGGIQVEGAVMMPSYMKNDEQKAVFNGAKVNDVLVFNPSTAWDGNAAELA-SLL 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++ E ++ + E + + SE R K+K I
Sbjct: 236 KIEKEAAEQMKSNFSFQVEEVTRFVAGELNQEIFDQVFGEGAVKSEEEFRAKIKENIAAQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + + + N DE+ + + + +
Sbjct: 296 FVVDSDYKFLIDTRKVMMEKVGKLEFPDALLKRIMRLNNPDKDEKFVDDNYDKSIEELTW 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + + N+I+V +E++ + + Q ++ +L+++ K ++
Sbjct: 356 HLIKEQLVKANDIKVEQEDVTNMAKEATRAQFAQYGMMSIPDDILENYAKEMLKKKESVE 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L E K+ + V + ++ V+ ++
Sbjct: 416 GLVNRAVETKLAAALKPQVTLENKNVSLEEFNK 448
>gi|150003038|ref|YP_001297782.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides vulgatus
ATCC 8482]
gi|254883676|ref|ZP_05256386.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
4_3_47FAA]
gi|294775662|ref|ZP_06741170.1| trigger factor [Bacteroides vulgatus PC510]
gi|319642187|ref|ZP_07996847.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
3_1_40A]
gi|149931462|gb|ABR38160.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides vulgatus
ATCC 8482]
gi|254836469|gb|EET16778.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
4_3_47FAA]
gi|294450506|gb|EFG18998.1| trigger factor [Bacteroides vulgatus PC510]
gi|317386173|gb|EFV67092.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
3_1_40A]
Length = 451
Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats.
Identities = 68/464 (14%), Positives = 158/464 (34%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L + + + ++ R KANI GFRPG VP+S IK +GK
Sbjct: 1 MNISLQNVDKVSALLTLKLEKADYQARVEKTLKTYRQKANIPGFRPGMVPMSLIKKQFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L E +D++++E V E + P + + D + +
Sbjct: 61 SVLVEEVDKMMQEKVNEYIRDNKVNMLGMPLPNEEKM----KPIDFDTQEDFEFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ V EV ++ I++Q+ + ++ E + + +
Sbjct: 117 APEFTAEISAADTVDYYTIEVSDELIEQQVKMYTQRAAKYDKVEQYEDKDMIKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG-----------DQKEIERFFPED 229
+ E + ++ + E I G K D E E
Sbjct: 177 ENGNTKEGGIQVEGAVMMPAYMKNDEQKAIFNGAKVNDVLVFNPAVAFDNNEAELSSLLK 236
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+++AG K +F ++E+ +P +N +L + E + KIK+
Sbjct: 237 IKKEEVAGVKGNFSFQVEEITRMVPAELNQELFDNVFGEGTVSSEEEFRAKIKEGIAKQF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + + + + + + E E +
Sbjct: 297 ESDSDYKFLIDVREYLVNKIGKLEFPDALLKRIMLLNNEEKG------------EAFVAE 344
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPG--HEKKMLDHF- 402
+ + + ++ + + N I+V + ++ + + Q ++ +++L+++
Sbjct: 345 NYDKSIEELTWHLIKEQLLKNNEIKVEQADVMNMAKEATRIQFAQYGMLNIPEEVLENYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K ++ L E K+ + + + V+ ++
Sbjct: 405 KEMLKKQESVEGLVNRAAESKLSAALKAKATLNHKTVSMEEFNK 448
>gi|21672723|ref|NP_660790.1| trigger factor [Buchnera aphidicola str. Sg (Schizaphis graminum)]
gi|25009469|sp|Q8K991|TIG_BUCAP RecName: Full=Trigger factor; Short=TF
gi|21623367|gb|AAM68001.1| trigger factor (TF) [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 442
Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats.
Identities = 78/453 (17%), Positives = 189/453 (41%), Gaps = 16/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + ++ + + IP +++ +I K I GFR GK P+ I+ YG
Sbjct: 1 MKFFIEKNKKNTDRVTINIPKKIVSNELIREFIEINKKTKINGFRKGKTPIKIIQEKYGN 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + ++++++ E + K + P ++E E + K ++Y++
Sbjct: 61 RVYYDVFNQLMQKFFYEFIKKEKIKIIGLPKYVMHENE--------DQKEYFKYSVNYEV 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-FEVKETESEIGDKVTVDYTV 179
P+ EI + ++V + I + ++++ + + + A + + D VT++Y +
Sbjct: 113 YPKFEIKDVNLIKVEKIIVNIKDEDVKKNIEKTASYEKDIWNKVNRAIKTNDLVTINYCI 172
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+N L+ + + +FIV + E L+ T D + F + H ++L GK
Sbjct: 173 YENNKKLDKFNVEKFKFIVSQNNFIPELNNKLINHFTNDVIFFKINFCKFHPEEELQGKD 232
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAM-RGLCSQKIKQHSEFLVRQKVKRQIL 298
+ I V + + S + I + + L + ++ QI+
Sbjct: 233 ITFKIKILNVEEKQENIEIEKNIKTIKINKLSKLNYQTIKNNIIEKIKSLTQNHLQNQII 292
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ K ++P +L+ E N + K E + + ++ AK R+
Sbjct: 293 KQLIIKNPINIPPTLLREETNFLRNKFIKEYKEKQ-----ENILKKKYHTNLESKAKTRL 347
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+++ I N I V EE++ + + ++ ++++ ++K ++ E
Sbjct: 348 HIKLIIEKIIRDNKISVNEEKVDLLIKKISLKYKK-PLEIINIYKKNTMLRKTIKNIELE 406
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
+V+ ++K V+I+++ T D++ + + +++ E
Sbjct: 407 MQVMQFLIKKVKIIEKNWTLDEIMNYNWKNNEE 439
>gi|224535960|ref|ZP_03676499.1| hypothetical protein BACCELL_00824 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522415|gb|EEF91520.1| hypothetical protein BACCELL_00824 [Bacteroides cellulosilyticus
DSM 14838]
Length = 451
Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats.
Identities = 60/464 (12%), Positives = 165/464 (35%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + + ++ ++ +R KA + GFRPG VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQEKVDKSLKKLRQKAQVPGFRPGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E +++ + E V + + + P ++ + + + +
Sbjct: 61 SVIAEEVNKALSEAVYKYIQDNNVSILGEPLPNEDKQP----DIDFDTMEEFEFLFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V + +V E ++ Q+ + N +E + + + +
Sbjct: 117 APEFKAEVSTKDKVDYYLIDVTEDMVNNQVKAYTQRNGKYEQVDVYEDNDMLKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG-----------DQKEIERFFPED 229
+ E + ++ S E I K D E
Sbjct: 177 ENGNTKEGGIQVEAAVMMPSYMKNDEQKAIFANAKVNDVLVFNPYTAWDGNATELSSLLK 236
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
++ A K ++ ++EV + + ++ ++ + K+K+
Sbjct: 237 IDKEEAAEMKSNFSYQVEEVTRFVAGELTQEIFDQVCGKDVVKTEEEFRAKVKEVIANQF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L V + + + ++ + DE+ ++
Sbjct: 297 VADTDYKFLIDARKMLMEKVGKLEFPDALLKRIMRMNNQDK------------DEKFVED 344
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGH--EKKMLDHF- 402
+ + + ++ + + N+I+V +E++ + A Q ++ + +L+++
Sbjct: 345 NYDKSIEELTWHLIKEQLVKANDIKVEQEDVVNMAKEATRAQFAQYGMMSVPEDLLENYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K ++ L + E K+ + V + ++ ++ ++
Sbjct: 405 KEMLKKKESVEGLVNRVVETKLASALKSQVTLENKTISAEEFNK 448
>gi|237712738|ref|ZP_04543219.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp. D1]
gi|262408125|ref|ZP_06084672.1| trigger factor protein [Bacteroides sp. 2_1_22]
gi|294645127|ref|ZP_06722852.1| trigger factor [Bacteroides ovatus SD CC 2a]
gi|294809721|ref|ZP_06768408.1| trigger factor [Bacteroides xylanisolvens SD CC 1b]
gi|229447215|gb|EEO53006.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp. D1]
gi|262353677|gb|EEZ02770.1| trigger factor protein [Bacteroides sp. 2_1_22]
gi|292639551|gb|EFF57844.1| trigger factor [Bacteroides ovatus SD CC 2a]
gi|294443055|gb|EFG11835.1| trigger factor [Bacteroides xylanisolvens SD CC 1b]
Length = 451
Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats.
Identities = 69/464 (14%), Positives = 156/464 (33%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + EL V + + ++ ++ +R KA I GFR G VP S IK +YGK
Sbjct: 1 MNVSLQNIDKVSAELTVKLEKADYQEKVDKELKSLRQKAQIPGFRKGMVPTSLIKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E +++ ++E V + P + + + + + +
Sbjct: 61 SVIAEVVNKALQEAVYNYIKDNKVNMLGEPLPNEEKQQ----NIDFDTMEEFDFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV E+ ID Q+ + ++ + + + +
Sbjct: 117 APEFKAEVSAKDKVDYYSIEVSEEMIDNQVKMYTQRTGKYDKVDAYEDNDMLKGLLAQLD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD------ 234
+ E + ++ + + I K D D +
Sbjct: 177 EEGNTKEGGIQVEAAVLMPAYMKNDDQKAIFANAKVNDVLVFNPNVAYDGHAAELGSLLK 236
Query: 235 -----LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
K +F ++E+ +P + ++ + E KIK+
Sbjct: 237 IDKEIAKDVKSNFSFQVEEITRFVPGELTQEVFDQAFGEGVVKTEEEFRAKIKEEIAARF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L I V + + + + E ++N D EE
Sbjct: 297 VADSDYKFLIDIRKVMMEKVGKLEFSDALLKRIMLLNNEEKGEEYVAENYDKSIEEL--- 353
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPG--HEKKMLDHF- 402
++ + E N+I+V +E++ + Q ++ +LD++
Sbjct: 354 ---------TWHLIKEQLVEANDIKVEQEDVLKMARETTKAQFAQYGMLSIPDDVLDNYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K + L + + E K+ + V + ++ V+ ++
Sbjct: 405 QEMLKKKETINNLVSRVVEVKLAAALKAQVTLENKNVSIEEFNK 448
>gi|154494360|ref|ZP_02033680.1| hypothetical protein PARMER_03715 [Parabacteroides merdae ATCC
43184]
gi|154085804|gb|EDN84849.1| hypothetical protein PARMER_03715 [Parabacteroides merdae ATCC
43184]
Length = 451
Score = 136 bits (341), Expect = 9e-30, Method: Composition-based stats.
Identities = 56/457 (12%), Positives = 148/457 (32%), Gaps = 16/457 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K + K + + I D + + R KA + GFR G VP+ +K +YGK
Sbjct: 1 MNVSLKNIDATKGIVKLEIVKADYADKVEKSLRSFRQKAEMPGFRKGMVPMGMVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E I++++ E + + + P E + D + +
Sbjct: 61 HVLVEEINKLVSENLYNYIRENKLNILGEPLPNETEQ----KEINFDTQEDFEFCFDVAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I+I + +V +D++ I +Q+ N ++ E E +
Sbjct: 117 APEIKIELSKNDKVPYYQVNIDDEMIGKQVEAYQANFGTYDQVEDVEEKDLVKGTVAELE 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + + +G K + + ++A
Sbjct: 177 NGSPKEGGIVVEEAVL-MPMYIKDEAEKAKFIGAKKNSVIVFNPNKAYEGAEAEIASFLK 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++ + + + ++ + + + E + + +
Sbjct: 236 VNKEAVSGITGDFSFEITEVTRHKNAELNQELFDKVFGEGVVTSEEEFKNKIREALAEQF 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ ++ ++ N + E+ + Y + + +
Sbjct: 296 TPQSDFKFLVDARDLLVQKAGELSFAEDLLKRWLLVANEKNTKEKIDEEYPRIIED-LKY 354
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + ++N ++V + +++ + Q ++ + +L ++ K L
Sbjct: 355 QLIKENLVKENGLKVEDADIEGFAKRVAKAQFAQYGMLSVPEDVLANYAKDILKNKQTLQ 414
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ E+K+ + + V++ ++VT D+ E
Sbjct: 415 NIIDRAVEEKLAGWLKEQVELDTKEVTADEFNKLFEE 451
>gi|163781839|ref|ZP_02176839.1| trigger factor [Hydrogenivirga sp. 128-5-R1-1]
gi|159883059|gb|EDP76563.1| trigger factor [Hydrogenivirga sp. 128-5-R1-1]
Length = 466
Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats.
Identities = 81/437 (18%), Positives = 187/437 (42%), Gaps = 15/437 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + EGL + L V + + + NE E+++ I+GFR G PL IK+ Y
Sbjct: 1 MKVKTEEREGLFKALTVEVEGDVVQSLLNEVYENLKQNVEIQGFRKGTAPLWLIKAKYKD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E ++ + + E + + + E E E T + ++++
Sbjct: 61 YVEEEVGKKVANQTLEEAIKESSLTPVADVYLEKVELE--------EKTPKVTYTVTFET 112
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ + L+V E ++ +++++ ++ + + +E E +
Sbjct: 113 PPEFELKDIEGLEVEVPKLEFKDELVEKRIEQLREEHAVWEPVEDRPVKEGDLVTIEYEV 172
Query: 181 VDNVILEDQSKKNVQF--IVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ E+ K + ++G E + LVG K ++ E++ D K++
Sbjct: 173 EEIKEGEEGEKVTGETSGVIGQKMFREELEQALVGKKVDEEVELKELPLYDQEGKEIG-- 230
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
K + IK+V + +N+D A LG+ES + +++K+ E + ++ +
Sbjct: 231 KANIKAKIKDVKEKVLPELNDDFAKELGYESWEEAKKKIEEQVKEEFERGKQALIEDAVA 290
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
D + + D+P++L+ E + ++++ E+ ++ +D Q + A+ +
Sbjct: 291 DKLIEMHEIDIPQTLLNRELSFLIERRVNELKQFGIDTRYLDYRT--MAQEFLPQAQANI 348
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+L E+ IE TEE+++ + + ++++ D+F + N + +R+
Sbjct: 349 KLRYILDRYAEEKGIEATEEDIEEQFEELAKQMGTTKEEVKDYF-ERENLMEVVRSDARR 407
Query: 419 DKVIDHILKSVQIVDRK 435
K + I+ V I + +
Sbjct: 408 KKALKEIISKVNIKEVE 424
>gi|298480168|ref|ZP_06998366.1| trigger factor [Bacteroides sp. D22]
gi|298273449|gb|EFI15012.1| trigger factor [Bacteroides sp. D22]
Length = 451
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 69/464 (14%), Positives = 155/464 (33%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + EL V + + ++ ++ +R KA I GFR G VP S IK +YGK
Sbjct: 1 MNVSLQNIDKVSAELTVKLEKADYQEKVDKELKSLRQKAQIPGFRKGMVPTSLIKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E +++ ++E V + P + + + + + +
Sbjct: 61 SVIAEVVNKALQEAVYNYIKDNKVNMLGEPLPNEEKQQ----NIDFDTMEEFDFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV E+ ID Q+ + ++ + + + +
Sbjct: 117 APEFKAEVSAKDKVDYYSIEVSEEMIDNQVKMYTQRTGKYDKVDAYEDNDMLKGLLAQLD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD------ 234
+ E + ++ + + I K D D +
Sbjct: 177 EEGNTKEGGIQVEAAVLMPAYMKNDDQKAIFANAKVNDVLVFNPNVAYDGHAAELGSLLK 236
Query: 235 -----LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
K +F ++E+ +P + ++ + E KIK+
Sbjct: 237 IDKEIAKDVKSDFSFQVEEITRFVPGELTQEVFDQAFGEGVVKTEEEFRAKIKEEIAARF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L I V + + + + E ++N D EE
Sbjct: 297 VADSDYKFLIDIRKVMMEKVGKLEFSDALLKRIMLLNNEEKGEEYVAENYDKSIEEL--- 353
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPG--HEKKMLDHF- 402
++ + E N I+V +E++ + Q ++ +LD++
Sbjct: 354 ---------TWHLIKEQLVEANEIKVEQEDVLKMARETTKAQFAQYGMLSIPDDVLDNYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K + L + + E K+ + V + ++ V+ ++
Sbjct: 405 QEMLKKKETINNLVSRVVEVKLAAALKAQVTLENKNVSIEEFNK 448
>gi|78186160|ref|YP_374203.1| trigger factor [Chlorobium luteolum DSM 273]
gi|78166062|gb|ABB23160.1| trigger factor [Chlorobium luteolum DSM 273]
Length = 436
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 68/437 (15%), Positives = 166/437 (37%), Gaps = 23/437 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
Q K ++EL++I S+ + + + +E+ + +KGFR G P I+ L G +
Sbjct: 12 QKNIKNISETEQELEIIFTSDEFANDYEQELEEAKKTVQLKGFRKGHAPAGLIRKLAGPA 71
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I + +++ + +I+ + A R + + L +RL Y++
Sbjct: 72 IEASIAEKLASKHFGDIVESDKIKTASRAGMIDFTFTPE----------QLTVRLGYEVH 121
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P+ ++ F T+ + +D+ +++++ I K + + + D V D
Sbjct: 122 PEFDLKDFSSYSFTRSVYTIDDAAVEKEINLILKGHGTMVSVDEAATATDTVIGDVVKLT 181
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
+ + +N F + + + + G K G+ +E + V
Sbjct: 182 EEGEEGEGKTENHHFNLEYLPEDNPFGKAIAGKKAGETVVVETPGQNEGDA------PVN 235
Query: 242 LNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+I EV + ++L FE+ + + ++ +H + + I
Sbjct: 236 FRVTISEVKRMELPELTDELVKEITGQRFENVADFKADVKIQLDEHFSMKSEEDLLESIS 295
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++ P+++V + N +++ + +M + K+ + ++ A+R
Sbjct: 296 AKLIDENPVATPKTMVASFSNMLVENAKRQMGGSFPKAFDT----DQFQTAMQPNAERHA 351
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++ I E NN+E+ E ++ ++ + + L + + I +
Sbjct: 352 RWLVISQKIAEMNNLEIDEAAIREYAEKEAAKNTAMNAEELMKTYMSADFRDYVTDTITK 411
Query: 419 DKVIDHILKSVQIVDRK 435
+K+ + I V I D
Sbjct: 412 EKIYEIIKAKVSITDEA 428
>gi|237725287|ref|ZP_04555768.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp. D4]
gi|229436553|gb|EEO46630.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides dorei
5_1_36/D4]
Length = 451
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 67/464 (14%), Positives = 157/464 (33%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L + + + ++ R KANI GFRPG VP+S IK +GK
Sbjct: 1 MNISLQNVDKVSALLTLKLEKADYQARVEKTLKTYRQKANIPGFRPGMVPMSLIKKQFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L E +D++++E V E + P + + D + +
Sbjct: 61 SVLVEEVDKMMQEKVNEYIRDNKVNMLGMPLPNEEKM----APIDFDTQEDFEFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + EV ++ ID+Q+ + ++ E + + +
Sbjct: 117 APEFTAEISSADTIDYYTIEVSDELIDQQVKMYTQRAAKYDKVEQYEDKDMIKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG-----------DQKEIERFFPED 229
+ E + ++ + E I G K D E E
Sbjct: 177 ENGNTKEGGIQVEGAVMMPAYMKNDEQKAIFNGAKVNDVLVFNPATAFDNNEAELSSLLK 236
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+++A K +F ++E+ +P +N +L + E + KIK+
Sbjct: 237 IKKEEVADVKANFSFQVEEITRMVPAELNQELFDSVFGEGTVSNEEEFRGKIKEGIAKQF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + + + + + + E E +
Sbjct: 297 ESDSDYKFLIDVREYLVNKIGKLEFPDALLKRIMLLNNEEKG------------EAFVAE 344
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPG--HEKKMLDHF- 402
+ + + ++ + + N+I+V + ++ + + Q ++ + +L+++
Sbjct: 345 NYDKSIEELTWHLIKEQLLKDNDIKVEQADVINMAKEATRIQFAQYGMLNIPEDVLENYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K + L E K+ + + ++ V+ ++
Sbjct: 405 KEMLKKQETVEGLVNRAAESKLSAALKAKATLNNKAVSMEEFNK 448
>gi|41071|emb|CAA35634.1| unnamed protein product [Escherichia coli]
Length = 145
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIA 154
P++E+ + ++V + I EV + ++D + +
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLR 145
>gi|150009001|ref|YP_001303744.1| FKBP-type peptidyl-prolyl cis-transisomerase [Parabacteroides
distasonis ATCC 8503]
gi|255014832|ref|ZP_05286958.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
2_1_7]
gi|256840998|ref|ZP_05546505.1| trigger factor [Parabacteroides sp. D13]
gi|262383891|ref|ZP_06077027.1| trigger factor tig [Bacteroides sp. 2_1_33B]
gi|298375767|ref|ZP_06985723.1| trigger factor [Bacteroides sp. 3_1_19]
gi|301312051|ref|ZP_07217973.1| trigger factor [Bacteroides sp. 20_3]
gi|149937425|gb|ABR44122.1| FKBP-type peptidyl-prolyl cis-transisomerase [Parabacteroides
distasonis ATCC 8503]
gi|256736841|gb|EEU50168.1| trigger factor [Parabacteroides sp. D13]
gi|262294789|gb|EEY82721.1| trigger factor tig [Bacteroides sp. 2_1_33B]
gi|298266804|gb|EFI08461.1| trigger factor [Bacteroides sp. 3_1_19]
gi|300830153|gb|EFK60801.1| trigger factor [Bacteroides sp. 20_3]
Length = 450
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 69/464 (14%), Positives = 163/464 (35%), Gaps = 38/464 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V K ++ + + + I D ++ + +R KAN+ GFR G VP+ +K +YGK
Sbjct: 1 MNVSLKNNDAVSGIVKLEIVKADYADQVDKSLRSLRQKANVPGFRKGMVPMGMVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L E I++++ E + + + + D P E + D + +
Sbjct: 61 HVLVEEINKLVSENLFKYIRENDLHILGEPMPNETEQ----KPLDFDKEEDFEFCFDVAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I I + ++ +DE+ ++ Q+ N +++ + E +
Sbjct: 117 APEINIELSKNDKLPFYQVAIDEEMLNNQVNAYRSNFGSYDKVDEVEEKDMVKGTVAELE 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG-----------DQKEIERFFPED 229
++ + E +G K + E E
Sbjct: 177 NGAPKEGGIVVEDAVL-MPMYIKDEEEKAKFIGAKVNAVVVFNPNKAYEGAEAEIASFLK 235
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+ +A +F IKE+ +N +L ++ E+ KIK+
Sbjct: 236 IDKEKVAETTGDFSFEIKEITRHKDAEMNQELFDKVFGENVVTSEEEFKNKIKEALAEQF 295
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ + L + E ++ E ++ + ++ I ++
Sbjct: 296 APQSDFKFLTDTRDMLVERAGELNFADDLLKRWLLAANEKNTKEKIDEDFPQILQDL--- 352
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF- 402
++ + +KN ++V + ++++ + Q ++ + +LD++
Sbjct: 353 ---------KYQLIKENLVKKNGLKVEDADIENFAKRVAKAQFAQYGMLSVPEDVLDNYA 403
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K L + E+K+ + + V++ ++VT D+
Sbjct: 404 KDMLKNKQTLQNIIDRAVEEKLAAWLKEQVELDVKEVTADEFNK 447
>gi|288929034|ref|ZP_06422880.1| trigger factor [Prevotella sp. oral taxon 317 str. F0108]
gi|288330018|gb|EFC68603.1| trigger factor [Prevotella sp. oral taxon 317 str. F0108]
Length = 453
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 76/472 (16%), Positives = 171/472 (36%), Gaps = 40/472 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + ++ + L + + + + ++D R KANI GFRPG+ PLS IK G+
Sbjct: 1 MKISFENADKVNGLLTITVEEADYNEKVEKTLKDYRKKANIPGFRPGQAPLSLIKKQIGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ +E I +++ + + L + + + P + + E D++ +
Sbjct: 61 HVKAEEIQKLVSDTIFNYLKENNIQFLGEPMPSAKQEEQDLSKP-----APYTFVFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I++ D ++ VD+K +D Q+ A +E E ++
Sbjct: 116 APEIKLELTDKDKLDYYEITVDDKLVDEQVDLFASRAGKYEQVEEYQAKDMLKGDMKELN 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD-----------QKEIERFFPED 229
D E K ++ + ++ G+K G+ EIE
Sbjct: 176 ADGSEKEGGIVKEGAVLMPEYIKVEDQKKLFDGVKRGEVVVFNPKKAYPDSEIEVSSMLG 235
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
S + A F + E+ VN +L + E KI + +
Sbjct: 236 ISKEQAANVDSDFAFHVLEITRYAKAAVNQELFDAIYGEGAVKDEADFRSKIAEGIANQL 295
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
++L + V + + E + + DE+++
Sbjct: 296 VSNSDFKLLQDLRAYCEKKVGKLVFPEEMLKRI--------------MQKNVKDEKEVDE 341
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF- 402
+ + ++ + + N I+V+++++ A Q ++ + + +D++
Sbjct: 342 KFEASIEELKWHLIKEHLVKANEIKVSDDDVLDAARLQARIQFAQYGMNNLPDETVDNYA 401
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
K L E+K+++ + K V++ ++KV+ D E + +
Sbjct: 402 REMLKNRETLDGFVDRAVENKLVEAMKKVVKLKNKKVSLDDFNKMMEEDAKK 453
>gi|46447009|ref|YP_008374.1| trigger factor [Candidatus Protochlamydia amoebophila UWE25]
gi|67461775|sp|Q6MBF0|TIG_PARUW RecName: Full=Trigger factor; Short=TF
gi|46400650|emb|CAF24099.1| putative trigger factor [Candidatus Protochlamydia amoebophila
UWE25]
Length = 435
Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats.
Identities = 70/429 (16%), Positives = 152/429 (35%), Gaps = 14/429 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
V + + D+ + + ++ + ++ I + NI GFR GK P I YG +
Sbjct: 19 NVQITRGTHCQVKFDITVKPEAVVAAYQKALKTINKEINIPGFRKGKAPQQLILEKYGSN 78
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E +D +++ + L I L ++
Sbjct: 79 VQKECVDIVLQTGFNDALQLTHIHPLKDGHIKRPIVHY------CTQEKGAHFVLEFEAR 132
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P I +L + E + + + + + ++ V++
Sbjct: 133 PTIPSVQPQELHLHHQAPVQVTDEERKNALDQVLLQFTTYQPIEDRPVQEGDFINVDVTI 192
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
+ S S E ++GL G E E D K V
Sbjct: 193 LEETPRLIIDNQRTQVNQSGLP-SWIQEKVIGLNAGASAEGMTQPNEKFPDPDF--KSVP 249
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++K ++ ++++LA ++G ++ + +++++Q ++ + ++ + D +
Sbjct: 250 FRVTVKTIWQGNMPAIDDELAKKVGLQTVDELYQKLNERLEQEAQEDIYKQHIHHLEDQL 309
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
KY FD+P S +E+ L ++ +Q QN EE + R +
Sbjct: 310 IEKYPFDLPLSYIESNKQARLDDYLKQLGQESQLPQNY----EEIEKMIENSTIRGLQLY 365
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+L + N +EV+EEE+ L +Q+ P + + +D + +L + K+
Sbjct: 366 FLLRRVAADNKLEVSEEEVSQELSKQIALIPSGKSQ-IDIYGDKSKLREQLYNLALDRKI 424
Query: 422 IDHILKSVQ 430
+L Q
Sbjct: 425 KKFLLDQAQ 433
>gi|167765439|ref|ZP_02437552.1| hypothetical protein BACSTE_03829 [Bacteroides stercoris ATCC
43183]
gi|167697067|gb|EDS13646.1| hypothetical protein BACSTE_03829 [Bacteroides stercoris ATCC
43183]
Length = 451
Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats.
Identities = 60/453 (13%), Positives = 166/453 (36%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + + ++ +++ R KA I GFR G VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQEKVDKSLKNFRQKAQIPGFRKGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L+E +++++ + V + + P ++ + + + + +
Sbjct: 61 SVLAEEVNKLLSDSVYKYIQDNKVNILGEPLPNEDKQ----KAIDFDTMEEFEFLFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + D +V +V E+ +D Q+ + N +E + ++ + +
Sbjct: 117 APEFKAEVAADDKVDYYTIDVTEEMVDNQVKAYTQRNGKYEKVDAYADNDMLKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E + ++ + + I K D + D + +L+ +
Sbjct: 177 AEGNTKEGGVQVEGAVMMPAYMKNDDQKAIFANAKVNDVLVFNPYTAWDGNAAELS-SLL 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++ ++ + E + + +E R KVK I +
Sbjct: 236 KVDKEAAAEMKSNFSFQVEEITRFVAGELNQEIFDQVFGEGVVKTEEEFRAKVKEVIANQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + + + + N DE+ ++ + + +
Sbjct: 296 FVADSDYKFLLDVRKMLMEKVGKLEFPDALLKRIMRLNNQDKDEKFVEDNYDKSIEELTW 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + + N+I+V ++++ + + Q ++ +++LD++ K ++
Sbjct: 356 HLIKEQLVKANDIKVEQDDILNMAKETTRAQFAQYGMLSVPEEILDNYAKEMLKKKESIE 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L + E K+ + V + ++ ++
Sbjct: 416 GLVNRVVETKLASALKTQVTLENKNISAADFNK 448
>gi|333008039|gb|EGK27515.1| trigger factor [Shigella flexneri K-218]
Length = 293
Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 59/300 (19%), Positives = 138/300 (46%), Gaps = 9/300 (3%)
Query: 149 QMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETT 208
+ + K ++ K+ E D+VT+D+T SVD E + +G +
Sbjct: 1 MLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFE 60
Query: 209 EILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE 268
+ + G K G++ I+ FPE++ ++L GK + ++K+V + + R G E
Sbjct: 61 DGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVE 120
Query: 269 S--ESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVR 326
+R + +++ + +R +VK Q ++ + DVP +L+++E + + ++
Sbjct: 121 DGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAA 180
Query: 327 FEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ 386
N E + + AKRRV+ G++LG + N ++ EE ++ + +
Sbjct: 181 QRFGG------NEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEE 234
Query: 387 QLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ K++++ + K + +R E++ ++ +L ++ +++ TF++L + +
Sbjct: 235 MASAY-EDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA 293
>gi|282880879|ref|ZP_06289572.1| trigger factor [Prevotella timonensis CRIS 5C-B1]
gi|281305261|gb|EFA97328.1| trigger factor [Prevotella timonensis CRIS 5C-B1]
Length = 451
Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 67/467 (14%), Positives = 164/467 (35%), Gaps = 37/467 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L V + + + ++D R KAN+ GFRPG+VP+ IK +
Sbjct: 1 MNISFENPDKINGLLTVTVEEADYKEDVEKTLKDYRKKANVPGFRPGQVPMGMIKRQFEP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ +TI++++ + + E + + + P + + D +E +
Sbjct: 61 SVKMDTINKLVGQKLYEYIRENNIPMLGEPLASGKQETVD-----LEKEAPYTFTFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +I ++ VD+K ID+Q+ A +E ET +
Sbjct: 116 APDFKIELNGKNKIDYYNILVDDKLIDQQVEMFASRMGTYEKVETFEGNDMLKGDLRELD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEI----------ERFFPEDH 230
+ E ++ S + G K GD E
Sbjct: 176 ENGNTKEGGITVEAAVLMPSYIKEEGEKKKFDGAKLGDIITFNPRKAYASDVELASFLKI 235
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
+ + + ++ I E+ VN +L + + +KI + + +
Sbjct: 236 DKEQVKEHEGNFSYQITEISRYQNHAVNQELFDNVYGKDAVKDEKQFREKIAEGLKAQLE 295
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
+ + L V + +E + +N DE ++
Sbjct: 296 GESDYKFLLDTRAYAEKKVGKLEYPDELLKRI------------MRKNNPDKDEAFVEKN 343
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQS----ALYQQLGRFPGH--EKKMLDHF-- 402
+ + +++ ++ + + ++I+V +++++ A Q ++ + ++++
Sbjct: 344 YEESIKQLTWHLIKEQLVKAHDIKVEDQDIKEVARAAARAQFAQYGMSNVLDEYIENYVN 403
Query: 403 --QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
K ++ + K+ + KSV++ +++++ D E
Sbjct: 404 DLLKKQESVDAFVDRAIDSKLTQALKKSVKLNEKEISLDDFNKLFEE 450
>gi|260910390|ref|ZP_05917062.1| trigger factor [Prevotella sp. oral taxon 472 str. F0295]
gi|260635466|gb|EEX53484.1| trigger factor [Prevotella sp. oral taxon 472 str. F0295]
Length = 453
Score = 135 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 71/472 (15%), Positives = 170/472 (36%), Gaps = 40/472 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + ++ + +L +++ + + ++D R KANI GFRPG+ PLS IK G+
Sbjct: 1 MKISFENADKVNGQLTIVVEEADYNEKVEKTLKDYRKKANIPGFRPGQAPLSLIKKQVGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + +++++ E + L + + P + + D+ +
Sbjct: 61 QVKMDELNKLVGETIYSYLKDNNIQFLGEPLPSAKQEAQDLAKP-----APYTFVFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I++ D ++ VD+K +D Q+ A +E E ++
Sbjct: 116 APEIDLELTDKDKLDYYEITVDDKLVDEQVDMFASRAGKYEQVEKYQAKDMLKGDMKELN 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD-----------QKEIERFFPED 229
D E K ++ + ++ GLK G + IE
Sbjct: 176 ADGSEKEGGIVKEGAVLMPEYIKVDDQKKLFKGLKRGQVVVFNPKKAFPESVIEVSSMLG 235
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
S ++ A F + E+ + VN +L + E KI + +
Sbjct: 236 ISKEEAANVDSDFAFHVLEITRYVKAPVNQELFDAIYGEGAVKDEADFRSKIAEGIANQL 295
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ ++L + V + + E + + + D +++
Sbjct: 296 VSNSEYKLLQDLRAYCEKKVGKLVFPEEMLKRVMRTK--------------VKDAKEVDE 341
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF- 402
+ + ++ + + N+++V ++++ A Q ++ + +D++
Sbjct: 342 KFDASLEELKWHLIKERLVKANDVKVNDDDVLDAARLQARIQFAQYGMSNLPDETVDNYA 401
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
K L E+K+++ + K V++ +K++ D E + +
Sbjct: 402 REMLKNRETLDGFVDRAVENKLVEALKKVVKLKKKKISLDDFNKMMEEDAKK 453
>gi|255011710|ref|ZP_05283836.1| putative cell division trigger factor [Bacteroides fragilis 3_1_12]
gi|313149545|ref|ZP_07811738.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides fragilis
3_1_12]
gi|313138312|gb|EFR55672.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides fragilis
3_1_12]
Length = 451
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 64/453 (14%), Positives = 163/453 (35%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + ++ +++IR KA + GFRPG VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQPQVDKSLKNIRQKAQVPGFRPGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++++ +++++ E V E + + + P + + + + +
Sbjct: 61 SVIADEVNKLLSEKVYEYIKENNVNILGEPMPNEEKQP----DIDFDTMEEFEFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV ++ ++ Q+ + N +E E E + +
Sbjct: 117 APEFKAEVSSQDKVDYYTIEVTDEMVENQIKAYTQRNGKYEQVEAYEENDMLKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E + ++ S E I K D + + ++A +
Sbjct: 177 EEGNTKEGGIQVEGAVMMPSYMKNDEQKAIFANAKVNDVLVFNPDAAYEGNAVEIA-SLL 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++ ++ + E + K +E R KVK I
Sbjct: 236 KIDKEAAAEVKSNFSFQVEEVTRFVNGELNQELFDQVFGKDAVKTEEEFRAKVKESIAAQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + + + + + N EE + + + +
Sbjct: 296 FVADSDYKFLIDVRKVLADKVGKLEFPDALLKRVMLMNNKDKGEEFVNENYDKSIEELTW 355
Query: 361 GIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPG--HEKKMLDHF----QKYPNALA 410
++ + ++N+I+V ++++ + A Q ++ +L+++ K ++
Sbjct: 356 HLIKEQLVKENDIKVEQDDVINMAKEATKAQFAQYGMLTIPDDILENYAKEMLKKKESID 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L + E K+ + V + ++ V+ ++
Sbjct: 416 GLVNRVVETKLAAALKGKVTLENKTVSMEEFNK 448
>gi|332098513|gb|EGJ03479.1| trigger factor [Shigella boydii 3594-74]
Length = 301
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 60/308 (19%), Positives = 145/308 (47%), Gaps = 9/308 (2%)
Query: 141 VDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGS 200
+ + ++D + + K ++ K++ E D+VT+D+T SVD+ E + +G
Sbjct: 1 MTDADVDGMLDTLRKQQATWKEKDSAVEAEDRVTIDFTGSVDSEEFEGGKASDFVLAMGQ 60
Query: 201 ADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNND 260
+ + + G K G++ I+ FPE++ ++L GK + ++K+V + +
Sbjct: 61 GRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAE 120
Query: 261 LAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEY 318
R G E +R + +++ + +R +VK Q ++ + DVP +L+++E
Sbjct: 121 FIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEI 180
Query: 319 NGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEE 378
+ + ++ N E + + AKRRV+ G++LG + N ++ EE
Sbjct: 181 DVLRRQAAQRFGG------NEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEE 234
Query: 379 EMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTF 438
++ + + + K++++ + K + +R E++ ++ +L ++ +++ TF
Sbjct: 235 RVKGLIEEMASAY-EDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEKETTF 293
Query: 439 DQLFDNSS 446
++L + +
Sbjct: 294 NELMNQQA 301
>gi|53715363|ref|YP_101355.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides fragilis
YCH46]
gi|60683332|ref|YP_213476.1| putative cell division trigger factor [Bacteroides fragilis NCTC
9343]
gi|253567252|ref|ZP_04844702.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
3_2_5]
gi|265767850|ref|ZP_06095382.1| trigger factor protein [Bacteroides sp. 2_1_16]
gi|52218228|dbj|BAD50821.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides fragilis
YCH46]
gi|60494766|emb|CAH09572.1| putative cell division trigger factor [Bacteroides fragilis NCTC
9343]
gi|251944083|gb|EES84602.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
3_2_5]
gi|263252522|gb|EEZ24050.1| trigger factor protein [Bacteroides sp. 2_1_16]
gi|301164821|emb|CBW24381.1| putative cell division trigger factor [Bacteroides fragilis 638R]
Length = 451
Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats.
Identities = 63/453 (13%), Positives = 162/453 (35%), Gaps = 15/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + ++ +++IR KA + GFRPG VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQPQVDKSLKNIRQKAQVPGFRPGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++++ +++++ E V + + P + + + + +
Sbjct: 61 SVIADEVNKLLSEKVYAYIKDNNINILGEPMPNEEKQP----DIDFDTMEEFEFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + D +V EV ++ ++ Q+ + N +E + E + +
Sbjct: 117 APEFKAEVSDQDKVDYYTIEVTDEMVENQIKAYTQRNGKYEKVDAYEENDMLKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E + ++ S E I K D + + ++A +
Sbjct: 177 EEGNTKEGGIQVEGAVMMPSYMKNDEQKAIFANAKVNDVLVFNPNTAYEGNAVEMA-SLL 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+++ ++ + E + K +E R KVK I
Sbjct: 236 KIDKEAAAEVKGNFSFQVEEVTRFVNGELNQEIFDQVFGKDVVKTEEEFRAKVKESIAAQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + + + + + + N EE + + + +
Sbjct: 296 FVADSDYKFLIDVRKVLTDKVGKLEFPDALLKRVMLVNNKDKGEEFVNENYDKSIEELTW 355
Query: 361 GIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPG--HEKKMLDHF----QKYPNALA 410
++ + ++N+I+V ++++ + A Q ++ +L+++ K ++
Sbjct: 356 HLIKEQLVKENDIKVEQDDVINMAKEATKAQFAQYGMLTIPDDILENYAKEMLKKKESID 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L + E K+ + V + ++ V+ ++
Sbjct: 416 GLVNRVVETKLAAALKGKVTLENKTVSMEEFNK 448
>gi|55670534|pdb|1W2B|5 Chain 5, Trigger Factor Ribosome Binding Domain In Complex With 50s
Length = 144
Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMA 151
P++E+ + ++V + I EV + ++D +
Sbjct: 112 YPEVELQGLEAIEVEKPIVEVTDADVDGMLD 142
>gi|298384790|ref|ZP_06994349.1| trigger factor [Bacteroides sp. 1_1_14]
gi|298261934|gb|EFI04799.1| trigger factor [Bacteroides sp. 1_1_14]
Length = 451
Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats.
Identities = 65/464 (14%), Positives = 159/464 (34%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + + ++ ++ R KA + GFR G VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQEKVDKSLKSFRQKAQMPGFRKGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E ++++++E V + + P + + + + + +
Sbjct: 61 SVIAEEVNKVLQEAVYNYIKENKVNMLGEPLPNEEKQQV----IDFDTMEEFEFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV ++ I+ Q+ + ++ + + + +
Sbjct: 117 APEFKAEVSAKDKVDYYTIEVSDEMIENQVKMYTQRTGKYDKVDVYEDNDMLKGLLAQLD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD------ 234
+ E + ++ S + I K D D +
Sbjct: 177 EEGNTKEGGIQVEGAVLMPSYMKNDDQKAIFANAKVNDVLVFNPNVAYDGHAAELGSLLK 236
Query: 235 -----LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
K +F ++E+ +P + ++ + E KIK+
Sbjct: 237 IDKEIAKDVKSDFSFQVEEITRFVPGELTQEVFDQAFGEGVVKTEEEFRAKIKEEIAARF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L I V + + + + E ++N D EE
Sbjct: 297 VADSDYKFLIDIRKVMMDKVGKLEFSDALLKRIMLLNNEEKGEEYVAENYDKSVEEL--- 353
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF- 402
++ + E N+I+V +E++ + Q ++ + +LD++
Sbjct: 354 ---------TWHLIKEQLVEANDIKVEQEDVLKMAKETTKAQFAQYGMLSVPEDVLDNYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K + + L + + E K+ + V + ++ V+ ++
Sbjct: 405 QEMLKKKDTINNLVSRVVEVKLAAALKAQVTLENKNVSMEEFNK 448
>gi|194334753|ref|YP_002016613.1| trigger factor [Prosthecochloris aestuarii DSM 271]
gi|238693310|sp|B4S4S0|TIG_PROA2 RecName: Full=Trigger factor; Short=TF
gi|194312571|gb|ACF46966.1| trigger factor [Prosthecochloris aestuarii DSM 271]
Length = 428
Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats.
Identities = 86/435 (19%), Positives = 171/435 (39%), Gaps = 24/435 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ K +++L++I+ + I+D + IKGFR G VP+ IK L G
Sbjct: 1 MQHTIKNVSETEQQLEIILSAEEFNPEVELEIQDAKKNIQIKGFRKGHVPVGLIKKLMGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + +++ + EI K + A R + D L + LSY+I
Sbjct: 61 AIEASVAEKLASKYFGEIAEKETIKPASRAQLDNFSFNDD----------QLTITLSYEI 110
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD-YTV 179
P+ E+ F +D+ V ++++ ++ I K + + + D V D +
Sbjct: 111 HPEFELKDFSGYSFVEDLYTVSDEDVQNEINLILKGHGTLVSVDEAATSNDTVIADLIKL 170
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ +E+Q +N F + + + L G K + ++ E+ K
Sbjct: 171 DAEGKEIEEQKTENHHFNLEYLPEDNPFKKALTGAKAEETVNVDIEPKEEGEE------K 224
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V S+KEV + ++L F+S A Q++++H Q +
Sbjct: 225 VSYEISVKEVKRMELPELTDELLKEITQEKFDSIDAFTQDVRQQLEEHFSGKSEQDLLES 284
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I + + P ++V++ N +++ + + + D E A +
Sbjct: 285 ISSKLIEENPVATPSAMVDSFENMLIENAKRQFGGNFPAGFD----DTELRASMRPNAVK 340
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
++ I E NN+EVT+E++++ ++ + P + + L + + I
Sbjct: 341 HAQWMLISQKIAETNNLEVTDEDIKAYAEKEAEKNPSVKAEELINTYMSTEFKDYMIDTI 400
Query: 417 FEDKVIDHILKSVQI 431
+DK+ I SV I
Sbjct: 401 LKDKIYGIIKSSVTI 415
>gi|225548841|ref|ZP_03769818.1| trigger factor [Borrelia burgdorferi 94a]
gi|225370444|gb|EEG99880.1| trigger factor [Borrelia burgdorferi 94a]
Length = 454
Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats.
Identities = 71/449 (15%), Positives = 188/449 (41%), Gaps = 16/449 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + + + + +N ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVVIRVSKSVIQEKYNSLLQDYSSRLKIQGFRIGKVPINVIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I E + + + T+ E + + D + +Y+ P+
Sbjct: 67 TVLEEVINNSFKEFFKEEFKMPLSYATPTVKE-----KNLKLNLDKDFEFTFTYETYPEF 121
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY----TVS 180
+I SFD++ + +I EV + D + E E + + ++ +
Sbjct: 122 KIPSFDEIDIKVEIPEVFIDDSDIDDEIKNLQIENSIIIEDEEGVVKEDSIVKVDFVELD 181
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + ++ F VG ++ + + + ++G++ +++ IE+ + D+ ++LAG
Sbjct: 182 DLSNEIVSTKRQGFVFTVGKSETYYDFDKDVIGMRINEERVIEKSYIADYKFEELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +++++ A + + ++ + E +
Sbjct: 242 KLKIKIKSIKKRDLPLIDDEFAQDISDKYNTLDDLKNFIRSSLLNIVEEKKETLKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN---VDSIDEEDLQYYHMLAK 355
IS K D+P S++E E + + + + + S
Sbjct: 302 STISEKLEIDIPHSMIEAEIEIAFKDAKRQNKNNMSLEEFKSIFYSSGYIGGDNLKDEIL 361
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + +++ + + + I+VTE +++ + +Q +++ + + N ++ L+
Sbjct: 362 GNLKSKLIMQKMVDLDPIKVTESDVEDEMARQSKNLGVSYEEIKKFY-EDQNLISYLKDD 420
Query: 416 IFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
I ++ IL++++ + +K+ F +
Sbjct: 421 IKRERAKKKILENLKEVKGKKLNFRDFVN 449
>gi|88801528|ref|ZP_01117056.1| FKBP-type peptidyl-prolyl cis-transisomerase [Polaribacter irgensii
23-P]
gi|88782186|gb|EAR13363.1| FKBP-type peptidyl-prolyl cis-transisomerase [Polaribacter irgensii
23-P]
Length = 440
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 67/464 (14%), Positives = 174/464 (37%), Gaps = 47/464 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + V I + E + D R KA++ GFR G+VP+ IK +GK
Sbjct: 1 MNITRENIDALNAVVKVDIVAEDYQAKVEELLTDRRKKADVPGFRKGQVPMGMIKKQFGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L E ++++++E + L++ P + E L +
Sbjct: 61 AVLMEEVNKLLQESLNAFLAEEKLALLGNPLPRVKE-------DFNWDAATLSFEFELGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ +VT+ E+ ++ ++ I + + T +
Sbjct: 114 TPEFEVDLKSKKKVTEYKIIATEELLEEELINIQTRYGIATPVDE-----VVLEASVTGT 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD----------QKEIERFFPEDH 230
N E +K + + L+G K+GD ++ + D
Sbjct: 169 FVNEEKEINTKGTFLLKDLKG---KKNHKKLLGAKSGDTIKLETKDLFEETQKLETILDI 225
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
+ ++ V + +I ++ + ++ +L +L + KIK+ +E +
Sbjct: 226 AGDEIRDVPVSVTLTITDITTTALADLDKELFDKLFADGSVTSAAELKAKIKEDAEIQFK 285
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
Q+ +Q+L+ I+ + L ++ + +A +K D E +
Sbjct: 286 QQGDQQLLNAITGHLVENTKFEL-------PAVFLKKWLGTAGEKPLTPAEADAEFAK-- 336
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFP-GHEKK-----MLD 400
++ + ++ G I + ++I++ E+ + + Q+ +F + ++ +
Sbjct: 337 ---SENGLRYQLIEGKIMKDHDIKIDYTELVAYAKGFIRTQMAQFGNMNPEEKELDDIAG 393
Query: 401 HFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
+ +L++ + K++ +++ ++++++
Sbjct: 394 RILQNQEEAQKLQSQLISQKLLAFYKENMSFKSKELSYEAFTKE 437
>gi|317504963|ref|ZP_07962911.1| trigger factor [Prevotella salivae DSM 15606]
gi|315663845|gb|EFV03564.1| trigger factor [Prevotella salivae DSM 15606]
Length = 447
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 69/464 (14%), Positives = 157/464 (33%), Gaps = 37/464 (7%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
+ + + L + + S + ++D R KAN GFRPG VP+ IK YG S
Sbjct: 1 SFENPDKVNGLLTITVEEADYQASVEKTLKDYRKKANYPGFRPGMVPMGLIKKQYGASAK 60
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+ I+++I E + + + + P + + D +E + P+
Sbjct: 61 MDAINKLIGEQIYKYMQDNKIQMLGEPLPSEKQEAQD-----LEKPAPYTFAFDIAVAPE 115
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
+I ++ VD+ IDRQ+ N +E E+ + +
Sbjct: 116 FKIELNGHNKIDHYTIIVDDALIDRQVEMFTSRNGTYEKAESYEDNDMLKGDLRELDEKG 175
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD----------QKEIERFFPEDHSIK 233
ED I+ + + G K GD + E E
Sbjct: 176 NTKEDGITVEAASILPNYIKDEAQKALFNGAKLGDIITLNVSKAFENEAEIASLLKVERD 235
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
+ K ++ I ++ V+ +L L + +KI + + +
Sbjct: 236 RVKDIKSDFSYQITDIQRYKKHPVDQELFDSLFGKDTVKSEKEFREKIAEGLKEQLAVDA 295
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
+ + + V + + + + EE ++ +
Sbjct: 296 DYKFILDVRAYCEKKVGKLEFPDALLKRIMLNNNKDKG------------EEFVEKNYEQ 343
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF----Q 403
+ + + ++ + N I+V +E++ +A + ++ + + ++++
Sbjct: 344 SIKELTWHLIKEQLVADNQIKVNDEDVLNAAKETARVQFAQYGMNNVPDEYVENYAKEIL 403
Query: 404 KYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
K + L + K+ D + K V++ +++++ D SE
Sbjct: 404 KKRENVDGLVDRAVDIKLTDALKKVVKLNEKEISLDDFNKMMSE 447
>gi|29349249|ref|NP_812752.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|253573096|ref|ZP_04850487.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
1_1_6]
gi|29341157|gb|AAO78946.1| FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor)
[Bacteroides thetaiotaomicron VPI-5482]
gi|251837319|gb|EES65419.1| FKBP-type peptidyl-prolyl cis-transisomerase [Bacteroides sp.
1_1_6]
Length = 451
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 65/464 (14%), Positives = 160/464 (34%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + +L V + + ++ ++ R KA + GFR G VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSAQLTVKLEKADYQEKVDKSLKSFRQKAQMPGFRKGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E ++++++E V + + P + + + + + +
Sbjct: 61 SVIAEEVNKVLQEAVYNYIKENKVNMLGEPLPNEEKQQV----IDFDTMEEFEFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V EV ++ I+ Q+ + ++ + + + +
Sbjct: 117 APEFKAEVSAKDKVDYYTIEVSDEMIENQVKMYTQRTGKYDKVDVYEDNDMLKGLLAQLD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD------ 234
+ E + ++ S + I K D D +
Sbjct: 177 EEGNTKEGGIQVEGAVLMPSYMKNDDQKAIFANAKVNDVLVFNPNVAYDGHAAELGSLLK 236
Query: 235 -----LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
K +F ++E+ +P + ++ + E KIK+
Sbjct: 237 IDKEIAKDVKSDFSFQVEEITRFVPGELTQEVFDQAFGEGVVKTEEEFRAKIKEEIAARF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L I V + + + + E ++N D EE
Sbjct: 297 VADSDYKFLIDIRKVMMDKVGKLEFSDALLKRIMLLNNEEKGEEYVAENYDKSIEEL--- 353
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF- 402
++ + E N+I+V +E++ + Q ++ + +LD++
Sbjct: 354 ---------TWHLIKEQLVEANDIKVEQEDVLKMAKETTKAQFAQYGMLSVPEDVLDNYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K + + L + + E K+ + V + ++ V+ ++
Sbjct: 405 QEMLKKKDTINNLVSRVVEVKLAAALKAQVTLENKNVSMEEFNK 448
>gi|189463684|ref|ZP_03012469.1| hypothetical protein BACINT_00015 [Bacteroides intestinalis DSM
17393]
gi|189438634|gb|EDV07619.1| hypothetical protein BACINT_00015 [Bacteroides intestinalis DSM
17393]
Length = 451
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 62/464 (13%), Positives = 166/464 (35%), Gaps = 37/464 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + + ++ ++ +R KA + GFRPG VP+S +K +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQEKVDKSLKSLRQKAQVPGFRPGMVPMSLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+++E +++ + E V + + + P ++ + + + +
Sbjct: 61 SVIAEEVNKALSEAVYKYIQDNNVSILGEPLPNEDKQP----EIDFDTMEEFEFLFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + +V + +V E ++ Q+ + N +E + + + +
Sbjct: 117 APEFKAEVDAKDKVDYYLIDVTEDMVNNQVKAYTQRNGKYEKVDVYEDKDMLKGLLAELD 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD-----------QKEIERFFPED 229
+ E + ++ S E I K D E
Sbjct: 177 ENGNTKEGGIQVEGAVMMPSYMKNDEQKAIFANAKVNDVLVFNPHTAWEGNAAELSSLLK 236
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
++ A K ++ ++EV + + ++ ++ + KIK+
Sbjct: 237 IDKEEAAEMKSNFSYQVEEVTRFVEGELTQEIFDQVCGKDVVKTEEEFRAKIKEVIANQF 296
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + V + + + ++ + DE+ +
Sbjct: 297 VADSDYKFLIDVRKMLMEKVGKLEFPDALLKRIMRMNNQDK------------DEKFVDD 344
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGH--EKKMLDHF- 402
+ + + ++ + + NNI+V +E++ + A Q ++ + +L+++
Sbjct: 345 NYDKSIEELTWHLIKEQLVKANNIKVEQEDVVNMAKEATRAQFAQYGMMSVPEDLLENYA 404
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K ++ L + E K+ + V++ ++ ++ ++
Sbjct: 405 KEMLKKKESVEGLVNRVVETKLASALKSQVKLNNKTISAEEFNK 448
>gi|224025976|ref|ZP_03644342.1| hypothetical protein BACCOPRO_02727 [Bacteroides coprophilus DSM
18228]
gi|224019212|gb|EEF77210.1| hypothetical protein BACCOPRO_02727 [Bacteroides coprophilus DSM
18228]
Length = 448
Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats.
Identities = 70/462 (15%), Positives = 163/462 (35%), Gaps = 40/462 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L V I + + ++ +R K N+ GFR G VP IK YG
Sbjct: 1 MNISLQNVDSVSAVLTVQIEKADYQEKVEKALKTLRQKVNMPGFRKGMVPAGLIKKQYGV 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L+E ID++++E V E + + P N+ E + + +
Sbjct: 61 SVLAEEIDKLLQEKVFEYIRENKVNMLGTPLPKENQ-------VNFETEENFEFSFDIAL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + + V V ++ +D+Q+ + +E E + + +
Sbjct: 114 APEFNVELSANDSVDYYDINVTDEMVDQQVKMYTQRTAKYEKVEDYQDNDMLKGLLAELD 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG-----------DQKEIERFFPED 229
+ E + ++ E I G KT D E E
Sbjct: 174 ENGNTKEGGVQVEGAVMMPVYMKNDEQKAIFNGAKTNTVLVFNPSVAFDNNEAELASLLK 233
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+++A K +F I+E+ +P + +L ++ E ++ +IK+
Sbjct: 234 LKKEEVADHKGNFSFQIEEITRMIPGELTQELFDQVLGEGKAHSEEEFRAQIKETIAKQF 293
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + T + + + + + ++N + EE
Sbjct: 294 EADSDYKFLIDVRTYLTNKIGKLEFPDALLKRIMLDNNKEKGEEFVAENYEKSLEEL--- 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF- 402
++ + N+I+V + ++ + + Q ++ +++L+++
Sbjct: 351 ---------TWHLIKEKLVAANDIKVEQGDLTNMAKEATRAQFAQYGMINVPEELLENYS 401
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQL 441
K ++ L + E K+ + + V + + V+ ++
Sbjct: 402 KEMLKKQESVEALLNRVVESKLSETLKGQVTLNHKAVSAEEF 443
>gi|110638105|ref|YP_678314.1| peptidyl-prolyl cis-trans isomerase [Cytophaga hutchinsonii ATCC
33406]
gi|110280786|gb|ABG58972.1| peptidyl-prolyl cis-trans isomerase, trigger factor [Cytophaga
hutchinsonii ATCC 33406]
Length = 446
Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 63/466 (13%), Positives = 164/466 (35%), Gaps = 48/466 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+++ L V I ++ ++++ K ++KGFR GKVP S ++ +YGK
Sbjct: 1 MEIVLDKKGATSATLKVTIKADDYQPKVQSKLKEYGKKVSLKGFRQGKVPTSVVERMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + I++++ E V + + + P ++ + + + + +
Sbjct: 61 SLKVDEINQLLSESVGKYIKEEKLNIIGYPLPD----QNKASKIDWDNQSEYEFSYDLGL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P+ + D + VT+ EVD K + + I + + E
Sbjct: 117 IPEFKYELSDKVSVTKYEIEVDPKRVAETLDNIRRQQGKMDEAEVVESGD---------Y 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERF----------FPEDH 230
++ + + + + ++ S + + + G KTGD E +
Sbjct: 168 INGTMKSLTTDFSTETMIPSDKIAAAELKNFTGKKTGDVIEFDIDKAFTEKSSIAHVTGL 227
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
+ ++ + +F++ + P +N + ++ +QK+++
Sbjct: 228 TKEEAETTSGKFSFTVTGIRRSFPAELNQEFFDKIFGPGVVTSEEAFNQKLEETIRENYN 287
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
++ + + + ++ + + E L + Q ++ + ++
Sbjct: 288 REAEVLVSREVRKEFLANTKVEISEAFLKRFLLINNEGKMTPEQIDKDFNLYQDDL---- 343
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGR-----------FPGHEKKML 399
++ IGE N+I+V E+ + + + K+
Sbjct: 344 --------KWLLIRNKIGEDNDIKVEHSEVIARTKELFMQQFGGLTSLSEEMDETMNKLA 395
Query: 400 DHFQKYPNALAELR--APIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
D++ N R ++ KV+ I + +K++ D+
Sbjct: 396 DNYLSSENGKNYNRTFEEVYYTKVLKFIESKLNFKTKKISVDEFEK 441
>gi|229815145|ref|ZP_04445482.1| hypothetical protein COLINT_02191 [Collinsella intestinalis DSM
13280]
gi|229809375|gb|EEP45140.1| hypothetical protein COLINT_02191 [Collinsella intestinalis DSM
13280]
Length = 431
Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 80/441 (18%), Positives = 160/441 (36%), Gaps = 29/441 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + K V IP+ + + + + GFR GK P I S GK
Sbjct: 1 MNIT-SDVKDAKLTATVTIPAADVDAIIKKAYKAAAKQYRFPGFRAGKAPRPVIDSALGK 59
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++L++ +E+I +L++ D + L D + +
Sbjct: 60 DAVLAQATNELIGSNEGNVLNELDIVPV--------KEGDYQEIDLCADGTDYTYTVEFT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P E+SS+D +++ EV E EID+Q+ + + FE E E D VTVD
Sbjct: 112 LRPSAELSSYDAVEIEMPPAEVTEAEIDQQVDMLMGYHATFEDVERAVEGSDYVTVDIKN 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ L + +G+ L E E L+G+ + K I + +
Sbjct: 172 VANAEALAG---EGRVIAMGAGHLPKEFDEGLLGMNVDETKTISWTPEVEGAE------G 222
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V +N++ A F+ AMR +I+ + Q + + +
Sbjct: 223 ASVEVTVKGVKERKLPELNDEFAKTNFGFDGVDAMRDAVKLEIESDKSSQLPQLKENRCV 282
Query: 299 DYISNK-----YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
++ + D +S+ + LQ + S + Q E+ + H
Sbjct: 283 AKLAERLQLDEMDEDYEQSVFQELGQNFLQSLSARGMSLDGWLQANRISSEDFIADLHRQ 342
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + L + + +EV+ E++ R + + + +R
Sbjct: 343 ANDVARESLALDALARELKVEVSAEDVDGEFE----RAGIEDVEASKAQFVADGRMPAVR 398
Query: 414 APIFEDKVIDHILKSVQIVDR 434
I K +D ++++ ++ +
Sbjct: 399 DSIRRSKAVDWLVENAKVTEV 419
>gi|51598862|ref|YP_073050.1| trigger factor [Borrelia garinii PBi]
gi|67461721|sp|Q660R3|TIG_BORGA RecName: Full=Trigger factor; Short=TF
gi|51573433|gb|AAU07458.1| trigger factor [Borrelia garinii PBi]
Length = 452
Score = 133 bits (335), Expect = 4e-29, Method: Composition-based stats.
Identities = 78/447 (17%), Positives = 191/447 (42%), Gaps = 14/447 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + N + + + ++D S+ I+GFR GKVP++ I++ Y + + +
Sbjct: 7 IKLLPGSKVEVLIRVSKNIIQEKYKSLLQDYSSRLKIQGFRIGKVPINIIENKYSEGLKA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E+I E + +R + TI E ++ D + +Y+ P+
Sbjct: 67 TVLEEVINGSFKEFFKEEPKRPLSYAAPTIKE-----KDLRLDLDKDFEFTFTYETYPEF 121
Query: 125 EIS--SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVD 182
EI D++V +D+ +ID ++ + N E + + V +D
Sbjct: 122 EIPSVDSIDIKVEVPEVFIDDSDIDNEIRRLQIENSIIIEDEEGVVKKNSIVKVDFVELD 181
Query: 183 NVILEDQSKKNVQFIV--GSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+++ E S K F+ G ++ + + ++G++ ++K +E+ + D+ ++LAG
Sbjct: 182 DLLNEILSTKRQDFVFTVGKSETYYDFDRDVIGMRINEEKVLEKSYITDYKFEELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +++++ A +++ ++ I E +
Sbjct: 242 KLKIKIKSIKKRDLPLIDDEFAQDISDRYDTLDDLKNFIRSDILNVIEEKKEALKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY-HMLAKRR 357
IS K D+P S++E E + + ++ +++
Sbjct: 302 STISEKLEIDIPHSMIEAEIEIAFKDTAKQNKMGLEEFKSIFYSSGYVGSVNLKDKILSN 361
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + +++ + + + IEVTE +++ + +Q +++ + + N ++ L+ I
Sbjct: 362 LKSKLIIQKMVDLDPIEVTESDLEDEIARQSENSGMSCEEIKKFY-EDQNLISYLKDDIK 420
Query: 418 EDKVIDHILKSVQ-IVDRKVTFDQLFD 443
+V IL +++ + ++V+F +
Sbjct: 421 RKRVKKKILANLKELKGKQVSFKDFVN 447
>gi|189462221|ref|ZP_03011006.1| hypothetical protein BACCOP_02904 [Bacteroides coprocola DSM 17136]
gi|189431074|gb|EDV00059.1| hypothetical protein BACCOP_02904 [Bacteroides coprocola DSM 17136]
Length = 448
Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats.
Identities = 68/464 (14%), Positives = 167/464 (35%), Gaps = 40/464 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + L V I + + ++ +R + N+ GFR G VP++ IK YG
Sbjct: 1 MNISLQNVDKVSAVLTVQIEKADYQEKVEKSLKTLRQRVNMPGFRKGMVPMALIKKQYGI 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L E +D++++E V E + + + P + E + + +
Sbjct: 61 SVLVEEVDKLMQEKVGEYIRENNVNMLGTP-------LPKENNVNFEADENFEFSFDIAL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ + ++ V V ++ +D+Q+ + ++ E E + +
Sbjct: 114 APEFNVELSNNDTVDYYDINVTDEMVDQQVKMYTQRTAKYDKVEEYQENDMLKGLLAELD 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG-----------DQKEIERFFPED 229
+ E + ++ + + I G KT D E E
Sbjct: 174 ENGNTKEGGLQVEGAVMMPTYMKNDDQKAIFNGAKTNTVLVFNPATAFDNNEAELASLLK 233
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+++A K +F I+E+ +P +N +L ++ E ++ +IK+
Sbjct: 234 IKKEEVANYKGNFSFQIEEITRMIPGDLNQELFDQVLGEGKAHSEEEFRAQIKETIAKQF 293
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + N + + + +N EE +
Sbjct: 294 EADSDYKFLIDVRNYVVNKIGKLEF------------ADELMKRIMLENNKEKGEEFVAE 341
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF- 402
++ + + ++ + NNI+V + ++ + + Q ++ ++L+++
Sbjct: 342 HYEKSLEELTWHLIKEKLVAANNIKVEQADITNMAKEATRAQFAQYGMINVPDELLENYS 401
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K ++ L + E K+ + + V + + V+ ++
Sbjct: 402 KEMLKKRESVEALVNRVVEAKLSEILKGQVTLNHKAVSAEEFNK 445
>gi|219667936|ref|YP_002458371.1| trigger factor [Desulfitobacterium hafniense DCB-2]
gi|219538196|gb|ACL19935.1| trigger factor [Desulfitobacterium hafniense DCB-2]
Length = 432
Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats.
Identities = 68/439 (15%), Positives = 162/439 (36%), Gaps = 18/439 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E + I D+ + + + + GFR G VP S I+S YG
Sbjct: 1 MNAVLENIENSEAHFRFTIDYKVFADALEKTYKKNKKNYQVAGFRKGSVPRSVIESQYGS 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +D I+ + + + P I + G IE +L ++ S
Sbjct: 61 TVFYQEALDLIMADEYKKAVEGLALDTIGDPDIEV---------GEIEKGQELSVKASVP 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
++P++ + + ++V +K + E + + TV
Sbjct: 112 VVPEVTLGQLEGIEVVMPKAREVKKADIEKSLEELQYKNKKITDKEMEPAEKGDTVTVDY 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + + + + ++ + L G + GD IE+ FP+DH +AGK
Sbjct: 172 DCELDGTKFEPVVDYKALLDDSPDTMGFELQLKGARKGDILTIEQVFPQDHLQPQIAGKT 231
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
N ++K+V + +++ A + + R + +++ + V+ + IL
Sbjct: 232 ACFNVTVKKVERIEMLPLDDAFAQTVGNVSTMEEFRAEIKKNLEEAAAQRVQMQRNNAIL 291
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLA 354
+ + +PESL+ +L++ ++ + Q ++ E+ + A
Sbjct: 292 SELFKRCQVKIPESLIMQRAMSMLEQFSGQLEAEGGTLDLYLQLMNRKSEDFKREVWQDA 351
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + +L + ++ V+EEE+ + + + + ++
Sbjct: 352 ENSLKADYILDKVIKEKGYTVSEEELNQGCEKFALSINMAPENARQNLG---PLVNKVEY 408
Query: 415 PIFEDKVIDHILKSVQIVD 433
+ +K ++L+ I +
Sbjct: 409 DLKAEKAFHYLLEHAVIRE 427
>gi|294660404|ref|NP_853155.2| trigger factor [Mycoplasma gallisepticum str. R(low)]
gi|298286874|sp|Q7NBA6|TIG_MYCGA RecName: Full=Trigger factor; Short=TF
gi|284812063|gb|AAP56723.2| Trigger factor [Mycoplasma gallisepticum str. R(low)]
gi|284930637|gb|ADC30576.1| Trigger factor [Mycoplasma gallisepticum str. R(high)]
Length = 443
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 72/442 (16%), Positives = 182/442 (41%), Gaps = 20/442 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
++ EK + K + V + +++ +++ I+GFR G VP +
Sbjct: 3 KIREKTNADHKVKYIVDVNEKNWNEAYQKKLNAAVKNVKIQGFRKGHVPYQEAIKHIDQI 62
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ ++++++ I E++ + + E+ S + L L S++
Sbjct: 63 GLFDRAVNQLVQPIYLELVKQEKIK-----DSETVLEENPEVSVVEIDDKKLALSYSFET 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
+P++++ + + V ++++ ++ I K+ K+ + E GD +D++
Sbjct: 118 IPEVKVGDYLKINGFLSETPVKDEDVQTELVRIFKSAGKLVDKKEGATLEKGDIAFLDFS 177
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+DN E KN + +GS + +VG+K G+++++ FP+D+ K AGK
Sbjct: 178 GEIDNKAFEGGKAKNYELEIGSNSFIPGFEDQMVGMKVGEKRDLNLTFPKDYHEKTYAGK 237
Query: 239 KVRLNFSIKEVFSPLPVVVNND---LAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
V + + + + ++ +++ + +++ ++ + Q
Sbjct: 238 PVLFKVKLNSIKEVQLPEMTVEKLNELMKTQYKNLDEAKEDIKKRMDRNQQEHANQMNTM 297
Query: 296 QILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHM-- 352
+ + + F +P+SL++ E N + Q+ +M ++ I + + +
Sbjct: 298 LLTQFANEDCQFSHIPKSLLDREVNLLYQQFANQMQQIKMSVEDALKIQNQTKEQLYQRL 357
Query: 353 --LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN--- 407
A R + +VL IG+ I V+E E+ + +++ +++ + + N
Sbjct: 358 TEQATRAIKLVLVLEEIGDLEKISVSEAEINQEIEERIKEISNNQELPKEQYDAIKNYFV 417
Query: 408 -ALAELRAPIFEDKVIDHILKS 428
+ + + KV+D I+K
Sbjct: 418 TQKELIESMLTNKKVVDLIIKK 439
>gi|183220372|ref|YP_001838368.1| trigger factor 1 [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
gi|167778794|gb|ABZ97092.1| Trigger factor 1 (TF 1) [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 448
Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats.
Identities = 69/458 (15%), Positives = 181/458 (39%), Gaps = 18/458 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ K + +L + + + ++ + ++ K I GFRPGK PL+ ++ + G
Sbjct: 1 MEFTAKKNNNATCDLSIQFSAEEVRTAYGKAYQNAAEKVKIPGFRPGKAPLNMVEKVLGD 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S++ + + ++ + + ++ K + + P + + K + +YD
Sbjct: 61 SVMDDAANIMLNQAMADLFDKLEHKPIRLPQFQMET---------FDKNTGAKAKATYDT 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ + +++ ++ + +I +++ I KN +KE + ++
Sbjct: 112 KPEVTLPKLKKIKIQPKEIKISDADIQKELEGIQKNMARNSLKEESEPVEAADLLEINYK 171
Query: 181 VDNVILEDQSKKNV-QFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS-IKDLAGK 238
E + +F +G+ L+G+K + KE +P+ + + AGK
Sbjct: 172 FKETGKEYPEQNQTGKFQMGAPQNPPGFETNLLGMKLNETKEFTFTYPDVYPASPESAGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGF-ESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ V+ +N+D A + + ++ +++ + + ++
Sbjct: 232 SIIYTVTVTAVYKVTYPEINDDFASEVDGSANLQELKDKTKKQLVEIFGNALTKRATDDA 291
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHML 353
+ I + F +PESL+ E + + E + ++E + +
Sbjct: 292 YNEIIKESKFIIPESLIVEETETVFKNFMREFGLPVTSLSDYAKRLGKEEKEVRESFSKA 351
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A++R+ T I+ I + + I+++EEE+++ ++ + + QK A R
Sbjct: 352 AEKRIQTYILKQKIADDHKIQISEEEVEAGYEKEATAQGIPAETLKKEVQK-QKAETYYR 410
Query: 414 APIFEDKVIDHILKSV-QIVDRKVTFDQLFDNSSESSP 450
DK+ + + V + + ++ ++ S
Sbjct: 411 DKFLFDKIDEFVYAEVEKKSPKAISTEEAEKILSGKEE 448
>gi|284931451|gb|ADC31389.1| Trigger factor [Mycoplasma gallisepticum str. F]
Length = 443
Score = 133 bits (333), Expect = 7e-29, Method: Composition-based stats.
Identities = 71/442 (16%), Positives = 181/442 (40%), Gaps = 20/442 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
++ EK + K + + + +++ +++ I+GFR G VP +
Sbjct: 3 KIREKTNADHKVKYIIDVNEKNWNEAYQKKLNAAVKNVKIQGFRKGHVPYQEAIKHIDQI 62
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ ++++++ I E++ + + E+ S + L L S++
Sbjct: 63 GLFDRAVNQLVQPIYLELVKQEKIK-----DSETVLEENPEVSVVEIDDKKLALSYSFET 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYT 178
+P++++ + + V ++++ ++ I K+ K+ + E GD +D++
Sbjct: 118 IPEVKVGDYLKINGFLSETPVKDEDVQTELVRIFKSAGKLVDKKEGATLEKGDIAFLDFS 177
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+DN E KN + +GS + +VG+K G+++++ FP+D+ K AGK
Sbjct: 178 GEIDNKAFEGGKAKNYELEIGSNSFIPGFEDQMVGMKVGEKRDLNLTFPKDYHEKTYAGK 237
Query: 239 KVRLNFSIKEVFSPLPVVVNND---LAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
V + + + + ++ +++ + +++ + + Q
Sbjct: 238 PVLFKVKLNSIKEVQLPEMTVEKLNELMKTKYKNLDEAKEDIKKRMDRSQQEHANQMNTM 297
Query: 296 QILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHM-- 352
+ + + F +P+SL++ E N + Q+ +M ++ I + + +
Sbjct: 298 LLTQFANEDCQFSHIPKSLLDREVNLLYQQFANQMQQIKMSVEDALKIQNQTKEQLYQRL 357
Query: 353 --LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN--- 407
A R + +VL IG+ I V+E E+ + +++ +++ + + N
Sbjct: 358 TEQATRAIKLVLVLEEIGDLEKISVSEAEINQEIEERIKEISNNQELPKEQYDAIKNYFV 417
Query: 408 -ALAELRAPIFEDKVIDHILKS 428
+ + + KV+D I+K
Sbjct: 418 TQKELIESMLTNKKVVDLIIKK 439
>gi|254363081|ref|ZP_04979140.1| peptidylprolyl isomerase [Mannheimia haemolytica PHL213]
gi|153094746|gb|EDN75536.1| peptidylprolyl isomerase [Mannheimia haemolytica PHL213]
Length = 309
Score = 133 bits (333), Expect = 8e-29, Method: Composition-based stats.
Identities = 58/316 (18%), Positives = 147/316 (46%), Gaps = 8/316 (2%)
Query: 133 QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKK 192
+V + + E+ + ++D+ + + K + + ++ +VT+D+ SVD E
Sbjct: 1 EVEKPVVEIADADLDKMVDVLRKQQATWSESQEAAKAESRVTIDFVGSVDGEEFEGGKAS 60
Query: 193 NVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSP 252
+ +G + + +VG K G+Q +I+ FPE++ ++L GK + ++K+V
Sbjct: 61 DFVLFMGQGRMIPGFEDGIVGRKAGEQFDIDVTFPEEYHAENLKGKAAKFAITLKKVEEM 120
Query: 253 LPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPE 311
+ + + + +S +R + +++ + V +VK Q+++ + + +VP
Sbjct: 121 VLPELTEEFVKKFGNAKSVEELRAEIKKNMQRELKNAVTSRVKTQVINGLIAQNDVEVPA 180
Query: 312 SLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKN 371
+ VE E N + Q+ + + + + + AKRRV G++L +I N
Sbjct: 181 AAVEEEINVLRQQAVQRFGGKPEMAAQL------PAELFEAEAKRRVQVGLLLSSIIGSN 234
Query: 372 NIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQI 431
++V E+ ++ + + +++ H+ K +R + E++ +D +L ++
Sbjct: 235 ELKVDEKRVEEMIADIASAY-EQPAEVVAHYAKNRQLTENIRNVVLEEQAVDAVLAKAKV 293
Query: 432 VDRKVTFDQLFDNSSE 447
++ ++FD++ ++
Sbjct: 294 TEKTMSFDEVMSQQAQ 309
>gi|210634108|ref|ZP_03297996.1| hypothetical protein COLSTE_01914 [Collinsella stercoris DSM 13279]
gi|210158959|gb|EEA89930.1| hypothetical protein COLSTE_01914 [Collinsella stercoris DSM 13279]
Length = 431
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 82/441 (18%), Positives = 160/441 (36%), Gaps = 29/441 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + K V IP+ + + ++ K GFR GK P I S GK
Sbjct: 1 MNITSEVKDA-KLTATVTIPAADVDAVIKKAYKEAAKKYRFPGFRAGKAPRPVIDSALGK 59
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L++ +E+I +L++ D + L D + +
Sbjct: 60 EAVLAQATNELIGSNEGNVLNELDIVPV--------KEGDYQQIDLCADGTDYTYTVEFT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P +SS+D +++ EV E EID+Q+ + + FE E E D VTVD
Sbjct: 112 LRPAPALSSYDAVEIEMPPAEVTEAEIDQQVDMLMGYHATFEDVERAVEGSDYVTVDIKN 171
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
L + +GS +L E E L+G+ + K I + + +
Sbjct: 172 VKGAEALAG---EGRMIAMGSGNLPKEFDEGLLGMNVDETKTISWTPEVEGAE------E 222
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++K V + ++ A F+ AMR +I+ + Q + + +
Sbjct: 223 ASVEVTVKGVKERKLPELTDEFAKTNFGFDGIDAMRDAVKLEIESDKSSQLPQLKENRAV 282
Query: 299 DYISNK-----YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
++ + D +S+ + LQ + S + Q +E + H
Sbjct: 283 SKLAERLELDEMDEDYEQSVFQELGQNFLQSLSARGMSLDGWLQANRISSDEFISDLHRQ 342
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A + L + + +EVTEE++ R + + +R
Sbjct: 343 ANDVARESLALDALARELKVEVTEEDVDGEFE----RAGVENVEASKAQFLADGRMPAIR 398
Query: 414 APIFEDKVIDHILKSVQIVDR 434
I K +D ++++ ++ +
Sbjct: 399 DSIRRSKAVDWLVENAKVTEV 419
>gi|308446480|ref|XP_003087189.1| hypothetical protein CRE_23294 [Caenorhabditis remanei]
gi|308260042|gb|EFP03995.1| hypothetical protein CRE_23294 [Caenorhabditis remanei]
Length = 355
Score = 132 bits (332), Expect = 9e-29, Method: Composition-based stats.
Identities = 63/347 (18%), Positives = 157/347 (45%), Gaps = 6/347 (1%)
Query: 103 SGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV 162
+ L + + ++ P++E + L+V++ EV +K++D + + K +
Sbjct: 5 DKVENKDDALVYQATVEVYPEVEAKF-EGLEVSRKSSEVTDKDVDAMLENLQKQRAEWTE 63
Query: 163 KETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEI 222
+ ++ +VT D+ +VD E + ++ + ++GS + + +VG+K G++K I
Sbjct: 64 TKGMAKKDMQVTFDFEGTVDGEKFEGGAAEDFKLVLGSGRMIPGFEDGIVGMKKGEEKVI 123
Query: 223 ERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQ 279
+ FPED+ ++LAGK + ++K V ++ + G E ++ +
Sbjct: 124 DVTFPEDYQAENLAGKAAQFKITVKLVEKQKLPEIDAEFLKIFGLTEEEGVEKLKADVRK 183
Query: 280 KIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-NQKSQN 338
+++ + +R +VK D + +VPES++ E + Q++ + + +
Sbjct: 184 NMEREVKNGLRNQVKGATFDALVAANDVEVPESMLAQEIDRQRQQMIQQFTQQFGAQGAK 243
Query: 339 VDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKM 398
+ + A++ V G+++ + +EV + + + + + ++
Sbjct: 244 AFDSSMLPDELFKEQAEKAVKLGVLVSKVLADAKLEVDQSRVDAYIEDMASSY-EDPTEV 302
Query: 399 LDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
+++F+ A++ + ED+V+DHIL + ++ D V++ L
Sbjct: 303 IEYFKTDKQQRAQIEGVVLEDQVVDHILAAAKVTDEVVSYQDLLKEQ 349
>gi|313204336|ref|YP_004042993.1| trigger factor [Paludibacter propionicigenes WB4]
gi|312443652|gb|ADQ80008.1| trigger factor [Paludibacter propionicigenes WB4]
Length = 451
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 63/463 (13%), Positives = 157/463 (33%), Gaps = 37/463 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M ++ K + + + I + ++ + D R KANI GFRPG VP+ +K +YGK
Sbjct: 1 MNIVRKDLDQNNAIVTLRIEKVDYAEKVDKTLRDYRKKANIPGFRPGMVPVGLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L++ I++++ + + + + + P E + + + + I
Sbjct: 61 SVLADEINKLVSDNLYNYIRENNVNILGEPLPNETEQ----KAIDFDTQEEFEFVFDLGI 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E+ +V V ++ ID Q+ + +E E V+
Sbjct: 117 APEFEVELTKKDKVKFYTIAVSDEMIDNQVKSYTGRYGKYVQEEVVEEKDMLKGELLEVA 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD----------QKEIERFFPEDH 230
V ++ + VG K GD + E E
Sbjct: 177 DGKVNESGIKVQDATLTAAYMKD-DAQKALFVGAKKGDVITFNPAKAFESEAEISSLLKI 235
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
S I+ + +N +L ++ E + KIK++ + +
Sbjct: 236 SKDAAKAIDADFQLKIESITRYHESEINQELFDKVYGEGVVSTEEEFRAKIKENIQENLT 295
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
+ + + + + E +A ++ + +
Sbjct: 296 GDSEYKFGLDAQEMLVAKFDNLVFPDTFLKRWVLASNENLTAETLEEDYPKMIADL---- 351
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPG--HEKKMLDHFQK 404
++ + + N+++V +++ + ++ + +++ ++ K
Sbjct: 352 --------KWHLIKDKLAKVNDVKVEATDVEEFAKKMAKAQFAQYGMIGMDDEIIANYAK 403
Query: 405 Y----PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L + + E+KV + +V++ +++V+ ++
Sbjct: 404 DMMKKEETLKNIVDKVAEEKVFAKVKDAVKLENKEVSIEEFNK 446
>gi|269114865|ref|YP_003302628.1| Trigger factor (TF) [Mycoplasma hominis]
gi|268322490|emb|CAX37225.1| Trigger factor (TF) [Mycoplasma hominis ATCC 23114]
Length = 476
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 73/475 (15%), Positives = 182/475 (38%), Gaps = 23/475 (4%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SILSE 65
+ + ++ I + ++ + + +R+ I GFR G VP + +
Sbjct: 6 NKKESELTIEYTIQGEQWENAKEKARKALRANVQIDGFRKGHVPAFEADKRINPIEVYQK 65
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
+D I+ I E+ + + ++ + + P+++
Sbjct: 66 ALDSILDNIY-------KEQIISQITKDDEIVGHANLRIKDINEEKAEISFVFPLFPEVK 118
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ + L V CE+ +K+++ ++IA N V + + D+V ++ +D
Sbjct: 119 LGDYKKLGVKLGSCELTKKDLNDAKSQIASNYVVMLDSKEPIKEKDQVNFNFKGFIDGKP 178
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ +N ++GS + ++GLK G++K+++ FPED+ K+LAGK V +
Sbjct: 179 FDGGEAENFDLVIGSKQFIPGFEDKMIGLKAGEEKDLDLVFPEDYHAKNLAGKSVVFHVK 238
Query: 246 IKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
I V +P ++++ ++ + ++ V+ + + + +S
Sbjct: 239 INFVKTPNYPTIDDNFVKEINLPNVKNVAEFEEYVKFIALKNKLANVKNEFINEAVKKLS 298
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY----YHMLAKRRV 358
+ + ESLVE E + Q + ++ + + + A+ +
Sbjct: 299 EQSEVSLSESLVEEEADKYYQNFLNNLKQQQITEKDYYEFSKSTKEESLNVFKKQAQINL 358
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
VLG I + +++VT E+ + + + + + + + + +
Sbjct: 359 KQMFVLGAIAKAESLKVTLEDYEKEVEKLAKTYGLAPEHVKQILK-----FENVENNLIN 413
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD--KSSKVETFQSEEAPSE 471
+++ + +LK + FD+L E ++ +K + ++E+ E
Sbjct: 414 ERISEILLKENDTKAFE-NFDKLLKEVEEYEAKQTQAIVDEAKRKREEAEKIAKE 467
>gi|308234711|ref|ZP_07665448.1| trigger factor [Gardnerella vaginalis ATCC 14018]
Length = 299
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 50/310 (16%), Positives = 122/310 (39%), Gaps = 13/310 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L + ++ ++I + N+ GFR G VP + G
Sbjct: 1 MKISVRNLEPTKVKLTITADLEDFEPFMDQARKEIAKQINVPGFRKGHVPGKIVDQRVGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E ++ + E+ + L ++ R +P + E + + LK + +
Sbjct: 61 GAVAGEAVNSAVPELYSKALEEKKIRPMDQPEFDVQE-----VPESAKDELKLKFVATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P+ +++ F +++ + EV +++++ ++ + + + ++ GD +D
Sbjct: 116 RRPEFKLNKFKGVEIEVEKPEVTDEDVNARLEALRQRFGTLVGVDRPAKKGDFANIDLEA 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+D+ S+ V + +GS + E L GL G++ E GKK
Sbjct: 176 RIDDE--VADSQNGVSYELGSNTMLDGLDEALEGLSAGEETTFEGTLEAG----KNQGKK 229
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + V + +N+D A F++ ++ + +Q +E + +
Sbjct: 230 AQVKVKVNSVKTQELPELNDDFAQEASEFDTFEELKADVRKSCEQANEGRQATMARDAFI 289
Query: 299 DYISNKYTFD 308
I +
Sbjct: 290 AKIQEEVEIP 299
>gi|298373622|ref|ZP_06983611.1| trigger factor [Bacteroidetes oral taxon 274 str. F0058]
gi|298274674|gb|EFI16226.1| trigger factor [Bacteroidetes oral taxon 274 str. F0058]
Length = 448
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 72/467 (15%), Positives = 159/467 (34%), Gaps = 40/467 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M ++ + L + I + ++ I+D R K + GFRPG VP+ IK +YG+
Sbjct: 1 MNIVRNDVDACNATLTLTIDKQDYEEKVDKAIKDYRRKVQMPGFRPGNVPVGLIKKMYGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SIL+E +++II E + + P E+ + + +
Sbjct: 61 SILAEEVNKIISESLYNYIKDNKIDILGEP----ISNETIQKPIDFDTDETFEFVFDIGL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ I++ ++ V ++ +D + A + E E ++
Sbjct: 117 TPELTINTTAKDKIPYYTIAVTDEMVDEHVNMHASRLGQYVPAEKTEENSVIKGEMTEIT 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTG----------DQKEIERFFPEDH 230
L+ I + ++ VG K G E +
Sbjct: 177 DSVEPLKVLEA----IITPKFIKDDKQKKLFVGKKKGAKIKFNPVAAMSNNYEVASLLNV 232
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
+ + IKE+ + ++ L ++ E QK+K+ E +
Sbjct: 233 DRDKVKEYDHDFEYVIKEITNHQSAELDQSLFDKVMGEGTVKSLEEFKQKVKEGIERVYV 292
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
+ + + +++ E+ KV E + ++ D + E
Sbjct: 293 ADSDYRFGIDARDFFIKKNKKAVFPEEFLKRWLKVTNEKMTDETIEKDFDRMLEYL---- 348
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGHEKK------MLD 400
I+ EK I++ +++++ A Q + ++ + + ++
Sbjct: 349 --------KWDIIKKLFVEKYEIKIEDKDVREAARQDVLMRFAQYGINNPQDDILNTYVE 400
Query: 401 HFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
K A+ + E VI I ++V + ++VT ++ +E
Sbjct: 401 ESLKQKGAVEQFYQQAVEKTVIAKIKENVALNPKEVTMEEFNKLFAE 447
>gi|197294734|ref|YP_001799275.1| Trigger factor (TF) [Candidatus Phytoplasma australiense]
gi|171854061|emb|CAM12034.1| Trigger factor (TF) [Candidatus Phytoplasma australiense]
Length = 428
Score = 132 bits (331), Expect = 1e-28, Method: Composition-based stats.
Identities = 81/438 (18%), Positives = 188/438 (42%), Gaps = 22/438 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + E ++ V+ + L E I+ K +KGFR G VP ++ +GK
Sbjct: 1 MEIKKINDEKIQCGFKVL--TEELEHHLTLAYEQIKHKVEVKGFRKGHVPRKIFETRFGK 58
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + +++I++ E L+K+ P I + + D L ++
Sbjct: 59 EELYNNALEKIVQNKYKEALAKKTFENMGMPKI------VGLEEKNFKEKKDFHFNLEFN 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYT 178
+ P++ + S+ +++++ E+ ++EI+ Q+ + + K + + D D+
Sbjct: 113 LKPKVVLGSYLGIKLSKGDLEITKEEINTQIDSLLDSKKKLVPKNSNVLKNNDTAIFDFE 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D+ E S KN +GS E ++G+K + K I FP D+ DLA K
Sbjct: 173 GFIDDKPFEGGSAKNFSLEIGSKKFVPGFEEQMIGMKKEETKNITITFPNDYPKSDLANK 232
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K ++ ++ + + + N+L V ++ ++ ++++ + E +++V++
Sbjct: 233 KAIFKVTLHDLKTKVKPELTNELVVSLQYPEIKTVEELQTKVTEELTKQKEQQNKRRVEK 292
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYH 351
++LD I +P +L+E E I K + ++ + S +E+ Q +H
Sbjct: 293 EVLDKIKQNTQLTIPLTLIEEEKKDIKNKFQAQLQKQKLTLEQYQSYLGITEEKMEQNWH 352
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
AK + +++ + + I V E+++ +++ + L
Sbjct: 353 EEAKNNLEYQLIMEQVALQEKITVNPEKIEQCYKDLSQMHQMSLEQVKQNLD-----LEV 407
Query: 412 LRAPIFEDKVIDHILKSV 429
L+ + D+ + ++K+V
Sbjct: 408 LKQNLLLDEAWELVMKNV 425
>gi|288800852|ref|ZP_06406309.1| trigger factor [Prevotella sp. oral taxon 299 str. F0039]
gi|288332313|gb|EFC70794.1| trigger factor [Prevotella sp. oral taxon 299 str. F0039]
Length = 452
Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 62/464 (13%), Positives = 162/464 (34%), Gaps = 38/464 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + + + + +I+ + + + ++D R +ANI GFR G P+ IK YG+
Sbjct: 1 MKVSFENQDKVNGLMTIIVEESDYKEKVEKSLKDYRKQANIPGFRKGMAPMGLIKKQYGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + I++++ E + + + P + + D +E +
Sbjct: 61 YLKLDAINKVVGEELYKYIKDNKINMLGEPLPSAKQEAQD-----LEKEPPYTFYFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++ +VD+ +D+Q+ A + E + +
Sbjct: 116 APELKVELTSKDKLPYYDIKVDDATVDKQVDIFASRTGQYIKAEEYQKNDMLKGDLRELD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD-----------QKEIERFFPED 229
E ++ + ++ K GD + E
Sbjct: 176 EKGNTKEGGITLEASVMMPEFIKVEDQRKLFDNAKLGDVIVFNPRKAYPDNDSEIAALLK 235
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+++A + ++ I E+ VN L ++ E E KI + +
Sbjct: 236 VKREEVAQHEGDFSYQITEISRFEKAEVNQALFDQIYGEGEVKSLEEFRTKIAEGIKEQT 295
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ L + + V + +E + N EE ++
Sbjct: 296 VTDCDYKFLLDVRSYLEGKVGKLTFPDETLKRV------------MLLNNKERGEEFVEK 343
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFPGH--EKKMLDHF- 402
+ + +++ ++ + E N +++ +++++ A + ++ ++ +D++
Sbjct: 344 NYEASIQQLTWHLIKEQLVEANKVKIEDKDVREAAKETARIQFAQYGMIQVPEEYVDNYV 403
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
K + + K+I+ + K V + ++VT D+
Sbjct: 404 TEMFKKKENVDAFVDRAVDLKLIEALKKVVTLETKEVTLDEFNK 447
>gi|333029345|ref|ZP_08457406.1| trigger factor [Bacteroides coprosuis DSM 18011]
gi|332739942|gb|EGJ70424.1| trigger factor [Bacteroides coprosuis DSM 18011]
Length = 452
Score = 132 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 64/457 (14%), Positives = 167/457 (36%), Gaps = 15/457 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + + L V + ++ ++ +++ R +A + GFR G VP IK +YGK
Sbjct: 1 MNVSLQNIDKVSALLTVKLEKADYQENVDKTLKNFRKQAQVPGFRKGMVPAGLIKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S ++E +++++ E + + + P + T E + + +
Sbjct: 61 SAVAEEVNKLLSEKIYGYIKDNNLNILGEPLPNEEKQ----TPIDFETMEEFEFVFDIAL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I+ D++V +I +V E+ ++ Q+ + ++E E + V+
Sbjct: 117 APEIKAEISKDVKVGYNIIDVTEEMVNSQVEVHTQRTGSYEQVEEYQDKDMLKGAIAEVN 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
I K + ++ + + + K D +++ ++A +
Sbjct: 177 EKGNIKRTGIKADDVVLMPAYMKDEDQKALFKDAKVKDNIIFNPGKAYENNAAEIA-SLL 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++ E ++ + + + + SE R ++K I
Sbjct: 236 KIEKEEVENLDSDFKFQITEITRFVAGPINQELFDQVYGEGEIKSEEEFRARIKADIEKQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
S + L E + + N + DE+ ++ + + +
Sbjct: 296 FSLDSNYRFLLDLREVLIKNEGEIQYPDAILKRLMLLNNEGKDEKFVEENYDKSIEELTW 355
Query: 361 GIVLGTIGEKNNIEVTEEEMQSAL----YQQLGRFPGH--EKKMLDHF----QKYPNALA 410
I+ + ++N ++V E+E++ Q ++ + +L+++ K +
Sbjct: 356 HIIKEKLVKENEVKVEEDEVKEMARAATRAQFAQYGMTQVPEDLLENYVGEMMKNRQTVD 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
L + E K+ + + V + ++ V+ ++ +
Sbjct: 416 SLVNRVVETKLAEALKDKVTLENKTVSIEEFNKLFEK 452
>gi|325104590|ref|YP_004274244.1| trigger factor [Pedobacter saltans DSM 12145]
gi|324973438|gb|ADY52422.1| trigger factor [Pedobacter saltans DSM 12145]
Length = 447
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 67/451 (14%), Positives = 150/451 (33%), Gaps = 19/451 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ L + V I + I+D KA + GFRPG VP +HIK +YGK
Sbjct: 1 MNITQEKIGDLNAIVTVKISPEDYQAKVEKAIKDQAKKAKLPGFRPGMVPPAHIKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SIL + I+ ++ E V + + + + +P + D T+ + + +
Sbjct: 61 SILVDEINNLLSESVNNYIQENNLQILGQPL-----PKEDDTAFKWDFNDEFVFNYELGL 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I I ++ +VD++ ++ ++ I ++ E ++
Sbjct: 116 APEINIEFNSKDKLVSYDIKVDDETLNSRIKNIRRSYGKMTNPEVVEAGDVIFGDLVELN 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D E K + + + + L+GLK D E + + L
Sbjct: 176 DDGSEKEGGVKTTTSLRLEIVE--DKAQKKLIGLKKDDVVESFDLVKAINDDEQLRRILK 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ V N + +E + K+ ++
Sbjct: 234 LEEGTESPKGKFKLTVKNVNRLEEADLN--QEFYDKLFGADAVKTEEEFKAKIAEEVGAM 291
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
++ + L + + + + +E+L + + +
Sbjct: 292 VAQDADRKLAADLYQYGSEKTAKIALPDEFLKRWLKVVNKELSDEELDKGYEDFAKNLKW 351
Query: 361 GIVLGTIGEKNNIEVTEEEM----QSALYQQLGRF------PGHEKKMLDHFQKYPNALA 410
+V I + NN+E+ EE+ + L Q + + F +
Sbjct: 352 TLVENKIVKDNNLEIKYEEVLETAKQRLDAQFRMYSPQALTEEQLNQYAVQFLQEKENAN 411
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ + KV D++ + + +++ + +
Sbjct: 412 RIFDEVRAQKVFDYLKNVITLDKKEIDYTKF 442
>gi|757797|emb|CAA59930.1| tig larger protein [Campylobacter jejuni]
Length = 410
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 81/412 (19%), Positives = 168/412 (40%), Gaps = 21/412 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + V IPS + + + GFRPGKVP+S + Y +
Sbjct: 1 MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYER 60
Query: 61 SILSETIDEIIKEIVPEILSK---RDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ + + K V L + ++ P ++ L
Sbjct: 61 ELSQDAEQNLFKSAVNSALQELKKENKELVGEPYFE----------KFDRKDGEIIAELI 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTV 175
P+I++ ++ L +V +KEID + E+ K E +T+ + GD
Sbjct: 111 LSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKRALKEGDFAKF 170
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D+ VD+ E +N +GS + +VG+K G++K+I+ FP+++ + L
Sbjct: 171 DFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGARHL 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----R 290
AGK + E+ +++++ +L E A + +K+K+ +
Sbjct: 231 AGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVN 290
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQY 349
++K + D + KY FD+P+ +VE E + ++ + + +E
Sbjct: 291 DELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFCEKEIEELKASKEKYQEKRDS 350
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDH 401
+ A++ V ++ + + IEV ++E+ A+Y + R+ ++ ++
Sbjct: 351 FKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMIQRAFRNY 402
>gi|110004431|emb|CAK98769.1| putative trigger factor containing peptidyl-prolyl isomerase domain
protein [Spiroplasma citri]
Length = 431
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 84/441 (19%), Positives = 172/441 (39%), Gaps = 26/441 (5%)
Query: 1 MQVIEKFS-EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M+ + + + VII TD + + + + GFR GKVP +K
Sbjct: 1 MKFKAEKIQDKGIGKWYVIIDGTEWTDYIQKAEKKAAEQLEVPGFRKGKVPTDLVKKHLT 60
Query: 60 KS-ILSETIDEIIKEIVPEILSKR-DERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
++ IL ++ + ++ D P ++ + + L+L
Sbjct: 61 EAKILDAAHHLVVNKAYKFAFDQKSDIEPFSSPVPSVQKI----------SKTEYILQLE 110
Query: 118 YDILPQIEISSFDDL---QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVT 174
+D+ P+++IS + Q+ + EV + EI+ + ++ V F+ K TE GD V
Sbjct: 111 FDLKPEVKISKYTSFTDKQLKKTKIEVKKAEIEDNINQLRNRFVIFKPKITEITTGDTVI 170
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
D+ VD + + +GS + ++GLKTGD+KEI FP D+ +++
Sbjct: 171 FDFEGFVDGKPFKGGKATDFTLEIGSGQFIPGFEDAMIGLKTGDKKEINVTFPADYHVEE 230
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLG---FESESAMRGLCSQKIKQHSEFLVRQ 291
L +IKEV + +N++LA + ++ + + I +
Sbjct: 231 LKATPAIFKLNIKEVKTKELPELNDELAKDVNLKGIDTLAKLEVHVKNNIYEQLLKQEYD 290
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDL 347
+ I+ +PES++ E N + + ++ + +E+
Sbjct: 291 HFIGNLFRLIAKDSKIALPESIIRKEANQLKHEFEQKLQGQQLDMKTYKKRTGMSEEDIF 350
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
AK R+ G+++ + + NI TE E+ + +F K + +
Sbjct: 351 NELFKDAKNRLENGVIVDAVVQNENITATEAEIVEQYEKLGKQFGIDGKTLKETKLVSDQ 410
Query: 408 ALAELRAPIFEDKVIDHILKS 428
+++ + DKV + ++
Sbjct: 411 ---QVKEQVIHDKVFAFLYQN 428
>gi|300728340|ref|ZP_07061705.1| trigger factor [Prevotella bryantii B14]
gi|299774405|gb|EFI71032.1| trigger factor [Prevotella bryantii B14]
Length = 451
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 64/468 (13%), Positives = 165/468 (35%), Gaps = 38/468 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + L + + ++ + ++ R KANI GFRPG+VP+S +K +G
Sbjct: 1 MKISFENPDKVNGLLTLTVEEADYKENVEKTLKSYRKKANIPGFRPGQVPMSLVKRQFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + I++ + E + + + + P + + D +E +
Sbjct: 61 SVKMDEINKFVGEQIYKYVQDNKIQMLGEPLPSEKQERQD-----LENESTFTFVFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ ++S +V VD+K ID+Q+ ++E E+ + +
Sbjct: 116 APEFKVSLTGRDKVDYYTITVDDKLIDQQVEMFTSRMGSYEKAESYEDNDILKGDLRELD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG--- 237
+ E+ ++ S E + G K GD + ++A
Sbjct: 176 ENGNTKEEGITVEAASVMPSYIKVEEQKNLFNGAKVGDIITFNPKKAYPENDAEIASLLK 235
Query: 238 --------KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+F + E+ V+ +L + E E +KI + + +
Sbjct: 236 IDREAAKEANADFSFQVTEISRFKKHAVDQELFDQTFGEGEVKDEKAFREKIAEGLKEQL 295
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ + + + V + + + + E+ ++
Sbjct: 296 QADQDFKFIQDVRAHCEKKVGKLEFPDALLKRIMLNSNQDKG------------EKFVED 343
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF- 402
+ + + + ++ + NI++ + +++ + Q ++ ++ L+++
Sbjct: 344 NYENSIKELKWHLIKEQLVAAQNIKIDDADIKETAMEAARAQFAQYGMTNIPEEYLENYA 403
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
K N+ L + K+ + V++ ++V+ + SE
Sbjct: 404 NEILKQKNSADALVDRSIDRKLSAVLKTVVKLNQKEVSVEDFNKMMSE 451
>gi|332664757|ref|YP_004447545.1| trigger factor [Haliscomenobacter hydrossis DSM 1100]
gi|332333571|gb|AEE50672.1| trigger factor [Haliscomenobacter hydrossis DSM 1100]
Length = 471
Score = 131 bits (328), Expect = 3e-28, Method: Composition-based stats.
Identities = 66/476 (13%), Positives = 167/476 (35%), Gaps = 18/476 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
V+ + + L L + + + + + R KA +KGFR GK P ++ LYGK
Sbjct: 3 NVVREEIDNLNSVLTITLEKAEVENKLKSELAKYREKAQMKGFRKGKTPDGMLRKLYGKG 62
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+L++ +++ ++ + + + + +P + N E D+ + D + +
Sbjct: 63 LLADIVNDSLQRQLYDHIIENKLEVLGQPLPSENHPEVDLDPIQV---TDYIFKFDLGLA 119
Query: 122 PQIEISSFDDLQV-TQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ EI D V + E+ ++ ++ ++ + K V E E + D + +
Sbjct: 120 PEFEIKGLDASSVYEKYAVEISDERVEEELLKARKRFGKRIVSEAEIQAEDMLKLQLVEL 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ E + N ++ +A+ IL+ K GD +++ F E +D +
Sbjct: 180 DGDSAKEGGIEHNFSLLLDNAE--DGAKAILLSHKVGDTLKMDVFALEKDRDEDF--VRR 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
KE + V + M ++ I
Sbjct: 236 YFLGLEKEDEREINERVFQITIEEASRIESAEMGEEFYNTYFGEGRVSNEEEAYAAIRKD 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSS---ANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ L + +L++ + + + ++ E ++ +
Sbjct: 296 YGQFFDQQANALLFRDLQEKLLEENQLPLPGAFLKRWVLASNENATPESVEKGFESFTKS 355
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKK------MLDHFQKYPNALA 410
+ ++ + I+VTE+++++ ++ + G M++ + +
Sbjct: 356 LQWSLIRNKAARQFGIQVTEDDLKAYFANRVLSYFGGQLNDMTLINGMVERLLQDEKQVD 415
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
+ + DK+ I V I + + ++ + ++ E ++ + E
Sbjct: 416 QAGDEVLLDKLQAAINAVVTINLKPIPEEEFVEIIRQAQVEAQTQQAEADILGEEE 471
>gi|224532164|ref|ZP_03672796.1| trigger factor [Borrelia valaisiana VS116]
gi|224511629|gb|EEF82035.1| trigger factor [Borrelia valaisiana VS116]
Length = 452
Score = 130 bits (327), Expect = 3e-28, Method: Composition-based stats.
Identities = 86/447 (19%), Positives = 196/447 (43%), Gaps = 14/447 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
K G K E+ + + N + + +N ++D S+ I+GFR GKVP+S I+S Y + + +
Sbjct: 7 IKLLPGSKVEVIIKVSKNVIREKYNLLLQDYSSRLKIQGFRIGKVPISIIESKYSEGLRA 66
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++E++ + E + + S TI E + + D + Y+ P+
Sbjct: 67 TVLEEVVNNSLKEFFKEESKMPLSYVSPTIKE-----KNLKLNLDKDFEFTFVYETYPEF 121
Query: 125 EISSFDDLQVTQDICEVD--EKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVD 182
+I SF+D+ + +I EV + +ID ++ + N E D + V +D
Sbjct: 122 KIPSFNDIDIKVEIPEVFIDDSDIDNEIKRLQIENSIIIEDEEGIVKKDSIVKVDFVELD 181
Query: 183 NVILEDQSKKNVQFIV--GSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+V+ E S K F+ G ++ + + +VG+K +++ IE+ + D+ ++LAG
Sbjct: 182 DVLNEIVSTKRQDFVFTVGKSETYYDFDRDIVGMKINEERLIEKSYVTDYKFEELAGSSR 241
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+L IK + +++++ A + + ++ I E +
Sbjct: 242 KLKIKIKSIKKRDLPLIDDEFAKDISDRYNTLDDLKNFIRSNILDLIEEKKEALKLNKFF 301
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED-LQYYHMLAKRR 357
IS K D+P S++E E + + + + ++ +++ +
Sbjct: 302 STISEKLEIDIPRSMIEAEIEIAFKDIAKQNKMSLEEFKSIFYSSGYVGGKNLKDEILSN 361
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + +++ + + + IEVTE +++ + +Q +++ + + N ++ L+ I
Sbjct: 362 LKSKLIIQKMVDLDPIEVTESDLKDEMTKQSENSGASYEEIKKFY-EDQNLISYLKDDIK 420
Query: 418 EDKVIDHILKSVQ-IVDRKVTFDQLFD 443
+V IL +++ + ++V F +
Sbjct: 421 RKRVKKKILANLKEVKGKQVFFKDFVN 447
>gi|325282125|ref|YP_004254667.1| trigger factor [Odoribacter splanchnicus DSM 20712]
gi|324313934|gb|ADY34487.1| trigger factor [Odoribacter splanchnicus DSM 20712]
Length = 450
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 62/453 (13%), Positives = 147/453 (32%), Gaps = 17/453 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + + + + ++D + K + GFRPGK P+ +K +YGK
Sbjct: 1 MNITKNQIDDLNATIKIELGKEDYAGRVEKALKDYQKKVVVNGFRPGKTPMGIVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L + I++++ E + + + + + P E L + + +
Sbjct: 61 SLLVDEINKVLGESLNNYIKENNLQILGEPLPNETEQ-----KELNLEDENFEFLYDIAL 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++ ++ +VD++ ID+Q+ I KNN + +
Sbjct: 116 SPEVNAKMSKREKIPFYTIKVDDEMIDKQIESICKNNGNMIAVDEIEGTEYLKGELIELD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
D + E K + E G K G++ + + + K +
Sbjct: 176 ADGNVKEGGIKNEDASMSVFHMKDEEAVNAFKGKKAGEEVKFNAV--KAYPNKTDFAAML 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ E + ++ + E + + R +VK I +
Sbjct: 234 GVTKEEAEHAGENYCFIVKEIKRYIDAEVNEELFTKLYGEGVVKDAADFRNRVKADIENQ 293
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + E V E + + E+++ +
Sbjct: 294 LKGHSEYRFTIDAKEKLIKKNEDVVLPETFLKRWIVAVNEKMTPEEVEKDFEGYRDEFKW 353
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQL----GRFP------GHEKKMLDHFQKYPNALA 410
+V I + +++V E+M+ Q ++ +
Sbjct: 354 QLVKSAIVKDYDVKVEAEDMKREGRQIAAAQLQQYGLYGLTDEQLDGFAAKLLEDEKQRQ 413
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
L ++KV D I ++V++ +++++
Sbjct: 414 HLYERALDNKVFDVIRENVKLEEQEISMADFEK 446
>gi|240047182|ref|YP_002960570.1| trigger factor [Mycoplasma conjunctivae HRC/581]
gi|239984754|emb|CAT04728.1| Trigger factor [Mycoplasma conjunctivae]
Length = 434
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 65/442 (14%), Positives = 168/442 (38%), Gaps = 20/442 (4%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
E + + ++ + PS+R N+ + + SK IKGFR GKVP+ ++ +
Sbjct: 5 ELLKDTAELKISISAPSDRWESVLNKAEKKLISKVQIKGFRKGKVPVDKARAFIDPA--- 61
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
++++ + I+ + + + + + + +L++ Y + P+I
Sbjct: 62 ----KLLELAIQYIIPELETESRTNIMDDDQVIDGPVYNIAKVSKDELEIEFLYPVYPEI 117
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNV 184
++ + L+ + V ++++ Q+ ++ + + + E D + D+ ++N
Sbjct: 118 KLPDYKKLKTKYQVDPVSKEDVQAQIDKLLQTRGTYSDVDGPIEKNDVINFDFKGFIENE 177
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
E + +GS E L+GLK ++K+I FP+++ + A K+
Sbjct: 178 AFEGGEASDFDLKIGSGQFIPGFEEQLIGLKKEEEKDIIVTFPKEYHVPAFANKEATFKV 237
Query: 245 SIKEVFSPLPVVVNN---DLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
I ++ P ++N + + S + K+ + R + R ++ +
Sbjct: 238 KINKIKRNTPAELSNKFVEDLKIPNVTTISQLEDYLEDLTKRENVEKSRVEFSRAAIEEL 297
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLAKRR 357
++ + + L+ NE + + + + + ++ A +
Sbjct: 298 GSQVSLPISTKLLGNEMQRLSDTFKQTLKTQGFTLEEYLRVTKFTTQDIDDQVKTEATKL 357
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + I ++ + T+EE+ L + + H L +L I
Sbjct: 358 LKNAFIYAEIAKQEALVPTDEEINQYLENLSKLSGRSIEDLKTHVS-----LKDLHIEIT 412
Query: 418 EDKVIDHILK-SVQIVDRKVTF 438
KV+D +++ + + +
Sbjct: 413 NRKVLDKLIEYNSKATKETKSK 434
>gi|227538275|ref|ZP_03968324.1| FKBP family peptidyl-prolyl cis-transisomerase (trigger factor)
[Sphingobacterium spiritivorum ATCC 33300]
gi|227241790|gb|EEI91805.1| FKBP family peptidyl-prolyl cis-transisomerase (trigger factor)
[Sphingobacterium spiritivorum ATCC 33300]
Length = 441
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 67/459 (14%), Positives = 165/459 (35%), Gaps = 32/459 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + + V + ++ I+D KA + GFRPG VP HI+ YGK
Sbjct: 1 MKVSHKKIDDINANITVDLAPEDYNPQVDKAIKDQAKKAKLPGFRPGMVPTGHIRRTYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SIL + +++++ + + E +S+ +P E + + +
Sbjct: 61 SILFDEVNKVVNDKIAEYISENKLEVLGQPLPVDEEVNYNW-----DFKDSFNFTYEIGL 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E + + T+ + D + ++ ++ + ++ E E
Sbjct: 116 APEFETPFTKETEFTEYDIKADTETLESRIKNLRRSYGKMTNPEVSEEGDVLYATLKQEG 175
Query: 181 VDNVILEDQSKKNVQ---FIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ + + ++ I S + + + +K + + A
Sbjct: 176 EEGIEKTTSVRTDIIEDAKIKKSLSGLKKDDSVKIDVKKAFKAADLARILGITEEEAEAI 235
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K + +N + +L E + +K+ + E L +Q +++
Sbjct: 236 APAKFELTVKNINRLEESELNQEFFDKLFPAGEVTTEEVFKEKVTEEVENLFKQNSAQKL 295
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + + + + + ++ + + N +I E++L+
Sbjct: 296 RNDL-------YTFGMEKVDVKFPEEFLKRWLKATN------PNITEQELEEGFADFINN 342
Query: 358 VLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGHEK-------KMLDHFQKYP 406
+ I+ I NN+EV +E+ + +Y Q+ + +E+ + +
Sbjct: 343 LKWTIIENRIVTANNLEVKYDEVINLAKERIYAQIKMYNINEEPADEQLSQYAIQMLQDR 402
Query: 407 NALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
L KV DH+ V++ +K+ +D+ +
Sbjct: 403 EQANRLFEEAKALKVFDHLKTVVKLKSKKIDYDKFEKLA 441
>gi|282891307|ref|ZP_06299809.1| hypothetical protein pah_c050o085 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498804|gb|EFB41121.1| hypothetical protein pah_c050o085 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 439
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 83/430 (19%), Positives = 175/430 (40%), Gaps = 19/430 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
++ K +G +LDV + ++ E I+ I + ++ GFR GKVP + I +
Sbjct: 26 KISLKKEDGCLVKLDVHVTPQATQAAYQEAIKAISKEVSMPGFRKGKVPSAMILQNFHPH 85
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E D ++ + E + + S+ ++ + + +E DL + ++
Sbjct: 86 VEKEWRDILLNRALREFMDITRIYPFTKESV----QKALVKNVSLEAGADLLI--DFESA 139
Query: 122 PQIEISSFDDLQVTQ-DICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I L++ ++ E +ID+ + + ++ + V V S
Sbjct: 140 PEIPEVDPKSLELKSAQKKDITEADIDKALENVRIHHADWNVVTDRPVQEGDTVVVDACS 199
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V+N + + F V ++ +VG KTG+ E + E V
Sbjct: 200 VENPEQVYYADAS--FKVDEQNMAEWFKTAIVGHKTGESVEAQAADQEP---------PV 248
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +IKE+ + + +N++ A + G ES MR ++ +++E + ++ QI
Sbjct: 249 HVRITIKEIKTAILPELNDEFAKKSGAESLEDMRKKIEDQLNKNAEEESKFVLREQISPI 308
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ KY F+VP S+V+ E I+ + E+ S EE + +
Sbjct: 309 LLEKYPFEVPASIVKQELKRIITQKTEELKETGLSSSEASKKIEEMREQIEKECTDSIRL 368
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
+ + +K N++V++EE+ L+ Q+ ++ G P +R + K
Sbjct: 369 IFLENELIQKFNVQVSDEEVVRELFAQIYKYSGSLTD-ARGLLNSPEMHNRVRQLLMSKK 427
Query: 421 VIDHILKSVQ 430
+ D +++ Q
Sbjct: 428 IKDFLVEQAQ 437
>gi|300769913|ref|ZP_07079792.1| trigger factor [Sphingobacterium spiritivorum ATCC 33861]
gi|300762389|gb|EFK59206.1| trigger factor [Sphingobacterium spiritivorum ATCC 33861]
Length = 441
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 67/459 (14%), Positives = 165/459 (35%), Gaps = 32/459 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + + V + ++ I+D KA + GFRPG VP HI+ YGK
Sbjct: 1 MKVSHKKIDDINANITVDLAPEDYNPQVDKAIKDQAKKAKLPGFRPGMVPTGHIRRTYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SIL + +++++ + + E +S+ +P E + + +
Sbjct: 61 SILFDEVNKVVNDKIAEYISENKLEVLGQPLPIDEEVNYNW-----DFKDSFNFTYEIGL 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ E + + T+ + D + ++ ++ + ++ E E
Sbjct: 116 APEFETPFTKETEFTEYDIKADTETLESRIKNLRRSYGKMTNPEVSEEGDVLYATLKQEG 175
Query: 181 VDNVILEDQSKKNVQ---FIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ + + ++ I S + + + +K + + A
Sbjct: 176 EEGIEKTTSVRTDIIEDAKIKKSLSGLKKDDSVKIDVKKAFKAADLARILGITEEEAEAI 235
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++K + +N + +L E + +K+ + E L +Q +++
Sbjct: 236 APAKFELTVKNINRLEESELNQEFFDKLFPAGEVTTEEVFKEKVTEEVENLFKQNSAQKL 295
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ + + + + + ++ + + N +I E++L+
Sbjct: 296 RNDL-------YTFGMEKVDVKFPEEFLKRWLKATN------PNITEQELEEGFADFINN 342
Query: 358 VLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPGHEK-------KMLDHFQKYP 406
+ I+ I NN+EV +E+ + +Y Q+ + +E+ + +
Sbjct: 343 LKWTIIENRIVTANNLEVKYDEVINLAKERIYAQIKMYNINEEPADEQLSQYAIQMLQDR 402
Query: 407 NALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
L KV DH+ V++ +K+ +D+ +
Sbjct: 403 EQANRLFEEAKALKVFDHLKTVVKLKSKKIDYDKFEKLA 441
>gi|242084612|ref|XP_002442731.1| hypothetical protein SORBIDRAFT_08g001930 [Sorghum bicolor]
gi|241943424|gb|EES16569.1| hypothetical protein SORBIDRAFT_08g001930 [Sorghum bicolor]
Length = 525
Score = 130 bits (325), Expect = 6e-28, Method: Composition-based stats.
Identities = 72/456 (15%), Positives = 176/456 (38%), Gaps = 36/456 (7%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGK-VPLSHIKSLYGKS 61
V E G + V +P++ + D + +++ + + GFRPGK +P + + + G
Sbjct: 76 VTETRQPGSSVKFSVEVPTSIIHDCYQTTLQEYAKRFKVPGFRPGKIIPENILINYVGPQ 135
Query: 62 ILSET-IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + I+ ++K +P+ LS +ER A+ S+ I D+ + + ++ D+
Sbjct: 136 HVQDATIEAVLKHTLPQALSSVEER-ALEDSVRILTQFDDMRNS-FSLDNVFRYDVAVDV 193
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA-------------FEVKETES 167
+P++ S D + + + E+DE + AE ++ +
Sbjct: 194 VPEVRWLSEDKYKNLKVVVEIDEAVDAEKAAEKELQRRHKALGLLRVVADRGLQIGDLVV 253
Query: 168 EIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFP 227
+++ S I +S + +L L+G++ G+ + FP
Sbjct: 254 LDIFADSINSDGSKGEKISSAESTGFHLDTEETNNLVPGFLGSLIGIRPGEARSFPIQFP 313
Query: 228 EDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHS 285
E + L G + KE+F + + LAV+ G + +RG ++ K+
Sbjct: 314 ESFEQESLRGVHAQFTVVCKELFYRELPEMGDSLAVKLLPGCTTIDEVRGRILERCKEVE 373
Query: 286 EFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN------V 339
+ + Q ILD + DVP +L + + + ++ + + ++
Sbjct: 374 KMAIEQATDNAILDQLGKLVEVDVPRALFQEQGQQLYGAKLLQLQAERKLDKDQLASLST 433
Query: 340 DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ---QLGRFPGHEK 396
+ L+ R + + +G + + N++ + E++ + + ++
Sbjct: 434 QRSVQAYLEDEKENITRIIKQMLAVGDVFKSENLQYSTEQLIKEVENSIAEFKQYNQDYD 493
Query: 397 KMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
+ N +++ + KV++ + ++ +
Sbjct: 494 E--------DNIRQQVQDVLEAAKVLEWLKENCTVE 521
>gi|218671996|ref|ZP_03521665.1| trigger factor [Rhizobium etli GR56]
Length = 335
Score = 130 bits (325), Expect = 7e-28, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 143/215 (66%)
Query: 224 RFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQ 283
FP D+ K+LAGK+ + ++K+V +P V +N++LA +LG ES ++ + +I+
Sbjct: 64 VTFPADYPAKNLAGKEATFDITVKDVAAPGKVEINDELASKLGIESADRLKEIVRGQIES 123
Query: 284 HSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID 343
L RQK+KRQILD + Y FD P SLV+ EYNGI +V +++ + + ++ D+ +
Sbjct: 124 QYGSLTRQKLKRQILDQLDEMYKFDTPSSLVDAEYNGIWSQVNNDLAQSGKTFEDEDTTE 183
Query: 344 EEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ 403
E+ + Y LA+RRV G+VL IGEK +EVTE+EMQ A+Y QL ++PG EK++L+ F+
Sbjct: 184 EKAREEYKTLAERRVRLGLVLSEIGEKAGVEVTEDEMQRAIYDQLRQYPGQEKQILEFFR 243
Query: 404 KYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTF 438
P A A +RAPIFE+KVIDH+L + + D+KVT
Sbjct: 244 SQPGAAASIRAPIFEEKVIDHLLTEIDVTDKKVTK 278
>gi|255038321|ref|YP_003088942.1| trigger factor [Dyadobacter fermentans DSM 18053]
gi|254951077|gb|ACT95777.1| trigger factor [Dyadobacter fermentans DSM 18053]
Length = 448
Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats.
Identities = 60/469 (12%), Positives = 148/469 (31%), Gaps = 37/469 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V+ + S L + + ++ I+D + N+KGFRPGKVP I+ +YGK
Sbjct: 1 MEVLLEKSSPTLASLKITLTKEDYQPKVDKTIKDYSKRVNLKGFRPGKVPSHVIQRMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SIL + ++ I+ V + + + P ++ + + I
Sbjct: 61 SILVDEVNNILSTTVSNYIRENKLQVVGDPIPDRDK----AAEVNWDTPSSFEFSYDLGI 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
E++ + V + VD+ E+ + + + + E
Sbjct: 117 ASDFEVNLSELPAVKRYSINVDDNELTKTLDSLRERFADSIHPEVSEAGDMIFGELKQDE 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + + I +K E +D+
Sbjct: 177 FTTRTAIPTKQVKEE-AAAKFIGVKKGDVITFDIKDTFTDESAIAHVTGKKKEDVGEVSG 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRL----GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
++++V P +N + ++ E+E + IK + E ++R
Sbjct: 236 EYTLTVEDVTRSAPATLNQEFFDKVLGPGQVENEEQFNEKVLEIIKSNYERETEAMLRRD 295
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
I + + + ++PE ++N + Q + +
Sbjct: 296 IELALLDSISIELPEEFLKNWLERTNEGKFTREQIDEQFADFA----------------K 339
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLG----------RFPGHEKKMLDHFQKYP 406
+ ++ I +++ ++V E+ + + + ++ +
Sbjct: 340 SLKLSLIKNKIADQSEVKVEYPEILAFTREMVKGQFGIYGDDESMRETIDRVAQGYLADK 399
Query: 407 NALA--ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKL 453
+ +F++KV++ I V ++ V + + +
Sbjct: 400 ERDNYTSVFNQVFDNKVLEVIRGQVSTDEQTVEVSEFEKLAKGEVEAEA 448
>gi|115467746|ref|NP_001057472.1| Os06g0308000 [Oryza sativa Japonica Group]
gi|54291485|dbj|BAD62306.1| trigger factor-like [Oryza sativa Japonica Group]
gi|113595512|dbj|BAF19386.1| Os06g0308000 [Oryza sativa Japonica Group]
gi|125555067|gb|EAZ00673.1| hypothetical protein OsI_22693 [Oryza sativa Indica Group]
gi|125596984|gb|EAZ36764.1| hypothetical protein OsJ_21100 [Oryza sativa Japonica Group]
gi|215704624|dbj|BAG94252.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 537
Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats.
Identities = 69/456 (15%), Positives = 166/456 (36%), Gaps = 36/456 (7%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGK-VPLSHIKSLYGKS 61
V E G + V +P + + +++ + I GFRPGK VP + + + G
Sbjct: 88 VTETLQPGSSVKFSVEVPPSICQQCYETTLQEYAKRFKIPGFRPGKVVPENVLINYVGPK 147
Query: 62 ILSET-IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + ++ I++ +P+ LS ++R A+ S+ I D+ + + +S D+
Sbjct: 148 HVQDATVEAILRHTLPQALSSVEDR-ALEDSVRILTKFEDMANS-FSLDNVFRYDVSVDV 205
Query: 121 LPQIEISSFDDLQVTQDICEVDE------------KEIDRQMAEIAKNNVAFEVKETESE 168
P++ S D + + + E+DE K + + +
Sbjct: 206 APEVRWLSEDKYKNLKVVVEIDEIVDAEKAAEIELKRRHKALGLLRIVADRGLQVGDLVV 265
Query: 169 IGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLF-SETTEILVGLKTGDQKEIERFFP 227
+ + + K + L+G++ G+ + FP
Sbjct: 266 LDIFAESITSDGSKGEKIPSAESKGFHLDTEENNNLVPGFLGSLIGIRPGETRSFPLQFP 325
Query: 228 EDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHS 285
E + L G + + KE+F +++ LA + G + +R Q+ K+
Sbjct: 326 ESFEQESLQGVRAQFTVVCKELFYRELPELDDSLAGKLLPGCTTMDQVRERILQRCKEVE 385
Query: 286 EFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV------ 339
+ + Q ILD + DVP +L + + + ++ + + ++
Sbjct: 386 KTAIEQATDNAILDQLGKLVEVDVPRALFQEQGQQLYGAKLLQLQAERKLDKDQLASLSS 445
Query: 340 DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALY---QQLGRFPGHEK 396
+E L+ R + + +G I + N++ + E++ + ++ +
Sbjct: 446 QKSVQEYLESERENINRIIKQMLAVGEIFKAENLQFSTEQLVKEVENSIEEFKHYNQDYD 505
Query: 397 KMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
+ + +++ + KV++ + ++ I
Sbjct: 506 E--------GSIKQQVQDVLEAAKVLEWLKENCIIE 533
>gi|281356562|ref|ZP_06243053.1| trigger factor [Victivallis vadensis ATCC BAA-548]
gi|281316689|gb|EFB00712.1| trigger factor [Victivallis vadensis ATCC BAA-548]
Length = 435
Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats.
Identities = 71/435 (16%), Positives = 170/435 (39%), Gaps = 18/435 (4%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
Q+ + ++ ++E D ++P++ + + + +I ++ GFR GK P++ IK+ Y
Sbjct: 10 QMEVRDAQPCRKEFDFVVPADVVKSEAEKTVREIAGMVSVPGFRQGKAPVNMIKTKYDGE 69
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I E +I+ ++ + K L D+
Sbjct: 70 IREELQRKIMYAAFEMASKDEVYDIIS---------CGIEGKPELKLDAEFKFTLGADVA 120
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P+IE+ + ++V V +++++ ++ + E ++ D + V Y
Sbjct: 121 PEIEVGDYKAIKVEIPKDAVTDEQVEERVKFYRTMYGNYADVEGAAQAEDMLKVSYKSDF 180
Query: 182 DNVIL------EDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
+ N + + + L G + G + + +P D+ L
Sbjct: 181 ELPEDATPAVKRQAEADNTFIWLSEPESIPGCIKALTGAEKGKEYTFDAVYPADYREAAL 240
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
AGK V+ ++ + V+ + +LA + +S R + + ++Q SE +V
Sbjct: 241 AGKTVKYTVKVEGIQRRS-VLTDEELAEKARVKSLEEFRDMLRKAMEQESETKHHNEVVE 299
Query: 296 QILDYISNKY-TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
+ ++ + ++P ++++ E + LQK+ E+ + + ++ E A
Sbjct: 300 AVYKRLAEQVGDVELPPNVLQAEISKELQKIAREVVKSEEDAETFKKELETHKAAAEKAA 359
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ + +L I + NI +++ E+ L Q + EK+ +K + +L+
Sbjct: 360 RESLKKSFILRKIAKLENISLSQGEVDEQLNQMSRYYGYKEKEFRAMLEKNGG-MDDLQL 418
Query: 415 PIFEDKVIDHILKSV 429
+ KV+ + +S
Sbjct: 419 DLINAKVLSMLAESA 433
>gi|22298051|ref|NP_681298.1| trigger factor [Thermosynechococcus elongatus BP-1]
gi|34222745|sp|Q8DLI3|TIG_THEEB RecName: Full=Trigger factor; Short=TF
gi|22294229|dbj|BAC08060.1| trigger factor [Thermosynechococcus elongatus BP-1]
Length = 473
Score = 129 bits (324), Expect = 8e-28, Method: Composition-based stats.
Identities = 60/476 (12%), Positives = 177/476 (37%), Gaps = 28/476 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-I 62
+ + + + +N+ + D+ + GFR GK P + G+ +
Sbjct: 2 TTEPRSNSQLLATIEVSGTHSQQVYNQVVNDLLRHTQVPGFRKGKAPRQLVLQQLGRERL 61
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
++++I++ V + K + + G + +++D+ P
Sbjct: 62 RYLAMEKLIEDAVKTAVEKNNIPYLGNLELA---GGITELLDQFHPGENFSFSVTFDVEP 118
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYTVS 180
++ ++++ L + + + +++ + + + + E D T
Sbjct: 119 EVTVTAYKGLTIEYNPVTYNPATVEKLLQQHQRQHATLIPVEDRPAQWGDDVTLKLLTKD 178
Query: 181 VDNVILEDQSKKNVQFIVGSADLF--SETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ ++++ S + + F E +VG+ G+ K + E+ A +
Sbjct: 179 ENGEVVKELSADELPLSLDEDQPFLLQEIPAAVVGMAIGEAKTVTVSVAEEAE----APR 234
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++ + + P +++ A F + + +R Q ++ ++ +Q + +
Sbjct: 235 QLTAEIELLGIKVPELPPLDDAFAAEHSEFSTMAELRAYLEQNHQERAKHQDKQAKEAAL 294
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLAK 355
+D + + ++P++L+ E + ++ ++ S + + + E Q A
Sbjct: 295 IDTLIAQNPVELPKTLIRKEADVKVRTTLMQIQSQGVDLHKIMTEELYERMRQEAEPAAT 354
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ V + ++L I + IE T E ++ L + K L+ +K +
Sbjct: 355 KEVHSRLLLKAIARQEGIEPTPEAVEERLNRYKEMLGNKTAKNLEQLRKLAH------DE 408
Query: 416 IFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ +++ + +L+ TF + + + + P + ++++T + PS+
Sbjct: 409 VQQEQTLSWLLEQN-------TFQPVQSDVATAEPTATAEAPTEIQTEAVAQTPSQ 457
>gi|297621811|ref|YP_003709948.1| putative trigger factor [Waddlia chondrophila WSU 86-1044]
gi|297377112|gb|ADI38942.1| putative trigger factor [Waddlia chondrophila WSU 86-1044]
Length = 407
Score = 129 bits (324), Expect = 9e-28, Method: Composition-based stats.
Identities = 75/417 (17%), Positives = 165/417 (39%), Gaps = 12/417 (2%)
Query: 17 VIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVP 76
+ + ++ + I+ I + ++ GFR GK P ++ Y K + E D +++
Sbjct: 3 IQVTPLASEAAYQKAIKKINKEVSLPGFRKGKAPAKMVEDNYSKYVNQEWQDIMVQAAFQ 62
Query: 77 EILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQ 136
+ + R +I E + + ++ + EI
Sbjct: 63 DAIKLTSIYPLSRETIQKPELQDASRKNGGQIVIEFESSPEI-----PEIEPKKLKLKKV 117
Query: 137 DICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQF 196
+ E+ ++++ + +I ++ +E + D K+ +F
Sbjct: 118 EKKEIKDEDLGEALKDIQLHHATWEEIDNRGVEKGDYIDVDI--EDASAPGTFICKDTRF 175
Query: 197 IVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVV 256
V + + ++++G KTGD E ED D +IK + +P
Sbjct: 176 EVEEGKMGAWMLKLVIGKKTGDVVEGTSERSEDLD-PDTEFTPTECKITIKSIKTPNLPE 234
Query: 257 VNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVEN 316
++ +LA ++G ES ++ + + +E VR K++ Q+ + ++ + F+VPESL+ +
Sbjct: 235 IDEELAQKIGAESVEDLKTKLTSNLNSQAEEEVRHKLRMQVENSLAKHFPFEVPESLILS 294
Query: 317 EYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVT 376
E N L +R ++ +A + + + S ED + A R + I E+N I V+
Sbjct: 295 ETNNRLNHLRHKLKNAGETEEAISSKLNEDREKIRDDAIRAFRLFFISRHIAEENKISVS 354
Query: 377 EEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVD 433
++E+ L Q+ +D +++ + KV D +++ + D
Sbjct: 355 QDELVRELVVQMYS----PSSPIDTSLDPEEVRSKVYVNLLSQKVKDFLIEQAAMED 407
>gi|257063881|ref|YP_003143553.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Slackia heliotrinireducens DSM 20476]
gi|256791534|gb|ACV22204.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Slackia heliotrinireducens DSM 20476]
Length = 554
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 77/466 (16%), Positives = 166/466 (35%), Gaps = 46/466 (9%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+ E + + + I + + ++ +D +K GFR G VP I++ GK
Sbjct: 6 NTQVETLESGQEKATITIEAKEIKSRIAKKYKDYGNKYVFPGFRKGHVPRPVIEAQVGKE 65
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
L + ++I ++++P + + D + + L+ D + YD
Sbjct: 66 QALMDVTEDIYEDVLPIAMDEADVYPIAQVKLEDQT-------ALVAEGEDFVFSVIYDA 118
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES----EIGDKVTVD 176
P +E++S+D +++ E EKEID Q+ N FE + E G
Sbjct: 119 KPVVELNSYDPVEIEAPFEEATEKEIDEQVEVARNNYAKFEPTDDEDAVIVAEGAAKLNL 178
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH----SI 232
+ +E+ + + + +G + LVG K GD +E ED +
Sbjct: 179 TVTDAEGNAIEELAANDSHYELGLNTYPKAFDDALVGKKKGDTITVEINVAEDKCGVSDL 238
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRL---GFESESAMRGLCSQKIKQHSEFLV 289
+ + + V + + V ++ +A+R ++I + +V
Sbjct: 239 LEDKTETATFTAEVVAVETLVAPEVTDEWVSETSGGKLADVAALRQQFFEQITEEKAPMV 298
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEM-------------------- 329
++ +S ++ ++PE+++ + Q++ +
Sbjct: 299 ATIMENNAALELSKRFEIELPEAMINDAMAEYQQRLIGQQLANMGIPQQYAQKLIDENPD 358
Query: 330 ---SSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ 386
Q Q + E+ ++ M A V + L I I VT +++ + +
Sbjct: 359 LANQMLMQYLQQANISPEQFPEHLRMQAIDDVKGNLALDAIARHKGITVTNDDV---MEE 415
Query: 387 QLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
+ KK + K L E+R I + + +L+ +
Sbjct: 416 FVNSGVEDPKKAFKSW-KDAGRLHEIREGILRGEAMKAVLEEAVVT 460
>gi|91216687|ref|ZP_01253652.1| putative cell division trigger factor [Psychroflexus torquis ATCC
700755]
gi|91185156|gb|EAS71534.1| putative cell division trigger factor [Psychroflexus torquis ATCC
700755]
Length = 458
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 73/455 (16%), Positives = 167/455 (36%), Gaps = 31/455 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + L + + I N + + ++D R A+I GFR G VP IK YGK
Sbjct: 19 MKITREDKDQLNSVIKINIEKNDYSPKVEKVLKDHRKTASIPGFRKGMVPTGMIKKQYGK 78
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L + ++++++E + ++K P L + D +
Sbjct: 79 SVLVDEVNKLLQESLNSYITKEKLEILGNPLPKP-------QDELNWESDDYNFEFELGL 131
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +I+ + V DE+ ID Q+ I + E E V +
Sbjct: 132 APKFDITLEGEGPVKYYNISADEEMIDNQLKTIQRQYGKLEPHNEVKENFTVVGTFHNEE 191
Query: 181 VDNVILEDQSKKNVQFIVGSADLF--SETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ +++ +L ++++ + E G
Sbjct: 192 EGIENEATFNVEDLDGESNQKELLGAKAGDQVILKSSKLFKDEDTLATQLGIEKDKAEGL 251
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
KV L F+IK++ + +N +L + E E + +KI + S+ +Q+ +Q
Sbjct: 252 KVDLTFTIKDINEQILAELNQELFDKAFGEGEVSSEKEAKEKIAEQSKQTFQQQGDQQFF 311
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ ++ SL E ++Q + E+ + + +++ +
Sbjct: 312 NDVTEHLIEKSNMSL------------PSEFLQKWMQTQGEKKLTVEEAKDEYEKSEKGI 359
Query: 359 LTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFPG------HEKKMLDHFQKYPNA 408
++ I + NN+ V E++ + + Q+ +F ++ +
Sbjct: 360 KYQLIEAKIAKDNNVRVEMEDVKKVAKEKIKMQMMQFGQMDFPEDQMDGIIQNLMSNQEQ 419
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ + + K++ + ++I ++ VT+ + D
Sbjct: 420 VKQFSEEVMVQKLLGLYKEKMKIEEKDVTYKEFVD 454
>gi|224534183|ref|ZP_03674762.1| trigger factor [Borrelia spielmanii A14S]
gi|224514544|gb|EEF84859.1| trigger factor [Borrelia spielmanii A14S]
Length = 417
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 68/418 (16%), Positives = 177/418 (42%), Gaps = 14/418 (3%)
Query: 34 DIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSIT 93
D S+ I+GFR GKVP++ I+ Y + + + ++E++ + E + +R S
Sbjct: 1 DYSSRLKIQGFRIGKVPINIIEKKYSEGLRATVLEEVVNNSLKEFFKEEPKRPLSYASPA 60
Query: 94 INEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEI 153
I E + ++ D + Y+ P+ ++ + D + V ++ EV + D
Sbjct: 61 IKE-----ENLRLDLDKDFEFTFVYETYPEFKVPNIDGIDVEVEVPEVFIDDSDIDDEIR 115
Query: 154 AKNNVAFEVKETESEIGDKVTVDY----TVSVDNVILEDQSKKNVQFIVGSADLFSETTE 209
+ E E + K ++ + + +++ F VG ++ + +
Sbjct: 116 HLQIENSIIIEDEEGVVKKDSIVKVNFVELDDLLNEVVSTKRQDFVFTVGKSETYYDFDR 175
Query: 210 ILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAV--RLGF 267
++G++ +++ IE+ + D+ ++LAG +L IK + +++++ A +
Sbjct: 176 DVIGMRINEERVIEKSYNTDYKFEELAGSLRKLKIKIKSIKKRDLPLIDDEFAKDISGRY 235
Query: 268 ESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRF 327
++ ++ KI E + IS K D+P S++E E + +
Sbjct: 236 DTLDDLKNFIRSKILSLIEEKKEALKLNKFFSNISEKLEIDIPHSMIEAEIEIAFKDAKR 295
Query: 328 EMSSANQKSQNVDSIDEEDLQYY-HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ 386
+ + ++ +++ E + + +++ + + + I+VTE +++ + +
Sbjct: 296 QNKMSLEEFKSMFYSSEYVGSDNLKDEILNNLKSKLIIQKMVDLDPIKVTESDLKDEMVR 355
Query: 387 QLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
Q +++ + + N ++ L+ I +V IL +++ + ++V+F +
Sbjct: 356 QSKNSGLSYEEIKKFY-EDQNLISYLKDDIKRKRVEKKILANIKEVKGKQVSFKDFVN 412
>gi|227486245|ref|ZP_03916561.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
gi|227235781|gb|EEI85796.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
Length = 251
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/256 (17%), Positives = 107/256 (41%), Gaps = 11/256 (4%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-LS 64
K E + + + + + + + + + I GFRPG VP ++ +YG I
Sbjct: 5 KSHENNIAKFEFNVSYDDFKKATDTVYKKNKKRYRIDGFRPGHVPRRVLEKMYGPEIFYD 64
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
+ I + E + + + +PS+ +++ IE D+ ++ + P
Sbjct: 65 DAIQIVFPEPYEKAVEELGLEVIDQPSVDLDD---------IEEGKDITFKVEVETKPHP 115
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTVSVDN 183
+ ++DL + + EV ++++ ++ + N E+ + + DKV +D+ +D
Sbjct: 116 VLGDYNDLVIEEVSEEVTDEDVKAELDRQLEENARLVEITDRPVKKDDKVNIDFDGYLDG 175
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E + ++GS + + ++G GD+ ++ FPED+ K+ GK +
Sbjct: 176 ERFEGGKAEKYDLVIGSNTFINGFEDQIIGHNVGDKFDVNVTFPEDYQAKEFQGKDAKFV 235
Query: 244 FSIKEVFSPLPVVVNN 259
I + +++
Sbjct: 236 VEINSITEKQLPELDD 251
>gi|221133887|ref|ZP_03560192.1| trigger factor [Glaciecola sp. HTCC2999]
Length = 171
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 89/176 (50%), Gaps = 9/176 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL+R + V +P+ + D+ R++ + I GFRPGKVP+ ++ +G
Sbjct: 1 MQVSVETTQGLERRVTVAVPAASVDDAVKARLQQLAKTQRINGFRPGKVPVKVLQKRFGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E ++++ E + + A PS + + + DL+ +++
Sbjct: 61 SVRQEVAGDLMQRHFYEAIIQEKITPAGMPSFDLTKDVA---------GEDLEFTAVFEV 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD 176
P++E+ D L V + E+ +K++ M + K + ++ + +++ D+VT+D
Sbjct: 112 YPEVELKELDQLSVETPVVEIKDKDLKEMMVTLQKQHADWKEGKRKAKKDDRVTID 167
>gi|291515532|emb|CBK64742.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Alistipes shahii WAL 8301]
Length = 441
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 70/471 (14%), Positives = 149/471 (31%), Gaps = 55/471 (11%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M ++ + + V + + + + + KANI GFRPG VP+ +K +YGK
Sbjct: 1 MNIVREQRGENNSLIRVTVGEADYGQEVEKSLREYKRKANIPGFRPGMVPMGIVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L+E V E L K + + + +
Sbjct: 61 GVLAEQSYRQASNAVFEYLQKEGIDYLGD-----VIPAEEQGDFDFDNATEFEFVFEIGE 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I++ D ++T + +VD+K D + + E +
Sbjct: 116 APEIKLELSDKDKLTYNKIKVDKKMHDDYRSNYLRRFGRLVDAEKVTSDEALSVT----- 170
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA---- 236
L++ VG + + +G K GD+ ++ + + A
Sbjct: 171 -----LDNGEMNVADAYVGLISMDEADRKPFIGKKVGDKMKVNINELYKNPAQRAACLQV 225
Query: 237 ------GKKVRLNFSIKEVFSPLPVVVNNDLAV----RLGFESESAMRGLCSQKIKQHSE 286
G I ++ +N + + G E+ + +I+
Sbjct: 226 KENELEGVNPEFELEITKIRKFAEPELNEEFFKMAFPQGGVTDEAGLDKFIDAQIEAELR 285
Query: 287 FLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED 346
Q+ DY+ K +P + ++ I N ED
Sbjct: 286 RESDYLFTLQVRDYLVKKADLKMPAAFLKRWLYTI----------------NEGKFSMED 329
Query: 347 LQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGR------FPGHEKKMLD 400
++ + + + + I V++EE S P ML+
Sbjct: 330 IEKDFDQFLKMFTWNYLQKHFIKTDGISVSKEEALSEAKALAASQFAQYGMPSAPDDMLE 389
Query: 401 HFQK----YPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ + + ++ ++E KV++ + V++ ++ V+ D + E
Sbjct: 390 GYAEKILADKDQGQKIYEKLYEVKVVEDVKSKVKVTEKAVSADDFAKLAKE 440
>gi|26554146|ref|NP_758080.1| FKBP-type peptidyl-prolyl cis-transisomerase [Mycoplasma penetrans
HF-2]
gi|41018227|sp|Q8EV76|TIG_MYCPE RecName: Full=Trigger factor; Short=TF
gi|26454154|dbj|BAC44484.1| FKBP-type peptidyl-prolyl cis-transisomerase [Mycoplasma penetrans
HF-2]
Length = 445
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 73/444 (16%), Positives = 177/444 (39%), Gaps = 19/444 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ +E ++ + + + ++ I + G+RPGKVPL K
Sbjct: 1 MKITSVKNEKELVSFEIDLSEKKWNEFLDKEILKASKNLKMPGYRPGKVPLEIAKKNINM 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + + I I+ + + + + S + + +S+
Sbjct: 61 PVCFVNALSSARERIEDWIIDQDEFKKMADEICDFDPVTSKPNNSNNVLNKTVSFTMSFG 120
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P+ ++ + D+++ + +V+++ +D+ + + N VKE +++ D V +D+
Sbjct: 121 KYPEFKVKNVKDIKIEKIESKVNKQMVDQAIEKELAKNETMSVKERAAKLNDIVIIDFKG 180
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
VDNV E KN + +GS E LVGLK GD+K++ FP+D+ + +L GKK
Sbjct: 181 YVDNVAFEGGEAKNYELKLGSKSFIDNFEEQLVGLKAGDKKDVNVTFPKDYHVANLKGKK 240
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
+ ++ V ++++ L + + + + ++++ + V +++
Sbjct: 241 AKFEVTVHVVNEVETPKLDDEFVKSLNLKNVNTVAEYKKHLEAELQKQLDGTVDNQIQSA 300
Query: 297 ILDYISNKYTFD--VPESLVENEYNGILQKVRFEMSSANQKSQNVDSI---------DEE 345
+ ++ D + E LV N + ++ + + E+
Sbjct: 301 LYTELNKMVPSDLKIHEGLVNNVAEIFISRLMISLIGKVVNIDEFVKMIDGGRGALTKEK 360
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
++ A+ + L + I V+ E+++ + + EK++ + F Y
Sbjct: 361 LIEEEKNQAREYLKVKFALKQYSKVEKISVSNEDIEKEIKEIAANSNTKEKEIKEDFAVY 420
Query: 406 PNALAELRAPIFEDKVIDHILKSV 429
+ ++ + KV +++ V
Sbjct: 421 ----SSIKREALDKKVFEYLKNQV 440
>gi|326528155|dbj|BAJ89129.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 72/456 (15%), Positives = 173/456 (37%), Gaps = 36/456 (7%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGK-VPLSHIKSLYGKS 61
VIE + V +P + + + + + + + GFRPGK VP + + + G
Sbjct: 89 VIETPQPNSCVKFSVEVPPSICQECYQTTLLEYSKRFKVPGFRPGKIVPENVLLNYVGPQ 148
Query: 62 -ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ + T++ I++ +P+ LS +ER A+ S+ I D+ + ++ D+
Sbjct: 149 HVRAATVEAILRHTLPQALSSVEER-ALEDSVRILTKFDDMNEA-FSLDHVFRYDVAVDV 206
Query: 121 LPQIEI-----SSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV-- 173
+P++ + + D EK + ++ K+ + +
Sbjct: 207 VPEVRWLSEDKYKNLKVVIEIDEIVDAEKAAELELKRRRKSLGLLRIVTDRGLQVGDLVV 266
Query: 174 ------TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFP 227
T+ S I +S + +L L+G++ G+ + FP
Sbjct: 267 LDILAETITTDGSKGEKIPSAESTGFHLDTEENTNLVPGFLGSLIGIRPGETRTFPIQFP 326
Query: 228 EDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHS 285
E + L G + + KE+F +++ LA + G + ++ ++ K+
Sbjct: 327 ESFEQETLQGVRAQFTVVCKELFYRELPELDDSLAAKLLPGCNTIDEVKERILERCKEVE 386
Query: 286 EFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV------ 339
+ + Q ILD + DVP SL + + + ++ + + ++
Sbjct: 387 KTAIEQATDNAILDQLGKLVDVDVPRSLFQEQGQQLYGAKLLQLQAERKLDKDQLASLSS 446
Query: 340 DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALY---QQLGRFPGHEK 396
+ +E L+ R + +V+G I + N++ + +++ + ++ R+
Sbjct: 447 EKSVQEYLKSERENITRIIKQMLVVGEIFKAENLQYSTDQLVKEVENSIEEFKRYNQDYD 506
Query: 397 KMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
+ N +++ + KV++ + ++ I
Sbjct: 507 E--------GNIKQQVQDVLEAAKVLEWLKENCTIE 534
>gi|153826364|ref|ZP_01979031.1| trigger factor [Vibrio cholerae MZO-2]
gi|149739842|gb|EDM54033.1| trigger factor [Vibrio cholerae MZO-2]
Length = 133
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + EGL+R L++ +P+ + D+ + +I GFR GKVP+ + +YGK
Sbjct: 1 MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + E+++ E + K A P+ E I DL ++++
Sbjct: 61 AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVE---------IGEGKDLVFTATFEV 111
Query: 121 LPQIEISSFDD 131
P++E+ +
Sbjct: 112 YPEVELKGLEK 122
>gi|261880039|ref|ZP_06006466.1| trigger factor [Prevotella bergensis DSM 17361]
gi|270333279|gb|EFA44065.1| trigger factor [Prevotella bergensis DSM 17361]
Length = 450
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 70/467 (14%), Positives = 168/467 (35%), Gaps = 38/467 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + + L L + + + + + ++D R KAN+ GFRPG+VP+ IK YG
Sbjct: 1 MKVSFENPDKLNAVLTITVEEDDYKNDVEKTLKDYRKKANMSGFRPGQVPMGIIKRQYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + I++++ + + ++ + P + + D +E +
Sbjct: 61 SVKMDAINKLVGNEIQKYITDNKVQMLGEPLASEKQEPQD-----LEKAAPYTFIFDIAV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ +I ++ EVD+ IDRQ+ A + +E + +
Sbjct: 116 APEFDIEFTPKDKIDFYEIEVDDALIDRQVEMFASRSGKYETVAEYQDGDMLKGDLRELD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD-----------QKEIERFFPED 229
E I+ + + ++ G KTGD + + E
Sbjct: 176 EKGSTKEGGLTVEAAVIMPNYIKADDQKKLFDGAKTGDIITFNPRKAYPESDTEVSALLK 235
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+++A ++ + E+ VN +L + E KI + + +
Sbjct: 236 IKKEEIAEHSGDFSYQVTEIQRFRNHEVNQELFDKTFGEGVVKDEKDFRAKIAEGLKAQL 295
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ + L + V + + + K + +N +
Sbjct: 296 ASESNYKFLLDMRKYAEDKVGQLTYPDALLKRIMKNNNKDKDQEFIDKNYEP-------- 347
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQ----SALYQQLGRFPGH--EKKMLDHF- 402
+ + + ++ + E+ I++ +E+++ A Q ++ + ++ ++++
Sbjct: 348 ----SIKELTWSLIRNKLVEQAGIKIEDEDVKQAAREAARAQFAQYGMNNVPEEYVNNYA 403
Query: 403 ---QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
K + + K+ D + K+V++ +KVT D+ +
Sbjct: 404 DELLKKQETVQNFVDRAIDVKLADAVKKTVKLNKKKVTLDEFNKMAE 450
>gi|126653839|ref|ZP_01725702.1| trigger factor [Bacillus sp. B14905]
gi|126589676|gb|EAZ83813.1| trigger factor [Bacillus sp. B14905]
Length = 203
Score = 128 bits (320), Expect = 3e-27, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 80/210 (38%), Gaps = 10/210 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG L + +P+ + + ++ + + + N+ GFR GK+P + +G
Sbjct: 1 MSAKWEKQEGNIGTLTIEVPAAEVDAAMDQAFKKVVKQINVPGFRKGKMPRKMFEQRFGI 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+S+ + ++ I+ + + + + P I+ E D
Sbjct: 61 ESLYQDALEIIVPDSYAKAIDEAGIMPVDYPEISGTE--------NFVHGQDFSFTAQVT 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVDYT 178
+ P+ ++ + L+V + EV ++E+D Q+ + E ++ GD +D+
Sbjct: 113 VKPEPKLGDYKGLEVAKLPVEVTDEEVDAQIQDQLARKAELEIKEDEAIVEGDTAVIDFE 172
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETT 208
V E ++ +GS
Sbjct: 173 GFVGEEAFEGGKGEDYPLEIGSGSFIPGLK 202
>gi|224009612|ref|XP_002293764.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970436|gb|EED88773.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 450
Score = 128 bits (320), Expect = 3e-27, Method: Composition-based stats.
Identities = 69/453 (15%), Positives = 164/453 (36%), Gaps = 42/453 (9%)
Query: 13 RELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPG-KVPLSHIK---SLYG--KSILSET 66
EL + IP+ ++++ + ++ K +I GFR G K+P I+ S G K++ +
Sbjct: 5 VELTLQIPATATGAAYDKCLAEVAKKVSIPGFRKGAKIPPQVIENAWSRNGGKKALKTMA 64
Query: 67 IDEIIKEIVPEILSKR-DERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
I+E+ E++ L + D +PS+ +++ + L++ + D+ P I+
Sbjct: 65 INELCGELIGPALKEEYDLEPIGQPSLV---TSAEVIAESFTPGEALEVTVKCDVWPDIQ 121
Query: 126 ISS-------FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI--------- 169
+ L + +++ D + ++ + V E E S+
Sbjct: 122 WKEVEGQEKPYFGLTGSYKRKPFNQERFDAALRDLKERYVKLEPYEDASQQLVMGDACVV 181
Query: 170 -GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPE 228
+ + + + S NV+ ++G E LV K G+ K + FP
Sbjct: 182 NMVGYMATASGEKGDALPDAASGDNVEVVLGPGRYMDGLVEGLVDGKVGEVKTVNVRFPA 241
Query: 229 DHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEF 287
KDLAGK + I + + ++ A ++ + +++ + +
Sbjct: 242 ALKNKDLAGKDAIFDVEILSASKRILPELTDEFAEQVRPGLTAESLKDELRKAVDSQDAQ 301
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
+ +S +VP++L+ N+ + +M ++ +++ + +
Sbjct: 302 EYMGARNEALGKALSGVLEVEVPDTLITNQAREKYALMMTDMRNSGMADEDIKKMISPEN 361
Query: 348 QYYHML-----AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALY---QQLGRFPGHEKKML 399
+ R + + I NI+V +++ + Q + E
Sbjct: 362 FIKYKELSVDGIVRDFKVSMAVDEIARLENIQVPAYQVEEQMQSLKDQAAQEGQSEDM-- 419
Query: 400 DHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
++ + + V D + + +V
Sbjct: 420 ----DEEQTRRKVESTLERRMVYDFLAEHANLV 448
>gi|167754482|ref|ZP_02426609.1| hypothetical protein ALIPUT_02778 [Alistipes putredinis DSM 17216]
gi|167659107|gb|EDS03237.1| hypothetical protein ALIPUT_02778 [Alistipes putredinis DSM 17216]
Length = 441
Score = 128 bits (320), Expect = 3e-27, Method: Composition-based stats.
Identities = 55/457 (12%), Positives = 142/457 (31%), Gaps = 27/457 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M ++ + E + V + D+ + + + + KANI GFRPG VP+ IK +YGK
Sbjct: 1 MNIVREQREQNNSLIKVTVGEKDYGDAVEKSLREYKRKANIPGFRPGMVPMGVIKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L+E E L ++ + E + +
Sbjct: 61 GVLAEQAYRQASEAAFNYLQEQKIDYVGD-----VIPSEEQGDFDFENGTEFEFIFEIGE 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P++++ ++T +VD+K D + + + +
Sbjct: 116 APEVKLELSAKDKMTYYTIKVDKKMHDDYRSNFLRRFGRLVDTDKVTADEALEVTLDNGD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + + V + + +R +L G K
Sbjct: 176 MKIEGAYVGLISMNEEERKPFIGKKVGFKTQVNVNELYKTPAQRAAVLQVKENELEGIKP 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ I ++ +N + + +R++
Sbjct: 236 EFSLEITKIRKFAEPELNEEFFKMAFPAGNVKTAEEFEAFVDAEISKELRRESDYLFTLQ 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + L + ++ ++ + N+ + I+++ + +
Sbjct: 296 LRDFL-------LKKAGLTMPVEFLKRWLYVINEGKFTKEEIEKDFDAFVKL-----FTW 343
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGH------EKKMLDHFQK----YPNALA 410
+ +++N+ VT EE + + ML ++ K
Sbjct: 344 NYLQKYFIKQDNLTVTPEEATAEAKALAQAQFAQYGLPTAPEDMLANYAKKILEDREQGQ 403
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ ++E KV++ + +++ ++ V+ ++ + E
Sbjct: 404 KIYEKLYEMKVVEDVKSKIKVTEKAVSAEEFAKLAKE 440
>gi|311086776|gb|ADP66857.1| trigger factor [Buchnera aphidicola str. TLW03 (Acyrthosiphon
pisum)]
Length = 418
Score = 127 bits (318), Expect = 5e-27, Method: Composition-based stats.
Identities = 66/428 (15%), Positives = 157/428 (36%), Gaps = 14/428 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + + IP + +S + IR I GFR GK P+ I+ YG
Sbjct: 1 MNFFMEKNKDAGHRVTIKIPKTTVNNSLFQEFIKIRKTTKINGFRKGKTPIRVIQEKYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + +++++ E L + P I++ + + + Y++
Sbjct: 61 AIYYDIFKKLMQKFFYEFLKTEKIKIIGSPKFYIHQ-------DEDKKKEYFEYSVIYEL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
PQ +I ++V + E+ E++I + + + + D+VT++Y +
Sbjct: 114 YPQFQIKDIKQIKVNKINVEITEEDIKKNIETNKNKKNIWNPVNKAVKSYDRVTINYCIY 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N ++ K N+ FIV L + ++ D + F H K+L K +
Sbjct: 174 EKNKKIKKFDKDNISFIVSKNTLIPQLNYKIINHFVNDIIFFKIKFHAFHPEKELQNKDI 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
I ++ + ++ + + + ++ QI+
Sbjct: 234 TFKIKIIKIEKKQELESEKSNKKNITEKKTIQTDYQTIKNNLHSQINIITDKYLENQIIQ 293
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
I K +P L + E + ++ + +N + ++++ K+R+
Sbjct: 294 KIVEKNILLLPPLLFQKEIKNLYKQYTKQYQE-----ENSNILEKKYHMSLDSEVKKRLY 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
I++ I N + E +Q + + + + +++ + K N ++ E
Sbjct: 349 FQIIIEQIILNNKLFADENNIQKLIKKISSNYK-NPMEIIKLYNKNKNLKNTMKNIELER 407
Query: 420 KVIDHILK 427
+ + + K
Sbjct: 408 QAMLLLKK 415
>gi|212696600|ref|ZP_03304728.1| hypothetical protein ANHYDRO_01140 [Anaerococcus hydrogenalis DSM
7454]
gi|325847161|ref|ZP_08169960.1| trigger factor [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212676331|gb|EEB35938.1| hypothetical protein ANHYDRO_01140 [Anaerococcus hydrogenalis DSM
7454]
gi|325480941|gb|EGC83987.1| trigger factor [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 281
Score = 127 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 59/285 (20%), Positives = 125/285 (43%), Gaps = 12/285 (4%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI-LS 64
K E + D+ + + + + + RSK + GFR GKVP I+ +YG +
Sbjct: 5 KSHENNIAKFDLTVAAEDFQKAVDNVYKKNRSKYRVDGFRKGKVPKRIIEKMYGVEVFYD 64
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
E I E+ E + + + + +PS+ ++ IE D+ ++ + P
Sbjct: 65 EAIQEVFPEPYNKAIDELNLEVIDQPSVDFDD---------IEKGKDVVFKVEVETKPHP 115
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYTVSVDN 183
+ + +L+VT+ EV +++++ ++ + N E E++ GD V +D+ +D
Sbjct: 116 TLGDYSELEVTEIPSEVTDEDVEHELKHQQEENARIIPVEDGEAKDGDTVNIDFDGFLDG 175
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E +N ++GS + + + G K GD+ ++ FPED+ K+ GK +
Sbjct: 176 ERFEGGKAENYDLVLGSKSFVGDFEKQVEGHKVGDKFDVNVTFPEDYQAKEFQGKDAKFE 235
Query: 244 FSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEF 287
I + ++++ A FE+ ++ + +K+ +
Sbjct: 236 VEINSISRKELPEIDDEFAKDISEFETLEELKEDTKKNLKKIRKN 280
>gi|224373740|ref|YP_002608112.1| trigger factor [Nautilia profundicola AmH]
gi|223589286|gb|ACM93022.1| trigger factor [Nautilia profundicola AmH]
Length = 428
Score = 127 bits (317), Expect = 6e-27, Method: Composition-based stats.
Identities = 95/429 (22%), Positives = 194/429 (45%), Gaps = 18/429 (4%)
Query: 6 KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSE 65
K + + +I + L ++ + I KA I+GFRPGKVP+ +K +Y I +
Sbjct: 5 KKIDSANSIIKAVIENQDLEAKKDKIAKQIAKKAKIQGFRPGKVPVKVVKKMYAADIEQD 64
Query: 66 TIDEIIKEIVPEILSKRDE-RAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
I E ++E++ L + P +T E + D I+ P+I
Sbjct: 65 AISEAVREVLDNGLKELGITDMIAEPEVTKFEKKDDKIEVEIK----------VYTRPEI 114
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD--KVTVDYTVSVD 182
EI V + E + + A + + + +D+T +D
Sbjct: 115 EIGDEYKECVPEVEVPEVTDEEVEEEIKKIAEAQAETKVSRKRILKEGLIGVIDFTGYID 174
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+E+ S + +GS E LVG+K G+ K I+ FPE++ K++AGK+
Sbjct: 175 GEKMENGSAEAYPLEIGSNSFIPGFEEQLVGMKVGESKRIKVTFPENYGAKEIAGKEAEF 234
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ +++E+ +P +N++LA + + + ++ + Q I++ + K +IL+
Sbjct: 235 DVTLQEIQEKVPAEINDELAKKYMAKEDATLDELKEMIKQSIEERKKAEAFAPKKEEILE 294
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-QKSQNVDSIDEEDLQYYHMLAKRRV 358
+ KY D+PES+VE E ++ +M+ A ++ Q +E + AK RV
Sbjct: 295 CLVKKYEIDLPESVVEKEVEIMINNEAQKMTPAELKELQENPEKLKELKEKLLPEAKDRV 354
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
++ I +K ++V+++E+ LY + + + ++ ++Q+ N L ++ + E
Sbjct: 355 KLTFIIDAIAKKEGVDVSDQELTQILYYEAIMQGQNPQDVVKYYQEN-NLLPVIKMNLIE 413
Query: 419 DKVIDHILK 427
+K+++ +L+
Sbjct: 414 EKLLNKLLE 422
>gi|189502526|ref|YP_001958243.1| hypothetical protein Aasi_1181 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497967|gb|ACE06514.1| hypothetical protein Aasi_1181 [Candidatus Amoebophilus asiaticus
5a2]
Length = 465
Score = 127 bits (317), Expect = 6e-27, Method: Composition-based stats.
Identities = 59/480 (12%), Positives = 169/480 (35%), Gaps = 30/480 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M +I S L+ +L + + + I RSK N+KGFR G+VP + +K +YG
Sbjct: 1 MNIIFHKSNPLEADLIIDLTEEDYIPRVEQAIVQYRSKVNLKGFRKGQVPQALVKKMYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L + + E++ + + E + ++ R P + E + + + +++ +
Sbjct: 61 EVLLQVVMEMVTKAIQEYVEEQKLRLWGEPI--MVENSLYNSDINFQHPGNFQIKFECGL 118
Query: 121 LPQIEISSFDDLQVTQDICE-VDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+P ++++ + +++ + V + +D + ++ +
Sbjct: 119 IPDVDLTQLEQVEIECWKIKSVADNTVDEAIKKVQLQYGDAIEVTKSEPGDMVYGLLTDD 178
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEI-ERFFPEDHSIKDLAGK 238
+ + ++ + + + + L + + ++ L+
Sbjct: 179 ANFKQPVYLPAEIKFEKNATDLLDMEISEKRTLQLDPKQPYILPKVSAAHQETLSLLSSL 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ F+ ++++ +P +N + E E+ QK + +
Sbjct: 239 EGDYQFAAEKIYRTIPAELNETFFSNILGEDETFTLEEFKQKFSDSFIAYTQNVADSLLA 298
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + + L E L+ + +E + ++ + +
Sbjct: 299 NNLKQAVSNHISLELPETFIKKRLKSKN-------------PTWEESLIGQFYAYMQPNL 345
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPG-------HEKKMLDHFQKY------ 405
++ IG+++ I+VT EE+ + ++ G ++ + +K
Sbjct: 346 HWDLIAEKIGQEHEIQVTIEEIIELIKRKASTTRGYSELGTLSKEDLKKRIEKSFASGET 405
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
E IF++K++ + V+I ++ + ++ + S +K +
Sbjct: 406 DQRYKETYDLIFQEKILHTLKDKVKIHIKETSVEEFNQMLDDLSKKKDTASIDTPKVDNK 465
>gi|225460855|ref|XP_002277545.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297737496|emb|CBI26697.3| unnamed protein product [Vitis vinifera]
Length = 536
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 81/458 (17%), Positives = 165/458 (36%), Gaps = 32/458 (6%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPG-KVPLSHIKSLYG- 59
+V E + L V +P+ D + I + A I GFRPG KVP + + + G
Sbjct: 86 EVTETEEPNSRVRLSVEVPAVVCEDCYQRVIREFTKLAKIPGFRPGKKVPETVLINHIGK 145
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
K++ TI+ I+K P +S R A+ SI I SD+ L+ + D
Sbjct: 146 KNVQKATIESILKRTFPHAMSSVAGR-ALNDSIRIVTKFSDMEE-TYSSQKFLRYDIIVD 203
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQ------------MAEIAKNNVAFEVKETES 167
+ P+++ + + + + E+D ++ + +
Sbjct: 204 VAPEVKWVPENGYKNLKIVVEIDSDIDAQRASEQELKRRYKSLGLLRIITDRGLQIGDVV 263
Query: 168 EIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADL-FSETTEILVGLKTGDQKEIERFF 226
+ T + + K F D + ++G++ G+ K F
Sbjct: 264 VLDISATTIDQDESNVQKIPSAESKGFHFDTEDGDKVLPGFLDSIIGIRQGETKSFPLVF 323
Query: 227 PEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQH 284
PE ++L G + KE+F +N+ LA + G + ++ Q+ +
Sbjct: 324 PESWRQENLRGVHAQFTVECKELFYRELPELNDSLAEKLLPGCTTLEQVKESLLQRCLEV 383
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQ------KVRFEMSSANQKSQN 338
+ Q ILD + D+P+SL E + + + +++ S +
Sbjct: 384 EQTAKEQATDNAILDQLHKMIEVDIPQSLFEEQGRQLYGAQLLQIQANMKLNEQQLASLS 443
Query: 339 VDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKM 398
E L+ + + +G I + N++ EE+ + + F H+++
Sbjct: 444 SPKAVNEYLESQKENITSVIKQNLAVGDIFRRENLQFPTEELVKEVENSISEFKRHKQEY 503
Query: 399 LDHFQKYPNALAELRAPIFED-KVIDHILKSVQIVDRK 435
+ E + E KV++ + + +I +
Sbjct: 504 ------DEERIREQVQEVLEGAKVLEWLKEHAEIEYKT 535
>gi|212550901|ref|YP_002309218.1| trigger factor [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212549139|dbj|BAG83807.1| trigger factor [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 442
Score = 126 bits (316), Expect = 7e-27, Method: Composition-based stats.
Identities = 55/454 (12%), Positives = 135/454 (29%), Gaps = 25/454 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + ++ + + + + + + + ++ I GFR G VP S I+S+YGK
Sbjct: 1 MNITIEKTDDVNARITISVVKDDYQHLVRKSLSNLCKNVVIAGFRKGNVPQSIIQSMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++L E +++++ + + + + R P + + + D + +
Sbjct: 61 NVLVEELNKLVSNELLKYIKENKLRILGEPLLIKK-------NLDLNNQKDYEFLFDIGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+++I + ++ V + I+ Q++ + + E +
Sbjct: 114 QPEVDIGLTKNDELPYYTIVVTNEMIENQISTLKMQYGKHDTNVDVVENDSIIKGRLVEL 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETT-EILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
L I+ + E + + K GD + + +L+
Sbjct: 174 DAENALLKNGINLKDAILLPFSIKDEMERDKFINKKIGDVIIFNPYRAFKKNETELSYLL 233
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
I + R ++ L + + + IL
Sbjct: 234 KVKKTEIPNHQGNFSFDITEISYYRKAEINQELFDKLYGIGVVTSEKMFKEVIKRNLILQ 293
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
S + + + + N + D + +
Sbjct: 294 LESESNYRFLLDIKKILLEKIKKVRFPEDFLKRLFMESNANEKDF-------PNVLQAIK 346
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGR----------FPGHEKKMLDHFQKYPNAL 409
T + I E N I+VT E+M+ + + K +
Sbjct: 347 TQFIWNKIVEDNGIKVTSEDMRQTAKTLARVQFTLYNLRLISNDLLESYANEILKTEKWV 406
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+L E K+I + + + + V ++
Sbjct: 407 QQLHNKALETKIIGFLKEKISLKPISVMKEEFRK 440
>gi|320161062|ref|YP_004174286.1| trigger factor [Anaerolinea thermophila UNI-1]
gi|319994915|dbj|BAJ63686.1| trigger factor [Anaerolinea thermophila UNI-1]
Length = 489
Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats.
Identities = 67/431 (15%), Positives = 158/431 (36%), Gaps = 33/431 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + ++++ S L + I + I GFRPGK P ++ + G
Sbjct: 1 MKLEILDRDDHQKQIVAEFDSETLEKFKRQAARKISERTKIPGFRPGKAPYEMVRRIVGD 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
IL E I+ +I E P+IL + + I K
Sbjct: 61 GVILEEAIEILIDEAYPKILDETKIEPYGPGKLD-----------EIISMEPPKFSFLIP 109
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ P++++ ++ +++ EV ++++++ + + + E ++ GD V + +
Sbjct: 110 LQPEVDLGNYREIREEYTPPEVADEDVEKILNRLRRRAGTAVPVERPAQQGDLVAIKMSA 169
Query: 180 --------------SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERF 225
+N + + G F + L+G+ G++K ++
Sbjct: 170 HLINPEEGQEKILIEENNFEMIAGVSEEHTDEEGYEWPFPGFVQELIGVSAGEKKVVKHT 229
Query: 226 FPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQH 284
F DLAG++ F ++ V + +++ A + +E+ A++ Q++
Sbjct: 230 FSASDFSDDLAGQEAEFVFEVESVKEIVLPELDDSFAHLMGPYETLEALKNDIRQQLLSG 289
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS--- 341
++ +++D + T P +VE+E +L+ + ++ +
Sbjct: 290 KLQEYQRNYVDRVVDRLVEGATVKYPPVMVEDEVEHLLRHLEEDLGKQQMDLEAYLKARQ 349
Query: 342 --IDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKML 399
+E + A+ V +VL + I++ E+ +Y +K++
Sbjct: 350 ITREELIEKEIRPAAEANVKRNLVLEEFARQEQIQIKASEI-QTIYDIALNQARTDKELR 408
Query: 400 DHFQKYPNALA 410
K N
Sbjct: 409 QLAGKSMNTKQ 419
>gi|40889296|pdb|1P9Y|A Chain A, Ribosome Binding Of E. Coli Trigger Factor Mutant F44l.
gi|40889297|pdb|1P9Y|B Chain B, Ribosome Binding Of E. Coli Trigger Factor Mutant F44l
Length = 121
Score = 126 bits (315), Expect = 1e-26, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I G R GKVP++ + YG
Sbjct: 4 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGLRKGKVPMNIVAQRYGA 63
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ + + +++ + + K A P+ G + D + +++
Sbjct: 64 SVRQDVLGDLMSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEV 114
Query: 121 LPQIE 125
P++E
Sbjct: 115 YPEVE 119
>gi|328462609|gb|EGF34564.1| trigger factor [Lactobacillus rhamnosus MTCC 5462]
Length = 390
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 66/403 (16%), Positives = 161/403 (39%), Gaps = 25/403 (6%)
Query: 57 LYGKS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLR 115
+YG + + + ++ ++ + + + +P I + + ++
Sbjct: 1 MYGDAALYEDALNILLPDAYEAAVKESGIDPVDQPKIDVESM---------DEGKPWVIK 51
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DKVT 174
+ + P++++ + ++V + EV + +++ ++ + + VK+ ++ D V
Sbjct: 52 ANVTVKPEVKLGQYKGVEVPKQDVEVSDDDVNAELEKRREQQAELVVKDDKAAENGDTVV 111
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+DY ++D + S KN +GS E LVG K+GD+ + FPED+ D
Sbjct: 112 IDYVGTIDGKEFDGGSSKNYSLELGSNSFIPGFEEQLVGHKSGDEVTVNVTFPEDYKATD 171
Query: 235 LAGKKVRLNFSIKEVFSPLPVVV--NNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQK 292
LAGK +I EV + + + ++ + ++ +++ + +
Sbjct: 172 LAGKAAEFKTTIHEVKVKELPELDDDFAKDLDDDVDTLAELKDKIKKELTDQRKEAAKNA 231
Query: 293 VKRQILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDL 347
V+ + + T +VP +++E E + + + M + +E+
Sbjct: 232 VQEAAIKKATENATIEEVPNAMIEQEVHNQMDQYLGNMQRQGISPKMYYQLTGTTEEDLH 291
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+ RV T +VL I + +I+ TE+++ + + EK + +
Sbjct: 292 KQFEADAETRVRTNLVLEAIVKAEDIQPTEDQVTEEVKNLASEYNMDEKAVRQALSED-- 349
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
L+ I + ID I + + + + D+ D +
Sbjct: 350 ---MLKHDIGVKEAIDIITDNAK--EVEAAKDETADKADSDKK 387
>gi|88608214|ref|YP_506626.1| putative trigger factor [Neorickettsia sennetsu str. Miyayama]
gi|88600383|gb|ABD45851.1| putative trigger factor [Neorickettsia sennetsu str. Miyayama]
Length = 433
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 90/450 (20%), Positives = 171/450 (38%), Gaps = 26/450 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +S GLKR+ +V +P++ + F E IED K +GFR GK P + +
Sbjct: 1 MLLKEVYSHGLKRKYEVEVPASDIDAGFKEAIEDRIKKNVYRGFRKGKTPFDVVAKQ-EE 59
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ I + + +I E + E +K + ++
Sbjct: 60 GLIDSVIVDQVYRHWYDIKQNEKLVLFNN----QEEITGIDATAYKESKAAVKFTVECEL 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LPQI F + V EV EK+I++ ++ + V + + E GD+V VD
Sbjct: 116 LPQIPKIDFSQVSVKTKSFEVSEKDIEKYKQKVKEQLVDWVDLAQSDSIESGDRVVVDLR 175
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V + N + VG + + ++ L+G+K G+++ I FPED+ +AGK
Sbjct: 176 GKVGDEAFRGGQLDNFECQVGDGKVIAPLSDGLIGMKVGEERLIPVLFPEDYHDIAVAGK 235
Query: 239 KVRLNFSIKEVFSPLPVVVNNDL-AVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +K V RL +++ + + + ++RQI
Sbjct: 236 NAVFHTLVKSGKRSQKVSDPEAALLKRLSCKTDDETNEKVKSLLNLECSKRINELLRRQI 295
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ KY F VPESL+E + + + A RR
Sbjct: 296 -EAQLEKYDFQVPESLLERQERYV-----------------KVDLPSISADDLKKEAMRR 337
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
++L + NI + + ++ L + + ++ + + +
Sbjct: 338 TRLSLILAEFAAERNISIDKTDVARHLLNVSMAAGLDSSYLAEIYRNNKDFAGSVTLKLM 397
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
E K+ +L++VQ + D++ + E
Sbjct: 398 ESKIFAALLETVQKEAEASSVDEILGCTEE 427
>gi|94993133|ref|YP_601232.1| trigger factor, PPIase [Streptococcus pyogenes MGAS2096]
gi|94546641|gb|ABF36688.1| Trigger factor, ppiase [Streptococcus pyogenes MGAS2096]
Length = 264
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 93/230 (40%), Gaps = 11/230 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 30 MSTSFENKATNRGVITFTISQDKIKPALDKAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 89
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 90 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGKEWTLSAEVV 140
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V D EV ++++D ++ +N +K+ E+ GD V +D+
Sbjct: 141 TKPEVKLGDYKNLVVEVDASKEVSDEDVDAKIERERQNLAELIIKDGEAAQGDTVVIDFV 200
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPE 228
SVD V + N +GS + LVG K GD+ E+ F
Sbjct: 201 GSVDGVEFDGGKGDNFSLGLGSGQFIPGFEDQLVGAKAGDEVEVNVTFQN 250
>gi|224133304|ref|XP_002321534.1| predicted protein [Populus trichocarpa]
gi|222868530|gb|EEF05661.1| predicted protein [Populus trichocarpa]
Length = 528
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 77/455 (16%), Positives = 172/455 (37%), Gaps = 34/455 (7%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGK-VPLSHIKSLYGK 60
+V E + L V +P D + + + +A + GFRPGK VP S + S GK
Sbjct: 78 KVTETPEPNSRIRLSVEVPPAVCEDCYKRVMNEFTKQAKVPGFRPGKDVPESILLSYVGK 137
Query: 61 SILSET-IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + ++ I+K +P +S R A+R S+ I +D+ + L+ + D
Sbjct: 138 QNVQKATVESILKRTLPHAMSSVTGR-ALRDSVQIATKFTDMEKTYLSLNS-LRYDVVVD 195
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQ--------------MAEIAKNNVAFEVKET 165
+ P++ + + + + E+D + ++ + I +
Sbjct: 196 VAPEVIWIPENGYRDLKIVVEIDSEIDAQRASEQELRQRHKSLGLMRIITDRGLQIGDVA 255
Query: 166 ESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERF 225
++ +V N+ + + G + + ++G++ G+ K
Sbjct: 256 VLDVSATKIDKDESNVQNIPAAESKGFHFDTEHG-DRVIPGFLDSIIGIQRGETKSFPLV 314
Query: 226 FPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQ 283
FPE ++L G + KE+F +++ A + G + ++ QK +
Sbjct: 315 FPESWKQENLRGVHAQFTVECKELFYRDLPELDDTFADKLLPGCTTLQQVKESLLQKFLE 374
Query: 284 HSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQ------KVRFEMSSANQKSQ 337
+ Q ILD + D+P+SL E + + + +++ S
Sbjct: 375 VEQTAREQATDNAILDQLCKMVEIDIPQSLFEEQGRQLYGAKLLQIQANMKLNEQQLASL 434
Query: 338 NVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK 397
+ E L+ R + + +G I ++ N++ + E++ + + F H+++
Sbjct: 435 SSPKAVNEFLENQKENITRVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAEFKRHKQE 494
Query: 398 MLDHFQKYPNALAELRAPIFED-KVIDHILKSVQI 431
+ E + E KV++ + + +I
Sbjct: 495 Y------NEERVEEQVQEVLEGAKVLEWLREHSEI 523
>gi|40889238|pdb|1OMS|A Chain A, Structure Determination By Mad: E.Coli Trigger Factor
Binding At The Ribosomal Exit Tunnel.
gi|40889239|pdb|1OMS|B Chain B, Structure Determination By Mad: E.Coli Trigger Factor
Binding At The Ribosomal Exit Tunnel.
gi|40889240|pdb|1OMS|C Chain C, Structure Determination By Mad: E.Coli Trigger Factor
Binding At The Ribosomal Exit Tunnel
Length = 121
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 54/124 (43%), Gaps = 9/124 (7%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
QV + ++GL R + + I ++ + + + ++ K I GFR GKVP + + YG S
Sbjct: 5 QVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPXNIVAQRYGAS 64
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + + ++ + + K A P+ G + D + +++
Sbjct: 65 VRQDVLGDLXSRNFIDAIIKEKINPAGAPT---------YVPGEYKLGEDFTYSVEFEVY 115
Query: 122 PQIE 125
P++E
Sbjct: 116 PEVE 119
>gi|256420341|ref|YP_003120994.1| trigger factor [Chitinophaga pinensis DSM 2588]
gi|256035249|gb|ACU58793.1| trigger factor [Chitinophaga pinensis DSM 2588]
Length = 458
Score = 125 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/465 (11%), Positives = 153/465 (32%), Gaps = 36/465 (7%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSI 62
V + L ++ V + +F++ ++ + ANI GFR G VP+ +K ++G++I
Sbjct: 4 VTRENIGLLNDKITVKVSQEDYLPNFDKAVKQLSKTANIPGFRKGMVPVGMVKKMHGQAI 63
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
++ + + +++ + + +P + + + I + + P
Sbjct: 64 FADEVLKTVEKELMGYIQNEKVEIFAQP----LSLDKEARNFDINSPSEYNFDFEIGLKP 119
Query: 123 QIE--ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
E +T+ + + ++ ++ + E E S + + ++ +
Sbjct: 120 AFEVTPLESGKTTLTRYKIKATPEMLNEEIERLQLRGGKSEEVEAISSENNVLGLNVVET 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD---------QKEIERFFPEDHS 231
+ + + + E+ K + +F D
Sbjct: 180 DAQGTPVEGGLQKEVSFLVKNFSAATQKELQGKKKEDSIVVLASAAIDADKLVWFQHDVL 239
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ 291
+I +V +N + + E +K++ E
Sbjct: 240 GLHEDISAKYYKLTITKVELIEKRELNEEFFKEVFNAEEITTEAAFREKLQSEIEKSWDA 299
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+ + ++ + + + P L ++ LQ + +A + + D
Sbjct: 300 ESRNRLHNDLFEVLVHETPIELPKDFLKRWLQTGGEKPKTAEEADKEYPGFDH------- 352
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHE---------KKMLDHF 402
++ ++ + +N ++V+ +E++ A Q++ + G L+
Sbjct: 353 -----QLRWTLISDKLIRENQLDVSFDEVKEAAKQKVMGYFGGAAATDGADWLDSYLERL 407
Query: 403 QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ + + + K+ D V + + +VT ++ ++
Sbjct: 408 LQDEKFVDQTYREMVTQKLFDWAENKVNVKEEEVTAEEFAKLPNK 452
>gi|255528523|ref|ZP_05395305.1| trigger factor [Clostridium carboxidivorans P7]
gi|296184875|ref|ZP_06853286.1| trigger factor [Clostridium carboxidivorans P7]
gi|255507781|gb|EET84239.1| trigger factor [Clostridium carboxidivorans P7]
gi|296050657|gb|EFG90080.1| trigger factor [Clostridium carboxidivorans P7]
Length = 281
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 65/290 (22%), Positives = 128/290 (44%), Gaps = 12/290 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E +L++ + + + + K NI GFR GK P + I+ YG
Sbjct: 1 MNAKVEKIENNVVKLEITVDAQEFKGAMKKAFNKNAKKFNIPGFRKGKAPKNIIEKYYGN 60
Query: 61 SI-LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ + I+ + P+ L + D + P I I + IE D
Sbjct: 61 NVFYEDAINFCCDDTYPQALQENDVKPVDYPQIDIVQ---------IEEGKDFIYTAKVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET-ESEIGDKVTVDYT 178
++P++++ + L+V +++ EV ++EID ++ + + N E KE E G+ VD+
Sbjct: 112 VVPEVKLGDYKGLEVKKNVYEVKDEEIDNELKAMQQKNARVETKEEGSIEKGNIAVVDFK 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
VDN E K+ + +GS + LVGL GD K++ FPE++ ++L GK
Sbjct: 172 GFVDNKAFEGGEGKDYELEIGSGTFIDNFEDQLVGLNKGDSKDVVVTFPEEYGKEELNGK 231
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEF 287
+ ++K++ ++++ A F++ ++ +K +
Sbjct: 232 EATFKVTVKDIKLKELPALDDEFAKEVSEFDTIDDLKADLKEKKWKKQMN 281
>gi|124007703|ref|ZP_01692406.1| fkbp-type peptidyl-prolyl cis-transisomerase, putative [Microscilla
marina ATCC 23134]
gi|123986825|gb|EAY26597.1| fkbp-type peptidyl-prolyl cis-transisomerase, putative [Microscilla
marina ATCC 23134]
Length = 455
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 65/456 (14%), Positives = 152/456 (33%), Gaps = 18/456 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M ++ + + + + FN ++++ K +KGFRPGKVP IK +YGK
Sbjct: 1 MDIVLDKKDATNASIKIKVSEADYKQQFNSKLKEYGKKVQLKGFRPGKVPAGVIKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
IL E I+ ++ + + +P I E + + + D + +
Sbjct: 61 GILVEEINHLLSSSLSSYIVDNKLPLVGQP---IPEEQESENTIDWDNQKDFEFSYRVGL 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+ E + +++ VT V ++++ + I K E E + V
Sbjct: 118 AGEYEYNL-ENVTVTSYNVTVADEDVQEVIENIRKQQGKSENPEEVAAGDMIFGKLEQVL 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
E ++ ++ + + E +VGL+ + + +
Sbjct: 177 TKKAKDEGETAYEKDVLIDTEKVVEAEVEKIVGLEKEAHFDFTIRKFFKDGAETIKEITG 236
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
L+ + ++ + E + + E KVK I +
Sbjct: 237 -LSLEEAKQLKGKYRFTIENITRQAEAELNQDLFDNIFGPDTVNGEEEFVAKVKESIAEN 295
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ ++ + + + E N + ++ +
Sbjct: 296 FEKDTNLFLQNTIRDKVLESVDIALPDEFLKDWLYESNEGKFSKSQIEEEYEKYANERRW 355
Query: 361 GIVLGTIGEKNNIEVTEEE--------MQSALYQQLGRFPGHEKKM---LDHFQK--YPN 407
+++G I E+N+ +V ++E ++S + + P E + + +
Sbjct: 356 SLIVGRIAEENDFKVEDDEILGQAKNFVRSQIGGAMAMSPQIEDMIDSLAERYLNEDNGR 415
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ + + + DKV+D + V I + V+ +
Sbjct: 416 MVEQFESQVMYDKVLDFVKGKVNIETKDVSKSEFEK 451
>gi|255580756|ref|XP_002531199.1| Trigger factor, putative [Ricinus communis]
gi|223529201|gb|EEF31176.1| Trigger factor, putative [Ricinus communis]
Length = 542
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 78/454 (17%), Positives = 172/454 (37%), Gaps = 32/454 (7%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGK-VPLSHIKSLYGK 60
+VIE L V +P D + + + +A I GFRPGK VP S + S GK
Sbjct: 92 KVIESQEPNSTLRLTVEVPPAVCDDCYKRVMNEFMKQAKIPGFRPGKNVPESILMSYVGK 151
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ T++ ++K +P +S R A++ S+ I SD+ L+ + D
Sbjct: 152 ENVQKATVESVLKRTLPHAMSSVTGR-ALKDSVRIATKFSDMEK-DYSSLNSLRYDVIVD 209
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV---- 175
+ P+++ S + + + + E+D + +E + + + + +
Sbjct: 210 VAPEVKWMSENAYKNLKIVVEIDSDIDALRASEKELRHRQKSLGALKIVTDRGLQIGDVA 269
Query: 176 ----------DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERF 225
+ V N+ + + G + + ++G++ G+ K
Sbjct: 270 VIDISATKTDEDKSKVQNIPDAESKGFHFDTEDG-DKVLPGFLDSIIGIQRGETKSFPLV 328
Query: 226 FPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQ 283
FPE + + L G + KE+F +++ LA + G + ++ Q+ +
Sbjct: 329 FPESWNQESLRGVHAQFTVECKELFYRDVPELDDSLADKLVPGCTTLQEVKESLLQRCLE 388
Query: 284 HSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQ------KVRFEMSSANQKSQ 337
Q ILD + D+P+SL E + + + ++ S
Sbjct: 389 VERSAKDQATDNAILDQLCKMVEVDIPKSLFEEQGRQLYGARLLQIQANMRLNEQQLASL 448
Query: 338 NVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK 397
+ E L+ + + + +G I + N++ + EE+ + + F H+++
Sbjct: 449 SSPKAVNEFLENQKENITKVIKQNLAVGDIFKHENLQFSTEELVKEVENSIAEFKRHKQE 508
Query: 398 MLDHFQKYPNALAELRAPIFEDKVIDHILKSVQI 431
+ +++ + KV++ + + +I
Sbjct: 509 -----YNEESVRDQVQEILEGAKVLEWLREHAEI 537
>gi|193217038|ref|YP_002000280.1| trigger factor (prolyl isomerase) [Mycoplasma arthritidis 158L3-1]
gi|193002361|gb|ACF07576.1| trigger factor (prolyl isomerase) [Mycoplasma arthritidis 158L3-1]
Length = 473
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 63/404 (15%), Positives = 146/404 (36%), Gaps = 14/404 (3%)
Query: 8 SEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETI 67
++ + ++ + + ++ + ++R IKGFR GKVP + E
Sbjct: 7 NKKSELKISYTLEGDEWENAKEKARVELRKNVQIKGFRKGKVPAREADKHI---PVFEVW 63
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
++ IK + ++ + A + T L Y I P+I++
Sbjct: 64 EKAIKAVAQQVFR---GKLATQVEATDEIIGRASLDIEELKEEKATLVAIYPIFPEIKLG 120
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ L + + + EI+ ++ E + GD+V D+T ++ + +
Sbjct: 121 DYKKLGIKVPSLKATKDEINHVKNDLLSKFAVMVEAEDGIKNGDEVNFDFTGYIEGELFD 180
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ VGS E ++GLK ++K++ FPE++ K+LAGK+V + I
Sbjct: 181 GGEAEGYTLNVGSGTFIPGFEEQMLGLKKDEEKDLHLKFPENYHAKNLAGKEVTFHVKIN 240
Query: 248 EVFSPLPVVVNNDLAVRLGF----ESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
+++D ++ + + V ++K + +
Sbjct: 241 YTKRADYPALDDDFVKTANIHPSLKTVADFEKFVEAHALINRVNTVENEIKNLAQEKLVA 300
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLAKRRVL 359
F+VP S++E++ + Q + + E L+ + A +
Sbjct: 301 TSKFEVPTSVIEDQVHDYYQNFVNNLMQQQISEREYLDFTKTSKETLLKNFEDQAIPNLK 360
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ 403
V+ ++ VTE++ + + + + + + +
Sbjct: 361 KVFVVSATAKEEKFAVTEDDYKKEVQKLADSYGLPVENVQQFIK 404
>gi|289610058|emb|CBI60333.1| unnamed protein product [Sordaria macrospora]
Length = 202
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 56/210 (26%), Positives = 110/210 (52%), Gaps = 10/210 (4%)
Query: 41 IKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESD 100
+ GFRPGKVP + I+ ++G+++ + ++ I++ + +++++ R A P +++
Sbjct: 1 MPGFRPGKVPANLIRKMHGEALSQDALNSSIQDGIQTLIAEQKLRPATAPQVSL------ 54
Query: 101 ITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF 160
G D + +S ++LP + + D L++ + DE +D+Q+ ++A NN
Sbjct: 55 --DGTYAPGQDAAVNVSLEVLPDVPAPAIDGLKLERLTVPADESVVDQQLEQLASNNKRH 112
Query: 161 EVKE--TESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD 218
+ E E+ GD V +D+ VD V + + + + +GS L + LVG+K GD
Sbjct: 113 DEAEEGHEAATGDLVVMDFVGKVDGVAFDGGTGEGMSIEIGSGRLIPGFEDQLVGVKKGD 172
Query: 219 QKEIERFFPEDHSIKDLAGKKVRLNFSIKE 248
+K I+ FPED+ ++L GK + I +
Sbjct: 173 EKTIDVTFPEDYQAENLKGKAATFDLKITD 202
>gi|258648500|ref|ZP_05735969.1| trigger factor [Prevotella tannerae ATCC 51259]
gi|260851265|gb|EEX71134.1| trigger factor [Prevotella tannerae ATCC 51259]
Length = 448
Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats.
Identities = 61/462 (13%), Positives = 156/462 (33%), Gaps = 36/462 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + S + + + + + NE ++ + KA + GFRPGKVP S + +YG
Sbjct: 1 MNISFEKSTPVSGTITIQLVKADYAEKVNEALKKMSQKAQMPGFRPGKVPFSLVNKMYGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
E ++ ++ + + + ++ P ++ DI + D + + +
Sbjct: 61 QAKMEEVNRLLSDKLFGYIKEQKLEVLGEPMGNESQAPQDIENQ-----DDFEFKFDIAL 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+ I +V EVD+ +++ Q+ E+ + E E + +
Sbjct: 116 APEFSIELNKKDKVDYYEIEVDDAQVNSQIEEMTRQAGHPEDVEEYRDGDILRGPLTELD 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD---------QKEIERFFPEDHS 231
E + ++ + + ++ G K D ++E
Sbjct: 176 EQGQPKEGGIQVERASLMPNYFKADDQKKLFDGAKKNDVITFKPAEAHSDVEAASLLKVK 235
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ 291
++A +F ++E+ +P ++ L R+ E + KIK+ +
Sbjct: 236 KDEVAQHAGDFSFQVEEISRFVPSELDQKLFDRIFGEGQVKSEEEFRAKIKEQLQHQRVA 295
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+ L V E + N DE+ +
Sbjct: 296 DADYKFLLDARAYAENKVGELEFPKDLLRR------------FMLANNKDKDEKYVDDNF 343
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ----QLGRFPGH--EKKMLDHF--- 402
+ + + ++ + + I+V + +M+ Q ++ + + L+ +
Sbjct: 344 DSSLKELKWQLIREKLTSEAGIKVEDADMKEMAISAARFQFMQYGINNVPDEYLEKYAQE 403
Query: 403 -QKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ + + + + K+ + + V + +K++ +
Sbjct: 404 VLQKQDQARAIFDRVIDTKLTAALKEKVGLKKKKISQEDFEK 445
>gi|303232604|ref|ZP_07319289.1| trigger factor [Atopobium vaginae PB189-T1-4]
gi|302481090|gb|EFL44165.1| trigger factor [Atopobium vaginae PB189-T1-4]
Length = 492
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 66/436 (15%), Positives = 164/436 (37%), Gaps = 23/436 (5%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SI 62
+ K + + + + + + + ++I K +GFR G+ P I + GK ++
Sbjct: 7 TADKTSNDKVSVTLTVAAADVDAAIDSAYKEIAKKYAFQGFRRGRAPRPVINGIVGKDAV 66
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
L++ +E++++ P +L + D A +P + +E D + I P
Sbjct: 67 LAQATEELLEQAQPFMLDELDIVAIDKPKFA-------EDANPVEEHKDYTVSAEISIPP 119
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVD 182
E+ ++D +T + EI++Q+ + + + + D+ + D
Sbjct: 120 VCELDTYDAPSITMPPETATDAEIEQQIEQFITYSTRLVDVDDPKAVVDEKSGVVCNVED 179
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ F +G L + VG+K GD KEI E V+L
Sbjct: 180 VENATPYVGTDRHFNLGIGYLPQGLVQGFVGMKVGDTKEISWTMGEGDDAI-----TVKL 234
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
N ++ ++ + +N++ A +++ + ++ +I++ + + + +++ +
Sbjct: 235 NATLNKIQKEVVPELNDEFAKNSMGYDTVAELKAALKDEIEKDKQTSLPSLKEDRLVIEV 294
Query: 302 SNK-----YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ + N L +++ + +S +Q + ++ L H A
Sbjct: 295 GKHLTIDKVPEVYENQVFQEIGNEFLNQLQRQGTSLDQFLASRGLQFDQFLSDLHSQAND 354
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R + L I N+E T++++ ++ + K L +R I
Sbjct: 355 RARQSLALNAIARHFNLEATQDDV----IEEFKNAGKDDVDAAISEFKAAGQLPAIRESI 410
Query: 417 FEDKVIDHILKSVQIV 432
K + ++ + ++
Sbjct: 411 RRAKAVKWLVDNAKVE 426
>gi|313158066|gb|EFR57471.1| trigger factor [Alistipes sp. HGB5]
Length = 441
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 68/461 (14%), Positives = 149/461 (32%), Gaps = 35/461 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+++ + E L V + + + + + R KANI GFRPG VP+ +K +YGK
Sbjct: 1 MKIVREQREENNSLLKVTVGEEDYGQAVEKELREYRRKANIPGFRPGMVPMGLVKKMYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+L+E V E L K + + E + +
Sbjct: 61 GVLAEQAYRTASNSVFEYLQKENIDYLGD-----VIPSEEQGDFDFENGKEFEFVFEIGE 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P+I++ D ++T +VD+K D A + + +
Sbjct: 116 APEIKLELSDKDKLTYSKIKVDKKMHDDYRANYLRQYGRLVDADEVTSDEALSVTLDNGE 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ + + V + + +R +L G K
Sbjct: 176 MNVADAYVGLISMSEEERKPFIGKKVGFKTEVNVNELYKNPSQRAAVLQVKENELEGIKP 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLG----FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I ++ +N + + E+ + +I+ Q
Sbjct: 236 EFTLEITKIRKFAEPELNEEFFKTAFPGGEVKDEAGLDKFIDARIEPELRRESDYLFTLQ 295
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ DY+ K +PE+ ++ I N ED+ +
Sbjct: 296 LRDYLVQKAGLKMPEAFLKRWLYTI----------------NEGKFSMEDIDKDFDQFLK 339
Query: 357 RVLTGIVLGTIGEKNNIEVTEE----EMQSALYQQLGRFPGH--EKKMLDHFQK----YP 406
+ +++NI VT++ E ++ Q ++ + ML + +
Sbjct: 340 MFTWNYLQKHFIKQDNITVTKDEALAEAKALAAAQFAQYGMPSAPEDMLAGYAEKILADK 399
Query: 407 NALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ ++E KV++ + +++ ++ V+ D +
Sbjct: 400 DQGQKIYEKLYEVKVVEDVKSKIKVTEKAVSADDFAKLAKA 440
>gi|313675244|ref|YP_004053240.1| trigger factor [Marivirga tractuosa DSM 4126]
gi|312941942|gb|ADR21132.1| trigger factor [Marivirga tractuosa DSM 4126]
Length = 447
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 74/462 (16%), Positives = 172/462 (37%), Gaps = 29/462 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + +I+ + ++I++ R ANIKGFRPGKVP S+IK LYGK
Sbjct: 1 MDITLNKKDNTNASIKIILNEADYQPNVEQKIKEYRKNANIKGFRPGKVPASYIKKLYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L E I+ ++ + + + + + D R P + D + D + + +
Sbjct: 61 SVLVEEINSLLSKSLTDYIKENDLRILGEPIP----NQEDAAKIDWDNQKDFEFEYTLGL 116
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+ + +I D +V + EV +K + M + K + E E +
Sbjct: 117 VDEFKIPLDDKFKVEKHSIEVTDKVMKETMDNLTKQHGDTESVEE---------SKSEDT 167
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ + + + ++ D + + VG+K GD+ + + + + + +
Sbjct: 168 LEGKLSTADGEVQEKVVLPIEDAEKKAQKQFVGVKKGDEVKFDI--EKTFKSAEAKSRLL 225
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
N + E S ++ +D+ E + K + +KVK I +
Sbjct: 226 GQNETDAEAASGEYILSVSDIKRTKPAEINQELFDKVFGKDAVKTREEFEKKVKETIAEN 285
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ + LV++ + + E N + +E + + L + +
Sbjct: 286 YDRETENLLNRDLVDSLVDKTKFDLPDEFLKNWLLLSNEGKVTQEQIDKEYDLYTKDLRW 345
Query: 361 GIVLGTI--GEKNNIEVTEEEMQSALYQQLG----------RFPGHEKKMLDHFQK--YP 406
++ I +++I+V ++ + + + + ++ +
Sbjct: 346 NLIKNKIADANQDDIKVEHTDVMDYTKKMIAEQFGAYGMADQLGENMDSFAQNYLQGENG 405
Query: 407 NALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
++ + +V+D I + I ++KV D ++
Sbjct: 406 ENYRKVYEEMLNKRVLDFIKDKITIKEKKVDLDGFKKAVDKN 447
>gi|23336336|ref|ZP_00121558.1| COG0544: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger
factor) [Bifidobacterium longum DJO10A]
gi|46190416|ref|ZP_00206460.1| COG0544: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger
factor) [Bifidobacterium longum DJO10A]
Length = 189
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 80/192 (41%), Gaps = 6/192 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++ + E K +L V + L + ++I + N+ GFR G VP I G
Sbjct: 1 MKISVRNLEPTKVKLTVTVEPEELNPYLDAARKEIAKQVNVPGFRKGHVPGKIIDQRIGF 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
++ E +++ + E+ + L ++ R +P + + LK + +
Sbjct: 61 AAVAGEAVNDAVPELYSKALDEKKIRPMAQPEFDVQD-----VPQSANDETKLKFTATVE 115
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P IE+ D L++ EV ++++D+++ + + + + GD +D T
Sbjct: 116 RRPDIELPEIDGLEIAISKPEVKDEDVDKRLETLRQRFGTLVGVDRPAAKGDFANIDLTA 175
Query: 180 SVDNVILEDQSK 191
+D ++ Q
Sbjct: 176 EIDGETVDSQEG 187
>gi|302757988|ref|XP_002962417.1| hypothetical protein SELMODRAFT_78010 [Selaginella moellendorffii]
gi|300169278|gb|EFJ35880.1| hypothetical protein SELMODRAFT_78010 [Selaginella moellendorffii]
Length = 440
Score = 123 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 83/441 (18%), Positives = 170/441 (38%), Gaps = 29/441 (6%)
Query: 13 RELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KSILSETIDEII 71
L V +P N + ++E + D K +KGFRPGKVP + S G K + SE + I+
Sbjct: 1 VRLKVRVPGNLCKEIYDETLLDFSKKVKVKGFRPGKVPEWVLLSQIGQKRVESEAVKLIL 60
Query: 72 KEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDD 131
++ +PE ++ RA + + D T L ++ D++P +E +S D
Sbjct: 61 EKTLPEAMASVAGRALKDSEEIVTKF--DSLLAAFTPTSPLSYHVAVDVIPDVEWTSKDA 118
Query: 132 LQVTQDICEVD-----EKEIDRQMAEIAKNNVAFEVKETESEIGDKV--------TVDYT 178
+ E + D ++A K+ + V + V ++
Sbjct: 119 YKHMVLEVEGRDDIGVQNAADAELASRHKDLGSLRVVTGRGLEMNDVVIIDISAARINSD 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++ + IL K S + ++G K G+ + + FP D + + L
Sbjct: 179 GTIGDKILSCTQKGFSLDTEESTSYIPGLVQNMMGQKGGETRTFDLVFPPDWNQEHLRNI 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K R KEVF + +N+++A + G ++ ++ +K + E + +
Sbjct: 239 KARFTVECKEVFLRVVPDLNDEIAEKLVEGCKTLEQVKQALLKKHQLIEENNRKNAARGA 298
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQ------KVRFEMSSANQKSQNVDSIDEEDLQYY 350
+L+ +S VP+SL+E + I ++ + + + ++
Sbjct: 299 VLEKLSKVAKIQVPKSLLEEQGRQIYAAKLMELHIKQRFDKKQMEPLTSEEMVNNFIRVK 358
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
H V I + I ++ T +E+++ + + E K+ +
Sbjct: 359 HDEISATVRQSIAVAEIFRLEKLQYTRDELEAEVKSAI-----DEFKIYNQEYDEKKVRE 413
Query: 411 ELRAPIFEDKVIDHILKSVQI 431
+ + + KV+D +L+ I
Sbjct: 414 QAQEMLEGAKVLDWLLEQADI 434
>gi|149194681|ref|ZP_01871776.1| trigger factor [Caminibacter mediatlanticus TB-2]
gi|149135104|gb|EDM23585.1| trigger factor [Caminibacter mediatlanticus TB-2]
Length = 428
Score = 123 bits (307), Expect = 8e-26, Method: Composition-based stats.
Identities = 84/390 (21%), Positives = 183/390 (46%), Gaps = 14/390 (3%)
Query: 43 GFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILSKRDE-RAAMRPSITINEGESDI 101
GFRPGKVP+ ++ +Y + I + I E +KE++ E + + P + I
Sbjct: 42 GFRPGKVPVKVVEKMYAEEIKRDAISEAVKEVLDEGIKQLGANEIIGEPQV--------I 93
Query: 102 TSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE 161
E +D+++++ I+ S + + +E+ + + +
Sbjct: 94 KFDEKEDGIDVEIKVFTKPEVNIDDSYKECVPDVTLPEVSEEEIEEELKKIAKQFAESKV 153
Query: 162 VKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKE 221
V + E GD +D+ +D+ +E+ S ++ +GS + L+G+K G+ K+
Sbjct: 154 VDKESLEKGDVAVIDFKGYIDSKPMENGSAESYPLEIGSGSFIEGFEDQLIGMKVGESKK 213
Query: 222 IERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCS 278
I+ FP+++ K++AGK+ + +++E+ +P +N+DLA + + + ++
Sbjct: 214 IKVKFPKNYGAKEIAGKEAEFDVTLQEIQEKVPAEINDDLAKKYMNDENATLETLKNYIK 273
Query: 279 QKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-KSQ 337
I Q + +K QIL+ + KY FD+PE++V+ E + I+ +++ A + Q
Sbjct: 274 DSILQRKKAETFAPLKEQILECLVEKYNFDLPENIVDQEVDVIVGNEAAKLTPAEIKELQ 333
Query: 338 NVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK 397
+E + + AK RV ++ I +K N+ V +EE+ LY + + +
Sbjct: 334 ENPEKLKEFREKFVDEAKNRVKLTFIIDVIAKKENVSVNDEELTQILYYEALMQGQNPTE 393
Query: 398 MLDHFQKYPNALAELRAPIFEDKVIDHILK 427
+ Q+ + L+ + ++K+++ +L+
Sbjct: 394 YIKQVQE-QGLIPVLKMNLIQEKLLNKLLE 422
>gi|329576869|gb|EGG58354.1| trigger factor [Enterococcus faecalis TX1467]
Length = 371
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 60/382 (15%), Positives = 154/382 (40%), Gaps = 23/382 (6%)
Query: 57 LYGKS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLR 115
+YG+ + + ++ ++ E + + +P I + D +
Sbjct: 1 MYGEEALYEDALNAVLPEAYEAAVLEAGIEPVAQPKIDVESM---------NKGEDWVIT 51
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVT 174
+ P++++ + +L V++ EV +++++ ++ ++ ++ +E GD V
Sbjct: 52 AEVTVKPEVKLGEYKNLTVSKQDREVTDEDVEARLKREQESQAELVIKEDAAAENGDTVV 111
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+D+ + + E +N +GS + LVG K G++ E+ FPED+ +D
Sbjct: 112 IDFEGFLGDEAFEGGKGENYSLELGSNSFIPGFEDQLVGKKAGEEVEVNVTFPEDYQAED 171
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQK 292
LAGK+ ++ EV + ++++ A ES ++ +++ + E +
Sbjct: 172 LAGKEAVFKVTVHEVKAKELPELDDEFAKDVDDSVESLDELKEKFRKELTEAKEAAAEEA 231
Query: 293 VKRQILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDL 347
+ + ++P +V +E + + + M + +E+
Sbjct: 232 KDEEAIRLAVENAEIVELPHVMVHDEVHRSMDEFLNNMQRQGISPEMYYQLTGSTEEDLH 291
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + A+ R T +V+ + + NIEVT+E++ + + ++ E ++
Sbjct: 292 KQFEGEAETRTKTNLVIEAVAKAENIEVTQEDIDAEVKDLAEQYNMPEAQVRKVLNND-- 349
Query: 408 ALAELRAPIFEDKVIDHILKSV 429
L I + ++ I ++
Sbjct: 350 ---MLEHDIRMKRAVETITETA 368
>gi|168022075|ref|XP_001763566.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685359|gb|EDQ71755.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 69/447 (15%), Positives = 161/447 (36%), Gaps = 32/447 (7%)
Query: 11 LKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGK-VPLSHIKSLYG-KSILSETID 68
L+ +L V +P + D +++ +++ ++ + GFRPGK +P + + + G I S ++
Sbjct: 3 LQVQLKVHVPVSVCKDCYDQVLKEFGKQSKVPGFRPGKNIPENVLINFIGQDQIRSSAVE 62
Query: 69 EIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISS 128
++K +PE +S RA + + L ++ D+ P+I+ +
Sbjct: 63 AVLKRTLPEAMSSVAGRAIKDSEHISTKFAD--LAAGFAPDKPLSYDVAVDVAPEIKWNP 120
Query: 129 FDDLQVTQDICEVDEKEIDRQ--------------MAEIAKNNVAFEVKETESEIGDKVT 174
+ + + E + + + + +
Sbjct: 121 ENGYKNLKVTVECEADDALAAQKAADAELLSRLKDLGSLRVVIGRGLEMGDVGVVDVSAV 180
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGS-ADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+ +K + E L+G++ + + + FP +
Sbjct: 181 RLNEDGTTGDEILSCKQKGFRLDTDEGGSFLPGFVEALIGIQNDESRSFDLTFPPTWEQE 240
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQ 291
L G + R +E+F +N++LA +L + S ++ +K + E +
Sbjct: 241 SLRGLQARFTVVGREIFIRQLPELNDELAPQLFQDCTSLAEIKEALLRKHTELIERAKKT 300
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV------DSIDEE 345
+ I ++ DVP SL+E + + E+ ++ + S+ +
Sbjct: 301 ATQFAITTELAKVAEIDVPNSLLEEQGRQMYASKLIELQASMKLSKEQVVALSSAEMVHN 360
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
L V + + I + N+E++EEE+Q+ + + F +++ + +
Sbjct: 361 YLIAQKPRITESVKQSLAVAEIYKLENLEISEEELQAEVDSAIEEFKRFDQEY-EVVRVK 419
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIV 432
A L KV+D + + I
Sbjct: 420 EQARELLEGS----KVLDWLTEHADIT 442
>gi|256371558|ref|YP_003109382.1| trigger factor [Acidimicrobium ferrooxidans DSM 10331]
gi|256008142|gb|ACU53709.1| trigger factor [Acidimicrobium ferrooxidans DSM 10331]
Length = 502
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 75/507 (14%), Positives = 188/507 (37%), Gaps = 52/507 (10%)
Query: 1 MQVIEKFSEGLK-RELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M+ S+ + + V S+ L F+E + ++ + + GFR GK+P + G
Sbjct: 1 MRSTTSTSDDRRSATVTVEFESDELASKFDEVLARLQQQVRLPGFRRGKIPRQLLVRRIG 60
Query: 60 -KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ ++ E + +I+E V ++L++ RP++ E + + L
Sbjct: 61 EEELVREAAEALIEERVGDLLAESGLDVIGRPALARVEARPEGGAEA---------ELRV 111
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
++ P +E++ + D++V + +E+DR + EI + + GD+VT++
Sbjct: 112 ELRPSVEVAGWRDIEVRVPDPRLTSEEVDRVIREILEQRAEVRDVDRPVAEGDQVTLNVW 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS----IKD 234
+ + +G + + E LVG G + E
Sbjct: 172 RVESDGTEALVTPDL-VVRLGRGQVPRDIEEALVGAVVGARVERPVPHETPTDAGATTDA 230
Query: 235 LAGKKVRLN-------------------FSIKEVFSPLPVVVNNDLAVRLGFE-SESAMR 274
AG+ + ++ + + ++L + + + +A+R
Sbjct: 231 EAGEAGDAEDASPADAPPQAAADAPRELYEVRAIREIVVPEATDELVEEVTGQPTLAALR 290
Query: 275 GLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFD-VPESLVENEYNGILQKVRFEMSSAN 333
++ ++ + +L + + VP +LV+ + +++ + ++
Sbjct: 291 EAVEGDLRSARLRRAQEAFEAGVLAALLERTEPKTVPNTLVDPVFQQEIRRFGSSLDASG 350
Query: 334 QKSQNV-----DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQL 388
+ S D+ A+ + + L I ++EVT+EE+++ + + +
Sbjct: 351 ISLRRYLDLTGQSRDDIARSLTERSAETVL-IDLALRAIARDADLEVTDEELRAEVDRLV 409
Query: 389 GRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVD---RKVTFD--QLFD 443
+++ P +L A + K + + + V +V +T D +L +
Sbjct: 410 ATGQIRDREEAAR----PAIETQLVADVLLRKALALLQREVHVVSESGEALTLDDLELAN 465
Query: 444 NSSESSPEKLLDKSSKVETFQSEEAPS 470
++ + ++ +EEA +
Sbjct: 466 AIADVLGDAPPTAEEELPGSIAEEAST 492
>gi|126215776|gb|ABN81008.1| putative FKBP-type bacterial trigger factor [Rhodococcus opacus]
Length = 202
Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 14/215 (6%)
Query: 33 EDIRSKANIKGFRPGKVPLSHIKSLYGK-SILSETIDEIIKEIVPEILSKRDERAAMRPS 91
+ + + + GFRPGK P +++ G+ ++L + +++ + E ++ +A +P
Sbjct: 1 KALAQQIRLPGFRPGKAPAKLLEARVGRGAVLEQVVNDALPSRYSEAVTSASVKAIGQPE 60
Query: 92 ITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMA 151
I I + IE L+ D+ P+I + + +L VT D E+ ++ ++ Q+
Sbjct: 61 IEITK---------IEDGELLEFTAEVDVRPEITLPDYSELSVTVDPIEITDEAVEEQLL 111
Query: 152 EIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEIL 211
+ + E E GD +++D + +VD + + + + VGS L E +
Sbjct: 112 SLRQRFGTLTGVERAVEDGDFISIDLSATVDGEAVPEATASGLSHEVGSGQLIEGLDEAV 171
Query: 212 VGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSI 246
VG+K G+ KE D AGK+ + ++
Sbjct: 172 VGVKAGESKEFTSTLVAG----DHAGKEAVVTVTV 202
>gi|332099011|gb|EGJ03951.1| bacterial trigger factor protein family protein [Shigella
dysenteriae 155-74]
Length = 88
Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 44/88 (50%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAM 88
S+ + + +++ + + K A
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKINPAG 88
>gi|194246691|ref|YP_002004330.1| Trigger factor (TF) [Candidatus Phytoplasma mali]
gi|193807048|emb|CAP18484.1| Trigger factor (TF) [Candidatus Phytoplasma mali]
Length = 437
Score = 121 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 74/437 (16%), Positives = 177/437 (40%), Gaps = 20/437 (4%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KSIL 63
K + I + L ++ I+ K + KGFR G +P+ + + +
Sbjct: 3 IKKISDYRIIYYFCINVDELEKKLSDNYNLIKDKISFKGFRKGHIPIKVFQKFFNTDYLY 62
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
++ +E+I + EIL + +P + D+ + + L L +++P+
Sbjct: 63 NKVFEELITQKYQEILKDKKLEIIGQPEL------IDLKPYPFDFSHPLNFGLDVNLVPK 116
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMA-EIAKNNVAFEVKETESEIGDKVTVDYTVSVD 182
I++ + L++ + ++E+ + ++ V + E+ D D+ ++
Sbjct: 117 IDLCKYKGLEIIKKNFNIEEEIKIKIKHLLEKQSIVEDKKSNLFLELRDIAIFDFEGFIN 176
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
E K+ +GS E ++G+K ++KEI FP D+ +K+L +K
Sbjct: 177 KKPFEGNQAKDFSLEIGSGMFIPGFEESMIGMKIKEKKEIHIIFPSDYHVKNLVNQKAIF 236
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLGF---ESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
N +K + PVV+++++ ++ F E+ ++ + ++ + F ++ K QIL+
Sbjct: 237 NVFLKAIKIKKPVVLSDEVVKKMNFKNIENIFELKKNIKKNLEIENNFKEQKYFKEQILN 296
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR--- 356
+I N D+ + ++ +Q ++ ++ + + + +
Sbjct: 297 HIINNSYVDISKYFLDKMKEQEIQNLKTKIMKEKITLEQYLISLNISKKKFEKNIEEKIF 356
Query: 357 -RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ I+L I EK + V E E++ + + + +H+ ++
Sbjct: 357 HKFKWEILLKKIIEKEKLTVLETEIEQIKQEINKVDNKNIQVNKNHYSSS-----RIKNY 411
Query: 416 IFEDKVIDHILKSVQIV 432
+ E+KV + I+ I
Sbjct: 412 LLEEKVFNFIISKAIIK 428
>gi|302799938|ref|XP_002981727.1| hypothetical protein SELMODRAFT_115111 [Selaginella moellendorffii]
gi|300150559|gb|EFJ17209.1| hypothetical protein SELMODRAFT_115111 [Selaginella moellendorffii]
Length = 440
Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats.
Identities = 81/441 (18%), Positives = 169/441 (38%), Gaps = 29/441 (6%)
Query: 13 RELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KSILSETIDEII 71
L V +P N + ++E + D K +KGFRPGKVP + S G K + SE + I+
Sbjct: 1 VRLKVRVPGNLCKEIYDETLLDFSKKVKVKGFRPGKVPEWVLLSQIGQKRVESEAVKLIL 60
Query: 72 KEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDD 131
++ +PE ++ RA + + D T L ++ D++P +E +S D
Sbjct: 61 EKTLPEAMASVAGRALKDSEEIVTKF--DSLLAAFTPTSPLSYHVAVDVIPDVEWTSKDA 118
Query: 132 LQVTQDICEVD-----EKEIDRQMAEIAKNNVAFEVKETESEIGDKV--------TVDYT 178
+ E + D ++A K+ + V + V ++
Sbjct: 119 YKHMVLEVEGRDDIGVQNAADAELASRHKDLGSLRVVTGRGLEMNDVVIIDISAARINSD 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
++ + IL K S + ++ K G+ + + FP D + + L
Sbjct: 179 GTIGDKILSCTQKGFSLDTEESTSYIPGLVQNMMDQKGGETRTFDLVFPPDWNQEHLRNI 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
K R KEVF + +N+++A + G ++ ++ +K + E + +
Sbjct: 239 KARFTVECKEVFLRVVPDLNDEIAEKLVEGCKTLEQVKQALLKKHQLIEENNRKNAARGA 298
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQ------KVRFEMSSANQKSQNVDSIDEEDLQYY 350
+L+ +S VP+SL+E + I ++ + + + ++
Sbjct: 299 VLEKLSKIAKIQVPKSLLEEQGRQIYAAKLMELHIKQRFDKKQMEPLTSEEMVNNFIRVK 358
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
H V I + + ++ T +E+++ + + E K+ +
Sbjct: 359 HDEISATVRQSIAVAEVFRLEKLQYTRDELEAEVKSAI-----DEFKIYNQEYDEKKVRE 413
Query: 411 ELRAPIFEDKVIDHILKSVQI 431
+ + + KV+D +L+ I
Sbjct: 414 QAQEMLEGAKVLDWLLEQADI 434
>gi|50365223|ref|YP_053648.1| trigger factor, prolyl isomerase [Mesoplasma florum L1]
gi|67461750|sp|Q6F159|TIG_MESFL RecName: Full=Trigger factor; Short=TF
gi|50363779|gb|AAT75764.1| trigger factor, prolyl isomerase [Mesoplasma florum L1]
Length = 426
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 77/438 (17%), Positives = 160/438 (36%), Gaps = 24/438 (5%)
Query: 1 MQVIE-KFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M+ E K E + + V I T++ + + + + GFR GK+P + +
Sbjct: 1 MKFTELKIIEQGQGKWTVTIDGTEWTETLKKAKNRVLANLEVPGFRKGKIPAAQAEKYVT 60
Query: 60 KS-ILSETIDEIIKEIVPEI-LSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
S I +E ++ + P + +IE DLK +
Sbjct: 61 PSKIYNEAYRMMVSPAFDFARAQEVKVEPMNSPEPIPAKVSE--KELVIEFLFDLKPEIK 118
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
I+ + ++VT++ E + Q + + E GD VT D+
Sbjct: 119 LGDYKNIKTVKKETVEVTKEEIEAVIDQYCEQFIMEKPKAA-----DAKIEKGDIVTFDF 173
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
++ + K + ++GS + ++GL G+ +I+ FPE + +LA
Sbjct: 174 KGFMNGEAFKGGEAKGHKLVIGSNQFIPGFEDSMIGLGLGE-AKIDVTFPEGY-TPELAN 231
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
K +I EV + +++L E+ + + I + V+ +
Sbjct: 232 KPATFELNIIEVKARELPKKDDELVKDLNLPNVETFAQFEAKVKEDITKQKLQNVKNQFV 291
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYY 350
+++ I T ++P++ +EN+ + ++ ++ + DE
Sbjct: 292 NDLINEIIKNSTIELPKTAIENQTADLRKEFEAQLKQQGLDIKKYKKVTGLSDEAIKAEL 351
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
AK ++ T +V I K EVTEE + + +F ++ P
Sbjct: 352 TADAKNKLETYLVTSEIRSKEKFEVTEEAINAKFENLAAQFGIPADQIKTMV--NPEM-- 407
Query: 411 ELRAPIFEDKVIDHILKS 428
L++ I D ++D + +
Sbjct: 408 -LKSEIVNDLLVDFLYSN 424
>gi|77407073|ref|ZP_00784077.1| trigger factor [Streptococcus agalactiae H36B]
gi|77174315|gb|EAO77180.1| trigger factor [Streptococcus agalactiae H36B]
Length = 367
Score = 120 bits (299), Expect = 7e-25, Method: Composition-based stats.
Identities = 78/374 (20%), Positives = 149/374 (39%), Gaps = 22/374 (5%)
Query: 67 IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEI 126
I+ + + +++ +P I + E D KL P++++
Sbjct: 8 IEFXVPKAYEAAVAELGLDVVAQPKIDVVSM---------EKGQDWKLTAEVVTKPEVKL 58
Query: 127 SSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ DL V D EV ++E+D ++ N VK+ E+ GD V +D+ SVD V
Sbjct: 59 GDYKDLSVEVDASKEVSDEEVDAKVERERNNLAELTVKDGEAAQGDTVVIDFVGSVDGVE 118
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ N +GS E LVG K G ++ FPED+ +DLAGK + +
Sbjct: 119 FDGGKGDNFSLELGSGQFIPGFEEQLVGSKAGQTVDVNVTFPEDYQAEDLAGKDAKFVTT 178
Query: 246 IKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD-YIS 302
I EV + ++++LA E+ ++ ++++ E V+ ++ ++
Sbjct: 179 IHEVKTKEVPALDDELAKDIDEEVETLDELKAKYRKELESAKEIAFDDAVEGAAIELAVA 238
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKRRV 358
N ++PE +V +E + + + M + +E+ + Y A +RV
Sbjct: 239 NAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYQADADKRV 298
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
T +V+ I E T+EE++ + + ++ L+ I
Sbjct: 299 KTNLVIEAIAAAEGFEATDEEIEKEITDLASEYNMEADQVRGLLSAD-----MLKHDIAM 353
Query: 419 DKVIDHILKSVQIV 432
K +D I S +
Sbjct: 354 KKAVDVITSSATVK 367
>gi|146299461|ref|YP_001194052.1| trigger factor domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146153879|gb|ABQ04733.1| trigger factor, N-terminal domain protein [Flavobacterium
johnsoniae UW101]
Length = 440
Score = 120 bits (299), Expect = 7e-25, Method: Composition-based stats.
Identities = 74/463 (15%), Positives = 165/463 (35%), Gaps = 48/463 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + + + + +RI + A +KGFR G VP ++ YGK
Sbjct: 1 MDIKRVAIDAVNETIVMNVVHMDYKGQVAKRINEKMPLAQVKGFRKGAVPKDLVEKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I E I +++ + + P +NE + +L +
Sbjct: 61 AIKQEEIKKVVDLALERYIQSERLNLLGTPLAKVNENFN-------WDAEELIFEYEIGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P EI + + I D+K ID Q+ I K ++ +
Sbjct: 114 VPNFEIDLEAKNNIVKYIVTADDKLIDGQVERIQKQFGKAIPQDKA---------EADSD 164
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD--QKEIERFFPEDHSIKDL--- 235
+ + + N + + + VG K GD + F +DH + D
Sbjct: 165 LTGTFSSEANGINNTTTISVGAFSKKAQKQFVGKKVGDVVTVSTKGLFDDDHQLMDYLKV 224
Query: 236 -----AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR 290
G V +NF+I+ + P +N +L +L E A KIK+ +E
Sbjct: 225 GHEGVHGLDVEVNFTIEAINGSEPAELNQELFDKLFGEGNVASLEDLKAKIKEDAEAQFA 284
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
Q+ +++L + + + L E ++ + E+ +
Sbjct: 285 QQADQKLLLDVQDFLIENTKFDL------------PAEFLKKWLQTVGEKKLSAEEAEIE 332
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPG------HEKKMLD 400
+ +++ + ++ G ++NI++T ++++ + QQ+ +F + ++
Sbjct: 333 YARSEKGLRFQLIEGKALAQSNIQITFDDLKEFTSNAIRQQMAQFGQVNPSDEEVQGIVA 392
Query: 401 HFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ + L + K++D + ++VT+++
Sbjct: 393 RVLSNQDEVKRLSEQVVAAKMLDIFKEKANPTTKEVTYEEFIA 435
>gi|325955072|ref|YP_004238732.1| trigger factor [Weeksella virosa DSM 16922]
gi|323437690|gb|ADX68154.1| trigger factor [Weeksella virosa DSM 16922]
Length = 446
Score = 119 bits (298), Expect = 8e-25, Method: Composition-based stats.
Identities = 73/466 (15%), Positives = 173/466 (37%), Gaps = 30/466 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L + V I + ++ ++ + ANIKGFR G VP+S +K Y K
Sbjct: 1 MNITKNTTGNLSAVISVAIDKADYQEKVDDVLKQYKKTANIKGFRKGHVPMSFVKKQYEK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + ++E++++ + +++ P I + + D + + ++ L ++
Sbjct: 61 PVIFDVVNELLQKELNNYINEEKISILGNP-IPVAQDNIDWDADQLTFDFEIGLAPEIEV 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
++V V ++E+D+ + A+ E +T E
Sbjct: 120 -------DLKAIEVPAYEIYVSDEEVDKYVKNFAQRYGKMENVDTVEENTVLKVEVKEKE 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ + + + + K ++E + S + V
Sbjct: 173 NEDAVKNAYIRLDEVKDQKVFVGKKVNDTFDINTKEIFEEEENAENVFNLSKEAFVDGGV 232
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
L +IKE+ ++ +L ++ E KIK SE + ++ RQ+++
Sbjct: 233 ELVMTIKEINKITDAAIDQELFDKVYGEGSVDSEEAFRDKIKSESEKMYAKETDRQLMNE 292
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ K + L E LQ ++S Q ++ I + +
Sbjct: 293 VVEKVIENTKVELPEEFLIKWLQFSNENITSEEQAKDELEKIS------------KSLKY 340
Query: 361 GIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFPGH--EKKMLDHF----QKYPNALA 410
++ + E IEVT +E+++ + +QL + + ++ +
Sbjct: 341 QLIESRLAEAKEIEVTADEVKAEAEKAIREQLAMYGQNAIPEETMQSIIGSALTNQEEYN 400
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDK 456
L +F DK++ + V++ +KVT D+ ++ + + +
Sbjct: 401 RLSYQVFTDKMLAVYKEGVKMSPKKVTLDEFIAIVTKENKDLEEEA 446
>gi|332098688|gb|EGJ03654.1| bacterial trigger factor protein family protein [Shigella boydii
3594-74]
gi|332763733|gb|EGJ93971.1| bacterial trigger factor protein family protein [Shigella
flexneri K-671]
gi|333007863|gb|EGK27339.1| bacterial trigger factor protein family protein [Shigella
flexneri K-218]
gi|333021846|gb|EGK41094.1| bacterial trigger factor protein family protein [Shigella
flexneri K-304]
Length = 106
Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEI-LSKRDERAA 87
S+ + + +++ + + ++ R A
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKSIRLA 88
>gi|194476908|ref|YP_002049087.1| trigger factor [Paulinella chromatophora]
gi|171191915|gb|ACB42877.1| trigger factor [Paulinella chromatophora]
Length = 440
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 66/391 (16%), Positives = 159/391 (40%), Gaps = 7/391 (1%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KS 61
+ + L++ IP+ R +N IE + I GFR K+P S + G +
Sbjct: 7 IKASKRPHSRIALELTIPAKRCQVDYNAAIEKLSLNLIIPGFRKNKIPRSVMIKQIGLEK 66
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
I + ++ +I+ + E+L + A +P + D + D+ + L D+L
Sbjct: 67 IYTVALESLIESVYIEVLDQESIEAIGQPEL---NKSFDRLLECFNPSSDIIVILETDVL 123
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P+ + +L + D ID + + K ++ + ++V
Sbjct: 124 PKPILKKTKELIAIVQPLDPDIFNIDELLEQSRKRLTTSKLVKNRPARSGDISVINFTGS 183
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
E NV+ + + + TE ++G++ ++K+IE F E H KD G+K
Sbjct: 184 YKDNREIIHSDNVEINLEDHYMLTGLTEGIIGMRINEKKDIECQFSESHVKKDTLGRKAI 243
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
N ++K++ +N+ A ++ + ++ +K+ + + + ++
Sbjct: 244 FNVTLKQLKVRENPTLNDAFAKQVSESLTLLELQSELKIHVKKEIDLHTQFNRQEALVKA 303
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID--EEDLQYYHMLAKRRV 358
+ + ++PE+L++ E ++++ +++ + + + + + + A++ +
Sbjct: 304 LIEQLELEIPETLIQQEIYYLIEQTARKLAQKGTDVKRLFTPELVRSLMNTSRVEAEKNL 363
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLG 389
+ L T+ E I V+ E+ + Q
Sbjct: 364 RRSLALKTLAEVEKIVVSANEINEKINQISE 394
>gi|323164236|gb|EFZ50043.1| bacterial trigger factor family protein [Shigella sonnei 53G]
Length = 106
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEI-LSKRDERAA 87
S+ + + +++ + + ++ R A
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKSIRLA 88
>gi|757798|emb|CAA59931.1| tig smaller protein [Campylobacter jejuni]
Length = 388
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 74/389 (19%), Positives = 158/389 (40%), Gaps = 21/389 (5%)
Query: 24 LTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILSK-- 81
+ + + GFRPGKVP+S + Y + + + + K V L +
Sbjct: 2 IKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYERELSQDAEQNLFKSAVNSALQELK 61
Query: 82 -RDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICE 140
++ P ++ L P+I++ ++ L +
Sbjct: 62 KENKELVGEPYFE----------KFDRKDGEIIAELILSFKPEIKLEGYEKLIPEYQTPK 111
Query: 141 VDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYTVSVDNVILEDQSKKNVQFIV 198
V +KEID + E+ K E +T+ + GD D+ VD+ E +N +
Sbjct: 112 VSKKEIDEKKDELLKRFATPEAIKTKRALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEI 171
Query: 199 GSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVN 258
GS + +VG+K G++K+I+ FP+++ + LAGK + E+ ++
Sbjct: 172 GSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGARHLAGKDAVFKVKLHEIQELKIPELD 231
Query: 259 NDLAVRLGFESESAMRGLCSQKIKQHSEFLV-----RQKVKRQILDYISNKYTFDVPESL 313
+++ +L E A + +K+K+ + ++K + D + KY FD+P+ +
Sbjct: 232 DEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGI 291
Query: 314 VENEYNGILQKVRFEMSSANQ-KSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNN 372
VE E + ++ + + +E + A++ V ++ + +
Sbjct: 292 VEQETDMQMRAAFNTFCEKEIEELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRK 351
Query: 373 IEVTEEEMQSALYQQLGRFPGHEKKMLDH 401
IEV ++E+ A+Y + R+ ++ ++
Sbjct: 352 IEVNDQELIQAIYFEAYRYGMIQRAFRNY 380
>gi|323153472|gb|EFZ39726.1| bacterial trigger factor family protein [Escherichia coli
EPECa14]
Length = 106
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ KA I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKARIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEI-LSKRDERAA 87
S+ + + +++ + + ++ R A
Sbjct: 61 SVRQDVLGDLMSRNFIDAIIKEKSIRLA 88
>gi|229496369|ref|ZP_04390089.1| putative trigger factor [Porphyromonas endodontalis ATCC 35406]
gi|229316947|gb|EEN82860.1| putative trigger factor [Porphyromonas endodontalis ATCC 35406]
Length = 459
Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 62/478 (12%), Positives = 146/478 (30%), Gaps = 41/478 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + V I + + E++ +IR + ++ GFR G VP + YG
Sbjct: 1 MNSTFTTEAPRRGIVTVSIEAADYEKAVKEQLRNIRQRMDMPGFRKGMVPQGIVTKKYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+ E I++++ + + E L + + +P I +E D +
Sbjct: 61 SVKIEEINKMVGDKLFETLRENNVEFLGQPMIQP-------NDQDLEKGSDFTFSFHLAL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P I D+++ +V EK+ID + + + + E E + +
Sbjct: 114 TPDFNIPLSSDVKLPYYTVKVGEKDIDEADNYMRRAYGSMQQAEVMGEDDSLYGLLVELD 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVG-----------LKTGDQKEIERFFPED 229
+ E+ +K ++ + K + +
Sbjct: 174 EEGNPKENGLRKENCLLLPKSFKDEAEKAKFKDVALHSVVRFNPYKADGETDAITSNLLG 233
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF-ESESAMRGLCSQKIKQHSEFL 288
+++ K NF ++++ + + +L + E+ ++ + E
Sbjct: 234 IKPEEVEDHKGDFNFEVEKINHFVEAELGEELYKKAFGEETTIKDEAAYRAELAKRREME 293
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
+ + ++ + E +EE +
Sbjct: 294 YASGSNNLFANKLIEYVKANIGTPEFDKETFRPFVANIQ------------KKNNEELTE 341
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQS----ALYQQLGRFPGH------EKKM 398
V L + + +EVT+E ++ + QQ+ + + +
Sbjct: 342 ESFQSIIDYVFFTTALRQMAKAQGVEVTDEIIRQEALGEIRQQMAAYGYSSLPDSIFETL 401
Query: 399 LDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDK 456
+ + N AE V V + ++VT ++ +S E +
Sbjct: 402 VKSHLEDENKRAETELNATIRLVALDAQSKVTLEKKEVTSEEFEKLFHGTSEEPAEEA 459
>gi|254797096|ref|YP_003081934.1| putative trigger factor [Neorickettsia risticii str. Illinois]
gi|254590290|gb|ACT69652.1| putative trigger factor [Neorickettsia risticii str. Illinois]
Length = 433
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 84/450 (18%), Positives = 169/450 (37%), Gaps = 26/450 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + E S GLKR+ +V +P++ + F E +ED K +GFR GK P +
Sbjct: 1 MLLKEVCSHGLKRKYEVEVPASAIDAGFKEAVEDRIKKNVYRGFRKGKTPFDVAAKQ-EE 59
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ I + + ++ E + E +K + ++
Sbjct: 60 GLIDSVIVDQVYRHWYDVKQSEKLVLFNNHE----EIIGIDATAYKESKAAVKFTVECEL 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
LPQI F + V EV ++++++ ++ + V + + E GD+V VD
Sbjct: 116 LPQIPKIDFSQVSVKTKAFEVSKEDVEKYKQKVKEQLVDWVDLTQSDSIERGDRVVVDLR 175
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V + N + VG + + ++ ++G+K G+++ I FPED+ +AGK
Sbjct: 176 GKVGDEAFRGGQLDNFECQVGDGKVIASLSDGIIGMKVGEERFIPVLFPEDYHDIAVAGK 235
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+K V ++ L +++ + + + ++RQI
Sbjct: 236 NAVFRTLVKSGKRSQKVSDPEAALLKWLSCKTDDEANEKVKMLVTSECSKRINELLRRQI 295
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ KY F VPESL+E + + + A RR
Sbjct: 296 -EAQLEKYDFQVPESLLERQERYV-----------------KVDLPSISADDLKKEAMRR 337
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
++L + NI + + ++ L + + ++ + + +
Sbjct: 338 TRLSLILAEFAAERNISIDKTDVARHLLNVSMAAGLDSSYLAEIYRNNKDFAGSVTLKLM 397
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
E K+ +L++VQ T D++ + E
Sbjct: 398 ESKIFAVLLETVQKEAETSTVDEILSFTEE 427
>gi|330722308|gb|EGH00175.1| Cell division trigger factor [gamma proteobacterium IMCC2047]
Length = 332
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 61/323 (18%), Positives = 151/323 (46%), Gaps = 7/323 (2%)
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P++E + ++V + ++++ +I+ Q+ ++ + + + ++ GD+V + +
Sbjct: 1 MPEVEFTDLSKIEVEKVTAKIEDADIESQIEQLREQQQEMKATKRAAKEGDQVVIAFEGK 60
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD E S ++GS + + L+G+K G+++ ++ FPE + ++LAGK V
Sbjct: 61 VDGEAFEGGSSDETPLVLGSNTMIPGFEDGLLGIKPGEERVLDLEFPESYHAEELAGKAV 120
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE-SESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ K+ F P+P +N + + G E E R + ++ E + K+K ++D
Sbjct: 121 QFTVKAKKSFKPVPAELNEEFFAKYGIEGGEEEFRTKLRESMEAALESALNNKLKSNLID 180
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + VP +LV+ E + I ++ + Q ++ + A +RV
Sbjct: 181 KLRGAHEIAVPSALVDQEIDQIRNEMVQQFGGGQQIDPSM-----FPADMFKDRAVQRVA 235
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+G+++ N + ++E++++A+ + ++++H L ++ E+
Sbjct: 236 SGLLINQYVRDNQLSASDEQVRAAIENFASTY-EDSDQVIEHVYANEQQLQHFKSVAVEE 294
Query: 420 KVIDHILKSVQIVDRKVTFDQLF 442
+VI +L+ VQ+ + + +
Sbjct: 295 QVIAGLLEKVQVKEVAGNYQDVM 317
>gi|322629164|gb|EFY25943.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322682023|gb|EFY78048.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322685148|gb|EFY81145.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323223060|gb|EGA07403.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323244082|gb|EGA28091.1| trigger factor [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
Length = 116
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 43/84 (51%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + ++GL R + + I ++ + + + ++ K I GFR GKVP++ + YG
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDE 84
S+ + + +++ + + K
Sbjct: 61 SVRQDVLGDLMSRNFVDAIIKEKL 84
>gi|330723690|gb|AEC46060.1| trigger factor [Mycoplasma hyorhinis MCLD]
Length = 487
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 72/442 (16%), Positives = 165/442 (37%), Gaps = 19/442 (4%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
E +E + ++ + + + I GFR G VP K ++
Sbjct: 5 ELLTESSELKITLQPEEALWKKMQAKAEAKLTKNLKIDGFRKGSVPPKLAKKHISEA--- 61
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
I++E V I + + +A N + I L++ Y + P +
Sbjct: 62 ----SILREAVSLITPELETQARQNVMADDNVLDGPIYKIEDISQTKLEISFLYPVYPTL 117
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNV 184
+ + +L+ +V ++++D+Q+ ++ ++ AF+ + + D V ++ +D
Sbjct: 118 NLPDYKNLKTKFVEPKVSKEDVDKQVQKLLESGAAFQESKQPVKNSDIVNFNFKGFIDGN 177
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
E + +GS + + E LVG+K G++KEI FPE++ + AGK+ +
Sbjct: 178 AFEGGEADHFDLKIGSGNFIAGFEEQLVGMKKGEKKEIFVTFPENYHVTAYAGKEAKFKI 237
Query: 245 SIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
I ++ + ++ + + ++E +R S+ R +R+ I
Sbjct: 238 KINKITELILPKLDEEFVKKLALEDVKTEKDLREYLSKLTFNEKLEQNRVAFQREAFAEI 297
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKRR 357
+ + E L+ NE + + + S + +E+ +
Sbjct: 298 QKQVQIPISEKLLLNEMKRLEKLFESNLKSQGFTLKEYLEITKFTEEDIKLQMRTESINL 357
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + I + I E+ + + + +++ F L +L+ I
Sbjct: 358 LKNAFIYAEISKLEQIFARPEDYEFEYGKLAKFYKKPVEEVKKTFP-----LTQLQVNIT 412
Query: 418 EDKVIDHILKSVQIVDRKVTFD 439
KV+D +++ KV+ +
Sbjct: 413 NSKVLDKLIEYNSDKKSKVSSE 434
>gi|311746207|ref|ZP_07719992.1| trigger factor [Algoriphagus sp. PR1]
gi|126576435|gb|EAZ80713.1| trigger factor [Algoriphagus sp. PR1]
Length = 441
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 59/459 (12%), Positives = 159/459 (34%), Gaps = 30/459 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ + + + + + +++D KANIKGFRPGK P+S +K++YG
Sbjct: 1 MEISLDKQSANQASIKIKLNEADYQPKVDAKLKDYAKKANIKGFRPGKAPVSMVKNIYGT 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S+L E I+ I+ E + L ++ + P + + + +
Sbjct: 61 SVLVEEINSILSESLNNYLKEQTFKVLGEPL-----PVENNETIEWKTQKEFDFEYKIGF 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+ ++++ + T+ +VD+K ++ + + + E D +
Sbjct: 116 VEEVKVPLDKKFKGTKYSIKVDDKLVEETIENLKSQSGNSTNPEVSEAGDHIY-GDLVAT 174
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + + + +V + D K+ + + ++ K
Sbjct: 175 DSGFSKTLSLDLSKITKKLAGKFTGISKDAVVEFDSKDIKKAQWEEALGMTEEEAESAKG 234
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ F++K + +N D ++ KVK +
Sbjct: 235 PITFTVKNINRTEEAEMNQDFFDKVFGPGVVTTEEEF------------IAKVKETLQGN 282
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ E L + + E N + E+++ + +++
Sbjct: 283 YDKESKAFTDEELKKELTAAAKVDLPEEFLKEWLIRANEGKVSSEEVEKEFPMYAKQLTW 342
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLG----------RFPGHEKKMLDHFQKYPNALA 410
++ + +N I+ E++ + + + + +D++ K +
Sbjct: 343 SLISNQLATENKIQAEHEDVIAKTKEMIKEQFASSGLGSQMEDSMDMFVDNYLKGEDGQN 402
Query: 411 ELRA--PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ + DKV+ ++ ++V + ++++T D+ + +
Sbjct: 403 YMNMLTSVQNDKVLAYVQETVDLKEKEITIDEFKELLEK 441
>gi|304373390|ref|YP_003856599.1| Trigger factor [Mycoplasma hyorhinis HUB-1]
gi|304309581|gb|ADM22061.1| Trigger factor [Mycoplasma hyorhinis HUB-1]
Length = 487
Score = 117 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 72/442 (16%), Positives = 165/442 (37%), Gaps = 19/442 (4%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILS 64
E +E + ++ + + + I GFR G VP K ++
Sbjct: 5 ELLTESSELKITLQPEEALWKKMQAKAEAKLTKNLKIDGFRKGSVPPKLAKKHISEA--- 61
Query: 65 ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
I++E V I + + +A N + I L++ Y + P +
Sbjct: 62 ----SILREAVSLITPELETQARQNVMADDNVLDGPIYKIEDISQTKLEISFLYPVYPTL 117
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNV 184
+ + +L+ +V ++++D+Q+ ++ ++ AF+ + + D V ++ +D
Sbjct: 118 NLPDYKNLKTKFVEPKVSKEDVDKQVQKLLESGAAFQESKQPVKNSDIVNFNFKGFIDGN 177
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
E + +GS + + E LVG+K G++KEI FPE++ + AGK+ +
Sbjct: 178 AFEGGEADHFDLKIGSGNFIAGFEEQLVGMKKGEKKEIFVTFPENYHVTAYAGKEAKFKI 237
Query: 245 SIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
I ++ + ++ + + ++E +R S+ R +R+ I
Sbjct: 238 KINKITELILPKLDEEFVKKLALEDVKTEKDLREYLSKLTFNEKLEQNRVAFQREAFAEI 297
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKRR 357
+ + E L+ NE + + + S + +E+ +
Sbjct: 298 QKQVQIPISEKLLLNEMKRLEKLFESNLKSQGFTLKEYLEITKFTEEDIKLQMRTESINL 357
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + I + I E+ + + + +++ F L +L+ I
Sbjct: 358 LKNAFIYAEISKLEQIFAKPEDYEFEYGKLAKFYKKPVEEVKKTFP-----LTQLQVNIT 412
Query: 418 EDKVIDHILKSVQIVDRKVTFD 439
KV+D +++ KV+ +
Sbjct: 413 NSKVLDKLIEYNSDKKSKVSSE 434
>gi|153826395|ref|ZP_01979062.1| trigger factor [Vibrio cholerae MZO-2]
gi|149739873|gb|EDM54064.1| trigger factor [Vibrio cholerae MZO-2]
Length = 245
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 43/252 (17%), Positives = 121/252 (48%), Gaps = 9/252 (3%)
Query: 198 VGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVV 257
+G+ + + +VG G + I+ FPED+ ++L GK + + +V + +
Sbjct: 1 MGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAAKFAIKVNKVEARELPEL 60
Query: 258 NNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVE 315
N++ R G A++ + +++ + ++ ++K Q ++ + + VP +L++
Sbjct: 61 NDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAIEGLVKENEIQVPSALID 120
Query: 316 NEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEV 375
E N + Q+ NV++ + + + AKRRV+ G++LG + + ++
Sbjct: 121 QEINVLRQQAAQRFGG------NVEAAAQLPRELFEEQAKRRVVVGLLLGEVIRTHELKA 174
Query: 376 TEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRK 435
EE++++ + + + +++ ++++ + +R E++ +D I+ ++ ++
Sbjct: 175 DEEKVKALITEMATAY-EDPSEVVSYYEQNQQLMNNMRNVALEEQAVDAIIAKAKVTEKA 233
Query: 436 VTFDQLFDNSSE 447
++F +L + +
Sbjct: 234 ISFSELMNPVAA 245
>gi|56807886|ref|ZP_00365717.1| COG0544: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger
factor) [Streptococcus pyogenes M49 591]
Length = 211
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 87/217 (40%), Gaps = 11/217 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I +++ + ++ I+ N GFR G +P +G+
Sbjct: 1 MSTSFENKATNRGVITFTISQDKIKPALDKAFNKIKKDLNAPGFRKGHMPRPVFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L E ++ ++ E +++ +P I + E + L
Sbjct: 61 EVLYEDALNIVLPEAYEAAVTELGLDVVAQPKIDVVSM---------EKGKEWTLSAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + +L V D EV ++++D ++ +N +K+ E+ GD V +D+
Sbjct: 112 TKPEVKLGDYKNLVVEVDASKEVSDEDVDAKIERERQNLAELIIKDGEAAQGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLK 215
SVD V + N +GS + LVG K
Sbjct: 172 GSVDGVEFDGGKGDNFSLELGSGQFIPGFEDQLVGAK 208
>gi|297792999|ref|XP_002864384.1| trigger factor type chaperone family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310219|gb|EFH40643.1| trigger factor type chaperone family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 551
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 75/456 (16%), Positives = 166/456 (36%), Gaps = 34/456 (7%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPG-KVPLSHIKSLYGK 60
+V E +L V +P+ D + + + + + GFRP +VP + I G+
Sbjct: 99 KVTETVQANSSVKLSVEVPAIVCEDCYQRVLTEFMKLSKVPGFRPKTRVPENIIVGFVGR 158
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L T++ I+K +P + R A++ SI I D+ L + D
Sbjct: 159 QYVLRATVESILKRTLPHAMESVTGR-ALKDSIQIVSSFPDMEKA-YSKLKTLSYEVVVD 216
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
++P++ + D + + + E+ ++ ++ E + + + V
Sbjct: 217 VVPELRWNPEDGYKNMKVVVELGDEIDAKKACERQLRQKYKSLGALKIVTDRGLQVGDLA 276
Query: 180 SVD------------NVILEDQSKKNVQFIVGSADLF-SETTEILVGLKTGDQKEIERFF 226
VD + D K F + + ++G++ G+ K F
Sbjct: 277 VVDISATTIDEDGSTGQAIPDAESKGFHFDTEEGNRILPGFLDSIIGIRAGESKSFTLVF 336
Query: 227 PEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQH 284
PE + L G++ + KE+F +++ LA + G + + +++ ++
Sbjct: 337 PESWKQESLRGQRAQFTVDCKELFYRDLPTLDDSLADKLLPGCTTLKEVEETLAKRCQEM 396
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----- 339
+ Q ILD I ++P+SL E + E+ ++
Sbjct: 397 EQEAKEQATDNAILDQIRKMVEVEIPQSLFEEQGRQFYGARLLEIQASGNMKLTEDQLAS 456
Query: 340 ---DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEK 396
E L+ + + +G I ++ N+E + +E+ + + F H++
Sbjct: 457 LSSQKAVNEFLETQRESITNIIKQNLAVGDIFKRENLEFSTDELVKEVENSISEFKKHKQ 516
Query: 397 KMLDHFQKYPNALAELRAPIFED-KVIDHILKSVQI 431
+ + + I E KV++ + +I
Sbjct: 517 EY------DEERVKDQVQEILEGAKVLEWLKDRAEI 546
>gi|330683905|gb|EGG95675.1| bacterial trigger factor protein [Staphylococcus epidermidis
VCU121]
Length = 161
Score = 117 bits (291), Expect = 5e-24, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 74/166 (44%), Gaps = 10/166 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M + EG + L V +PS ++ + ++ + + + N+ GFR GKVP + +G
Sbjct: 1 MTATWEKKEGNEGLLTVTVPSEKVDKALDQAFKKVVKQINVPGFRKGKVPRPIFEQRFGV 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ + +D ++ E E + + +P + + + IE D +
Sbjct: 61 EALYQDAVDILLPEAYGEAIDETGINPVAQPEVNVTQ---------IEKGKDFIFEATVT 111
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKET 165
+ P++++ + L++ + E+ ++E++ + + VK+
Sbjct: 112 VEPEVKLGDYKGLEIEKQDSELTDEELEESINHSLGHMAEMVVKKE 157
>gi|312131370|ref|YP_003998710.1| trigger factor [Leadbetterella byssophila DSM 17132]
gi|311907916|gb|ADQ18357.1| trigger factor [Leadbetterella byssophila DSM 17132]
Length = 447
Score = 117 bits (291), Expect = 6e-24, Method: Composition-based stats.
Identities = 66/461 (14%), Positives = 149/461 (32%), Gaps = 30/461 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ L V + S ++I + A +KGFRPG VP+ +IK+LYGK
Sbjct: 1 MQTKFDKVSSTLGNLKVEVSEADYKPSVEKKIREYAKTAQVKGFRPGHVPIPYIKNLYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SIL + + I + V ++ + P T + + D D +
Sbjct: 61 SILVDEVIRIASDAVNNVIKEEKLNIVGEPKPTEDSFQIDWHKQ-----KDFTFEYTLGF 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV-AFEVKETESEIGDKVTVDYTV 179
+ +TQ E E+++ + ++ K E + + +
Sbjct: 116 ASAFTVDVNSIPAITQYEIEPSEEQVQNSIEDLKKRFGVDKEPEVSAEGDIIFGKLSQES 175
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + K + I +++ + E F S ++ +
Sbjct: 176 TEFFFQSGIPTDKVKADAKAQFIGLKKEDTIKFDIQSIFETARELGFATGKSDEEAEQLQ 235
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
F ++ + P +N + ++ ++ ++++ ++
Sbjct: 236 GEFTFVVERISRVEPAELNQEFFDKVLGADKAKDEKEFVEQVRAIISENYNRESDFLFDF 295
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ V L E L +V EDL+ R +
Sbjct: 296 EVEKALLDSVTIELPEEFLKEYLLEVNQ------------GKATAEDLEREFPAILRGIK 343
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHE------KKMLDHFQK------YPN 407
+ + + + I+V ++ + ++ + G + ++ +D+ K
Sbjct: 344 LDFIRAEVAKDHEIKVEYNDVVEEVKSEIRGYFGGQAGFDGMEEFIDNMAKKQLDGTNKE 403
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
+ F KV++ + + VQ V+ ++ + +S S
Sbjct: 404 NTRKYFERAFGRKVLNFLKEKVQRNKESVSVEKFNELASAS 444
>gi|295107593|emb|CBL05136.1| trigger factor [Gordonibacter pamelaeae 7-10-1-b]
Length = 437
Score = 117 bits (291), Expect = 6e-24, Method: Composition-based stats.
Identities = 61/443 (13%), Positives = 162/443 (36%), Gaps = 24/443 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGK---VPLSHIKSL 57
M+V +K + + +D + + ++++ N + G RP K V + + +
Sbjct: 1 MKVTQKKLDDGRLLIDAVASTAEVSNALNNAHLAFAQQM---GMRPEKDKTVAQAAEERM 57
Query: 58 YGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
K + S +++ ++ +VP + K A P ++ + L
Sbjct: 58 GIKDLDSVVMNQAVEALVPFAIDKVGVIPAFPPQPEPKT--------ALKRGQTFQFGLH 109
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDKVTVD 176
P E++S++ + +T +DE+++D Q+ ++A+ F GD +
Sbjct: 110 LTPKPDYELTSYEPVSITIQEVSIDERQVDEQINQVAERYAEFVADDPHPVRKGDSCLLA 169
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ L + + G+ + E ++G+ G+ K P +
Sbjct: 170 MESYENGEKLPGLTTDARTYSAGAGLMPDGFDENIIGMDVGETKTFTFEGPGIDDEGNEI 229
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
+ + ++KE+ + V+++ + ++ +AMR + + + +
Sbjct: 230 VETIECTVTVKEIQKKVAPVIDDAWVAKFMPMYKDVAAMRDDIRRGLNRQLSGEYENYKR 289
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI---DEEDLQYYH 351
++ ++ + + + E+ ++ +R E+ N +++
Sbjct: 290 NMAAGELAKRFKGSIADEVYESMSRNLMNNMRAEVEQQNMTWDQFVEQQGGEQQFNMMMM 349
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
M ++ ++ G L + + V++E++Q A P + + + ++ A
Sbjct: 350 MQTRQMLVQGYALDALFRHEGLVVSDEDVQEAC---AAMNPQNPQGVRRQMEESGRGFA- 405
Query: 412 LRAPIFEDKVIDHILKSVQIVDR 434
LR K +L+ I +
Sbjct: 406 LREAAERIKANKWLLEHADITVK 428
>gi|150026124|ref|YP_001296950.1| trigger factor (TF) [Flavobacterium psychrophilum JIP02/86]
gi|149772665|emb|CAL44148.1| Trigger factor (TF) [Flavobacterium psychrophilum JIP02/86]
Length = 441
Score = 116 bits (290), Expect = 7e-24, Method: Composition-based stats.
Identities = 66/455 (14%), Positives = 158/455 (34%), Gaps = 31/455 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +++ + +RI + A +KGFR G VP ++ YGK
Sbjct: 1 MDIRRIAISPVMEIIEITVMPTDYKGQVAKRINEKMPLATVKGFRKGAVPKDLVEKQYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I E + +++ + ++ P E + L + +
Sbjct: 61 AIKQEEVKKVVDLALERFITAERLALLGTPLAIEKEIFN-------WEVEALTFQYEVGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P + V + + D+K ID Q+ I K +E SE +
Sbjct: 114 APFFTLDLDAKTNVVKYVVTADDKLIDGQVTRIQKQFGKAIPQEIVSEKTEISGTFTNQE 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLF--SETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
S + + + V K Q + + S D+ G
Sbjct: 174 AGINNPITISLDIFKDKETAQKFIGKKSGDIVTVNTKGLFQDDHQLMDYLKVSHDDVHGL 233
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+V +NF+I+ + P +N +L +L E A KIK+ +E
Sbjct: 234 EVEVNFTIENINETEPAELNQELFDKLFGEGNVATLEELKAKIKEDAES----------- 282
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + + + +V + E ++ ++ + + ++ +++ +
Sbjct: 283 -QFAEQAEQKLTDDVVNALIENTKFDLPKEFLIKWLQTAGEKNLSPAEAEIEYIRSEKGL 341
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSA----LYQQLGRFP------GHEKKMLDHFQKYPNA 408
++ G +++I++ E++++ + QQ+ +F + ++
Sbjct: 342 RFQMIEGRALAQSDIKINFEDLKTFTSKSIRQQMAQFGQTNPTDQEVEGIVARVLSNQEE 401
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ L + +DK++ +++ ++VT++Q
Sbjct: 402 VKRLSEQVTKDKLLQMLVEKANPTTKEVTYEQFVA 436
>gi|300776305|ref|ZP_07086163.1| trigger factor [Chryseobacterium gleum ATCC 35910]
gi|300501815|gb|EFK32955.1| trigger factor [Chryseobacterium gleum ATCC 35910]
Length = 444
Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats.
Identities = 59/460 (12%), Positives = 156/460 (33%), Gaps = 29/460 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + + + L V + + + +++ + A + GFR GKVPLS +K Y
Sbjct: 1 MKVTAQNHDDVSALLTVTLEKSDYKEKVEKQLINYAKNAQVPGFRKGKVPLSMVKKQYEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPS---ITINEGESDITSGLIEGTVDLKLRLS 117
I E I+ + + + +++ R +P + + +D E + + +
Sbjct: 61 GIAFEEINRQVSDALNNYVNENKLRLVGQPIPQPVNEFDYNADQLEVAFEVGFEPEFTID 120
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+ E +K Q+ + ++ E + + ++
Sbjct: 121 LAKYEAPHYKVEASDKEIGKSIENMQKRFAEQVPQDKITKDSYIALEVSQVVEEDAEGEH 180
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
N+ + ++K+ + + G S + + F E+
Sbjct: 181 HHHPKNLTITAENKEAFKLVKGLKMDGSVKVTKETLAGDEELAKELGFSKEEVEHLHHNE 240
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+V++ + L + + + +SE ++ ++ ++ + ++
Sbjct: 241 VEVKVKDFYSLNLAELNQDLFDKVYGEGNIKSEEELKEKVKAELDEYFQQNADVHFVNKV 300
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
L+ ++ K +PES + Q ++ E + K +
Sbjct: 301 LEQVTEKEEVKLPESFLVKWLLFSNQNIQSEEQAKEILEAE----------------KNQ 344
Query: 358 VLTGIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFP------GHEKKMLDHFQKYPN 407
+ I+ G + +N I + ++ + + QL + +K K
Sbjct: 345 LKYQIIEGKLMTENEINLDYADVLAQAEQLVKNQLAIYGIHHLGDEEIQKYAVEMLKDQE 404
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+ ++ + + K+ D IL+ + K++ D+ + +
Sbjct: 405 QVRQISSEVAMAKLKDVILEKASKKETKISHDEFLEELKK 444
>gi|22327852|ref|NP_200333.2| trigger factor type chaperone family protein [Arabidopsis thaliana]
gi|18650596|gb|AAL75898.1| AT5g55220/MCO15_17 [Arabidopsis thaliana]
gi|25141197|gb|AAN73293.1| At5g55220/MCO15_17 [Arabidopsis thaliana]
gi|332009218|gb|AED96601.1| trigger factor type chaperone family protein [Arabidopsis thaliana]
Length = 547
Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats.
Identities = 77/454 (16%), Positives = 170/454 (37%), Gaps = 32/454 (7%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPG-KVPLSHIKSLYGK 60
+V E +L V +P D + + + + + GFRP +VP + I G+
Sbjct: 97 KVTETVQANSSVKLSVEVPEIVCEDCYQRVLTEFMKLSKVPGFRPKTRVPENIIVGFVGR 156
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L T++ I+K +P + R A++ SI I D+ L + D
Sbjct: 157 QYVLRATVESILKRTLPHAMESVTGR-ALKDSIQIVSSFPDMEKA-YSKLKTLSYEVVVD 214
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV-------------AFEVKETE 166
++P+++ + D + + + E+ ++ ++ E +V +
Sbjct: 215 VVPELKWNPEDGYKNMKVVVELGDEIDAKKACERQLRQKYKSLGALKIVTERGLQVGDLA 274
Query: 167 SEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFF 226
T+D S I + +SK L + ++G++ G+ K F
Sbjct: 275 VVDISATTIDEDGSTGQAIPDAESKGFHFDTEEGNRLLPGFLDAIIGIRAGESKSFTLVF 334
Query: 227 PEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQH 284
PE + L G++ + KE+F +++ LA + G + + +++ ++
Sbjct: 335 PESWKQESLRGQRAQFTVDCKELFYRDLPTLDDSLADKLLPGCTTLKEVEETLAKRCQEM 394
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----- 339
+ Q IL+ I ++P+SL E + E+ + +++
Sbjct: 395 EQEAKEQATDNAILEQIRKMVEVEIPQSLFEEQGRQFYGARLLEIQGNMKLNEDQLASLS 454
Query: 340 -DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKM 398
E L+ + I +G I ++ N+E + +E+ + + F H+++
Sbjct: 455 SQKAVNEFLETQRESITNIIKQNIAVGDIFKRENLEFSTDELVKEVENSISEFKKHKQEF 514
Query: 399 LDHFQKYPNALAELRAPIFED-KVIDHILKSVQI 431
+ + I E KV++ + +I
Sbjct: 515 ------DEERVKDQVQEILEGAKVLEWLKDRAEI 542
>gi|32490905|ref|NP_871159.1| hypothetical protein WGLp156 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166111|dbj|BAC24302.1| tig [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 435
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 86/450 (19%), Positives = 176/450 (39%), Gaps = 22/450 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQ+ E LK+E+ +II + +++++ ++ K I GFR GKVP +K+ Y
Sbjct: 1 MQIQE--ISNLKKEIKIIISYYEVELEVDKKLKIMQKKICINGFRKGKVPKLILKNKYEA 58
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I +TI E++K+ E + + + + + + L + +
Sbjct: 59 HIYEDTIKELMKKKFSEYILNKKIIILGEINYKVK---------IDNKNKNYNLYIKFSY 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+++ ++ D + + Q I +++ ++ID + I + N + + ++ ++VT+
Sbjct: 110 YNKLKFNNLDKIIIKQPILKIENEDIDFFINTIIEENCDWNISDSSILKQNRVTISIEEI 169
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N ++ N+ FI G + + + L+ K+G+ + F + +I +
Sbjct: 170 CKNKK-PNKVISNLIFITGKNIICNYIEDNLLDKKSGEYIILPLFLNKQKNIVKYNKLSL 228
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
IK+V + N+ ++G E S + L + I SE+L + +K QI
Sbjct: 229 NYIIKIKKVEKKVLHNFNSKFFKKIGIEGISSYEEFKILIKKNIFIQSEYLSKMYIKNQI 288
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ ++P L ENE L + K + + K R
Sbjct: 289 VKKFFLYNKINIPSILFENEIKNFLSTNLNCNLNDFSKINVLSLLHSSIKNKLINKTKHR 348
Query: 358 VLTG-IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ G L KNNI + L ++ KK ++ N ++
Sbjct: 349 MFFGEFFLHKKIRKNNIN------EKYLVEKTLEENKIPKKFWKKYKNNKNFTKKIINSN 402
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
E+ +I +IL ++K+ L N
Sbjct: 403 LENNIIKYILSKSVNKEKKINLKNLIKNLE 432
>gi|148887039|sp|Q4AAI5|TIG_MYCHJ RecName: Full=Trigger factor; Short=TF
gi|144227488|gb|AAZ44236.2| trigger factor [Mycoplasma hyopneumoniae J]
Length = 465
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 74/471 (15%), Positives = 184/471 (39%), Gaps = 22/471 (4%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETID 68
E + ++ + S + + + + + +K +++GFR GKVPL ++ + E
Sbjct: 9 ESAELKIKLTADSKKWAEFYQKAEQKQAAKVSLRGFRKGKVPLEKARAYLNPQAVFEL-- 66
Query: 69 EIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISS 128
+ L + +++AA + N ES I + + +L++ Y + P+I++
Sbjct: 67 -----ALRMFLPELEKQAATNIIDSDNVIESPIFNIVNMDKNNLEIEFLYPVYPEIKLPD 121
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILED 188
+ +L+ I ++ +++I+ Q ++ + F +IGD + ++ +D+ +
Sbjct: 122 YKNLKTKFAIKKITKEDIELQKQKLLEAKGRFIEVNRPVKIGDVINFNFKGFIDDEPFDG 181
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKE 248
+N +GS + E LVGL+ + +I FPE++ + A KK R I +
Sbjct: 182 GEGENFDLRIGSNSFIAGFEEQLVGLEIKKEADIYVTFPENYQVHTYANKKARFRVRINK 241
Query: 249 VFSPLPVVVNNDLA---VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
+ P + N+ E+ S + ++ + + +R L I +
Sbjct: 242 IKENQPAKLTNEFVASLKIQNVETISQLEVYLENLTERENIERAKIDFQRNALTEIGEQV 301
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKRRVLTG 361
+ + L+ E + + + + +++ + + AK+ +
Sbjct: 302 EVPLAKKLINLEIERLNEVFHSTLKQQEIPLKEYLKITKFTEKDIYDQFEVEAKKLLKNS 361
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ I + + T++E +S + + +++ + + I KV
Sbjct: 362 FIFAEIAKLEGLVPTQQEYESHVEKLAKFTGKSVQEISETVSYNEIQIN-----ITNQKV 416
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEI 472
ID +++ + + N +++ E+ ++ E +E E
Sbjct: 417 IDKLIE---FNHEAKDEEIVNKNQNDNEIEQDKEQKDNNEEKIKQENNLEN 464
>gi|71893501|ref|YP_278947.1| trigger factor [Mycoplasma hyopneumoniae J]
Length = 459
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 74/471 (15%), Positives = 184/471 (39%), Gaps = 22/471 (4%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETID 68
E + ++ + S + + + + + +K +++GFR GKVPL ++ + E
Sbjct: 3 ESAELKIKLTADSKKWAEFYQKAEQKQAAKVSLRGFRKGKVPLEKARAYLNPQAVFEL-- 60
Query: 69 EIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISS 128
+ L + +++AA + N ES I + + +L++ Y + P+I++
Sbjct: 61 -----ALRMFLPELEKQAATNIIDSDNVIESPIFNIVNMDKNNLEIEFLYPVYPEIKLPD 115
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILED 188
+ +L+ I ++ +++I+ Q ++ + F +IGD + ++ +D+ +
Sbjct: 116 YKNLKTKFAIKKITKEDIELQKQKLLEAKGRFIEVNRPVKIGDVINFNFKGFIDDEPFDG 175
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKE 248
+N +GS + E LVGL+ + +I FPE++ + A KK R I +
Sbjct: 176 GEGENFDLRIGSNSFIAGFEEQLVGLEIKKEADIYVTFPENYQVHTYANKKARFRVRINK 235
Query: 249 VFSPLPVVVNNDLA---VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
+ P + N+ E+ S + ++ + + +R L I +
Sbjct: 236 IKENQPAKLTNEFVASLKIQNVETISQLEVYLENLTERENIERAKIDFQRNALTEIGEQV 295
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKRRVLTG 361
+ + L+ E + + + + +++ + + AK+ +
Sbjct: 296 EVPLAKKLINLEIERLNEVFHSTLKQQEIPLKEYLKITKFTEKDIYDQFEVEAKKLLKNS 355
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ I + + T++E +S + + +++ + + I KV
Sbjct: 356 FIFAEIAKLEGLVPTQQEYESHVEKLAKFTGKSVQEISETVSYNEIQIN-----ITNQKV 410
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEI 472
ID +++ + + N +++ E+ ++ E +E E
Sbjct: 411 IDKLIE---FNHEAKDEEIVNKNQNDNEIEQDKEQKDNNEEKIKQENNLEN 458
>gi|313206094|ref|YP_004045271.1| trigger factor [Riemerella anatipestifer DSM 15868]
gi|312445410|gb|ADQ81765.1| trigger factor [Riemerella anatipestifer DSM 15868]
gi|315023724|gb|EFT36727.1| Cell division trigger factor [Riemerella anatipestifer RA-YM]
gi|325336462|gb|ADZ12736.1| trigger factor [Riemerella anatipestifer RA-GD]
Length = 444
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 72/454 (15%), Positives = 151/454 (33%), Gaps = 23/454 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + + L V + D +++ + A I GFR GK PL IK Y
Sbjct: 1 MKVTSKNHDEVSALLTVTLDKKDYKDKVEKQLINYAKNATIPGFRKGKAPLGMIKRQYEA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E I++ + E + +S+ R +P + + E D +E + ++ S++I
Sbjct: 61 GLTYEEINKQVSEGLNNYISENKLRLLGQP-VPVPVEELDTNQEQLELSFEVGFEPSFNI 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+ E +KE+ + + + K E +E ++ V
Sbjct: 120 -------DLAKYEAPHYKIEASDKEVGQSIENMQKRFAEREAQEKVTKDSYISLEVSQVV 172
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ E I E + K + ++ E +DLA
Sbjct: 173 EEDAEGEHNHAPKHVVINAENKAAFELVK-----KLKKDESVKVSKEELTKDEDLAKFLG 227
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ + V D+ E + K SE ++ KVK ++ +Y
Sbjct: 228 FAKEEAEHLHHNEVEVTVKDIYKLNLAELNQELFDSVYGKDTVKSEEELKAKVKSELDEY 287
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
++E K+ N + EE + K ++
Sbjct: 288 FQQNADVHFVNKVLEQITEKEEVKLPEAFLIKWLMFSNPNIATEEQAKEIFEAEKNQIKY 347
Query: 361 GIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFP------GHEKKMLDHFQKYPNALA 410
++ G + N++++ ++ + + QL + +K K +
Sbjct: 348 QVIEGKLMSDNDVKIDYADVLAQAEQLVRNQLAIYGIHHLSDEEIQKYAVEMLKNQEQVR 407
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDN 444
++ + + K+ D IL+ + K++ D
Sbjct: 408 QISSEVAMTKLKDVILEKASKKESKISHDDFLKE 441
>gi|295103191|emb|CBL00735.1| trigger factor [Faecalibacterium prausnitzii SL3/3]
Length = 324
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/326 (17%), Positives = 131/326 (40%), Gaps = 12/326 (3%)
Query: 117 SYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD 176
+ + +P + + L T+ + V EK ++ + +A+ + F + G +VT+D
Sbjct: 4 TANTMPAAALGQYKGLAFTRRVRPVSEKAVEADIGNLARVHAPFVPVSAPAARGMRVTLD 63
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ + + D + V ++G+ L E + G G+ + +P D + +L+
Sbjct: 64 FEGFLAGAPIPDSRMEKVTVVLGTGQLMPAAEEAVYGHCAGETFRFDFTYPADFRVPELS 123
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
GK + + V V++ LA LGF A+R +K + E +
Sbjct: 124 GKTAQFEICLHTVERKQVPPVDDALAKSLGFADLEALRESLREKKRLSHEANADRIAGAA 183
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ----NVDSIDEEDLQYYHM 352
+LD T ++P L+ + ++R + + + + E+ + Y
Sbjct: 184 LLDMAGANLTVELPAELLAQNAEYQMNQLRQRLRKSQMTMELYCKSAGLTPEQVREGYRK 243
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+R++ + + I E I VT++E+ + + + E+++ + +
Sbjct: 244 EAERQLRAMLAVRAIAEAEKITVTQQEVDAEIARLSKLHDTPEEEIRKVLSRD-----AI 298
Query: 413 RAPIFEDKVIDHILKSV---QIVDRK 435
A + KV +L + +V+++
Sbjct: 299 AAAVTNQKVQRFLLDNAALTSVVEKE 324
>gi|303281802|ref|XP_003060193.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458848|gb|EEH56145.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 530
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 74/466 (15%), Positives = 164/466 (35%), Gaps = 45/466 (9%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGF--------RPGKV----P 50
V + K L+V +P+ T++ +E K I GF R P
Sbjct: 66 VKQTDLGDCKVRLEVTVPTAVQTEARQNCLEGFAEKTQIPGFAQYKKSGGRKKGANVLPP 125
Query: 51 LSHI-----KSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGL 105
I + +G + E + + + + E++S + + + + ++ +
Sbjct: 126 AGVIVNFVGEKEFGAACAEEMLQLSLPKAM-EVVSATALQDSEKIETSFDDLLKAFSGKE 184
Query: 106 IEGTVDLKLRLSYDILPQIEIS-SFDDLQVTQDICEVDEKEIDRQMAEI------AKNNV 158
E T D+ ++ +++P I+ + + L VT DE + A
Sbjct: 185 CEPTGDVIYSVTVEVVPTIKWTGDYRKLSVTVTSPGDDETDALEAEAIFNTRLRGLGTMR 244
Query: 159 AFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSAD-LFSETTEILVGLKTG 217
+ E + ++ + ++ +K G+A + ++G+K G
Sbjct: 245 VVVDRGLEIGDQAVMDLEAVNAETRSPIDGIKQKKFSLDTGAARVNLPGLIDGIIGMKLG 304
Query: 218 DQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRG 275
+Q+ P D L G ++EVF +D+A ++ + S + +
Sbjct: 305 EQRTFPITMPNDWPQAFLRGVTADFTVDLREVFENTVPDPTDDIASQIYPDATSIAEAKE 364
Query: 276 LCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK 335
+ K++++ ++ Q ++D ++ +P S+VE + + E Q
Sbjct: 365 KILEAQKENTKAMLEQATNEALVDALAAICDAPLPASIVEETGRQMYSEKMLEAQIGQQM 424
Query: 336 SQNV------DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSAL---YQ 386
S +V + +E L+ + V + + NIEVTEEE ++ + +
Sbjct: 425 SMDVINQLAAPEMVDEYLRTNKESIELIVRRTVACEELFRLENIEVTEEEFKAEVVSAKE 484
Query: 387 QLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
+ R+ + + I K +D + + I
Sbjct: 485 EFERYGTE--------YDVQRLVEQAGEVIEARKSLDWLREHATIT 522
>gi|89897902|ref|YP_515012.1| trigger factor [Chlamydophila felis Fe/C-56]
gi|89331274|dbj|BAE80867.1| FKBP-type peptidyl-prolyl cis-trans isomerase [Chlamydophila felis
Fe/C-56]
Length = 441
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 64/432 (14%), Positives = 149/432 (34%), Gaps = 12/432 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
V + G +V L + I+ I+ + GFR GK P I S Y
Sbjct: 11 SVNIEEQPGCVVSAEVKTTPQLLDKLHKQAIKKIKKDVVLPGFRKGKAPDDIIISRYPSQ 70
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E +I+ + S D R +I + + + +
Sbjct: 71 VSRELNQLLIQSTYQALSSVGDRRPLSPQAIKSTS----VAKADLNEGGQVDFTYEAFPV 126
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
L I ++ +E+++ + I+ S+ GD +++ VS
Sbjct: 127 ISDISWGKLALPEEAPIKDITNEEMEKGLLNISYFFATKTPVTRPSQEGDFISLSLHVSK 186
Query: 182 DNVI-LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N +N F + ++ E +G+ +G + P+ S +
Sbjct: 187 QNEEGTPIAIFENKYFKLCEEEMTDSFKEKFLGISSGHRVTEIITSPDIQSFLN----GD 242
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
L F++ V + ++++ A +L ES ++ +++ ++ + + +
Sbjct: 243 VLTFTVNAVIEVVAPELDDEKARQLQAESLEDLKKKLRVQLENQAKDKHHHQRFSEAENA 302
Query: 301 ISNKYTFDVPESLVENEYNG-ILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+++ FD+P S+ E+ +K+ ++ + LQ AK+ +
Sbjct: 303 LASIVDFDLPTSMFEDRLAMLTREKLLNARLIQYCSDAELEDKKSDLLQEAEAEAKKTLK 362
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ I + + ++ EE+Q + R+ + + + + + R +
Sbjct: 363 LYFLANKIFTEEKLVISREELQYMMDVCSRERYGMQPPRDISN-EALQELVMAARDRLTY 421
Query: 419 DKVIDHILKSVQ 430
K I+ +L +
Sbjct: 422 HKAIERVLSKAK 433
>gi|54020400|ref|YP_115746.1| trigger factor [Mycoplasma hyopneumoniae 232]
gi|67461696|sp|Q601G9|TIG_MYCH2 RecName: Full=Trigger factor; Short=TF
gi|53987573|gb|AAV27774.1| trigger factor (prolyl isomerase) [Mycoplasma hyopneumoniae 232]
Length = 465
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 73/471 (15%), Positives = 184/471 (39%), Gaps = 22/471 (4%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETID 68
E + ++ + S + + + + + +K +++GFR GKVPL ++ + E
Sbjct: 9 ESAELKIKLTADSKKWAEFYQKAEQKQAAKVSLRGFRKGKVPLEKARAYLNPQAVFEL-- 66
Query: 69 EIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISS 128
+ L + +++AA + N ES I + + +L++ Y + P+I++
Sbjct: 67 -----ALRMFLPELEKQAATNIIDSDNVIESPIFNIVNMDKNNLEIEFLYPVYPEIKLPD 121
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILED 188
+ +L+ I ++ +++I+ Q ++ + F +IGD + ++ +D+ +
Sbjct: 122 YKNLKTKFAIKKITKEDIELQKQKLLEAKGRFIEVNRPVKIGDVINFNFKGFIDDEPFDG 181
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKE 248
+N +GS + E LVGL+ + +I FPE++ + A KK R I +
Sbjct: 182 GEGENFDLRIGSNSFIAGFEEQLVGLEIKKEADIYVTFPENYQVHTYANKKARFRVKINK 241
Query: 249 VFSPLPVVVNNDLA---VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
+ P + N+ E+ S + ++ + + ++ L I +
Sbjct: 242 IKENQPAKLTNEFVASLKIQNVETISQLEVYLENLTERENIERAKIDFQKNALTEIGEQV 301
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKRRVLTG 361
+ + L+ E + + + + +++ + + AK+ +
Sbjct: 302 EVPLAKKLINLEIERLNEVFHSTLKQQEIPLKEYLKITKFTEKDIYDQFEVEAKKLLKNS 361
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ I + + T++E +S + + +++ + + I KV
Sbjct: 362 FIFAEIAKLEGLVPTQQEYESHVEKLAKFTGKSVQEISETVSYNEIQIN-----ITNQKV 416
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEI 472
ID +++ + + N +++ E+ ++ E +E E
Sbjct: 417 IDKLIE---FNHETKDEEIVNKNQNDNEIEQDKEQKDNNEEKIKQENNLEN 464
>gi|255534832|ref|YP_003095203.1| Cell division trigger factor [Flavobacteriaceae bacterium 3519-10]
gi|255341028|gb|ACU07141.1| Cell division trigger factor [Flavobacteriaceae bacterium 3519-10]
Length = 444
Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats.
Identities = 55/457 (12%), Positives = 154/457 (33%), Gaps = 23/457 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + + L V + + + +++ + A + GFR GKVPLS ++ Y
Sbjct: 1 MNVTATNHDEVSALLTVTLDKSDYKEKVEKQLINYAKNAQVPGFRKGKVPLSMVRKQYES 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I E I++ + E + + ++ R +P + + +++S + ++ + I
Sbjct: 61 GIAFEEINKQVSEALNGYVQEKGLRLVGQPVPQPVD-DLNLSSEQLSVAFEVGYEPEFSI 119
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+ ++ + + + ++ AE + EI V + +
Sbjct: 120 DLSKYEAPHFKVEASDKEIGQSIENMQKRFAEQVPQEAIGDDSHIALEISQVVEENAEGA 179
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
++ + + + V + E + +
Sbjct: 180 HNHPPKSIVVNADKKAAFALVKDLKMDGSVKVSKEELQNNEELATELGFNKEETAHLHHD 239
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++ +K+ + +N +L ++ E K+K + +Q ++
Sbjct: 240 QIEVKVKDFYGLNLAELNQELFDKVYGEGNITSEEELKAKVKTELDEYFQQNADVHFVNK 299
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
I + + + E + + +N+ ++ + E + ++
Sbjct: 300 I-------LGQINEKEEVKLPEAFLIKWLMFSNENVKDENQAKEILEAE-----RNQLKY 347
Query: 361 GIVLGTIGEKNNIEVTEEEM----QSALYQQLGRFP------GHEKKMLDHFQKYPNALA 410
I+ G + N I++ ++ + + QL + +K K +
Sbjct: 348 QILEGKLMNDNEIKLEYSDVLNQAEQLVRNQLAIYGIHHLSDEEIQKYAVEMLKDQEQVR 407
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
++ + + K+ D IL+ + V+ ++ D+ + +
Sbjct: 408 QISSEVGMAKLKDVILEKAKKVETAISHDEFLEEVKK 444
>gi|160903143|ref|YP_001568724.1| trigger factor domain-containing protein [Petrotoga mobilis SJ95]
gi|160360787|gb|ABX32401.1| trigger factor domain protein [Petrotoga mobilis SJ95]
Length = 460
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 73/468 (15%), Positives = 185/468 (39%), Gaps = 29/468 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + ++ + + + ++ + +I +GFR GKVP IK G
Sbjct: 19 MEKTLLSQDKNVKKYLIKFSKDEIEKIEDQIVREINQHYTFEGFRKGKVPKQVIKLRLGP 78
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ ++E E+ +I + + I + ++ +
Sbjct: 79 DFNNMLLEEAEHELDHKIREEENL------------LFPIIVESKAQDEEHIEFEVLLHT 126
Query: 121 LPQIEISSFDDLQVTQDI-CEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P+I + F+++ V EV E + R++ ++ ++N + KE + GD V ++Y +
Sbjct: 127 YPEITKTEFENITVKIPESKEVVEDFVQRRLNDLLESNAILDPKEEPIQYGDYVRINYDL 186
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+N + +++ + + + E + L+G K+G++ E+E K+ GKK
Sbjct: 187 VDENGEIIKSNEEEEIVVRENDER--ELVKNLLGKKSGNEFELE---------KEDQGKK 235
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ I + ++ +N++ A + E+ + ++ + ++ ++ + + V I
Sbjct: 236 LVQKVRIAQAYTRRLPELNDNFAKELNIEVETLNDLKEMLKKEGEEAVKNWQDEFVINYI 295
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
L + N D+ E + + + ++ + + ++ + + + A
Sbjct: 296 LSELPNYVDIDISEESINYYIDSTINDLKSKDKYEE-NLKKFENDENKLREEIKKSALNW 354
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ +V+ I +NNI+V EE+ + + + + P E+
Sbjct: 355 IKEMVVIEKISLENNIKVGNEELSQEIKNFSTMYGLPFSRAQEIISSNPELSNEILWNKL 414
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+KV I + VQIV+ ++ ++ + + E+ + + E +
Sbjct: 415 REKVAQFIKEKVQIVE--ISKEEFEGENVTPNEEQKEEVITDDEASEE 460
>gi|160945719|ref|ZP_02092945.1| hypothetical protein FAEPRAM212_03251 [Faecalibacterium prausnitzii
M21/2]
gi|158443450|gb|EDP20455.1| hypothetical protein FAEPRAM212_03251 [Faecalibacterium prausnitzii
M21/2]
Length = 324
Score = 113 bits (282), Expect = 6e-23, Method: Composition-based stats.
Identities = 54/326 (16%), Positives = 132/326 (40%), Gaps = 12/326 (3%)
Query: 117 SYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVD 176
+ + +P + + L T+ + V +K ++ + +A+ + F + + G +VT+D
Sbjct: 4 TANTMPAATLGQYKGLAFTRRVRPVSDKAVEADIGNLARVHAPFVPTDAPAARGMRVTLD 63
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ ++ + D + V ++G+ L E + G G+ + +P D + +L+
Sbjct: 64 FEGFLEGAPIPDSRMEAVTVVLGTGQLMPAAEEAVYGHCAGETFRFDFTYPADFRVPELS 123
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
G+ + + V V++ LA LG+ A+R +K + E +
Sbjct: 124 GRTAQFEICLHTVERKQVPPVDDALAKSLGYADLEALRESLREKKRLSHEANADRIAGAA 183
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ----NVDSIDEEDLQYYHM 352
+LD T ++P L+ + ++R + + + + E+ + Y
Sbjct: 184 LLDMAGANLTVELPAELLAQNAEYQMNQLRQRLRKSRMTMELYCKSAGLTPEQVREGYRK 243
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+R++ + + I E I VT++E+ + + + E+++ + +
Sbjct: 244 EAERQLRAMLAVRAIAEAEKITVTQQEVDAEIARLSKLHDTPEEEIRKVLSRD-----AI 298
Query: 413 RAPIFEDKVIDHILKSV---QIVDRK 435
A + KV +L +V+++
Sbjct: 299 AAAVTNQKVQRFLLDHAALTSVVEKE 324
>gi|228469439|ref|ZP_04054447.1| putative fkbp-type peptidyl-prolyl cis-transisomerase
[Porphyromonas uenonis 60-3]
gi|228309014|gb|EEK17657.1| putative fkbp-type peptidyl-prolyl cis-transisomerase
[Porphyromonas uenonis 60-3]
Length = 475
Score = 113 bits (281), Expect = 8e-23, Method: Composition-based stats.
Identities = 60/472 (12%), Positives = 161/472 (34%), Gaps = 34/472 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + L++ + S + + ++++ +R A + GFRPGK P S I+ YG+
Sbjct: 1 MNISHELKDDSVVLLNITLSSEDIKEQVADQLKHLRKTAEMPGFRPGKTPASIIEKKYGQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ I+E+ E + L ++ + +E D KL++S +
Sbjct: 61 AVRFRVINEMTSEEIRHYLKEQGIHTVGGLIMEQDENTYTPE------QTDYKLQISAGL 114
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+PQ + + + + +++EID+ + +N E + +
Sbjct: 115 MPQFPETIDSSVTLPHYTVQANDEEIDQMIQNARENAGERTEVEDVQDKDVLYVSVQELD 174
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG--- 237
+ +I+ E ++ GD I+ D++ ++A
Sbjct: 175 DKGQHAIEGITLEESYIMPLYVTNEEIRAEILKAHKGDTLTIDLHKAYDNNDVEIASFLQ 234
Query: 238 --------KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
K IK + P ++ L + + + +
Sbjct: 235 IKQEEVHEHKNPFEIQIKRILRNNPSPIDEKLFKLMLGPTTKVTNE-------EELRAEL 287
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
++ + S+ +T V + +VE + + + +E +
Sbjct: 288 KRLQGERNDAMASDIFTTVVSKYIVEKIQGLTFPDKHLALLLNEKTEEETQEAYDERINK 347
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP----GHEKKMLDH---- 401
+ + + + +G + E+ + ++ + +Q+ ++++
Sbjct: 348 ILPYVRYQAMLASLNKQLGVEVPDELVRKIVREGVMRQIQSAGLGQLLSNDELVESIVNS 407
Query: 402 -FQKYPNALAELRAPIFEDKVIDHILKSVQIVD-RKVTFDQLFDNSSESSPE 451
+K L + E + + + V + + + +T +L++ ++ E
Sbjct: 408 TIEKNDEQLFSAKEQAKEQALAAKVQELVTLDEQKPLTIKELYEVHADLQKE 459
>gi|329943256|ref|ZP_08292030.1| Bacterial trigger factor protein [Chlamydophila psittaci Cal10]
gi|332287835|ref|YP_004422736.1| trigger factor [Chlamydophila psittaci 6BC]
gi|313848407|emb|CBY17411.1| trigger factor [Chlamydophila psittaci RD1]
gi|325507286|gb|ADZ18924.1| trigger factor [Chlamydophila psittaci 6BC]
gi|328814803|gb|EGF84793.1| Bacterial trigger factor protein [Chlamydophila psittaci Cal10]
gi|328915096|gb|AEB55929.1| trigger factor, putative [Chlamydophila psittaci 6BC]
Length = 441
Score = 112 bits (280), Expect = 9e-23, Method: Composition-based stats.
Identities = 65/432 (15%), Positives = 152/432 (35%), Gaps = 12/432 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
V + G +V L + I+ I+ + GFR GK P I S Y
Sbjct: 11 SVNLEEQPGCVVSAEVKTTPQLLDKLHKQAIKKIKKDVVLPGFRKGKAPDGIIVSRYPSQ 70
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E +I+ + S D R +I +T I +
Sbjct: 71 VTRELNQLLIQSAYQALGSVGDRRPLSPQAIKSTS----VTKADINEGGQVNFTYEAFPT 126
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
L + ++ ++E+++ + I+ S+ GD +++ VS
Sbjct: 127 ISDIPWDKLSLSEEPAVKDITDEEMEKGLLNISYFFATKTPVTRTSQEGDFISLSLHVSK 186
Query: 182 DNVI-LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N + +N F + ++ +G+ G + PE S +
Sbjct: 187 QNEEGVPTPIFENKYFKLCEEEMTDAFKTKFLGISAGHRVTEVISSPEIQSFLN----GD 242
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
L F++ V + +++D A +L ES ++ +++ ++ Q+ + +
Sbjct: 243 VLTFTVNAVIEVVAPELDDDKARQLQAESLEDLKKKLRIQLENQAKDRQHQQRFAEAENA 302
Query: 301 ISNKYTFDVPESLVENEYNG-ILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+++ FD+P S++E+ +K+ + +++ + L+ + AK+ +
Sbjct: 303 LASIIDFDLPTSMLEDRLAMLTREKLLNARLIQYCSDEELENKKSDLLKEAELEAKKTLK 362
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ I + ++ EE+Q + R+ + + + + R +
Sbjct: 363 LFFLANKIFNDEKLVISREELQYMMDVCSRERYGMQPPRDISQ-EALQELVMAARDRLTY 421
Query: 419 DKVIDHILKSVQ 430
K ++ +L +
Sbjct: 422 HKAMEKVLSKAK 433
>gi|309790149|ref|ZP_07684721.1| trigger factor [Oscillochloris trichoides DG6]
gi|308227734|gb|EFO81390.1| trigger factor [Oscillochloris trichoides DG6]
Length = 502
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 64/521 (12%), Positives = 167/521 (32%), Gaps = 81/521 (15%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + L++ I ++++ ++ + K I+GFRPGK P S I+ YG+
Sbjct: 1 MKVTTEKLPKSLLALEIEIDADQVERGLDKAARRLSQKFPIRGFRPGKAPRSIIERSYGR 60
Query: 61 -SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++ E D++I + + L + P++ I R++
Sbjct: 61 PALMEEATDDLINKAYRDALDQEKISPVGPPNLE-----------SITSYEPFTFRVTVP 109
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY-- 177
I P + + + +++ + + EK+I+R+M + + +V + + + +
Sbjct: 110 IAPTVTVGDYRGIRLDLEATSISEKDIEREMERLREKHVVLKELDELRPAQEGDQISVLL 169
Query: 178 -------------------------TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILV 212
D+ +D ++ AD +
Sbjct: 170 DTEFDDDDEDYDDDEEDEDDDDDDDADDQDDDDDDDADDQDDDDAEDDADDQDAEDDADD 229
Query: 213 GLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESA 272
G+ + ++ + A + + + + + +VR
Sbjct: 230 ADDDGEIQTLDLIPGRLVTELHEALVGLNVGDYTEVTAVM--PDDHQNESVRGKTVIFKV 287
Query: 273 MRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA 332
++I E L + LD + K ++ ++ N +++ ++
Sbjct: 288 KLKGIQERILPTWEELPSLENFEGSLDDLRTKIQGNLEQNARNNAERKLVEAYVNQLVEM 347
Query: 333 NQKSQNVDSIDEEDLQYYHML--------------------------------AKRRVLT 360
+ + E + H A++R T
Sbjct: 348 TEFDIPDVMVRELAHEMLHEQGHQFERYGITLEQMLQYRGQTHDEAIDALMPDAEQRTKT 407
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRF-PGHEKKMLDHFQKYPNALAELRAPIFED 419
+ L + E I +T +E++ + + + +++ + + ++ + +
Sbjct: 408 TLALSRLVEHEGIGITGDEVEEQIALIVNDYDEEQRPNIINTLRS--QMINDVVNMVIDR 465
Query: 420 KVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKV 460
K+ I++ T L +E + E + S+
Sbjct: 466 KLRARIIEIAT-----GTAPALETPEAEPAAEVASEPSAPE 501
>gi|62185489|ref|YP_220274.1| trigger factor [Chlamydophila abortus S26/3]
gi|81312363|sp|Q5L4W8|TIG_CHLAB RecName: Full=Trigger factor; Short=TF
gi|62148556|emb|CAH64327.1| trigger factor [Chlamydophila abortus S26/3]
Length = 441
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 64/432 (14%), Positives = 151/432 (34%), Gaps = 12/432 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
V + G +V L + I+ I+ + GFR GK P I S Y
Sbjct: 11 SVNLEEQPGCVVSAEVKTTPQLLDKLHKQAIKKIKKDVILPGFRKGKAPDGIIVSRYPSQ 70
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E +I+ + S D R +I +T I +
Sbjct: 71 VTKELNQLLIQSAYQALASVGDRRPLSPQAIKSTS----VTKADINEGGQVNFTYEAFPT 126
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
L + ++ ++E+++ + I+ S+ GD +++ VS
Sbjct: 127 ISDIPWDKLSLSEEPAVKDITDEEMEKGLQNISYFFATKTPVTRTSQEGDFISLSLHVSK 186
Query: 182 DNVI-LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N + +N F + ++ +G+ G + PE S +
Sbjct: 187 QNEEGVPTPIFENKYFKLCEEEMTDAFKTKFLGISAGHRVTEIIASPEIQSFLN----GD 242
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
L F++ V + +++D A +L ES ++ +++ ++ Q+ + +
Sbjct: 243 VLTFTVNAVIEVVAPELDDDKARQLQAESLEDLKKKLRIQLENQAKDRQHQQCFAEAENA 302
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSS-ANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+++ FD+P S++E+ + + + +++ + L+ + AK+ +
Sbjct: 303 LASIIDFDLPTSMLEDRLAMLTRAKLLNARLIQYCSDEELENKKSDLLKEAELEAKKTLK 362
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ I + ++ EE+Q + R+ + + + + R +
Sbjct: 363 LFFLANKIFNDEKLVISREELQYMMDVCSRERYGMQPPRDISK-EALQELVMAARDRLTY 421
Query: 419 DKVIDHILKSVQ 430
K ++ +L +
Sbjct: 422 HKAMEKVLAKAK 433
>gi|148887038|sp|Q4A8L6|TIG_MYCH7 RecName: Full=Trigger factor; Short=TF
gi|144575299|gb|AAZ53523.2| trigger factor [Mycoplasma hyopneumoniae 7448]
Length = 442
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 68/426 (15%), Positives = 170/426 (39%), Gaps = 19/426 (4%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETID 68
E + ++ + S + + + + + +K +++GFR GKVPL ++ + E
Sbjct: 9 ESAELKIKLTADSKKWAEFYQKAEQKQAAKVSLRGFRKGKVPLEKARAYLNPQAVFEL-- 66
Query: 69 EIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISS 128
+ L + +++AA + N ES I + + +L++ Y + P+I++
Sbjct: 67 -----ALRMFLPELEKQAATNIIDSDNVIESPIFNIVNMDKNNLEIEFLYPVYPEIKLPD 121
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILED 188
+ +L+ I ++ +++I+ Q ++ + F +IGD + ++ +D+ +
Sbjct: 122 YKNLKTKFAIKKITKEDIELQKQKLLEAKGRFIEVNRPVKIGDVINFNFKGFIDDEPFDG 181
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKE 248
+N +GS + E LVGL+ + +I FPE++ + A KK R I +
Sbjct: 182 GEGENFDLRIGSNSFIAGFEEQLVGLEIKKEADIYVTFPENYQVHTYANKKARFRVKINK 241
Query: 249 VFSPLPVVVNNDLA---VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
+ P + N+ E+ S + ++ + + ++ L I +
Sbjct: 242 IKENKPAKLTNEFVASLKIQNVETISQLEVYLENLTERENIERAKIDFQKNALTEIGEQV 301
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKRRVLTG 361
+ + L+ E + + + + +++ + + AK+ +
Sbjct: 302 EVPLAKKLINLEIERLNEVFHSTLKQQEIPLKEYLKITKFTEKDIYDQFEVEAKKLLKNS 361
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ I + + T++E +S + + +++ + + I KV
Sbjct: 362 FIFAEIAKLEGLVPTQQEYESHVEKLAKFTGKSVQEISETVSYNEIQIN-----ITNQKV 416
Query: 422 IDHILK 427
ID +++
Sbjct: 417 IDKLIE 422
>gi|72080488|ref|YP_287546.1| trigger factor [Mycoplasma hyopneumoniae 7448]
Length = 436
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 68/426 (15%), Positives = 170/426 (39%), Gaps = 19/426 (4%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETID 68
E + ++ + S + + + + + +K +++GFR GKVPL ++ + E
Sbjct: 3 ESAELKIKLTADSKKWAEFYQKAEQKQAAKVSLRGFRKGKVPLEKARAYLNPQAVFEL-- 60
Query: 69 EIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISS 128
+ L + +++AA + N ES I + + +L++ Y + P+I++
Sbjct: 61 -----ALRMFLPELEKQAATNIIDSDNVIESPIFNIVNMDKNNLEIEFLYPVYPEIKLPD 115
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILED 188
+ +L+ I ++ +++I+ Q ++ + F +IGD + ++ +D+ +
Sbjct: 116 YKNLKTKFAIKKITKEDIELQKQKLLEAKGRFIEVNRPVKIGDVINFNFKGFIDDEPFDG 175
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKE 248
+N +GS + E LVGL+ + +I FPE++ + A KK R I +
Sbjct: 176 GEGENFDLRIGSNSFIAGFEEQLVGLEIKKEADIYVTFPENYQVHTYANKKARFRVKINK 235
Query: 249 VFSPLPVVVNNDLA---VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
+ P + N+ E+ S + ++ + + ++ L I +
Sbjct: 236 IKENKPAKLTNEFVASLKIQNVETISQLEVYLENLTERENIERAKIDFQKNALTEIGEQV 295
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKRRVLTG 361
+ + L+ E + + + + +++ + + AK+ +
Sbjct: 296 EVPLAKKLINLEIERLNEVFHSTLKQQEIPLKEYLKITKFTEKDIYDQFEVEAKKLLKNS 355
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ I + + T++E +S + + +++ + + I KV
Sbjct: 356 FIFAEIAKLEGLVPTQQEYESHVEKLAKFTGKSVQEISETVSYNEIQIN-----ITNQKV 410
Query: 422 IDHILK 427
ID +++
Sbjct: 411 IDKLIE 416
>gi|58698769|ref|ZP_00373652.1| trigger factor, putative [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534721|gb|EAL58837.1| trigger factor, putative [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 288
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 125/273 (45%), Gaps = 6/273 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
E + LK E ++ + S+ + N R+++I A GFR GK+P + + Y L
Sbjct: 19 KELSIDKLKYEYEITVGSDYIKQKVNSRLQEIAENAKSPGFRAGKMPYDLVVANYKNEAL 78
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
I+ I +++ K + ++ + P + + G + +LS++ +P+
Sbjct: 79 EYVINNTIDYCSSDLMKKIEVKSHIYPKVDVISLP---DLGKENEEGNFVYKLSFESMPE 135
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIA---KNNVAFEVKETESEIGDKVTVDYTVS 180
+ + D + + + +++E++I + I N + + +++ GDK+ +D+
Sbjct: 136 VPMIDLDKINLKKIEAKIEEEDIKEFIDSIKTKFPNFASVDDASYQAKDGDKLIIDFEGR 195
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ N + + S KN +GS + + L G+K + K + FPE++ LAG++
Sbjct: 196 IRNKLFQGGSSKNFAVNLGSGTFINGFEDQLTGMKKVETKNFKLKFPENYQAISLAGQEA 255
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAM 273
+ + E+ ++++A +GF+ S +
Sbjct: 256 DFSVRVNEIQIAKDFENDDEIAKSIGFKDYSLL 288
>gi|269302634|gb|ACZ32734.1| putative trigger factor protein [Chlamydophila pneumoniae LPCoLN]
Length = 442
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 73/434 (16%), Positives = 159/434 (36%), Gaps = 13/434 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
V + S G V + L + ++ I+ + + GFR GK P I S Y +
Sbjct: 11 SVDLEESPGCIVSALVKVSPEVLNKLNKQALKKIKKEITLPGFRKGKAPDDVIASRYPTN 70
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E + + ++ LS +R RP + IT ++ ++
Sbjct: 71 VRKELGELVTQDAY-HALSTVGDR---RPLSPKAVRSNSITQLDLQEGAKVEFSYEAFPA 126
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
L + E+ + +I++ + I E S+ GD +++ VS
Sbjct: 127 ISDLPWENLSLPQEEAASEISDSDIEKGLTNIGMFFATKTPVERPSQEGDFISISLHVSK 186
Query: 182 DNVILEDQSK--KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
N + +N F + ++ E +G+ TG + PE S +
Sbjct: 187 SNDENASSAAIFENKYFKLSEEEMTDAFKEKFLGISTGHRVVETITSPEIQSFL----RG 242
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
L F++ V ++++ A +L ES ++ ++++ ++ QK + D
Sbjct: 243 DTLTFTVNAVIEVSIPEIDDEKARQLQAESLDDLKAKLRIQLEKQAKDKQLQKRFSEAED 302
Query: 300 YISNKYTFDVPESLVENEYN-GILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
++ F++P SL+E + +K+ + ++ E ++ A + +
Sbjct: 303 ALAMLVDFELPTSLLEERISLITREKLLNARLIQYCSDEELEKRKSELIKEAEEDATKAL 362
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ I + ++ EE+Q + RF K + + + R +
Sbjct: 363 KLLFLTHKIFSDEKLTISREELQYMMDVCSRERFGQQPPKDISN-DTLQELVMSARDRLT 421
Query: 418 EDKVIDHILKSVQI 431
K I+H+L+ ++
Sbjct: 422 YSKAIEHVLRKAEL 435
>gi|15618757|ref|NP_225043.1| trigger factor [Chlamydophila pneumoniae CWL029]
gi|15836381|ref|NP_300905.1| trigger factor [Chlamydophila pneumoniae J138]
gi|16752191|ref|NP_445558.1| trigger factor [Chlamydophila pneumoniae AR39]
gi|33242208|ref|NP_877149.1| trigger factor [Chlamydophila pneumoniae TW-183]
gi|12230738|sp|Q9Z758|TIG_CHLPN RecName: Full=Trigger factor; Short=TF
gi|4377163|gb|AAD18986.1| Trigger Factor-peptidyl-prolyl isomerase [Chlamydophila pneumoniae
CWL029]
gi|7189934|gb|AAF38797.1| trigger factor [Chlamydophila pneumoniae AR39]
gi|8979222|dbj|BAA99056.1| trigger factor-peptidyl-prolyl isomerase [Chlamydophila pneumoniae
J138]
gi|33236719|gb|AAP98806.1| trigger factor [Chlamydophila pneumoniae TW-183]
Length = 442
Score = 112 bits (278), Expect = 2e-22, Method: Composition-based stats.
Identities = 73/434 (16%), Positives = 159/434 (36%), Gaps = 13/434 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
V + S G V + L + ++ I+ + + GFR GK P I S Y +
Sbjct: 11 SVDLEESPGCIVSALVKVSPEVLNKLNKQALKKIKKEITLPGFRKGKAPDDVIASRYPTN 70
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E + + ++ LS +R RP + IT ++ ++
Sbjct: 71 VRKELGELVTQDAY-HALSTVGDR---RPLSPKAVRSNSITQFDLQEGAKVEFSYEAFPA 126
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
L + E+ + +I++ + I E S+ GD +++ VS
Sbjct: 127 ISDLPWENLSLPQEEAASEISDSDIEKGLTNIGMFFATKTPVERPSQEGDFISISLHVSK 186
Query: 182 DNVILEDQSK--KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
N + +N F + ++ E +G+ TG + PE S +
Sbjct: 187 SNDENASSAAIFENKYFKLSEEEMTDAFKEKFLGISTGHRVVETITSPEIQSFL----RG 242
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
L F++ V ++++ A +L ES ++ ++++ ++ QK + D
Sbjct: 243 DTLTFTVNAVIEVSIPEIDDEKARQLQAESLDDLKAKLRIQLEKQAKDKQLQKRFSEAED 302
Query: 300 YISNKYTFDVPESLVENEYN-GILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
++ F++P SL+E + +K+ + ++ E ++ A + +
Sbjct: 303 ALAMLVDFELPTSLLEERISLITREKLLNARLIQYCSDEELEKRKSELIKEAEEDATKAL 362
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ I + ++ EE+Q + RF K + + + R +
Sbjct: 363 KLLFLTHKIFSDEKLTISREELQYMMDVCSRERFGQQPPKDISN-DTLQELVMSARDRLT 421
Query: 418 EDKVIDHILKSVQI 431
K I+H+L+ ++
Sbjct: 422 YSKAIEHVLRKAEL 435
>gi|47458920|ref|YP_015782.1| trigger factor [Mycoplasma mobile 163K]
gi|67461765|sp|Q6KIK5|TIG_MYCMO RecName: Full=Trigger factor; Short=TF
gi|47458248|gb|AAT27571.1| trigger factor [Mycoplasma mobile 163K]
Length = 483
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 82/471 (17%), Positives = 180/471 (38%), Gaps = 25/471 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M E + + + V + + ++ IKGFRPGK + K
Sbjct: 1 MTKTEINKKDWEINVVVSSEKKLWKAKQDLALSNLAKTLKIKGFRPGKASVEAAKKHLNP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E ++I + +I S+ I ++ ++ +L L+ SY I
Sbjct: 61 EQIQEEAVKLIANDLVKIASES----IDESYIVLDSPIYEVEK---MSDAELDLKFSYPI 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF---EVKETESEIGDKVTVDY 177
P+ +I ++ L+VT +V ++++D ++ +I + N + + D V +DY
Sbjct: 114 YPEFKIKNYKSLKVTLSRAKVSKEDVDSEIEKIREKNALLIKKTKDQGKVAKTDTVNIDY 173
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+D + + + ++GS + L+G K+GD+ E++ FP+D+ AG
Sbjct: 174 VGKIDGEEFDGGKASSHELVIGSKSFIDNFEDQLIGFKSGDKVEVKVSFPDDYHSSKFAG 233
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAV---RLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
KK + I +VF+ V N+DL ++ + M IK + + K
Sbjct: 234 KKAIFDVKINDVFTKEKPVKNDDLVKFLNNPKLKTLAEMENYFKDLIKNEKDEKSKASFK 293
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYY 350
+ I + I N+ VP ++ E +++ ++ + ++ ++ +
Sbjct: 294 KDIFEKIMNENEIPVPRLILMKETTNAIREFEKDVKKYGFTVEKYLKMLNMNSKDFVTNL 353
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
+ ++ ++ ++ I + IE E+ + + + + +A
Sbjct: 354 NKESELKLKEALIYTEISKLEKIEAQPEDYDVKYKKFAKLYNVSLDSVKSMITQQQAQVA 413
Query: 411 ELRAPIFEDKVIDHILKSVQIVDRKVTFD---QLFDNSSESSPEKLLDKSS 458
I +K+++ ++K I V + E + EK S
Sbjct: 414 -----IVNEKILEFLIKHNAIEKNSVGEEPKLSTTKKVVEPTEEKTRKDSK 459
>gi|311087861|gb|ADP67940.1| trigger factor [Buchnera aphidicola str. JF98 (Acyrthosiphon
pisum)]
Length = 380
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 62/387 (16%), Positives = 143/387 (36%), Gaps = 13/387 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + ++ + + IP + +S + IR I GFR GK P+ I+ YG
Sbjct: 1 MNFFMEKNKDAGHRVTIKIPKTTVNNSLLQEFIKIRKTTKINGFRKGKTPIRVIQEKYGS 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+I + +++++ E L + P I++ + + + Y++
Sbjct: 61 AIYYDIFKKLMQKFFYEFLKTEKIKIIGSPKFYIHQ-------DEDKKKEYFEYSVIYEL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
PQ +I ++V + E+ E++I + + + + D+VT++Y +
Sbjct: 114 YPQFQIKDIKQIKVNKINVEITEEDIKKNIETNKNKKNIWNPVNKAVKSYDRVTINYCIY 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N ++ K N+ FIV L + ++ D + F H K+L K +
Sbjct: 174 EKNKKIKKFDKDNISFIVSKNTLIPQLNYKIINHFVNDIIFFKIKFHAFHPEKELQNKDI 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
I ++ + ++ + + + ++ QI+
Sbjct: 234 TFKIKIIKIEKKQELESEKSNKKNITEKKTIQTDYQTIKNNLHSQINIITDKYLENQIIQ 293
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
I K +P L + E + ++ + + +N + ++++ K+R+
Sbjct: 294 KIVEKNILLLPPLLFQKEIKNLYKQYTKQ-----YQEENSNILEKKYHMSLDSEVKKRLY 348
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQ 386
I++ I N + E +Q + +
Sbjct: 349 FQIIIEQIILNNKLFADENNIQKLIKK 375
>gi|167949876|ref|ZP_02536950.1| trigger factor [Endoriftia persephone 'Hot96_1+Hot96_2']
gi|110589382|gb|ABG77200.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor a
molecular chaperone involved in cell division)
[Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 223
Score = 110 bits (275), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 102/219 (46%), Gaps = 10/219 (4%)
Query: 49 VPLSHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEG 108
VP+ ++ YG +L E +++ + L +++ P I + + +
Sbjct: 8 VPMRMLRRQYGSQVLQEVYGSLVESSYQDALQQQNLNPVGPPKIEPKQSDDESV------ 61
Query: 109 TVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE 168
+ +++P+IE++ + ++T+ + +V +++++ + ++ +++ E +
Sbjct: 62 ---FAYTATLEVMPEIELAKIEG-KITRPVAQVVDQDVEDMIEKLRGQRISWNPVERAAA 117
Query: 169 IGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPE 228
D+V +++ +D + S +V ++GS + L+G G+ + +E FPE
Sbjct: 118 EQDQVKINFKGIMDGEAFDGGSANDVPLVLGSNSMIDGFESGLIGALAGESRTLELKFPE 177
Query: 229 DHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF 267
D+ ++ LAGK V + EV + +++ A R+ F
Sbjct: 178 DYRVEKLAGKPVTFEVDVIEVAEAVLPELDDAFAQRVRF 216
>gi|317489935|ref|ZP_07948427.1| trigger factor [Eggerthella sp. 1_3_56FAA]
gi|316910933|gb|EFV32550.1| trigger factor [Eggerthella sp. 1_3_56FAA]
Length = 445
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 61/462 (13%), Positives = 169/462 (36%), Gaps = 35/462 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANI---KGFRPGKVPLSH---I 54
M+V EK + + L+ + + ++ + + + G +S +
Sbjct: 1 MKVTEKKLDDGRILLEAVASTAEVSHALTAAQYRFAQQMGVQPTPG-------MSVEQAV 53
Query: 55 KSLYG-KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLK 113
+ G K + + + ++ +VP + KR+ A +G ++
Sbjct: 54 EKQLGIKDLDAIVQQQAVEYLVPFAIDKRNITPA--------FPALPKAAGPLKRGQTFS 105
Query: 114 LRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDK 172
+ P E+ S++ + +T E+++ E++ Q+A+IA++ F + E GD
Sbjct: 106 FEVRVTPKPDYELKSYEPVSITVPPFEIEQAEVEEQIAQIAESYAEFVSDEPHPVEKGDG 165
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
+ + +++ S + ++ G + + + L+G+ G+ K P
Sbjct: 166 FLLALEAFQNGEKMDNLSTEGRTYLTGMGLMPEDFEKHLIGMNVGETKSFSFDLPG--MN 223
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVR 290
D G V ++KE+ + ++++ + + +A+RG + ++
Sbjct: 224 ADDKGDTVDCTVTVKEMQKKVVPAIDDEWVAKNLPMYRDAAALRGGITDRLTADRRAQYE 283
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI---DEEDL 347
+ ++ ++ + + + E ++ +R ++ + +++
Sbjct: 284 AYKLQVAASELAKRFEGRIQDEVYEAMQQTLVSNLRGQLQQQGIPFEQFVQSQGGEQQFG 343
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
M + ++ G L + + +T+E++ +A P + + Q+
Sbjct: 344 MIMMMQTREMLVQGYALDALFRHEKMTLTDEDIDAACR---SMNPQNPDAVKREMQENGR 400
Query: 408 ALAELRAPIFEDKVIDHILKSVQI-VDRKVTFDQLFDNSSES 448
A LR K +L + V++ V ++ + +
Sbjct: 401 GFA-LREAAERMKANQWLLDHAIVNVEQPVAANETAAQPAPA 441
>gi|313665405|ref|YP_004047276.1| trigger factor [Mycoplasma leachii PG50]
gi|312949363|gb|ADR23959.1| trigger factor [Mycoplasma leachii PG50]
Length = 428
Score = 109 bits (272), Expect = 8e-22, Method: Composition-based stats.
Identities = 75/422 (17%), Positives = 158/422 (37%), Gaps = 16/422 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SIL 63
EK + + + V + + + + +++ + GFR GK P S + I
Sbjct: 6 EKLVDQGQGKWTVTVDGEQWIEFLKKAKNRLKANLVVPGFRKGKAPESEVAKYLTPIKIY 65
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+E +IK L++ + R S T + +I+ DL L +
Sbjct: 66 NEAFKIVIKPAFDFALTQEN-RIQNDNSPTPVIVKVSEKEIVIDFVFDLVLEVKIGEYKN 124
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
I ++V+Q+ + + A + + + GD VT D+ VD+
Sbjct: 125 ISTVQKSTVEVSQEDVDNVIDMYRSRFAMQKEREA-----NDQIQKGDIVTFDFKGYVDD 179
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E K+ +GS + ++GLK G+ +EI FPE++ I LAGK +
Sbjct: 180 QAFEGGEAKDFVLEIGSNQFVPGFEDSMIGLKIGENQEINVKFPEEY-IPSLAGKDAKFI 238
Query: 244 FSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+IK + + +++L + + + + + + + I+D
Sbjct: 239 LNIKNIKEKILPAKDDELVKDLNLPDITTYVQLEEKVKKDVLEQKTKNSKSEFVENIIDE 298
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKR 356
I F +P+++VE + + ++ +++ EE + A
Sbjct: 299 IIKTSEFQIPKTIVERQLKDVKKEFEDQLTQQKITLDKYKEITKISQEEIDEELKNDAIH 358
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R+ + +V+ I K NI+ +EE + + L + + +K + ++ +
Sbjct: 359 RIKSFLVVNEIKNKENIKASEEAVNTKLEEFANLYGIEVEK-IKSLIDNQAIKHQVESES 417
Query: 417 FE 418
E
Sbjct: 418 LE 419
>gi|29840674|ref|NP_829780.1| trigger factor [Chlamydophila caviae GPIC]
gi|29835024|gb|AAP05658.1| trigger factor [Chlamydophila caviae GPIC]
Length = 441
Score = 109 bits (272), Expect = 9e-22, Method: Composition-based stats.
Identities = 62/432 (14%), Positives = 151/432 (34%), Gaps = 12/432 (2%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
V + G V L + I+ I+ + GFR GK P I S Y
Sbjct: 11 SVDLEEQSGCVVSATVKTTPQLLDKLHKQAIKKIKKDVVLPGFRKGKAPDGIIVSRYPSQ 70
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E +I+ + + D R +I + + + +
Sbjct: 71 VTRELNQLLIQSAYQALSTVGDRRPLSPQAIKSTS----VAKADLNEGGQVDFTYEAFPV 126
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
L + ++ ++EI++ + I+ S+ GD +++ VS
Sbjct: 127 ISDISWDKLSLTEEAPVKDITDEEIEKGLLNISYFFATKTPVTRPSQEGDFISLSLHVSK 186
Query: 182 DNVILEDQS-KKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
N + +N F + ++ +G+ +G + P+ S +
Sbjct: 187 QNEEGTPTAIFENKYFKLCEEEMTDSFKAKFLGISSGHRVTEIITSPDIQSFLN----GD 242
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
L F++ V + ++++ A +L ES ++ +++ ++ Q+ + +
Sbjct: 243 VLTFTVNAVIEVVAPELDDEKARQLQAESLEDLKKKLRIQLENQAKDKQHQQRFTEAENA 302
Query: 301 ISNKYTFDVPESLVENEYNG-ILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
++N FD+P S++E+ +K+ + ++ + L+ AK+ +
Sbjct: 303 LANIVDFDLPTSMLEDRLAMLTREKLLNARLIQYCSDEELEDKKSDLLKEAEADAKKTLK 362
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ I + ++ EE+Q + R+ + + + + + R +
Sbjct: 363 LFFLANKIFTDEKLVISREELQYMMDVCSRERYGAQPPRDISN-EALQELVMTARDRLTY 421
Query: 419 DKVIDHILKSVQ 430
K ++ +L +
Sbjct: 422 HKAMEKVLLKAK 433
>gi|330718625|ref|ZP_08313225.1| trigger factor [Leuconostoc fallax KCTC 3537]
Length = 368
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/379 (14%), Positives = 146/379 (38%), Gaps = 25/379 (6%)
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ + +D ++ + + RP+I E ++
Sbjct: 1 MYQDAMDAVLPAAYEAAVEEAGITPVGRPNIAPVSM---------EKGKAWTMQAVITTA 51
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE--VKETESEIGDKVTVDYTV 179
P IE+ + +L+V + +V ++++ ++ + + + T++E GD V +D+
Sbjct: 52 PAIELGDYLNLEVDKQDTKVTDEDVAAEIKRLQEGQAELVLQEESTKAEKGDTVIIDFDG 111
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
SVD E + +GS + L+G +G+ + FPED+ +LAGK+
Sbjct: 112 SVDGEHFEGGQANDFSLELGSGQFIPGFEDQLIGHVSGEDINVNVTFPEDYQAANLAGKE 171
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I E+ ++++ A E+ + + ++ ++ + +
Sbjct: 172 ALFEVKIHELKRKALPELDDEFAKDVDEEVETLAELEAKVKTRLSDEKAQSAQEAFEDAV 231
Query: 298 LDYISNKYT---FDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYY 350
L + +PE++++ + + + + ++ Q +++ + +
Sbjct: 232 LTKAVDNAKVDGDKIPEAMIDEDVHRQMDQYFAQLQQQGISREMFFQISGQTEDDMHKQF 291
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
A++RV T +VL I + N++ ++EE+++ + + + +++
Sbjct: 292 TDGAEKRVKTNLVLEAIVKAENVQPSDEEVEAEISRLAETYKMEVEQVRAAVSAS----- 346
Query: 411 ELRAPIFEDKVIDHILKSV 429
L+ I + + + S
Sbjct: 347 MLKHDIAMREAMKKLTDSA 365
>gi|157364286|ref|YP_001471053.1| trigger factor domain-containing protein [Thermotoga lettingae TMO]
gi|166988055|sp|A8F755|TIG_THELT RecName: Full=Trigger factor; Short=TF
gi|157314890|gb|ABV33989.1| trigger factor domain [Thermotoga lettingae TMO]
Length = 432
Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats.
Identities = 84/455 (18%), Positives = 189/455 (41%), Gaps = 28/455 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ + K + + + + ++ + + ++ I GFR G+ P ++S Y +
Sbjct: 1 MERVVKTEDKNMVVCEYTFTKDEIEEAEEVALRQVVNRVEIPGFRKGRAPKQIVRSRYPE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ SE ID ++IV +I E + P + E ++ ++ +
Sbjct: 61 TVKSEMIDFFWQKIVKQI--DEQENMLLPPILVDFELSNNRA----------RMTIEVHR 108
Query: 121 LPQIEISSFDDLQVTQ-DICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
LP +EI F+D ++ + D V + I+R++ E+ + + E KE +E D V V T+
Sbjct: 109 LPDVEIKPFEDFELKKVDKPSVMKDYIERKLKELQQTHAILEPKEGPAEYDDMVRVKMTI 168
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D ++ +Q +VG K+GD E +R F E GK
Sbjct: 169 TTDGKVIMNQKVSEYVLYKEDDRPV---VSEIVGKKSGDVVEFDRDFGE--------GKV 217
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
I++V + ++++LA +E+ ++ ++ + E + + +K Q
Sbjct: 218 YHYKIEIEQVNKRRLIDISDELAKTVSAEYETLEQLKDAIEREGNELYEKEMDEFLKTQA 277
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
LD + V E + + K+R + + ++ D+ E+ +
Sbjct: 278 LDSLVKTSQLLVSERTLSQLVETVFDKIRRDREEYEKLLKDHDNNPEKLREALKNYYITD 337
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + + +NN++V+E+E+Q+ + ++ + + ++R +
Sbjct: 338 MKETYSIRKVARENNLDVSEDEVQNEAENLAIAWGISVERAKSILKSRNDIFEDVRWELL 397
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
+ KV + I++ +IVD V ++L + E+ +
Sbjct: 398 KRKVAELIVQRAKIVD--VKPEELQNEGKEAQKNE 430
>gi|293363943|ref|ZP_06610679.1| trigger factor [Mycoplasma alligatoris A21JP2]
gi|292552433|gb|EFF41207.1| trigger factor [Mycoplasma alligatoris A21JP2]
Length = 485
Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats.
Identities = 77/480 (16%), Positives = 181/480 (37%), Gaps = 22/480 (4%)
Query: 6 KFSEGLKRELDVI--IPSNRLTDSFNERIEDIRSKANIKGFRPG-KVPLSHIKSLYGK-S 61
+ + ++V + T + + I I GFR G K+P S + + +
Sbjct: 4 TKLDKASQTVNVSYKVEGENWTKALAKSKATIAKTIKIPGFRVGKKIPQSVLDKHISQYN 63
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
++ +++++KE E + N + L +L+ ++ +L
Sbjct: 64 VVDRALNDVVKEKRFEAYQEAL-------KTAKNIYHQPNINVLKVDDKELEFEYAFVLL 116
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P FD L+ + + EK +D + E + K+ +++GD V +D+ +
Sbjct: 117 PDFSDLKFDGLKTKYHVEKFSEKMVDALIEEKLSQLAMLKTKKGAAKLGDTVVIDFKGFI 176
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
++ E + + +GS + LVG + G + +I+ FPE + +K+ GK+
Sbjct: 177 NDEAFEGGQAEKFELKLGSNQFIPGFEDQLVGKQAGWKGDIKVMFPETYYVKEYKGKEAV 236
Query: 242 LNFSIKEVFSPLPVVVNND---LAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ EV S + + + G + +R + ++K ++K + ++
Sbjct: 237 FEILLHEVKSKDTPELTVELLPIFGMPGLTTVKELRDALTLQVKFDMVHRAKEKFLQDLV 296
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLA 354
+ I + E + + + + K +E+ ++ A
Sbjct: 297 EEIIVLNKVTLHEMIYAQRVKSLNDEFNKSLKDNGIKRAEYLEVTKATEEDIMKELKTNA 356
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
++ V T V + EK +++ TE+E++ + + H L L
Sbjct: 357 EKEVKTQHVTSALFEKFSVKPTEKEIEDEYARIAKENGLSLQDTKQHLPVDRITL-YLEN 415
Query: 415 PIFEDKVIDHIL-KSVQIVDR--KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
F + ++ + ++ V++ K +L E+ + +++K ET + + A +
Sbjct: 416 NTFFNNLMKKFDPEGLKSVEKFNKEREAELQKVRKEAEQKAPKKEANKTETKKEKPAVKK 475
>gi|325829946|ref|ZP_08163404.1| putative trigger factor [Eggerthella sp. HGA1]
gi|325488113|gb|EGC90550.1| putative trigger factor [Eggerthella sp. HGA1]
Length = 432
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 58/445 (13%), Positives = 160/445 (35%), Gaps = 34/445 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANI---KGFRPGKVPLSH---I 54
M+V EK + + L+ + + ++ + + + G +S +
Sbjct: 1 MKVTEKKLDDGRILLEAVASTAEVSHALTAAQYRFAQQMGVQPTPG-------MSVEQAV 53
Query: 55 KSLYG-KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLK 113
+ G K + + + ++ +VP + KR+ A +G ++
Sbjct: 54 EKQLGIKDLDAIVQQQAVEYLVPFAIDKRNITPA--------FPALPKAAGPLKRGQTFS 105
Query: 114 LRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDK 172
+ P E+ S++ + +T E+++ E++ Q+A+IA++ F + GD
Sbjct: 106 FEVRVTPKPDYELKSYEPVSITVPPFEIEQAEVEEQIAQIAESYAEFVSDEPHPVAKGDG 165
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
+ + +++ S + ++ G + + + L+G+ G+ K P
Sbjct: 166 FLLALEAFQNGEKMDNLSTEGRTYLTGMGLMPEDFEKHLIGMNVGETKSFSFDLPG--MN 223
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVR 290
D G V ++KE+ + ++++ + + +A+RG + ++
Sbjct: 224 ADDKGDTVDCTVTVKEMQKKVVPAIDDEWVAKNLPMYRDAAALRGGITDRLTADRRAQYE 283
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI---DEEDL 347
+ ++ ++ + + + E ++ +R ++ + +++
Sbjct: 284 AYKLQVAASELAKRFEGRIQDEVYEAMQQTLVSNLRGQLQQQGIPFEQFVQSQGGEQQFG 343
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
M + ++ G L + + +T+E++ +A P + + Q+
Sbjct: 344 MIMMMQTREMLVQGYALDALFRHEKMTLTDEDIDAACR---SMNPQNPDAVKREMQENGR 400
Query: 408 ALAELRAPIFEDKVIDHILKSVQIV 432
A LR K +L +
Sbjct: 401 GFA-LREAAERMKANQWLLDHAIVN 424
>gi|257791922|ref|YP_003182528.1| trigger factor domain-containing protein [Eggerthella lenta DSM
2243]
gi|257475819|gb|ACV56139.1| trigger factor domain protein [Eggerthella lenta DSM 2243]
Length = 432
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 59/445 (13%), Positives = 161/445 (36%), Gaps = 34/445 (7%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANI---KGFRPGKVPLSH---I 54
M+V EK + + L+ + + ++ + + + G +S +
Sbjct: 1 MKVTEKKLDDGRILLEAVASTAEVSHALTAAQYRFAQQMGVQPTPG-------MSVEQAV 53
Query: 55 KSLYG-KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLK 113
+ G K + + + ++ +VP + KR+ A +G ++
Sbjct: 54 EKQLGIKDLDAIVQQQAVEYLVPFAIDKRNITPA--------FPALPKAAGPLKRGQTFS 105
Query: 114 LRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFE-VKETESEIGDK 172
+ P E+ S++ + +T E+++ E++ Q+A+IA++ F + E GD
Sbjct: 106 FEVRVTPKPDYELKSYEPVSITVPPFEIEQAEVEEQIAQIAESYAEFVSDEPHPVEKGDG 165
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
+ + +++ S + ++ G + + + L+G+ G+ K P
Sbjct: 166 FLLALEAFQNGEKMDNLSTEGRTYLTGMGLMPEDFEKHLIGMNVGETKSFSFDLPG--MN 223
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVR 290
D G V ++KE+ + ++++ + + +A+RG + ++
Sbjct: 224 ADDKGDTVDCTVTVKEMQKKVVPAIDDEWVAKNLPMYRDAAALRGGITDRLTADRRAQYE 283
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI---DEEDL 347
+ ++ ++ + + + E ++ +R ++ + +++
Sbjct: 284 AYKLQVAASELAKRFEGRIQDEVYEAMQQTLVSNLRGQLQQQGIPFEQFVQSQGGEQQFG 343
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
M + ++ G L + + +T+E++ +A P + + Q+
Sbjct: 344 MIMMMQTREMLVQGYALDALFRHEKMTLTDEDIDAACR---SMNPQNPDAVKREMQENGR 400
Query: 408 ALAELRAPIFEDKVIDHILKSVQIV 432
A LR K +L +
Sbjct: 401 GFA-LREAAERMKANQWLLDHAIVN 424
>gi|218961378|ref|YP_001741153.1| hypothetical protein CLOAM1084 [Candidatus Cloacamonas
acidaminovorans]
gi|167730035|emb|CAO80947.1| hypothetical protein CLOAM1084 [Candidatus Cloacamonas
acidaminovorans]
Length = 431
Score = 107 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 56/411 (13%), Positives = 141/411 (34%), Gaps = 34/411 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + +E+++ IPS + + + ++ ++ GFR GK PL+ ++ +Y
Sbjct: 1 MQVEFNQLNAVTKEINLTIPSEEVDKEYEKYLKKSAQDISVPGFRKGKAPLNVVERMYED 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + + I E+ +++ + + + P + + E D+ +++ +
Sbjct: 61 KIRNYFYEYYIDEVFSKVVKENEIKYLHYPEVKDVQW---------EKGNDMTIKIEIEH 111
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +E + L V ++E+ + N +V+ V + + +
Sbjct: 112 EPVLEFKQIEGLTVPYKPILLEEEVNNFIKELQKSNCRIIDVETARETDNVNVEITFQHN 171
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPE------DHSIKD 234
+ F G+ E+L GLK GD+ +++ E D+ +
Sbjct: 172 NETFTRTGS------FFAGTKHNLDMLPELL-GLKIGDKTKVKLTGREIINSTQDYKLPL 224
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
+ + + ++++ A + F+S M+ S +K E
Sbjct: 225 DNDAEYDCELMVNSISRIEYPELDDEFAKDMEFDSLEDMKAKISDDLKLKIEHSNIDIEN 284
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
I+ + F +P+ + ++ ++ + + + L Y
Sbjct: 285 EAIITKLFADNEFALPKKTLSYLAEEQVKDIKNDNFMQYYYERYYITFAYALLSLY---- 340
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ + IE+T+E + + + + ++
Sbjct: 341 --------ITNNLLRLMPIELTDEMKEEYINHLAIVKDMSSEAYKEKYKDD 383
>gi|13508070|ref|NP_110019.1| trigger factor [Mycoplasma pneumoniae M129]
gi|2499014|sp|P75454|TIG_MYCPN RecName: Full=Trigger factor; Short=TF
gi|1674199|gb|AAB96153.1| trigger factor [Mycoplasma pneumoniae M129]
Length = 444
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 73/427 (17%), Positives = 167/427 (39%), Gaps = 18/427 (4%)
Query: 15 LDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEI 74
L++ I + ++ ++ +D+ IKGFR GKVP + K +E + + +
Sbjct: 18 LEIAIDTKLWKETQQKQTQDLTKNMKIKGFRKGKVPPTLAKDYLD---RAELLQRSAQAV 74
Query: 75 VPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQV 134
+ I + A + + + E I I D + +D++PQ E + ++
Sbjct: 75 IDAIFQPLQQEAVIADNENVIEDFPTIDFKTINEN-DCVILFDFDLVPQFEPPDYKHIKD 133
Query: 135 TQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYTVSVDNVILEDQSKKN 193
I + ++E ++++ I KN ++ D +D+ VD +LE + K
Sbjct: 134 LSPIVPLKDEEFNKELHNIEKNKGKLVDVSDKALANNDIAVIDFVGKVDGKVLESATAKQ 193
Query: 194 VQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPL 253
+ +GS L+G+K GD+++++ FP+D+ ++L GK V + +K +
Sbjct: 194 YELTIGSNSFIDGFESGLIGMKVGDKRQLKLKFPKDYHAEELKGKPVEFDIELKAIKQLE 253
Query: 254 PVVVNNDLAVRLGFESESAMRGLCSQKIKQHS-------EFLVRQKVKRQILDYISNKYT 306
++ L K H E +++ + +++N
Sbjct: 254 ITPMDETNFKEYLPAQYQGFNSLKEFKTYFHKLVSAKKLEITLQENSVKIRQFFLANTTL 313
Query: 307 FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKRRVLTGI 362
+P+SL++ E + +L+ + + + + + E+ Q A+ V +
Sbjct: 314 PYIPDSLIKLESDRLLRAQKDQAEQYKIPFERLLAASKLSLEQLQQRNIKEARDNVTFAL 373
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKY-PNALAELRAPIFEDK 420
V+ I + I+V +++ S + + +P ++ + + I
Sbjct: 374 VMKRIADVEKIKVDNKKIHSEIESIIDVEYPFVNAELKKQMFHNMEQQKDFVESIILNRL 433
Query: 421 VIDHILK 427
I++
Sbjct: 434 TTTKIIE 440
>gi|301633115|gb|ADK86669.1| trigger factor [Mycoplasma pneumoniae FH]
Length = 444
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 73/427 (17%), Positives = 168/427 (39%), Gaps = 18/427 (4%)
Query: 15 LDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEI 74
L++ I + ++ ++ +D+ IKGFR GKVP + K +E + + +
Sbjct: 18 LEIAIDTKLWKETQQKQTQDLTKNMKIKGFRKGKVPPTLAKDYLD---RAELLQRSAQAV 74
Query: 75 VPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQV 134
+ I + A + + + E I I D + +D++PQ E+ + ++
Sbjct: 75 IDAIFQPLQQEAVIADNENVIEDFPTIDFKTINEN-DCVILFDFDLVPQFELPDYKHIKD 133
Query: 135 TQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYTVSVDNVILEDQSKKN 193
I + ++E ++++ I KN ++ D +D+ VD +LE + K
Sbjct: 134 LSPIVPLKDEEFNKELHNIEKNKGKLVDVSDKALANNDIAVIDFVGKVDGKVLESATAKQ 193
Query: 194 VQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPL 253
+ +GS L+G+K GD+++++ FP+D+ ++L GK V + +K +
Sbjct: 194 YELTIGSNSFIDGFESGLIGMKVGDKRQLKLKFPKDYHAEELKGKPVEFDIELKAIKQLE 253
Query: 254 PVVVNNDLAVRLGFESESAMRGLCSQKIKQHS-------EFLVRQKVKRQILDYISNKYT 306
++ L K H E +++ + +++N
Sbjct: 254 ITPMDETNFKEYLPAQYQGFNSLKEFKTYFHKLVSAKKLEITLQENSVKIRQFFLANTTL 313
Query: 307 FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKRRVLTGI 362
+P+SL++ E + +L+ + + + + + E+ Q A+ V +
Sbjct: 314 PYIPDSLIKLESDRLLRAQKDQAEQYKIPFERLLAASKLSLEQLQQRNIKEARDNVTFAL 373
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKY-PNALAELRAPIFEDK 420
V+ I + I+V +++ S + + +P ++ + + I
Sbjct: 374 VMKRIADVEKIKVDNKKIHSEIESIIDVEYPFVNAELKKQMFHNMEQQKDFVESIILNRL 433
Query: 421 VIDHILK 427
I++
Sbjct: 434 TTTKIIE 440
>gi|294155898|ref|YP_003560282.1| trigger factor [Mycoplasma crocodyli MP145]
gi|291600410|gb|ADE19906.1| trigger factor [Mycoplasma crocodyli MP145]
Length = 481
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 66/461 (14%), Positives = 173/461 (37%), Gaps = 29/461 (6%)
Query: 20 PSNRLTDSFNERIEDIRSKANIKGFRPG-KVPLSHIKSLYGKSILSETIDEIIKEIVPEI 78
+ + +I I GFR G +P + ++++ + +
Sbjct: 20 SKEDWSKIISTTRLNIAKTIKIPGFRIGANIPQHVLDKHISNQ-------DVMERGLQQA 72
Query: 79 LSKRDERAAMRPSITINEGESDITSGLIE-GTVDLKLRLSYDILPQIEISSFDDLQVTQD 137
+ E+A + +I+ +L++ + +LP + ++V +
Sbjct: 73 IRANREQAYKLAEKESKNIFYEPHINVIKLSFEELEMEYEFPMLPNFDNLDVKGIKVNSE 132
Query: 138 ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFI 197
+ EK ++ ++ E+A AF+ K+ + +GD V +D+ ++N E + +
Sbjct: 133 FTKFSEKLVENEIHEMAAKFSAFKTKKEAAALGDVVVIDFKGFINNEAFEGGEAEKFELT 192
Query: 198 VGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVV 257
+GS + LVG K G + EI+ FP+ + +K K+ I EV + +
Sbjct: 193 LGSKQFIPGFEDQLVGKKAGWKGEIKVTFPDTYYVKQYRNKETIFEIVIHEVKTKDVPEL 252
Query: 258 NND---LAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLV 314
+ G + ++ +++ + +++ + NK+ + E L
Sbjct: 253 KEEIISTFNLPGVSTMKQLKDYLGASVRRDLIRKAKTSFIDHLIEEVINKFDIKLNEILY 312
Query: 315 ENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEK 370
+ + + + + + + +E+ + A++ V + V+ + +K
Sbjct: 313 TKRVDELNKDFNESLKQNGLKRAEYLEVTKATEEDIMAELRKSAEKEVKSQYVISELFKK 372
Query: 371 NNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ 430
+ E E+++ + ++ + + + +++ + E++ ID LK V
Sbjct: 373 YSTEPKTEDIEKEFDKISKKYNLPVEIVKAQINE-----EVVKSSLQEEQFIDATLKIVN 427
Query: 431 IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+L N +++ + ++ ++ E+A E
Sbjct: 428 P--------ELHKNIEKATKDLDEFEAKGLKEIAKEKAEKE 460
>gi|227872167|ref|ZP_03990536.1| possible peptidylprolyl isomerase [Oribacterium sinus F0268]
gi|227841996|gb|EEJ52257.1| possible peptidylprolyl isomerase [Oribacterium sinus F0268]
Length = 176
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 58/156 (37%), Gaps = 10/156 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M V + E ++ V + + + + + +++ NI GFR GK I+ YG
Sbjct: 30 MSVKVENLEKNMAKITVDVSAEDFAQAVEQAYQKTKTRYNIPGFRKGKATKKMIEQHYGP 89
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ + I+ I+ P + RP I + + I D +
Sbjct: 90 QVFYDAAINNILDTHYPAAAKESGLDIVSRPEIGVEQ---------IGEGKDFIFTATVA 140
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAK 155
+ P++ + + + + V KE+ ++ + +
Sbjct: 141 VRPEVTLGEYFGVTAEKADVSVSAKEVTERLNKELE 176
>gi|255082356|ref|XP_002504164.1| predicted protein [Micromonas sp. RCC299]
gi|226519432|gb|ACO65422.1| predicted protein [Micromonas sp. RCC299]
Length = 511
Score = 107 bits (265), Expect = 6e-21, Method: Composition-based stats.
Identities = 70/471 (14%), Positives = 162/471 (34%), Gaps = 52/471 (11%)
Query: 2 QVIEKFSE--GLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFR-------------- 45
+V K + K L+V +P + +++ +E K I GF
Sbjct: 45 EVTVKQHDLGDCKVRLEVAVPISVQNEAYQACLEGFAEKCQIPGFNYKKGGGRKKGDAKL 104
Query: 46 PGKVPLSHIKSLYGKSILSET-IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITS- 103
P P S I + G + ++E+++ +P + + A++ S I D+
Sbjct: 105 P---PASVIVNFVGAKEFASACVEEVLQMSIPVAM-ETVAATALQDSERIETAFDDLKKA 160
Query: 104 ---GLIEGTVDLKLRLSYDILPQIEIS-SFDDLQVTQDICEVDEKEIDRQMA------EI 153
DL + +++P I+ + + L+VT D + +
Sbjct: 161 FSGSDCAPIGDLTYSIGVEVVPTIKWTGDYRKLKVTVQSPGDDVTDAAEAESIFNAALRN 220
Query: 154 AKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSAD-LFSETTEILV 212
+ E + + +E ++ G+A + +V
Sbjct: 221 LGTMRVVADRGLEVGDQVVMDLSAVNKATGEEIEGIKQEKFNLDTGAARLNLPGLVDGIV 280
Query: 213 GLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SE 270
G+KTG+ +E+ P+D + G + +++E+F + +A ++ + +
Sbjct: 281 GMKTGETREVPITMPDDWPQAFIRGVEATFTVTLRELFQNDVPEATDAVASKIFPDASTI 340
Query: 271 SAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMS 330
+ + K + ++ Q ++D ++ +P S+VE + + EM
Sbjct: 341 DDAKAKILESQKATTAAMLEQATNEALVDALAAICDAPLPASIVEETGRQMYSQKMLEMQ 400
Query: 331 SANQKSQNV------DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSAL 384
+ S V + E+ L+ + V I + NI+V+EEE ++ +
Sbjct: 401 VGSGLSMEVVNQLASPEMVEKFLETDRKEIELVVRRTIACEELFRLENIQVSEEEFKAEV 460
Query: 385 ---YQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
++ R+ + + I K ++ + ++
Sbjct: 461 VAAKEEFERYGTE--------YDVQRLVEQAGEAIEARKSMEWLRAHAEVT 503
>gi|260889844|ref|ZP_05901107.1| trigger factor [Leptotrichia hofstadii F0254]
gi|260860450|gb|EEX74950.1| trigger factor [Leptotrichia hofstadii F0254]
Length = 321
Score = 106 bits (264), Expect = 8e-21, Method: Composition-based stats.
Identities = 60/321 (18%), Positives = 139/321 (43%), Gaps = 9/321 (2%)
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYT 178
+P E+ + ++V ++ E+ +++++ ++ + +N + + E++ D V +++
Sbjct: 1 MPSFELGQYKGVEVEKEKVEITDEKVNEEIERLRENAAKLKEVAENEEAKNDDVVNINFE 60
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+D + + +GS + + G K GD+ ++ FPE++ + L GK
Sbjct: 61 GFIDGKAFDGGKAEGYDLTLGSHSFIDTFEDQIAGHKKGDEFDVNVTFPEEYHAESLKGK 120
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ + +N++LA LGF+S M + I + E + K +++
Sbjct: 121 PALFKVKVNSIKRKEEAELNDNLAKELGFDSVEDMTAKTRENITKREEARAENEFKNKVI 180
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----NQKSQNVDSIDEEDLQYYHMLA 354
D + + +VPE+LV+ E + + + ++ NQ Q E + A
Sbjct: 181 DAVVSGTEVEVPEALVQREIDYQINRFAQQLQMQGINLNQYFQMTGQTIEAMRESSKENA 240
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA---LAE 411
++ V T +VL I + +I+ T+EE+ + + + ++ +K N + E
Sbjct: 241 EKSVKTELVLSEIAKAESIKATDEEVSKEIETLAAMYGLEKDALIADVRKNGNYERFIDE 300
Query: 412 LRAPIFEDKVIDHILKSVQIV 432
+ K ID ++K ++
Sbjct: 301 TNYRLVNQKTIDLLVKEAKVK 321
>gi|83319723|ref|YP_424489.1| trigger factor [Mycoplasma capricolum subsp. capricolum ATCC 27343]
gi|119370907|sp|Q2SRX4|TIG_MYCCT RecName: Full=Trigger factor; Short=TF
gi|83283609|gb|ABC01541.1| trigger factor [Mycoplasma capricolum subsp. capricolum ATCC 27343]
Length = 428
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 73/422 (17%), Positives = 156/422 (36%), Gaps = 16/422 (3%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SIL 63
EK + + + V I + + + +++ + GFR GK P S +
Sbjct: 6 EKLVDQGQGKWTVTIDGEQWIEFLKKAKNRLKANLVVPGFRKGKAPESETAKYLTPIKLY 65
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+E +IK L++ + R S T + +I+ DL L +
Sbjct: 66 NEAFKIVIKPAFDFALTQEN-RIQNDNSPTPVIVKVSEKEIVIDFVFDLVLEVKIGEYKN 124
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
I ++V+Q+ + + + + GD VT D+ VD+
Sbjct: 125 ISTIKKSTVEVSQEDVDNVIDMYRS-----RFAMQKEKEVSDQIQKGDIVTFDFKGYVDD 179
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E K+ +GS + ++GLK G+ +EI FPE++ I LAGK +
Sbjct: 180 QAFEGGEAKDFVLEIGSNQFVPGFEDSMIGLKVGENQEINVKFPEEY-IPSLAGKDAKFV 238
Query: 244 FSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+IK + + +++L + + + + + + + I+D
Sbjct: 239 LNIKNIKEKILPAKDDELVKDLNLPDITTYVQLEEKVKKDVLEQKTKNNKSEFVENIIDE 298
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKR 356
I F +P+++VE + + ++ +++ + EE + A
Sbjct: 299 IIKTSEFQIPKTIVERQLKDVKKEFEDQLTQQKITLEKYKEITKISQEEIDEELKNDAIH 358
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R+ + +V+ I K NI+ +EE + + + + +K + ++ + +
Sbjct: 359 RIKSFLVVSEIKNKENIKASEEAINTKFEEFANLYGIEVEK-IKSLIDNQAIKHQVESEL 417
Query: 417 FE 418
E
Sbjct: 418 LE 419
>gi|168070826|ref|XP_001786953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660089|gb|EDQ48233.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 283
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 116/273 (42%), Gaps = 6/273 (2%)
Query: 163 KETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEI 222
+E ++ GD +D+ D V E ++ +GS + E +VGL G++K+I
Sbjct: 12 EEGAAQNGDLAVIDFEGFQDGVAFEGGKAEDYSLELGSGTFIAGFEEQVVGLNVGEEKDI 71
Query: 223 ERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKI 281
FPE++ +LAGK+ + + V++++ A F++ ++ +K+
Sbjct: 72 TVTFPEEYHSPNLAGKEAVFKVKLTSLKRKNLPVLDDEFAKDVSEFDTLEELKADTKKKL 131
Query: 282 KQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQ 337
++ S Q V+ Q++ + D+P +VE+E + ++ + + Q
Sbjct: 132 EEKSAQDKDQYVREQLVLKAAENAEIDLPAVMVEHELDQMVSEFGQRLQYQGMTLELYFQ 191
Query: 338 NVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK 397
+ + A RV T + L IG+ NIE TEE++ L + G + +
Sbjct: 192 FSGMDESQLRDQLRADATSRVRTSLTLEAIGKAENIEATEEDVNEELNKLAGVYGRPADE 251
Query: 398 MLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ 430
+ + +A L + K +D ++ +
Sbjct: 252 LRK-IFSAQDGMAALYRDVQTRKTVDFLVAESK 283
>gi|15828680|ref|NP_326040.1| trigger factor [Mycoplasma pulmonis UAB CTIP]
gi|21264080|sp|Q98R01|TIG_MYCPU RecName: Full=Trigger factor; Short=TF
gi|14089622|emb|CAC13382.1| TRIGGER FACTOR (PROLYL ISOMERASE) [Mycoplasma pulmonis]
Length = 459
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/434 (18%), Positives = 167/434 (38%), Gaps = 36/434 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPG-------KVPLSH 53
M + E + + + S S + ++SK NI GFR K+ +
Sbjct: 1 MSIKTYDKENSEIHVKTPVESTLWKQSQKKAFNKLKSKINIPGFRKNSSSPQFDKIARAK 60
Query: 54 IKSLYGKSILSETIDEIIKEIVPEILSKRD----ERAAMRPSITINEGESDITSGLIEGT 109
I I ++ IDE + + D ER R + +++ D
Sbjct: 61 ISK---NDIWAKAIDETLNSTFEIARKELDKEDLERILGRANYRVSKITEDEAEIEFF-- 115
Query: 110 VDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI 169
+ + P+IE + +L V +V +K+ID+++ + + E +E+
Sbjct: 116 --------WPVRPEIEDFKYKNLNVKFKEVKVTKKDIDQRIQSLMEMGAPIEESNEPAEL 167
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
+++ D+ +D E S + + +GS + LVGLK GD+KEI+ FP D
Sbjct: 168 ENEMVFDFKGFIDGEEFEGGSAEEFKLKLGSKSFIPGFEDQLVGLKAGDEKEIKVTFPAD 227
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE---SESAMRGLCSQKIKQHSE 286
+ +++ AGK+ + +VF P +N++ LGF+ + ++ I+
Sbjct: 228 YYVEEYAGKESVFKILVHKVFKPKAKEINDETIKELGFKGVSNLEQLKEYLRPSIEHKLL 287
Query: 287 FLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSI 342
+ K + + I +P L+ E I +K + + + +
Sbjct: 288 EDSLTEFKNEAFNKIKELNDIKIPRGLLLEEMTAINEKFNETLKAQGLKRREYLEMTKLS 347
Query: 343 DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF 402
+E+ + A ++ ++ I + N+ ++++ ++ + K+ +
Sbjct: 348 EEKVAEQVKKEAITKINEYLIFEQIKKAENVTISDDIIEDHYNIMAKNYNIEVDKIKEFI 407
Query: 403 -----QKYPNALAE 411
++ PN L E
Sbjct: 408 PVDKLKEDPNLLNE 421
>gi|77409355|ref|ZP_00786056.1| trigger factor [Streptococcus agalactiae COH1]
gi|77172027|gb|EAO75195.1| trigger factor [Streptococcus agalactiae COH1]
Length = 196
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 82/205 (40%), Gaps = 11/205 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + + I + + + ++ ++ N+ GFR G +P + +G+
Sbjct: 1 MSTSFENKATNRGIITFTISQDEIKPALDQAFNKVKKDLNVPGFRKGHMPRTVFNQKFGE 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
L E ++ ++ + +++ +P I + E D KL
Sbjct: 61 EALYENALNLVLPKAYEAAVAELGLDVVAQPKIDVVSM---------EKGQDWKLTAEVV 111
Query: 120 ILPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
P++++ + DL V D EV ++E+D ++ N VK+ E+ GD V +D+
Sbjct: 112 TKPEVKLGDYKDLSVEVDVSKEVSDEEVDAKVERERNNLAELTVKDGEAAQGDTVVIDFV 171
Query: 179 VSVDNVILEDQSKKNVQFIVGSADL 203
SVD V + N +GS
Sbjct: 172 XSVDGVEFDGXKGDNFSLELGSGQF 196
>gi|218459342|ref|ZP_03499433.1| trigger factor [Rhizobium etli Kim 5]
Length = 121
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/122 (45%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKRE+ V+IP+ + D N R+ D++ K I GFRPGKVP +H+K +YGK
Sbjct: 1 MQVIETLAEGLKREIKVVIPAKDMEDKMNARLADVKDKVRINGFRPGKVPAAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
SI++E ++EI++E ILS R E++A +P I + E + D ++ D + LSY++
Sbjct: 61 SIMAELVNEIVREQPSAILSSRGEKSATQPEIAMTE-DKDEADKILSAQQDFEFTLSYEV 119
Query: 121 LP 122
LP
Sbjct: 120 LP 121
>gi|270284871|ref|ZP_06194265.1| trigger factor [Chlamydia muridarum Nigg]
gi|270288898|ref|ZP_06195200.1| trigger factor [Chlamydia muridarum Weiss]
gi|301336250|ref|ZP_07224452.1| trigger factor [Chlamydia muridarum MopnTet14]
Length = 442
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 69/440 (15%), Positives = 162/440 (36%), Gaps = 17/440 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + G V E ++ ++ + GFR GK P + I++ Y
Sbjct: 12 SINIEETAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIIEARYATQ 71
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS-YDI 120
+ E +++ E LS+ +R + P S + S + + +
Sbjct: 72 VEQELRRFLLRASF-EALSQMCDRKPLSPK---AVRSSTVDSCNAADGGVVSFLYEAFPV 127
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+P + +L + + E+ +++++ + +A S+ GD +++ VS
Sbjct: 128 IPSLPW-EQLNLSDPEPVKEISDEDLENGLKNVAYFFATKTPVTRPSQEGDFISLSLHVS 186
Query: 181 VDNVILEDQSK--KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ + +N F + D+ + + TG + E E + S +
Sbjct: 187 KKGDLNSNPVAIFENKYFKISEEDMTDAFKARFLNVSTGHRVEEEIASEDIQSFLN---- 242
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
L F++ V ++++ A +L ES ++ +++ ++ QK
Sbjct: 243 GDLLTFTVNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEEHHQKRFSAAE 302
Query: 299 DYISNKYTFDVPESLVENEYNG-ILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D ++ FD+P+SL++ +K+ ++ + L+ A++
Sbjct: 303 DALAQLIDFDLPQSLLQEREEILSREKLLNARLVKYCSDSELEEQKQTLLEEAKADARKA 362
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPI 416
V + + + + ++ EE+Q + RF H K + + + + R +
Sbjct: 363 VKLLFLTQKVFSEKELSISREELQRMMDVCSRERFGAHPPKDISN-EMLQELVLAARDRL 421
Query: 417 FEDKVIDHILKSVQIVDRKV 436
K I+ I S + D +V
Sbjct: 422 TYHKAIEAI--SAEKKDLEV 439
>gi|313115137|ref|ZP_07800622.1| trigger factor [Faecalibacterium cf. prausnitzii KLE1255]
gi|310622503|gb|EFQ05973.1| trigger factor [Faecalibacterium cf. prausnitzii KLE1255]
Length = 324
Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/321 (15%), Positives = 135/321 (42%), Gaps = 12/321 (3%)
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++ + + L+ T+ + V EK ++ + A + + + F E + G +VT+D+ +
Sbjct: 9 PKVTLGQYKGLEFTRRVRPVSEKAVELEAANLTRTHAPFAPVEKSAARGMRVTLDFEGFM 68
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D + + +NV ++G+ L + + G K G+ + +P + + +L+GK +
Sbjct: 69 DGAPIPESKMENVTVVLGTGQLMPAAEDAVYGHKAGESFRFDFTYPAEFRVPELSGKTAQ 128
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++ V PV +++ A LGF++ A++ +K ++ E + +L
Sbjct: 129 FAITLHTVEQKQPVPLDDAFAKTLGFDTVDALKESIREKKRRSHEANADRIAGAALLGMA 188
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLAKRR 357
T ++ ++++ + + +R + + + + +E + A+R+
Sbjct: 189 GANLTAELDNAILDQNADHDMNALRERLRRSKMTMELYCKAGQTTPDEVRAAFRRDAERK 248
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + + + I + I V+ E+ + + E ++ + + + + +
Sbjct: 249 MRSILAVQAIAKAEQITVSNAEVDAEYVRLSKLHDTPEAEIRNVLSRD-----AVASAVT 303
Query: 418 EDKVIDHILKSVQIV---DRK 435
KV ++ I +++
Sbjct: 304 TQKVQRFLIDHANITSVVEKE 324
>gi|145343762|ref|XP_001416480.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576705|gb|ABO94773.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 533
Score = 103 bits (257), Expect = 5e-20, Method: Composition-based stats.
Identities = 72/464 (15%), Positives = 160/464 (34%), Gaps = 41/464 (8%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGF---RPG-----KVPLSHI 54
V ++ + +L V +P L ++ ++ + GF + G K+P+ +
Sbjct: 70 VDKEDAGDGAVKLTVRVPEALLQKCYDNVVDGFNDTVTVPGFNASKKGSKASTKIPMQLL 129
Query: 55 KSLYGKSILSET-IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLI----EGT 109
+ GK ++E ++ +PE + + A++ S I D+ S
Sbjct: 130 INHVGKKEFQSACVEEALQNSLPEAM-ELVAATALQDSERITTHFMDMFSSFAGVHSAPC 188
Query: 110 VDLKLRLSYDILPQIEIS-SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE 168
D+K + ++ P + + L V D ++
Sbjct: 189 EDMKYEVMVEMEPTVAFTGDHKSLSVKVQSPGDDATAQYDADKFWNDALKDQSTLRVVTD 248
Query: 169 IGDKVTVDYTVSV----------DNVILEDQSKKNVQF-IVGSADLFSETTEILVGLKTG 217
G V + D L+ +K Q G E +VG++ G
Sbjct: 249 RGLVSGDAAVVDIDAVRVNDDGTDGAALQGMQQKAFQLDTDGGNIKLPGLLENIVGMEVG 308
Query: 218 DQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRG 275
D+K E FP D + + K + ++ E+F + LA ++ S + +
Sbjct: 309 DKKSFEIVFPGDWPQEYVRNVKAKFTVTVSELFGREFPKETDALAEKIFPGSTSIADAKA 368
Query: 276 LCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQ------KVRFEM 329
I E+ + + + +D +++ +P+SL+E + + +V+ ++
Sbjct: 369 KILDSITAKYEYDLERAIDEACVDALADICDVKIPKSLIEEQGRNMYSEQLLAMQVKQKL 428
Query: 330 SSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLG 389
+ + + E L +R I + + N+EVT E ALY+++
Sbjct: 429 APKQLEQLASAKMVNEYLTKQKDEIERVCRRTIACEHLAKLENLEVTGE----ALYEEVE 484
Query: 390 RFPGHEKKMLDHFQKYPNALAELRAPIFEDK-VIDHILKSVQIV 432
+ ++ + + L E K + ++ ++
Sbjct: 485 KAKLEFEEFGTEYNENQLYLQA--QDALEGKLAFKWLKENCKVE 526
>gi|15834705|ref|NP_296464.1| trigger factor [Chlamydia muridarum Nigg]
gi|12230732|sp|Q9PLL9|TIG_CHLMU RecName: Full=Trigger factor; Short=TF
gi|7190115|gb|AAF38962.1| trigger factor [Chlamydia muridarum Nigg]
Length = 433
Score = 103 bits (256), Expect = 6e-20, Method: Composition-based stats.
Identities = 68/439 (15%), Positives = 158/439 (35%), Gaps = 15/439 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + G V E ++ ++ + GFR GK P + I++ Y
Sbjct: 3 SINIEETAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIIEARYATQ 62
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E +++ E LS+ +R + P S + S + +
Sbjct: 63 VEQELRRFLLRASF-EALSQMCDRKPLSPK---AVRSSTVDSCNAADGGVVSFLYEAFPV 118
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
+L + + E+ +++++ + +A S+ GD +++ VS
Sbjct: 119 IPSLPWEQLNLSDPEPVKEISDEDLENGLKNVAYFFATKTPVTRPSQEGDFISLSLHVSK 178
Query: 182 DNVILEDQSK--KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + +N F + D+ + + TG + E E + S +
Sbjct: 179 KGDLNSNPVAIFENKYFKISEEDMTDAFKARFLNVSTGHRVEEEIASEDIQSFLN----G 234
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
L F++ V ++++ A +L ES ++ +++ ++ QK D
Sbjct: 235 DLLTFTVNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEEHHQKRFSAAED 294
Query: 300 YISNKYTFDVPESLVENEYNG-ILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
++ FD+P+SL++ +K+ ++ + L+ A++ V
Sbjct: 295 ALAQLIDFDLPQSLLQEREEILSREKLLNARLVKYCSDSELEEQKQTLLEEAKADARKAV 354
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + + + ++ EE+Q + RF H K + + + + R +
Sbjct: 355 KLLFLTQKVFSEKELSISREELQRMMDVCSRERFGAHPPKDISN-EMLQELVLAARDRLT 413
Query: 418 EDKVIDHILKSVQIVDRKV 436
K I+ I S + D +V
Sbjct: 414 YHKAIEAI--SAEKKDLEV 430
>gi|239618301|ref|YP_002941623.1| trigger factor [Kosmotoga olearia TBF 19.5.1]
gi|259533619|sp|C5CGV0|TIG_KOSOT RecName: Full=Trigger factor; Short=TF
gi|239507132|gb|ACR80619.1| trigger factor [Kosmotoga olearia TBF 19.5.1]
Length = 439
Score = 103 bits (255), Expect = 8e-20, Method: Composition-based stats.
Identities = 72/466 (15%), Positives = 176/466 (37%), Gaps = 30/466 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ +E ++ + + ++ NE + + I GFR GK P I++ +G+
Sbjct: 1 MEKNVVKAEKNVEIVEFTFGPDEIAEAENEIVRYVNKNYTIPGFRKGKAPKRIIETFFGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ ++E+ + + L + + + +
Sbjct: 61 NFRDMVLEEL-SRKIEDTLKDEEL------------FIPAVIADRKIEGDVAVFVVELHR 107
Query: 121 LPQIEISSFDDLQVTQD-ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P++E+ + L+++ EV +D ++ E+ E K+ +EIGD + ++YT+
Sbjct: 108 EPKVELKDYTGLELSVPKQEEVLANYVDNKLEELRNEAAIVEPKDGPAEIGDVINIEYTI 167
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D I+ D + + + ++G K GD E +R F + + K
Sbjct: 168 EKDGKIIADHKTQEILIVEDDDRPI---VTNVIGKKKGDIVEFDRTF-------ENSNNK 217
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
IKEV + +N++ A + ++ ++ + E + +++Q+
Sbjct: 218 YHYKIEIKEVLKRTLMELNDEFAKSVASEVNTLEELKKKLEEEGLEAFESWKKDFLRQQV 277
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
D ++ ++ E ++ N ++ + E + + Q +E+ + +
Sbjct: 278 QDKLAELVELEISEKTLDYFVNRAIENAKKENTYDSYLKQ--AGSEEKLYEEFKTGILNE 335
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + I EK IEVT+EE+ + + ++ + + + ++ I
Sbjct: 336 LKKNTAIEKIAEKEQIEVTDEEVMKTAEELSTYWGISPERAKEIVKTREDIRNDIVENIR 395
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETF 463
KV D I++ I ++++ D+ + E ++ +
Sbjct: 396 RTKVQDLIVEKATI--KEISADEPVEEQKEEEEKEEAGSENSENKE 439
>gi|331703452|ref|YP_004400139.1| Trigger factor [Mycoplasma mycoides subsp. capri LC str. 95010]
gi|328802007|emb|CBW54161.1| Trigger factor [Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 428
Score = 103 bits (255), Expect = 9e-20, Method: Composition-based stats.
Identities = 74/425 (17%), Positives = 170/425 (40%), Gaps = 22/425 (5%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SIL 63
EKF + + + V I ++ T+ + +++ + GFR GK P S I
Sbjct: 6 EKFVDQGQGKWTVTIQDDQWTEFLKKAKNRLKANLVVPGFRKGKAPESETAKYLTPIKIY 65
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+E ++K LS+ + I S + ++ + +D++ +
Sbjct: 66 NEAFKIVVKPAFDFALSQEN---------KIQNDNSPTPVIVKVSDKEIVIDFIFDLILE 116
Query: 124 IEISSFDDL-QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYTVS 180
+++ + ++ V + + EV+++++D + + K+T+ +I D VT D+
Sbjct: 117 LKVGEYKNITTVKKPVVEVNQEDVDNVIDMYRSRFAMQKEKQTDDQIQKGDIVTFDFKGY 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD+ E K+ +GS + ++GLK G+ +EI FPE++ I LAGK
Sbjct: 177 VDDQAFEGGEAKDFVLEIGSNQFVPGFEDSMIGLKVGENQEINVKFPEEY-IPSLAGKDA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +IK + + +++L + + + + + + + + I
Sbjct: 236 KFVLNIKNIKEKILPAKDDELVKDLNLPDITTYEQLEQKVKEDVLEQKTKINKSEFVESI 295
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHML 353
+D I F +P++++E + + ++ +++ EE +
Sbjct: 296 IDEIIKNSEFQIPKTIIERQIKDVKKEFEDQLAQQKITLDKYKEITKITQEEIDEELKSD 355
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R+ + +V I K NI +EE + + + + E + + ++
Sbjct: 356 ATHRIKSFLVASEIKNKENIVASEEAINAKFEEFANLYGI-EAEKIKSLIDNQAIKHQVE 414
Query: 414 APIFE 418
+ + E
Sbjct: 415 SELLE 419
>gi|68161011|gb|AAY86937.1| lr0280 [Lactobacillus reuteri]
Length = 331
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 60/333 (18%), Positives = 138/333 (41%), Gaps = 14/333 (4%)
Query: 114 LRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG-DK 172
L D++P++++ + ++V V + ++D + + +KE + D
Sbjct: 2 LTAEVDVMPEVKLGEYKGMEVPAQDTTVTDADVDDALETKRQQQAELVLKEDKPAEKGDT 61
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
V +DY SVD + S +N +GS + L+G + ++ FPED+
Sbjct: 62 VVIDYKGSVDGEEFDGGSAENYSLELGSGSFIPGFEDQLIGHNADEDVDVNVTFPEDYHA 121
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVR 290
K+LAGK I E+ +++D A ++ + ++ +++++ + +
Sbjct: 122 KNLAGKDALFKVKIHEIKEKQLPELDDDFAKDVDEDVDTLAELKEKTKKQLQEEKDNQAK 181
Query: 291 QKVKRQILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEE 345
++ ++ D+P+++++++ N +Q+ M Q +E+
Sbjct: 182 AAIEDAAINKAVANAEIQDIPQAMLDDDTNRQMQQYLAGMQQQGISPQMYFQITGTKEED 241
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ + A +RV T +VL I + N++ T+EE+ + ++ E + K
Sbjct: 242 LKKQFANDAAQRVKTNLVLEAIVDDANLDATDEEIAKEISDLAKQYGMEEDAVKKALSKD 301
Query: 406 PNALAELRAPIFEDKVIDHILKSVQ-IVDRKVT 437
L I K +D + S + + D + +
Sbjct: 302 -----MLMHDIKIRKAVDLVADSAKQVKDDEKS 329
>gi|332299967|ref|YP_004441888.1| trigger factor domain-containing protein [Porphyromonas
asaccharolytica DSM 20707]
gi|332177030|gb|AEE12720.1| trigger factor domain-containing protein [Porphyromonas
asaccharolytica DSM 20707]
Length = 480
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/465 (12%), Positives = 164/465 (35%), Gaps = 21/465 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + E + L++ + S+ + + ++++ +R A GFRPGK P + I+ YG+
Sbjct: 1 MNISHELKED-QVLLNITLTSDEIKEQVTDQLKHLRKTAETPGFRPGKTPAALIEKKYGQ 59
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + L ++ + + ++ + D +L++S +
Sbjct: 60 AVRFSVVSKATSNEAVSYLKEQGIKTIGGFLMEQDD------NSYTPEQTDYQLQVSTGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LPQ + ++ + +VD+ EID+ ++ ++ E E +
Sbjct: 114 LPQFPETIDSNVTLPYYTVQVDDAEIDQMISNAQESAGERNEVEDVQEKDVLYVSVQELD 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ F++ E ++ GD I+ D S ++A
Sbjct: 174 DKGEHASEGIALEESFLMPQYVTNEEIRAEILKAHKGDTLTIDLQKAYDGSEVEIASFLQ 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+K+ + + +N L E + + + +E +R ++KR
Sbjct: 234 IKQEEVKDHTNAFEIKINRILRNTPHAIDEKLFKLMLGPTTEVTNEEELRAELKRMQESR 293
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
++ + + I + A ++ + +E+ V
Sbjct: 294 NASMANDIFTTVVSKYVVEKIQGLPFSDKHLALLLNEKTEEETQEEYDERINQVMPYVRY 353
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQ------QLGRFPG--HEKKMLDHF-----QKYPN 407
++ + ++ +EV++ ++ + + Q ++ ++ +
Sbjct: 354 QCMVADLNKQLGVEVSDGLVRKIVREGVMRQVQAAGLGQLLSNDDFIESLVNNAMEQNND 413
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRK-VTFDQLFDNSSESSPE 451
L + E + + + V + +++ ++ ++L+ ++ E
Sbjct: 414 QLFAAKEQAKEQALAAKVKELVTLDEQEPLSVEELYKIHTKLQRE 458
>gi|313886888|ref|ZP_07820592.1| putative trigger factor [Porphyromonas asaccharolytica PR426713P-I]
gi|312923685|gb|EFR34490.1| putative trigger factor [Porphyromonas asaccharolytica PR426713P-I]
Length = 480
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/465 (12%), Positives = 162/465 (34%), Gaps = 21/465 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + +G + L++ + S+ + + ++++ +R A GFRPGK P + I+ YG+
Sbjct: 1 MNISHE-LKGDQVLLNITLTSDEIKEQVTDQLKHLRKTAETPGFRPGKTPAALIEKKYGQ 59
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ + + L ++ + + D +L++S +
Sbjct: 60 AVRFSVVSKATSNEAISYLKEQGIKTIG------GLLMEQDDNSYTPEQTDYQLQVSTGL 113
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
LPQ + ++ + +VD+ EID+ ++ ++ E E +
Sbjct: 114 LPQFPETIDSNVTLPYYTVQVDDAEIDQMISNAQESAGERNEVEDVQEKDVLYVSVQELD 173
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ F++ E ++ GD I+ D S ++A
Sbjct: 174 DKGEHASEGIALEESFLMPQYVTNEEIRAEILKAHKGDTLTIDLQKAYDGSEVEIASFLQ 233
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+K+ + + +N L E + + + +E +R ++KR
Sbjct: 234 IKQEEVKDHTNAFEIKINRILRNTPHAIDEKLFKLMLGPTTEVTNEEELRAELKRMQESR 293
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
++ + + I + A ++ + +E+ V
Sbjct: 294 NASMANDIFTTVVSKYVVEKIQGLPFSDKHLALLLNEKTEEETQEEYDERINQVMPYVRY 353
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQ------QLGRFPG--HEKKMLDHF-----QKYPN 407
++ + ++ +EV++ ++ + + Q ++ ++ +
Sbjct: 354 QCMVADLNKQLGVEVSDGLVRKIVREGVMRQVQAAGLGQLLSNDDFIESLVNNAMEQNND 413
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRK-VTFDQLFDNSSESSPE 451
L + E + + + V + +++ ++ ++L+ ++ E
Sbjct: 414 QLFAAKEQAKEQALAAKVKELVTLDEQEPLSVEELYKIHTKLQRE 458
>gi|42560988|ref|NP_975439.1| FKBP-type peptidyl-prolyl isomerase [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|67461782|sp|Q6MTF5|TIG_MYCMS RecName: Full=Trigger factor; Short=TF
gi|42492485|emb|CAE77081.1| FKBP-type peptidyl-prolyl isomerase [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|301320978|gb|ADK69621.1| trigger factor [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 428
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 73/425 (17%), Positives = 168/425 (39%), Gaps = 22/425 (5%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SIL 63
EKF + + + V I ++ T+ + +++ + GFR GK P S I
Sbjct: 6 EKFVDQGQGKWTVTIQDDQWTEFLKKAKNRLKTNLVVPGFRKGKAPESETAKYLTPIKIY 65
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+E ++K LS+ + I S + ++ + +D++ +
Sbjct: 66 NEAFKIVVKPAFDFALSQEN---------KIQNDNSPTPVIVKVSDKEIVIDFIFDLVLE 116
Query: 124 IEISSFDDL-QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYTVS 180
+++ + ++ V + + EV+++++D + + K+ + +I D VT D+
Sbjct: 117 LKVGEYKNITTVKKPVVEVNQEDVDNVIDMYRSRFAMQKEKQADDQIQKGDIVTFDFKGY 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD+ E K+ +GS + ++GLK G+ +EI FPE++ I LAGK
Sbjct: 177 VDDQAFEGGEAKDFVLEIGSNQFVPGFEDSMIGLKVGENQEINVKFPEEY-IPSLAGKDA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +IK + + +++L + + + + + + + + I
Sbjct: 236 KFVLNIKNIKEKILPAKDDELVKDLNLPDITTYEQLEQKVKEDVLEQKTKISKSEFVENI 295
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHML 353
+D I F +P++++E + + ++ +++ EE +
Sbjct: 296 IDEIIKTSEFQIPKTIIERQIKDVKKEFEDQLAQQKITLDKYKEITKITQEEIDEELKSD 355
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R+ + +V I K NI +EE + + + + K + ++
Sbjct: 356 AIHRIKSFLVASEIKNKENIVASEEAINAKFEEFANLYGIEADK-IKSLIDNQAIKHQVE 414
Query: 414 APIFE 418
+ + E
Sbjct: 415 SELLE 419
>gi|256384284|gb|ACU78854.1| trigger factor [Mycoplasma mycoides subsp. capri str. GM12]
gi|256385117|gb|ACU79686.1| trigger factor [Mycoplasma mycoides subsp. capri str. GM12]
gi|296455287|gb|ADH21522.1| trigger factor [synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 428
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 74/425 (17%), Positives = 169/425 (39%), Gaps = 22/425 (5%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SIL 63
EKF + + + V I ++ T+ + +++ + GFR GK P S I
Sbjct: 6 EKFVDQGQGKWTVTIQDDQWTEFLKKAKNRLKANLVVPGFRKGKAPESETAKYLTPIKIY 65
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
+E ++K LS+ + I S + ++ + +D++ +
Sbjct: 66 NEAFKIVVKPAFDFALSQEN---------KIQNDNSPTPVIVKVSDKEIVIDFIFDLVLE 116
Query: 124 IEISSFDDL-QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG--DKVTVDYTVS 180
+++ + ++ V + + EV+++++D + + K+ + +I D VT D+
Sbjct: 117 LKVGEYKNITTVKKPVVEVNQEDVDNVIDMYRSRFAMQKEKQADDQIQKGDIVTFDFKGY 176
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
VD+ E K+ +GS + ++GLK G+ +EI FPE++ I LAGK
Sbjct: 177 VDDQAFEGGEAKDFVLEIGSNQFVPGFEDSMIGLKVGENQEINVKFPEEY-IPSLAGKDA 235
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ +IK + + +++L + + Q + + + + + I
Sbjct: 236 KFVLNIKNIKEKILPAKDDELVKDLNLPDITTYEQLEQKVKQDVLEQKTKISKSEFVESI 295
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHML 353
+D I F +P++++E + + ++ +++ EE +
Sbjct: 296 IDEIIKNSEFQIPKTIIERQIKDVKKEFEDQLAQQKITLDKYKEITKITQEEIDEELKSD 355
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A R+ + +V I K NI +EE + + + + E + + ++
Sbjct: 356 ATHRIKSFLVASEIKNKENIVASEEAINAKFEEFANLYGI-EAEKIKSLIDNQAIKHQVE 414
Query: 414 APIFE 418
+ + E
Sbjct: 415 SELLE 419
>gi|295102444|emb|CBK99989.1| trigger factor [Faecalibacterium prausnitzii L2-6]
Length = 325
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/318 (17%), Positives = 131/318 (41%), Gaps = 9/318 (2%)
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++++ + L VT+ + V +K +D ++ A+ + + ++ G + +D+ +
Sbjct: 7 PEVKLGQYKGLAVTRHVRPVTDKTVDIELVHQARMHAVYHPTTEPAKRGFRALLDFAGYM 66
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D + D + V ++G L + + G + G+ + +P+D + +L+GK +
Sbjct: 67 DGREIPDSRMEKVMVVLGDGKLMPAAEQAIYGHRAGEVFRFDFTYPQDFRLPELSGKTAQ 126
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
++ + + + A LGF+S A++ K ++ E + +Q+LD
Sbjct: 127 FEIELRSLAEKITPAPDEAFAKSLGFDSLDALKADLRAKKQKIHEEGADRAAGKQLLDMA 186
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLAKRR 357
T D+P +++ ++ ++ +S + Q +N + E + Y A+ R
Sbjct: 187 GANMTVDLPAEILDRTAQNEMKLLKERLSRSGITLEQHCKNSRTTPEALEKDYRAQAESR 246
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + I E NI V EE+ + + E ++ + + A +
Sbjct: 247 IRFVLAAKAIAEAENIVVHPEEVNAEYRRLSQLQDTPEAEIRKALPED-----TIAAALA 301
Query: 418 EDKVIDHILKSVQIVDRK 435
KV +L + Q+
Sbjct: 302 AKKVQRFLLDNAQVTTVT 319
>gi|9758119|dbj|BAB08591.1| trigger factor-like protein [Arabidopsis thaliana]
Length = 577
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 76/484 (15%), Positives = 168/484 (34%), Gaps = 62/484 (12%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPG-KVPLSHIKSLYGK 60
+V E +L V +P D + + + + + GFRP +VP + I G+
Sbjct: 97 KVTETVQANSSVKLSVEVPEIVCEDCYQRVLTEFMKLSKVPGFRPKTRVPENIIVGFVGR 156
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+L T++ I+K +P + R A++ SI I D+ L + D
Sbjct: 157 QYVLRATVESILKRTLPHAMESVTGR-ALKDSIQIVSSFPDMEKA-YSKLKTLSYEVVVD 214
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
++P+++ + D + + + E+ ++ ++ E + + + V
Sbjct: 215 VVPELKWNPEDGYKNMKVVVELGDEIDAKKACERQLRQKYKSLGALKIVTERGLQVGDLA 274
Query: 180 SVD------------NVILEDQSKKNVQFIVGSA-DLFSETTEILVGLKTGDQKEIERFF 226
VD + D K F L + ++G++ G+ K F
Sbjct: 275 VVDISATTIDEDGSTGQAIPDAESKGFHFDTEEGNRLLPGFLDAIIGIRAGESKSFTLVF 334
Query: 227 PEDHSIKDLAGKKVRL------------------------------NFSIKEVFSPLPVV 256
PE + L G++ + KE+F
Sbjct: 335 PESWKQESLRGQRAQFTVSSSFYIPNIEKDDYKEIIFGTANCVCFLKVDCKELFYRDLPT 394
Query: 257 VNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLV 314
+++ LA + G + + +++ ++ + Q IL+ I ++P+SL
Sbjct: 395 LDDSLADKLLPGCTTLKEVEETLAKRCQEMEQEAKEQATDNAILEQIRKMVEVEIPQSLF 454
Query: 315 ENEYNGILQKVRFEMSSANQKSQNV------DSIDEEDLQYYHMLAKRRVLTGIVLGTIG 368
E + E+ + +++ E L+ + I +G I
Sbjct: 455 EEQGRQFYGARLLEIQGNMKLNEDQLASLSSQKAVNEFLETQRESITNIIKQNIAVGDIF 514
Query: 369 EKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED-KVIDHILK 427
++ N+E + +E+ + + F H+++ + + I E KV++ +
Sbjct: 515 KRENLEFSTDELVKEVENSISEFKKHKQEF------DEERVKDQVQEILEGAKVLEWLKD 568
Query: 428 SVQI 431
+I
Sbjct: 569 RAEI 572
>gi|76789447|ref|YP_328533.1| trigger factor [Chlamydia trachomatis A/HAR-13]
gi|237805058|ref|YP_002889212.1| trigger factor [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311536|ref|ZP_05354106.1| trigger factor [Chlamydia trachomatis 6276]
gi|255317837|ref|ZP_05359083.1| trigger factor [Chlamydia trachomatis 6276s]
gi|255349099|ref|ZP_05381106.1| trigger factor [Chlamydia trachomatis 70]
gi|255503636|ref|ZP_05382026.1| trigger factor [Chlamydia trachomatis 70s]
gi|119370888|sp|Q3KKY7|TIG_CHLTA RecName: Full=Trigger factor; Short=TF
gi|76167977|gb|AAX50985.1| trigger factor, ppiase [Chlamydia trachomatis A/HAR-13]
gi|231273358|emb|CAX10273.1| trigger factor (chaperone) [Chlamydia trachomatis B/TZ1A828/OT]
gi|289525751|emb|CBJ15232.1| trigger factor (chaperone) [Chlamydia trachomatis Sweden2]
gi|296435323|gb|ADH17501.1| trigger factor [Chlamydia trachomatis E/150]
gi|296439040|gb|ADH21193.1| trigger factor [Chlamydia trachomatis E/11023]
Length = 442
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 69/433 (15%), Positives = 158/433 (36%), Gaps = 13/433 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + G V E ++ ++ + GFR GK P + ++S Y
Sbjct: 12 SINIEENAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIVESRYSTQ 71
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E + + E LS+ +R + P + D + + G+V + ++
Sbjct: 72 VEQE-LRRLFLRASFEALSQMCDRKPLSPK-AVRSSAIDTCNPVNGGSVSFLYEA-FPVI 128
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P + L + + E+ E++++ + +A S+ GD +++ VS
Sbjct: 129 PSLPW-EQLSLPDPEPVKEISEEDLENGLKNVAYFFATKTPVTRPSQEGDFISLSLYVSK 187
Query: 182 DNVILEDQSK--KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+N F + D+ + + TG + E E + S +
Sbjct: 188 RGDENSTPVAIFENKYFKISEEDMTDSFKARFLNVSTGHRVEEEIGSEDIQSFLN----G 243
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
L F++ V ++++ A +L ES ++ +++ ++ QK D
Sbjct: 244 DLLTFTVNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEAQHQKRFSDAED 303
Query: 300 YISNKYTFDVPESLVENEYN-GILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
++ FD+PESL++ +K+ ++ + L+ A++ V
Sbjct: 304 ALAQLIDFDLPESLLQEREELLSREKLLNARLVKYCSDSELEEQKQALLEEAKADARKAV 363
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + + + ++ EE+Q + RF G+ K + + + + R +
Sbjct: 364 KLLFLTQKVFSEKGLSISREELQYMMDVCSRERFGGYPPKDISN-EMIQELVLVARDRLT 422
Query: 418 EDKVIDHILKSVQ 430
K I+ I +
Sbjct: 423 YRKAIEAISSEKK 435
>gi|255507315|ref|ZP_05382954.1| trigger factor [Chlamydia trachomatis D(s)2923]
Length = 442
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 69/433 (15%), Positives = 158/433 (36%), Gaps = 13/433 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + G V E ++ ++ + GFR GK P + ++S Y
Sbjct: 12 SINIEENAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIVESRYSTQ 71
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E + + E LS+ +R + P + D + + G+V + ++
Sbjct: 72 VEQE-LRRLFLRASFEALSQMCDRKPLSPK-AVRSSAIDTCNPVNGGSVSFLYEA-FPVI 128
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P + L + + E+ E++++ + +A S+ GD +++ VS
Sbjct: 129 PSLPW-EQLSLPDPEPVKEISEEDLENGLKNVAYFFATKTPVTRPSQEGDFISLSLYVSK 187
Query: 182 DNVILEDQSK--KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+N F + D+ + + TG + E E + S +
Sbjct: 188 RGDENSTPVAIFENKYFKISEEDMTDSFKARFLNVSTGHRVEEEIGSEDIQSFLN----G 243
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
L F++ V ++++ A +L ES ++ +++ ++ QK D
Sbjct: 244 DLLTFTVNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEAQHQKRFSDAED 303
Query: 300 YISNKYTFDVPESLVENEYN-GILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
++ FD+PESL++ +K+ ++ + L+ A++ V
Sbjct: 304 ALAQLIDFDLPESLLQEREELLSREKLLNARLVKYCSDSELEEQKQALLEEAKADARKAV 363
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + + + ++ EE+Q + RF G+ K + + + + R +
Sbjct: 364 KLLFLTQKVFSEKGLSISREELQYMMNVCSRERFGGYPPKDISN-EMIQELVLVARDRLT 422
Query: 418 EDKVIDHILKSVQ 430
K I+ I +
Sbjct: 423 YRKAIEAISSEKK 435
>gi|254492574|ref|ZP_05105746.1| Bacterial trigger factor protein [Methylophaga thiooxidans DMS010]
gi|224462466|gb|EEF78743.1| Bacterial trigger factor protein [Methylophaga thiooxydans DMS010]
Length = 103
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQV + L R + V + + + ER++ IR + GFRPGKVP+ + +G
Sbjct: 1 MQVTVENVSELGRRMTVTVEDANIEQAVQERLKSIRPSVKMAGFRPGKVPMKMVAQSHGP 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESD 100
S E ID I+++ + E ++ A P I + E +
Sbjct: 61 SARREVIDTIVQDSMREAFTQEGVNPAGPPHIDSMDEEGE 100
>gi|296436251|gb|ADH18425.1| trigger factor [Chlamydia trachomatis G/9768]
gi|296438111|gb|ADH20272.1| trigger factor [Chlamydia trachomatis G/11074]
gi|297140612|gb|ADH97370.1| trigger factor [Chlamydia trachomatis G/9301]
Length = 442
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 69/433 (15%), Positives = 158/433 (36%), Gaps = 13/433 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + G V E ++ ++ + GFR GK P + ++S Y
Sbjct: 12 SINIEENAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIVESRYSTQ 71
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E + + E LS+ +R + P + D + + G+V + ++
Sbjct: 72 VEQE-LRRLFLRASFEALSQMCDRKPLSPK-AVRSSAIDTCNPVNGGSVSFLYEA-FPVI 128
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P + L + + E+ E++++ + +A S+ GD +++ VS
Sbjct: 129 PSLPW-EQLSLPDPEPVKEISEEDLENGLKNVAYFFATKTPVTRPSQEGDFISLSLYVSK 187
Query: 182 DNVILEDQSK--KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+N F + D+ + + TG + E E + S +
Sbjct: 188 RGDENSTPVAIFENKYFKISEEDMTDSFKARFLNVSTGHRVEEEIGSEDIQSFLN----G 243
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
L F++ V ++++ A +L ES ++ +++ ++ QK D
Sbjct: 244 DLLTFTVNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEAQHQKRFSDAED 303
Query: 300 YISNKYTFDVPESLVENEYN-GILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
++ FD+PESL++ +K+ ++ + L+ A++ V
Sbjct: 304 ALAQLIDFDLPESLLQEREELLSREKLLNARLVKYCSDSELEEQKQALLEEAKADARKAV 363
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + + + ++ EE+Q + RF G+ K + + + + R +
Sbjct: 364 KLLFLTQKVFSEKGLSISREELQYMMDICSRERFGGYPPKDISN-EMIQELVLVARDRLT 422
Query: 418 EDKVIDHILKSVQ 430
K I+ I +
Sbjct: 423 YRKAIEAISSEKK 435
>gi|237803137|ref|YP_002888331.1| trigger factor [Chlamydia trachomatis B/Jali20/OT]
gi|231274371|emb|CAX11166.1| trigger factor (chaperone) [Chlamydia trachomatis B/Jali20/OT]
Length = 442
Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats.
Identities = 69/433 (15%), Positives = 158/433 (36%), Gaps = 13/433 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + G V E ++ ++ + GFR GK P + ++S Y
Sbjct: 12 SINIEENAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIVESRYSTQ 71
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E + + E LS+ +R + P + D + + G+V + ++
Sbjct: 72 VEQE-LRRLFLRASFEALSQMCDRKPLSPK-AVRSSAIDTCNPVNGGSVSFLYEA-FPVI 128
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P + L + + E+ E++++ + +A S+ GD +++ VS
Sbjct: 129 PSLPW-EQLSLPDPEPVKEISEEDLENGLKNVAYFFATKTPVTRPSQEGDFISLSLYVSK 187
Query: 182 DNVILEDQSK--KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+N F + D+ + + TG + E E + S +
Sbjct: 188 RGDENSTPVAIFENKYFKISEEDMTDSFKARFLNVSTGHRVEEEIGSEDIQSFLN----G 243
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
L F++ V ++++ A +L ES ++ +++ ++ QK D
Sbjct: 244 DLLTFTVNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEAQHQKRFSDAED 303
Query: 300 YISNKYTFDVPESLVENEYN-GILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
++ FD+PESL++ +K+ ++ + L+ A++ V
Sbjct: 304 ALAQLIDFDLPESLLQEREELLSREKLLNARLVKYCSDSELEEQKQALLEEAKADARKAV 363
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + + + ++ EE+Q + RF G+ K + + + + R +
Sbjct: 364 KLLFLTQKVFSEKGLSISREELQYMMDVCSRERFGGYPPKDISN-EMIQELVLVARDRLT 422
Query: 418 EDKVIDHILKSVQ 430
K I+ I +
Sbjct: 423 YRKAIEAISSEKK 435
>gi|166154049|ref|YP_001654167.1| trigger factor [Chlamydia trachomatis 434/Bu]
gi|166154924|ref|YP_001653179.1| trigger factor [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|301335250|ref|ZP_07223494.1| trigger factor [Chlamydia trachomatis L2tet1]
gi|226738675|sp|B0B8T3|TIG_CHLT2 RecName: Full=Trigger factor; Short=TF
gi|226738676|sp|B0BAG2|TIG_CHLTB RecName: Full=Trigger factor; Short=TF
gi|165930037|emb|CAP03520.1| trigger factor (chaperone) [Chlamydia trachomatis 434/Bu]
gi|165930912|emb|CAP06474.1| trigger factor (chaperone) [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 442
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 69/433 (15%), Positives = 156/433 (36%), Gaps = 13/433 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + G V E ++ ++ + GFR GK P + ++S Y
Sbjct: 12 SINIEENAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIVESRYSTQ 71
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E + + E LS+ +R + P + D + + G+V + ++
Sbjct: 72 VEQE-LRRLFLRASFEALSQMCDRKPLSPK-AVRSSAIDTCNPVNGGSVSFLYEA-FPVI 128
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P + L + + E+ E++++ + +A S+ GD +++ VS
Sbjct: 129 PSLPW-EQLSLPDPEPVKEISEEDLENGLKNVAYFFATKTPVTRPSQEGDFISLSLYVSK 187
Query: 182 DNVILEDQSK--KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+N F + D+ + + TG + E E + S +
Sbjct: 188 RGDENSTPVAIFENKYFKISEEDMTDSFKARFLNVSTGHRVEEEIGSEDIQSFLN----G 243
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
L F++ V ++++ A L ES ++ +++ ++ QK D
Sbjct: 244 DLLTFTVNAVIEISSPEMDDEKARELQAESLEDLKKKLRIQLENQAKEAQHQKRFSDAED 303
Query: 300 YISNKYTFDVPESLVENEYN-GILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
++ FD+PESL+ +K+ ++ + L+ A++ V
Sbjct: 304 ALAQLIDFDLPESLLREREELLSREKLLNARLVKYCSDSELEEQKQALLEEAKADARKAV 363
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + + + ++ EE+Q + RF G+ K + + + + R +
Sbjct: 364 KLLFLTQKVFSEKGLSISREELQYMMDVCSRERFGGYPPKDISN-EMIQELVLVARDRLT 422
Query: 418 EDKVIDHILKSVQ 430
K I+ I +
Sbjct: 423 YRKAIEAISSEKK 435
>gi|291527700|emb|CBK93286.1| trigger factor [Eubacterium rectale M104/1]
Length = 319
Score = 101 bits (250), Expect = 4e-19, Method: Composition-based stats.
Identities = 64/321 (19%), Positives = 124/321 (38%), Gaps = 12/321 (3%)
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
I + ++ L+ E++++ Q+A + N E K +GD +DY
Sbjct: 1 MDIVLGNYKGLKANIPYIAYTEEDVNSQIATLLSGNPVREQKTGPLAMGDTAVIDYEGFK 60
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V E + +GS E LVG++ G+ ++I FPE + +LAGK V
Sbjct: 61 DGVAFEGGKAEKYPLGIGSGSFIPGFEEQLVGMEIGEDRDINLSFPEQYHAPELAGKAVV 120
Query: 242 LNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ E+++ +N++ A +S ++ ++ ++ E + ++
Sbjct: 121 FKVKLHEIYNEKEAELNDEFAASLNFPEVQSVEDLKKYINEYLEYQVEARKADVAREKLY 180
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLA 354
D I + VP VE N LQ++ + Q Q + +A
Sbjct: 181 DQILESSSCLVPPQAVETAVNMQLQQMAASFAQQGVAMEQYLQMTGKTMDSLKDELKPVA 240
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+++V VL I NI V++EEM ++ + K A+L+
Sbjct: 241 QKQVKLEAVLDEIIRVENITVSDEEMDEQYELISQKYGQPVDVVKQVLPK-----AQLKP 295
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
+ K I+ + +I+ +
Sbjct: 296 DLLRMKASQLIIDAAEIIMEE 316
>gi|12045093|ref|NP_072904.1| trigger factor [Mycoplasma genitalium G37]
gi|255660239|ref|ZP_05405648.1| trigger factor [Mycoplasma genitalium G37]
gi|1351249|sp|P47480|TIG_MYCGE RecName: Full=Trigger factor; Short=TF
gi|3844842|gb|AAC71459.1| trigger factor [Mycoplasma genitalium G37]
gi|166079084|gb|ABY79702.1| trigger factor [synthetic Mycoplasma genitalium JCVI-1.0]
Length = 444
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 73/418 (17%), Positives = 161/418 (38%), Gaps = 21/418 (5%)
Query: 15 LDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEI 74
L+V I N + + + ++ IKGFRPGK+P + K+ E + + + +
Sbjct: 18 LEVEIDPNYWQATQKKLVGEMAKSIKIKGFRPGKIPPNLASQSINKA---ELMQKSAQNV 74
Query: 75 VPEILS--KRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDL 132
+ I +++E A ++ + D + + V L +D++P ++ + +
Sbjct: 75 MNSIYESVQQEEIVASNDNVIDDYPTIDFKTITEQNCVLLFY---FDLIPNFQLPDYKKI 131
Query: 133 QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVDYTVSVDNVILEDQSK 191
+ + ++ E E + ++ ++AK + GD +D+T VDN L S
Sbjct: 132 KDLTPLTKLTEAEFNNEIEKLAKTKSTMVDVSDKKLANGDIAIIDFTGIVDNKKLASASA 191
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+N + +GS L+ +K +K + FP D+ +K+L K V +K +
Sbjct: 192 QNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSDYHVKELQSKPVTFEVVLKAIKK 251
Query: 252 PLPVVVNNDLAVRLGFESESA------MRGLCSQKIKQHSEFLVRQKVKRQILDYIS-NK 304
++ E + + + ++ + + Q+ ++I ++ N
Sbjct: 252 LEFTPMDETNFKSFLPEQFQSFTSLKAFKSYFHKLMENKKQETILQENNQKIRQFLLTNT 311
Query: 305 YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE----EDLQYYHMLAKRRVLT 360
+PE+L++ E N +L+ + + + + S E AK V
Sbjct: 312 KLPFLPEALIKLEANRLLKLQQSQAEQYKIPFEKLLSASNITLTELQDRNIKEAKENVTF 371
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQ-QLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+V+ I + I+V ++++ + +P +M E I
Sbjct: 372 ALVMKKIADIEKIKVDNNKIKAEIENVIAVEYPFASDEMKKQLFFNMEQQKEFVESII 429
>gi|291524273|emb|CBK89860.1| trigger factor [Eubacterium rectale DSM 17629]
Length = 319
Score = 100 bits (249), Expect = 4e-19, Method: Composition-based stats.
Identities = 63/321 (19%), Positives = 123/321 (38%), Gaps = 12/321 (3%)
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
I + ++ L+ E++++ Q+A + N E K +GD +DY
Sbjct: 1 MDIVLGNYKGLKANIPYIAYTEEDVNSQIATLLSGNPVREQKTGPLAMGDTAVIDYEGFK 60
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V E + +GS E LVG++ G+ ++I FPE + +LAGK V
Sbjct: 61 DGVAFEGGKAEKYPLGIGSGSFIPGFEEQLVGMEIGEDRDINLSFPEQYHAPELAGKAVV 120
Query: 242 LNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ E+++ +N++ A +S ++ ++ ++ E + ++
Sbjct: 121 FKVKLHEIYNEKEAELNDEFAASLNFPEVQSVEDLKKYINEYLEYQVEARKADAAREKLY 180
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLA 354
D I + V VE N LQ++ + Q Q + +A
Sbjct: 181 DQILESSSCLVSPQAVETAVNMQLQQMAASFAQQGVAMEQYLQMTGKTMDSLKDELKPVA 240
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+++V VL I NI V++EEM ++ + K A+L+
Sbjct: 241 QKQVKLEAVLDEIIRVENITVSDEEMDEQYELISQKYGQPVDVVKQVLPK-----AQLKP 295
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
+ K I+ + +I+ +
Sbjct: 296 DLLRMKASQLIIDAAEIIMEE 316
>gi|257439253|ref|ZP_05615008.1| trigger factor [Faecalibacterium prausnitzii A2-165]
gi|257198295|gb|EEU96579.1| trigger factor [Faecalibacterium prausnitzii A2-165]
Length = 326
Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats.
Identities = 57/315 (18%), Positives = 126/315 (40%), Gaps = 9/315 (2%)
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P++++ + L VT+ + + EK ID++M + + ++ G +V +D+ +
Sbjct: 9 PEVKLGQYKGLAVTRHVRPLSEKTIDQEMVHQTRMRSVYHNSTAPAKRGSRVLLDFVGFM 68
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D + D + V ++G L + + G G+ + +PE +++L+GK +
Sbjct: 69 DGEEIPDSRMEKVMVVLGDGKLMPAAEDAIYGHTAGETFRFDFTYPEQFRVEELSGKTAQ 128
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
+ V +N + A G+ +AMR K ++ E + +++L
Sbjct: 129 FEIKLHSVAEKTTPELNEEFARAQGYADLAAMREAVRAKKRKIHEDAADRAAGQELLAKA 188
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLAKRR 357
T D+PE++++ + ++ + +S +N +N + Y A+R
Sbjct: 189 GANLTVDLPEAMLDRTADNEMRMLEQRLSRSNITLEKHCKNSHTTAAALRAGYRDAAERN 248
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + + +I E NI V+ E+ + + E + L A +
Sbjct: 249 LRSMLASRSIAEAENITVSTLEVNNEYRRLSQLQDTPEADIRRVLSPD-----TLAAALV 303
Query: 418 EDKVIDHILKSVQIV 432
KV +L + I
Sbjct: 304 AQKVQRFLLDNADIT 318
>gi|15605440|ref|NP_220226.1| trigger factor [Chlamydia trachomatis D/UW-3/CX]
gi|12230725|sp|O84713|TIG_CHLTR RecName: Full=Trigger factor; Short=TF
gi|3329162|gb|AAC68302.1| Trigger Factor-peptidyl prolyl isomerase [Chlamydia trachomatis
D/UW-3/CX]
gi|296437180|gb|ADH19350.1| trigger factor [Chlamydia trachomatis G/11222]
gi|297748838|gb|ADI51384.1| Trigger factor, ppiase [Chlamydia trachomatis D-EC]
gi|297749718|gb|ADI52396.1| Trigger factor, ppiase [Chlamydia trachomatis D-LC]
Length = 442
Score = 100 bits (247), Expect = 7e-19, Method: Composition-based stats.
Identities = 69/433 (15%), Positives = 158/433 (36%), Gaps = 13/433 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS 61
+ + + G V E ++ ++ + GFR GK P + ++S Y
Sbjct: 12 SINIEENAGCVVSAKVQANPLVTQKCHKEALKTVKKNVVLPGFRKGKAPDNIVESRYSTQ 71
Query: 62 ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDIL 121
+ E + + E LS+ +R + P + D + + G+V + ++
Sbjct: 72 MEQE-LRRLFLRASFEALSQMCDRKPLSPK-AVRSSAIDTCNPVNGGSVSFLYEA-FPVI 128
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
P + L + + E+ E++++ + +A S+ GD +++ VS
Sbjct: 129 PSLPW-EQLSLPDPEPVKEISEEDLENGLKNVAYFFATKTPVTRPSQEGDFISLSLYVSK 187
Query: 182 DNVILEDQSK--KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+N F + D+ + + TG + E E + S +
Sbjct: 188 RGDENSTPVAIFENKYFKISEEDMTDSFKARFLNVSTGHRVEEEIGSEDIQSFLN----G 243
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
L F++ V ++++ A +L ES ++ +++ ++ QK D
Sbjct: 244 DLLTFTVNAVIEISSPEMDDEKARQLQAESLEDLKKKLRIQLENQAKEAQHQKRFSDAED 303
Query: 300 YISNKYTFDVPESLVENEYN-GILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
++ FD+PESL++ +K+ ++ + L+ A++ V
Sbjct: 304 ALAQLIDFDLPESLLQEREELLSREKLLNARLVKYCSDSELEEQKQALLEEAKADARKAV 363
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + + + ++ EE+Q + RF G+ K + + + + R +
Sbjct: 364 KLLFLTQKVFSEKGLSISREELQYMMDVCSRERFGGYPPKDISN-EMIQELVLVARDRLT 422
Query: 418 EDKVIDHILKSVQ 430
K I+ I +
Sbjct: 423 YRKAIEAISSEKK 435
>gi|255589435|ref|XP_002534960.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223524291|gb|EEF27423.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 435
Score = 99.7 bits (246), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 97/230 (42%), Gaps = 7/230 (3%)
Query: 203 LFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLA 262
E + L+G K G +K + +P DH+ LAGK V + V P+ ++ + A
Sbjct: 4 RVKEFDDALIGGKAGTEKSFDITYPADHNPAQLAGKTVTYDVKFVSVSQPVYPEIDAEFA 63
Query: 263 VRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNG 320
LG E + M+ Q ++Q + ++ +VK + + ++ +F++P+++V E N
Sbjct: 64 KGLGVEDGNLDTMKSEIKQSLEQEVDKRIKARVKESVFQALVDETSFELPKAIVSAETNR 123
Query: 321 ILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEM 380
++Q + V A+R +VL + NN++ T +++
Sbjct: 124 LMQVAAQNLRQRGVDPAQVPMEPSVF----ETQAQRNAKLRLVLTELVNTNNLQATADQV 179
Query: 381 QSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ 430
++ + F +++ + L E A E+ V+ +L +
Sbjct: 180 RAMVDSFAQSF-EKPDELVSWYYADVKRLDEPAALATEENVVAWVLDKAK 228
>gi|238925432|ref|YP_002938949.1| trigger factor [Eubacterium rectale ATCC 33656]
gi|238877108|gb|ACR76815.1| trigger factor [Eubacterium rectale ATCC 33656]
Length = 319
Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 63/321 (19%), Positives = 123/321 (38%), Gaps = 12/321 (3%)
Query: 122 PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
I + ++ L+ E++++ Q+A + N E K +GD +DY
Sbjct: 1 MDIVLGNYKGLKANIPYIAYTEEDVNSQIATLLSGNPVREQKTGPLAMGDTAVIDYEGFK 60
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V E + +GS E LVG++ G+ ++I FPE + +LAGK V
Sbjct: 61 DGVAFEGGKAEKYPLGIGSGSFIPGFEEQLVGMEIGEDRDINLSFPEQYHAPELAGKAVV 120
Query: 242 LNFSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ E+++ +N++ A +S ++ ++ ++ E + ++
Sbjct: 121 FKVKLHEIYNEKEAELNDEFAASLNFPEVQSVEDLKKYINEYLEYQVEARKADAAREKLY 180
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQYYHMLA 354
D I + V VE N LQ++ + Q Q + +A
Sbjct: 181 DQILESSSCLVSPQAVETAVNMQLQQMAASFAQQGVAMEQYLQMTGKTMDSLKDELKPVA 240
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+++V VL I NI V++EEM ++ + K A+L+
Sbjct: 241 QKQVKLEAVLDEIIRVENITVSDEEMDEQYELISQKYGQPVDVVKQVIPK-----AQLKP 295
Query: 415 PIFEDKVIDHILKSVQIVDRK 435
+ K I+ + +I+ +
Sbjct: 296 DLLRMKASQLIIDAAEIIMEE 316
>gi|284097334|ref|ZP_06385464.1| Trigger factor [Candidatus Poribacteria sp. WGA-A3]
gi|283831153|gb|EFC35133.1| Trigger factor [Candidatus Poribacteria sp. WGA-A3]
Length = 380
Score = 99.7 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 69/384 (17%), Positives = 149/384 (38%), Gaps = 22/384 (5%)
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
+ I ++ + + + + + L + +I P
Sbjct: 2 EQDVIQRLVPTYYQKAIQESGVAPVL-------VEIPPLERMKANRNASLTFTATVEIKP 54
Query: 123 QIEISSF---DDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD--KVTVDY 177
IE+ + + + + D + ++++D+ + + + + + + V
Sbjct: 55 SIELRDYRPPNPISLKPDSRTITDQDVDKALDRFREQQSRLDAAAAGTRLEEGLYAVVTI 114
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSE--TTEILVGLKTGDQKEIERFFPEDHSIKDL 235
+D ++ K+ VGS + E+LVG + GDQ EI + +P H L
Sbjct: 115 EGFLDGAPVDGSKKEGHLHKVGSQEPMLGLTIDEVLVGKQEGDQAEIPQEYPATHPDARL 174
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVK 294
AGK V SI V V++++ A F++ A++ +++ + + + K
Sbjct: 175 AGKIVTFRVSILGVKQKTLPVLDDEFAKDCGAFDTLDALKDKIRSELESVLKRDIEEGYK 234
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML- 353
QIL+ + + FD+PE+LVE E ++++ E ++D + + +
Sbjct: 235 DQILERLLALHHFDLPEALVEREVRTLVRQRLMEEQRKKGGQFSMDDQIHMEEEAKRIQN 294
Query: 354 -----AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQK-YPN 407
A++RV G+VL I +K + V+E+E+Q + + + + N
Sbjct: 295 EVAPGAQKRVKLGLVLEAIADKEGVFVSEQEIQDEFSKLAKGLQVPLEDIQKMVESGGQN 354
Query: 408 ALAELRAPIFEDKVIDHILKSVQI 431
+ E I DK + + + I
Sbjct: 355 SRQEFEDRIRADKALQLVYQFAVI 378
>gi|307297429|ref|ZP_07577235.1| trigger factor [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916689|gb|EFN47071.1| trigger factor [Thermotogales bacterium mesG1.Ag.4.2]
Length = 434
Score = 99.3 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 65/459 (14%), Positives = 169/459 (36%), Gaps = 28/459 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+ E S + + N+ + + I GFR GKVPLS +++ +
Sbjct: 1 MEKSFVKKEENVETFLFAFDSEEIRKAENDVARYVNQQYTIPGFRKGKVPLSIVRNFLAE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S + E++ + + E L + S + +
Sbjct: 61 SFEEMVL-EVLSDKIEEELKDEKI------------LVPAVISEQKMEGEGAVIEVKLHR 107
Query: 121 LPQIEISSFDDLQVTQDIC-EVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P+++I +++L + EV ++ ++ E+ + E K+ E GD V ++YT+
Sbjct: 108 DPEVKIRDYENLDLKVPKQDEVVLNYVNNRLEELRNEHAIVEPKDGPVENGDLVKIEYTI 167
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D + + + + + + ++G D E R F + + + K
Sbjct: 168 IKDGKKIAENKVQELSVVPEDDRPI---VKNIIGKTKDDVVEFTRTFEDSDNEYFYSVKV 224
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ V P+ ++++ A + E + ++ + ++ + + +++Q
Sbjct: 225 LD-------VLRKSPLDLDDEFAKTVNAEANTLEELKEIVRREGMESFLNWKKDFLRQQA 277
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
+D I++ + ++ ++ ++ + E S Q +E+ ++
Sbjct: 278 MDKINDLVEIGISDATLDYLVQRTIENSKKEKSYEKYLKQ--AGSEEKLIEDLRSGVFDE 335
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + I + EEE+Q+ + + ++ + + ++ + I
Sbjct: 336 IKKARFIDEIASREGFRAEEEEIQAYAEEMAPYWGISAERAKEMVNTRQDVKEDIVSTII 395
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDK 456
+KV+D++++ I D + + D+ + S E +
Sbjct: 396 RNKVLDNVIEKASISDMEPSSDEQLEISESGGEEAPPKE 434
>gi|222100865|ref|YP_002535433.1| Trigger factor [Thermotoga neapolitana DSM 4359]
gi|254789028|sp|B9KAT4|TIG_THENN RecName: Full=Trigger factor; Short=TF
gi|221573255|gb|ACM24067.1| Trigger factor [Thermotoga neapolitana DSM 4359]
Length = 425
Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 78/438 (17%), Positives = 183/438 (41%), Gaps = 30/438 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V E + + L+ + + ++ ++ + + I GFR G+VP + +K G+
Sbjct: 1 MEVKELERDKNRVVLEYVFNREEVLEAEDKAARYLNQRVEIPGFRKGRVPKNILKMRLGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
T+D ++ +++P+ L R+ M P +T E + D + +
Sbjct: 61 DFQEYTLDFLM-DLIPDTLKDRNL--IMSPVVTEREIKEDTA----------RFVVEVHE 107
Query: 121 LPQIEISSFDDLQVTQDICE-VDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P+++I ++V + E V EK ++R++ ++ + + E KE +E+GD V + V
Sbjct: 108 EPEVKIGDVSKIEVEKVDEEKVLEKYVERRLEDLREKHALLEPKEGPAEVGDLVRISMEV 167
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ + G F + L+G K D EIE ++ GKK
Sbjct: 168 YNEEGKNLTTREYEYVIKEGEDRPF---VKDLIGKKKDDVVEIE---------REYEGKK 215
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA--VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
++EV+ + ++LA V FE+ ++ ++ K + +++ ++ Q+
Sbjct: 216 YTYRLKVQEVYRRTLPEIGDELARTVNNEFETLEQLKEELKKEGKDIYDVEMKESMREQL 275
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
L+ + ++ E ++ + +++ E S ++ +L
Sbjct: 276 LEKLPEVVEIEISERTLDLLVQETINRLKREGRYDQIVSSYESEEKLKEELKKRIL--DD 333
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ + I ++ N++V++EE++ + + ++ + + +LR I
Sbjct: 334 IKRDRAIEVIAKERNVDVSDEELEKEAEELAPFWGISPERAKSLVKSRRDLREDLRWAIL 393
Query: 418 EDKVIDHILKSVQIVDRK 435
+ KV+D +L+ V + +
Sbjct: 394 KRKVLDLLLEEVTVKVVE 411
>gi|330878771|gb|EGH12920.1| trigger factor [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 212
Score = 98.9 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 100/220 (45%), Gaps = 10/220 (4%)
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKIKQHSEFLVRQ 291
DLAGK ++ V P +N + + G + R + +++ ++
Sbjct: 1 DLAGKAAEFTVTVNTVSEPKLPELNEEFFKQFGIKETGIEGFRTEVRKNMERELRQAIKS 60
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
KVK Q++D + +VP++L+ENE N + + + D+ + +
Sbjct: 61 KVKNQVMDGLLAANPIEVPKALLENEVNRLRVQAVQQFGGN-------IKPDQLPAELFE 113
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
AKRRV G+++ + ++ +++ + ++ + + + ++++ + K + E
Sbjct: 114 EQAKRRVELGLIVAEVVKQFDLKPDDARVREMIQEMASAY-QEPEQVVAWYYKNEQQMNE 172
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
+R+ + E++V+D +L+ + D+ V++++ + +
Sbjct: 173 VRSVVLEEQVVDTVLQKASVTDKSVSYEEAVKPVEAAKAD 212
>gi|307109590|gb|EFN57828.1| hypothetical protein CHLNCDRAFT_143244 [Chlorella variabilis]
Length = 507
Score = 98.9 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/458 (13%), Positives = 157/458 (34%), Gaps = 45/458 (9%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG--KSI 62
E+ EG L V ++ + +E++R A + G+R GK P + + + G +
Sbjct: 58 EEKLEGFATRLHVT--------AYKKVMEELRKGATLDGYRKGKAPDAALIAHVGGMARV 109
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEG---------TVDLK 113
+ + E+++ V + P E ++ L
Sbjct: 110 ANSALSELLEPAVAAAM--APYEGVAVPESERIEQGAEELEALFRRVGGVPGLALDSGFT 167
Query: 114 LRLSYDILPQIEIS-SFDDLQVTQDICEVDEKEIDRQ------MAEIAKNNVAFEVKETE 166
+ +D +P + + +LQVT + + + + + + +
Sbjct: 168 FSVLFDAVPSLSWKTPYRELQVTVESAGDEASDAAEVERRLVSIRKGQAKLRVVADRGLQ 227
Query: 167 SEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSAD--LFSETTEILVGLKTGDQKEIER 224
V + L ++++++ AD I+ G+K G++KE
Sbjct: 228 PGDLAIVDFSAARADTGEELVGATRQSMRLDTDDADETFLPGIVAIISGMKAGEEKEAPL 287
Query: 225 FFPED--HSIKDLAGKKVRLNFSIKEVFSPLPV-VVNNDLAVRL-GFESESAMRGLCSQK 280
FP D L G + R+ + E+F+ + ++ A ++ + ++ +K
Sbjct: 288 TFPTDEAFQPAPLRGMEARVKVKMTELFTYELPEQLTDEWAGKVLEGADLAGLQQRLLEK 347
Query: 281 IKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD 340
+++ E R++V + +VPESL+ + S Q +
Sbjct: 348 VREEREAAQRERVADAFTSAVGKAVDCEVPESLLSELGSQQYSASLNRFLSEGQLTFETV 407
Query: 341 SIDEEDLQYYHMLAKRR------VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGH 394
+ RR + + I + ++ +E E+++ + +F +
Sbjct: 408 KQLATPELAQQFVTSRREELLELQRSLLGFEDIAVQEGLKPSEAEIEAEFREAARQFSEY 467
Query: 395 EKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
++ ++ + +KV+D ++ + +
Sbjct: 468 KQDF-----DAERLREQVFETVQANKVMDWLMANCTVK 500
>gi|283797553|ref|ZP_06346706.1| trigger factor [Clostridium sp. M62/1]
gi|291074924|gb|EFE12288.1| trigger factor [Clostridium sp. M62/1]
gi|295090846|emb|CBK76953.1| trigger factor [Clostridium cf. saccharolyticum K10]
Length = 356
Score = 98.9 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/311 (16%), Positives = 117/311 (37%), Gaps = 12/311 (3%)
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ ++ VT V ++E+D ++ + ++ + +E GD+V +DY D V E
Sbjct: 43 EYKNVPVTVVKPSVSDEELDARIETVLGGYATWDAVDRAAEEGDRVNIDYKGLKDGVAFE 102
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ + ++GS + L+G G+Q+ + FPE++ ++LAG+ V ++
Sbjct: 103 GGTAEGYNLVLGSGSFIDGFEDGLIGAAAGEQRNLNLTFPENYQSEELAGQDVVFEVTVN 162
Query: 248 EVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
EV + + + A + Q++ + Q+ ++L I
Sbjct: 163 EVAEKHTPELTEAFVAENFPDLGTVDAYKEDLRQQMLDSKQQQSDQQRNAELLSAIVEDS 222
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHMLAKRRVLTG 361
V+ Y+ + S + + ++ +A+ V
Sbjct: 223 EITCATEDVDEIYDQQINYYTTMASLYGLELADYASVMGMDEDTFRTEVRNIAELTVKQN 282
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+VL + +K ++V + + + AL ++ M++ + I +K
Sbjct: 283 MVLDEVAKKEGLKVEDAD-RQALAEEYKDVYESVDDMIE-----QAGAENVDRAILSEKA 336
Query: 422 IDHILKSVQIV 432
+ I+ + I
Sbjct: 337 LQVIVDNADIT 347
>gi|225631190|ref|ZP_03787889.1| trigger factor, putative [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591112|gb|EEH12295.1| trigger factor, putative [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 237
Score = 97.8 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/221 (20%), Positives = 100/221 (45%), Gaps = 6/221 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
E + LK E ++ + S+ + N R+++I A GFR GK+P + + Y L
Sbjct: 20 KELSIDKLKYEYEITVGSDYVKQKVNSRLQEIAENAKSPGFRAGKMPYDLVVANYKNEAL 79
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
I+ I +++ K + ++ + P + + G + +LS++ +P+
Sbjct: 80 EYVINNTIDYCSSDLMKKIEVKSHIYPKVDVISLP---DLGKENEEGNFVYKLSFESMPE 136
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIA---KNNVAFEVKETESEIGDKVTVDYTVS 180
+ + D + + + +++E++I + I N + + +++ GDK+ +D+
Sbjct: 137 VPVIDLDKINLKKIEAKIEEEDIKEFIDSIKTKFPNFASVDDASYQAKDGDKLIIDFEGR 196
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKE 221
+ N + + S KN +GS + + L G+K G+ K
Sbjct: 197 IRNKLFQGGSSKNFAVNLGSGTFINGFEDQLTGMKKGETKT 237
>gi|257063196|ref|YP_003142868.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Slackia heliotrinireducens DSM 20476]
gi|256790849|gb|ACV21519.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Slackia heliotrinireducens DSM 20476]
Length = 430
Score = 97.4 bits (240), Expect = 5e-18, Method: Composition-based stats.
Identities = 62/443 (13%), Positives = 164/443 (37%), Gaps = 26/443 (5%)
Query: 1 MQV----IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKS 56
M V EK G K + + + ++ + E +E + A + + S ++
Sbjct: 1 MSVEILNSEKIMNGQKMRVKLRVSADEKAEIVQESLEALAEMARLP---KDEKLRSELEK 57
Query: 57 LYGKSILSETID-EIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLR 115
G L+ I + + + ++ P + G +
Sbjct: 58 QVGADRLASAISLSVAQNCATKPVNDLKLHILFDPELVGESIPGVFAEG------PEEFS 111
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV 175
+ + P++E+SS++ + + + EV + +D Q+A++ + +E + G + V
Sbjct: 112 VDMVLCPEMELSSYEPVHIKVNSLEVTDAMVDAQVAQVLEMASTYEPTDEPVAEGRVIQV 171
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
+ ++ S KN+ + + E E G+ G+++E E +
Sbjct: 172 EMETQINGKPATGLSGKNMPLNLDPTMVPKELIERATGMVKGEEREFEFSML-NPQTPAA 230
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLA---VRLGFESESAMRGLCSQKIKQHSEFLVRQK 292
+ + ++ + ++L + + R + +K + Q+
Sbjct: 231 RPDLFHVKLKVLDIREKKTPELTDELVATTISPLDGTVEKFREHVREDMKAELDRRNEQQ 290
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMS----SANQKSQNVDSIDEEDLQ 348
+Q+ ++ + + + L++ + ++ ++ + Q Q + ++
Sbjct: 291 TAQQLDSELAKRLQGSISDMLLQRAGQDAMANMQQSLAQQGMNMQQYMQQMGMEQQQFQM 350
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ A+ + G L + +E+T+E++++AL+Q PG+E+ M +F K +A
Sbjct: 351 MMMVQARESLRQGFALDALARHLKLELTDEDIEAALHQMS---PGNEQAMRANFDKN-DA 406
Query: 409 LAELRAPIFEDKVIDHILKSVQI 431
+ K + + ++ I
Sbjct: 407 WFLVNDIAMRMKAHNWLAENSTI 429
>gi|330684288|gb|EGG96026.1| trigger factor [Staphylococcus epidermidis VCU121]
Length = 270
Score = 97.0 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 118/267 (44%), Gaps = 10/267 (3%)
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
V +D++ SVD E + VGS E L G+KTG++K++ FPE++
Sbjct: 3 VNIDFSGSVDGEEFEGGQAEGYDLEVGSGSFIPGFEEQLEGMKTGEEKDVVVTFPEEYHA 62
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQHSEFLVR 290
++LAGK+ + E+ +N+++A L E S + +++ +
Sbjct: 63 EELAGKEATFKTKVNEIKYKDVPELNDEIANELDAEANSVDEYKENLRKRLAEQKATEAE 122
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD----SIDEED 346
K + + ++ T D+P+++++ E + ++Q+ + Q + +
Sbjct: 123 NTEKEEAIKKATDNATIDIPQAMIDTELDRMVQEFGQRIQQQGLDLQTYFQISGQDESQL 182
Query: 347 LQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYP 406
+ A++RV T + L I + NIEV++E++ L + +F + + +
Sbjct: 183 REQMKDDAEQRVKTNLTLTAIADAENIEVSDEDIDKELEKMSEQFNISVEDIKNTL---- 238
Query: 407 NALAELRAPIFEDKVIDHILKSVQIVD 433
++ + KVID + + ++V+
Sbjct: 239 GNTDIVKNDVRIQKVIDLLKDNAKLVE 265
>gi|308800466|ref|XP_003075014.1| trigger factor-like (ISS) [Ostreococcus tauri]
gi|116061567|emb|CAL52285.1| trigger factor-like (ISS) [Ostreococcus tauri]
Length = 515
Score = 97.0 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 70/456 (15%), Positives = 151/456 (33%), Gaps = 45/456 (9%)
Query: 13 RELDVIIPSNRLTDSFNERIEDIRSKANIKGFR--------PGKVPLSHIKSLYG-KSIL 63
+L V +P L ++ + + GF K+P+ + + G K
Sbjct: 62 VKLSVRVPEALLQKCYDAVVNGFNDTVTVPGFNASKKGEKAKNKIPMQLLINHVGKKEFK 121
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGL----IEGTVDLKLRLSYD 119
S ++E ++ +PE + A++ S I D+ + DLK + +
Sbjct: 122 SACVEEALQNSLPEAMELVSAN-ALQDSERITTHFLDMFEAFGGMHSRPSEDLKYEVLVE 180
Query: 120 ILPQIEIS-SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
+ P I + + L V D + G +
Sbjct: 181 LEPMISFTGDYKALSVKVQSLGDDNTAEKDAEVFYKNALKDLSTLRVCVDRGLVIGDAAV 240
Query: 179 VSV----------DNVILEDQSKKNVQFIVGSAD-LFSETTEILVGLKTGDQKEIERFFP 227
V V D L + N Q G + E + G++ G++K E FP
Sbjct: 241 VDVDAIRVNDDGTDGEPLGGMKQDNFQLDTGDENIKLPGLLENIEGMEVGEKKSFEITFP 300
Query: 228 EDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHS 285
D + K R ++KE+F+ ++ LA ++ S + + + +K +
Sbjct: 301 GDWPQAYVRNVKARFTVTVKELFAREFPKDDDKLADKIFPGSTSIADAKEKILESVKAKN 360
Query: 286 EFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV------ 339
+F + + + +D ++ +P SL+E + + + M + S
Sbjct: 361 KFDLERAIDEACVDALAEICDVRIPRSLIEEQGRNMYSEQLLAMQVKQKMSPKALESLAS 420
Query: 340 DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKML 399
+ E L ++ I + + N+ VT EE+ + + + ++
Sbjct: 421 AKMVNEYLTKQKNEIEKVCRRTIACEQVIKLENLSVTGEELHAEVEK----AKSEFEEFG 476
Query: 400 DHFQKYP---NALAELRAPIFEDKVIDHILKSVQIV 432
+ + A L A + + ++ ++
Sbjct: 477 TEYNENQLYVQAQETLEAKL----AFKWLKENCKVE 508
>gi|319936251|ref|ZP_08010670.1| trigger factor [Coprobacillus sp. 29_1]
gi|319808683|gb|EFW05225.1| trigger factor [Coprobacillus sp. 29_1]
Length = 316
Score = 96.6 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 55/317 (17%), Positives = 130/317 (41%), Gaps = 12/317 (3%)
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
++ + +QV + ++E+++Q+ + N F K+ E GD T+D+ D
Sbjct: 5 NKLGQYKGIQVKVEKHIATDEEVNQQIEAMVSQNPTFVEKDGEVAHGDMTTIDFEGFKDG 64
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
V E + Q +GS E ++G+K G+ K++ FPED+ + DLAG V
Sbjct: 65 VAFEGGKAEGHQLEIGSGQFIPGFEEQMIGMKKGETKDLNLTFPEDYGMADLAGADVVFK 124
Query: 244 FSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ +V + +N++ ++ ++ +++ + R V+ I +
Sbjct: 125 VKLHKVENKQESELNDEFVASLNVPNMQTVEDLQNQMKVQLQSQHDQTYRTNVENAIFEK 184
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI----DEEDLQYYHMLAKR 356
+ +V + ++ +Q +R +++ + + + +E Q AK+
Sbjct: 185 LIEDSEVEVNDEDIQRAMEQHIQHIRMDLAKQGMQLEQYLQMMGSTEEALRQQIEPSAKQ 244
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ ++ I N+ T+EE+ + + ++++L+ A+L+
Sbjct: 245 QATFEAIIDEIANVENLTTTDEEIDQQIEMIAQQNQMTKEEVLERVSA-----ADLKHDY 299
Query: 417 FEDKVIDHILKSVQIVD 433
K +++S I +
Sbjct: 300 NRVKASQLVIQSANINE 316
>gi|330443928|ref|YP_004376914.1| trigger factor [Chlamydophila pecorum E58]
gi|328807038|gb|AEB41211.1| trigger factor [Chlamydophila pecorum E58]
Length = 414
Score = 96.6 bits (238), Expect = 8e-18, Method: Composition-based stats.
Identities = 56/406 (13%), Positives = 140/406 (34%), Gaps = 14/406 (3%)
Query: 29 NERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAM 88
+ ++ ++ +I GFR GKVP I++ Y I E + ++ + + D +
Sbjct: 11 KQALKKVKKNVSIPGFRKGKVPDDIIENRYPHPIRKECNELLVHTAYTSLSTLGDRKPLS 70
Query: 89 RPSITINEGESDITSGLIEGTVDLKLRLS-YDILPQIEISSFDDLQVTQDICEVDEKEID 147
++ I + ++ + ++P+I S + TQ DE
Sbjct: 71 PQAVQSTS----IKEADLANGGVVEFIYEAFPVVPEISWESLFLPEATQHKEVSDEDVEK 126
Query: 148 RQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSET 207
V E + D+ +N F + ++
Sbjct: 127 SLNNIAHFFATKTPVTRPSQEGDFISLSLHISKQDDESFLVPIFENKYFKLSDEEMSETF 186
Query: 208 TEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF 267
E +G+ G + E S + L F++ V ++ + A +L
Sbjct: 187 KEKFLGVSVGHRVVEYVSSSEIQSFLN----GDTLIFTVNAVVEVEVPELDEEKARQLQV 242
Query: 268 ESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRF 327
+S ++ +++ ++ Q+ + D ++ F++P +L+++ + + ++
Sbjct: 243 DSLEELKSKLRAQLENQAKDKQHQQRFVETEDALAAMADFELPANLLKDRISMLTREKLL 302
Query: 328 EMSSAN-QKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ 386
++ ++S ++ L+ A + + + I E + T EE+Q +
Sbjct: 303 NARLIEYCSNEELESRKQKLLKEAEDSAVKALRLLFLTRKIFEDEKLSFTREELQYMIEV 362
Query: 387 QLGRF--PGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ 430
P K + + + ++ R + K I+ + +
Sbjct: 363 CSRERFGPQPPKDISNEMLQ--ELVSAARDRLTYSKAIEKAREKAE 406
>gi|15643457|ref|NP_228503.1| trigger factor, putative [Thermotoga maritima MSB8]
gi|281411922|ref|YP_003346001.1| trigger factor [Thermotoga naphthophila RKU-10]
gi|12230736|sp|Q9WZF8|TIG_THEMA RecName: Full=Trigger factor; Short=TF
gi|4981217|gb|AAD35776.1|AE001741_9 trigger factor, putative [Thermotoga maritima MSB8]
gi|281373025|gb|ADA66587.1| trigger factor [Thermotoga naphthophila RKU-10]
Length = 425
Score = 96.2 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 75/437 (17%), Positives = 182/437 (41%), Gaps = 28/437 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V E + + L+ + + + + ++ + + + I GFR G++P + +K G+
Sbjct: 1 MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPGFRKGRIPKNVLKMKLGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
T+D ++ +++P+ L R + P +T E + ++E + ++R+
Sbjct: 61 EFQEYTLDFLM-DLIPDTLKDRKL--ILSPIVTERELKDVTARVVVEVHEEPEVRIGDIS 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
++E + + EK ++R++ ++ +++ E KE +E GD V V+ V
Sbjct: 118 KIEVEKVDEEKV---------LEKYVERRIEDLRESHALLEPKEGPAEAGDLVRVNMEVY 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + F + LVG K GD EIE ++ GKK
Sbjct: 169 NEEGKKLTSREYEYVISEDEDRPF---VKDLVGKKKGDVVEIE---------REYEGKKY 216
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++EV+ + ++LA FE+ ++ ++ K+ + +++ ++ Q+L
Sbjct: 217 TYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQLKESLKKEGKEIYDVEMKESMREQLL 276
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++ + +E N + +++ E + +E+ + +
Sbjct: 277 EKLPEIVEIEISDRTLEILVNEAINRLKREGRYEQIV--SSYESEEKFREELKERILDDI 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
V+ + ++ I V +EE++ + + + + + ELR I +
Sbjct: 335 KRDRVIEVLAQEKGISVNDEELEKEAEELAPFWGISPDRAKSLVKARQDLREELRWAILK 394
Query: 419 DKVIDHILKSVQIVDRK 435
KV+D +L+ V++ +
Sbjct: 395 RKVLDLLLQEVKVKVVE 411
>gi|281500761|pdb|3GTY|X Chain X, Promiscuous Substrate Recognition In Folding And Assembly
Activities Of The Trigger Factor Chaperone
Length = 433
Score = 96.2 bits (237), Expect = 1e-17, Method: Composition-based stats.
Identities = 75/437 (17%), Positives = 182/437 (41%), Gaps = 28/437 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V E + + L+ + + + + ++ + + + I GFR G++P + +K G+
Sbjct: 1 MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPGFRKGRIPKNVLKMKLGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
T+D ++ +++P+ L R + P +T E + ++E + ++R+
Sbjct: 61 EFQEYTLDFLM-DLIPDTLKDRKL--ILSPIVTERELKDVTARVVVEVHEEPEVRIGDIS 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
++E + + EK ++R++ ++ +++ E KE +E GD V V+ V
Sbjct: 118 KIEVEKVDEEKV---------LEKYVERRIEDLRESHALLEPKEGPAEAGDLVRVNMEVY 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + F + LVG K GD EIE ++ GKK
Sbjct: 169 NEEGKKLTSREYEYVISEDEDRPF---VKDLVGKKKGDVVEIE---------REYEGKKY 216
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++EV+ + ++LA FE+ ++ ++ K+ + +++ ++ Q+L
Sbjct: 217 TYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQLKESLKKEGKEIYDVEMKESMREQLL 276
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++ + +E N + +++ E + +E+ + +
Sbjct: 277 EKLPEIVEIEISDRTLEILVNEAINRLKREGRYEQIV--SSYESEEKFREELKERILDDI 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
V+ + ++ I V +EE++ + + + + + ELR I +
Sbjct: 335 KRDRVIEVLAQEKGISVNDEELEKEAEELAPFWGISPDRAKSLVKARQDLREELRWAILK 394
Query: 419 DKVIDHILKSVQIVDRK 435
KV+D +L+ V++ +
Sbjct: 395 RKVLDLLLQEVKVKVVE 411
>gi|227872169|ref|ZP_03990537.1| possible peptidylprolyl isomerase [Oribacterium sinus F0268]
gi|227841982|gb|EEJ52244.1| possible peptidylprolyl isomerase [Oribacterium sinus F0268]
Length = 296
Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/282 (18%), Positives = 112/282 (39%), Gaps = 7/282 (2%)
Query: 157 NVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKT 216
N + + D T+D+ SV ++ +GS + L+G K
Sbjct: 1 NSRMVDVDRAIKKNDIATIDFVGSVGGKEFPGGRGEDYPLTIGSGTFIPGFEDQLIGAKA 60
Query: 217 GDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRG 275
G++ ++ FPE++ KDLAGK+ ++K V +++ A FE+ +
Sbjct: 61 GEEVDVHVTFPENYGAKDLAGKEALFKVNVKAVKEKQVPKADDEFASEVSEFETLKEYKE 120
Query: 276 LCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK 335
++IK+ E +V+ ++ + + ++PE +VE + + + M +
Sbjct: 121 DLKKQIKEEKEKRATSQVENNVVAKVVENASVELPEPMVEMQLDQMFYDYARRMEAQGIP 180
Query: 336 SQNVDS----IDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF 391
+E A + + T +VL I +K IEVTEE ++ L + ++
Sbjct: 181 MDQYMQITGLTEEGLKSQMRETAVQNIKTSLVLDAIQKKEGIEVTEEAIEKELERIAEQY 240
Query: 392 PGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVD 433
++ ++ ++ + ID ++ ++V
Sbjct: 241 RMKKEDLVKTISDSQKL--SIKRELDIQATIDKLVSEAKLVK 280
>gi|159484654|ref|XP_001700369.1| chloroplast trigger factor [Chlamydomonas reinhardtii]
gi|158272410|gb|EDO98211.1| chloroplast trigger factor [Chlamydomonas reinhardtii]
Length = 548
Score = 95.8 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 62/452 (13%), Positives = 160/452 (35%), Gaps = 30/452 (6%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKA--NIKGFRPGK-VPLSHIKSLY 58
V + R + +P++ + D F ++ I +KG++ GK +PLS +
Sbjct: 81 SVAVEELGTCSRSAIITVPASTVKDIFKRGVKRIERDVVGQLKGWQAGKPLPLSMVIQQV 140
Query: 59 GKSILSET--IDEIIKEIVPEILSKR-DERAAMRPSITINEGESDITSGLIEGTVDLKLR 115
G +T ++E++ E +P+ + + RA S+T+ + + + R
Sbjct: 141 GGQNKFKTFCLEELLLEALPKGIESARNGRAVDPASVTVPPEDFPSMLERYDPAKEFFFR 200
Query: 116 LSYDILPQIEISSF-DDLQVTQDICEVDEKEIDRQMAEIAKNNVAF------EVKETESE 168
+D+ P + + ++L+VT + I + + +
Sbjct: 201 AMFDVAPPVVWRTPLEELEVTIRDTGDFSTDAAAADDLIRQYRKQHGFSRVVAGRGLQLG 260
Query: 169 IGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPE 228
+ ++ T L + K F + T ++G+K G+ + PE
Sbjct: 261 DTLVIDLEITSKATGQALPGLTHKRFSFDTEAD--VLGITSGMLGMKAGESRTFNMSMPE 318
Query: 229 DHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE---SAMRGLCSQKIKQHS 285
D+ ++ V++ + E+F N++ + MR
Sbjct: 319 DYDVEFWQSMPVKVAAKVHEIFEWTLPEFNDEYVAKQHEGKWGSAKEMREALIASTAMQR 378
Query: 286 EFLVRQKVKRQILDYISNKYTFD-VPESLVENEYNGILQKVRFEM------SSANQKSQN 338
+ + ++ ++ +++ VP +VE Q +M S + +
Sbjct: 379 VTELDKALEDAVVKAVADALDMPEVPPRMVEQLGERQFQAQLLQMIEDRIGSREDVEKLA 438
Query: 339 VDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKM 398
+ + E ++ + +V + + I + + + +E +++ + + +
Sbjct: 439 TEEMAAEFIRERKKDLEDQVKFNLAVDDIWVRKGLVLEDEAVEAEFSLRARQM-----EA 493
Query: 399 LDHFQKYPNALAELRAPIFEDKVIDHILKSVQ 430
+ + L ++R + VI+ + +V+
Sbjct: 494 VGQPFDREDMLDDVRETVKSVTVIEWLKDNVK 525
>gi|110776269|ref|XP_001123103.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 1-like,
partial [Apis mellifera]
Length = 222
Score = 95.5 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 61/97 (62%)
Query: 339 VDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKM 398
+ +E Y +A+RRV G+++ IG N+I + E+E+ A+ + R+PG EK++
Sbjct: 1 KNKDEETLKADYRKIAERRVRLGLLVVEIGRVNSITINEDELVQAMRAEAMRYPGQEKEV 60
Query: 399 LDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRK 435
++ FQK P A+ +R P++E+KV+D+I + + D++
Sbjct: 61 MEFFQKNPQAVESIRGPLYENKVLDYITELATVEDKE 97
>gi|148269381|ref|YP_001243841.1| trigger factor domain-containing protein [Thermotoga petrophila
RKU-1]
gi|170288039|ref|YP_001738277.1| trigger factor domain-containing protein [Thermotoga sp. RQ2]
gi|166229950|sp|A5IJ92|TIG_THEP1 RecName: Full=Trigger factor; Short=TF
gi|238688805|sp|B1L813|TIG_THESQ RecName: Full=Trigger factor; Short=TF
gi|147734925|gb|ABQ46265.1| trigger factor, C-terminal domain protein [Thermotoga petrophila
RKU-1]
gi|170175542|gb|ACB08594.1| trigger factor domain protein [Thermotoga sp. RQ2]
Length = 425
Score = 95.5 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 75/437 (17%), Positives = 182/437 (41%), Gaps = 28/437 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V E + + L+ + + + + ++ + + + I GFR G++P + +K G+
Sbjct: 1 MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPGFRKGRIPKNVLKMKLGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
T+D ++ +++P+ L R + P +T E + ++E + ++R+
Sbjct: 61 EFQEYTLDFLM-DLIPDTLKDRKL--ILSPIVTERELKDVTARVVVEVHEEPEVRIGDIS 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
++E + + EK ++R++ ++ +++ E KE +E GD V V+ V
Sbjct: 118 KIEVEKVDEEKV---------LEKYVERRIEDLRESHALLEPKEGPAEAGDLVRVNMEVY 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + F + LVG K GD EIE ++ GKK
Sbjct: 169 NEEEKKLTSREYEYVISEDEDRPF---VKDLVGKKKGDVVEIE---------REYEGKKY 216
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++EV+ + ++LA FE+ ++ ++ K+ + +++ ++ Q+L
Sbjct: 217 TYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQLKESLKKEGKEIYDVEMKESMREQLL 276
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++ + +E N + +++ E + +E+ + +
Sbjct: 277 EKLPEIVEIEISDRTLEILVNEAINRLKREGRYEQIV--SSYESEEKFREELKERILDDI 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
V+ + ++ I V +EE++ + + + + + ELR I +
Sbjct: 335 KRDRVIEVLAQEKGISVNDEELEKEAEELAPFWGISPDRAKSLVKARQDLREELRWAILK 394
Query: 419 DKVIDHILKSVQIVDRK 435
KV+D +L+ V++ +
Sbjct: 395 RKVLDLLLQEVKVKVVE 411
>gi|218681021|ref|ZP_03528918.1| trigger factor [Rhizobium etli CIAT 894]
Length = 109
Score = 95.5 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/104 (45%), Positives = 71/104 (68%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
MQVIE +EGLKRE+ V+IP+ + D + R+ D++ K I GFRPGKVP +H+K +YGK
Sbjct: 1 MQVIETLAEGLKREIKVVIPAKDMQDKMDARLADVKDKVRINGFRPGKVPAAHLKKVYGK 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSG 104
SI++E ++EI++E ILS R E++A +P I + E + +
Sbjct: 61 SIMAELVNEIVREQPAAILSSRGEKSATQPEIAMTEDKDEADKI 104
>gi|148377421|ref|YP_001256297.1| trigger factor [Mycoplasma agalactiae PG2]
gi|148291467|emb|CAL58852.1| Trigger factor [Mycoplasma agalactiae PG2]
Length = 500
Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 73/487 (14%), Positives = 168/487 (34%), Gaps = 32/487 (6%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+ IE E ++ + T+ FN+ + K + GFRPGK P +
Sbjct: 4 KSIELNKEKGSVVVEYEFTGEKWTNIFNKTKANKIKKLKVDGFRPGKAPKHIVDKYVTPV 63
Query: 61 SILSETIDEIIKEIVPEILSKRD--ERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
++ S++I E EI + A++ ++ + S +I+ L LS
Sbjct: 64 TVASDSIHEAYNVFADEIFEEVKKQHENALQNAVLLELPVLAEESSVIKIEFPLLPDLSG 123
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
I++ +V++ + + + K+ ++++GD VT+ Y
Sbjct: 124 -----IKLDESIKTKVSKLKVTEADIDSYLDELLSKNALLMPLDKKDKTKLGDVVTLKYK 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V+N E +GS + LVG G + E+ FPE++++ L G+
Sbjct: 179 GFVNNEPFEGGEADQFDLKLGSETFIDTFEDQLVGKSVGWKGEVNVTFPENYAVPTLKGQ 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG---FESESAMRGLCSQKIKQHSEFLVRQKVKR 295
I + + ++ L + R + + +++ V
Sbjct: 239 PAVFECEILDAKRLEKITLDEKNVKELHLPNVSTIEEARAYAKEILTVKKYAEIQRNVID 298
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYH 351
++ + K+ F + + LV L++++ + + K + + + + +
Sbjct: 299 SLVAELVEKHQFAISDILVATGAQKRLEEIKANLKTQGIKFNDYLDLIKTSEADFNKLVL 358
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHE---KKMLDHFQKYP-- 406
K +V + ++ + E L+ F + +L + ++ P
Sbjct: 359 NEEKEVTKRLLVHEELMKQFKDKAEISEENKNLWAINIAFGQQFIPLQFVLQYMKQNPLA 418
Query: 407 ---NALAELRAPIFEDKVIDHILKSVQIVDRKVTFD------QLFDNSSESSPEKLLDKS 457
+ I E + IL + D+K + +L + + + E +
Sbjct: 419 EGEEQNGQFTEAIKEVAITRLILAQL---DKKTSEQNDKVALELANKLIKQAEEDIKKFE 475
Query: 458 SKVETFQ 464
+ +
Sbjct: 476 EEAKKIH 482
>gi|124514482|gb|EAY55995.1| probable trigger factor [Leptospirillum rubarum]
Length = 467
Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 67/443 (15%), Positives = 142/443 (32%), Gaps = 27/443 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSL--Y 58
M V K EG V + + +I+ + + + G+RPG VP S I+
Sbjct: 1 MDVQIKRGEGNLHAFTVDLSGEEIRTRVRGKIKAVNPRLKVPGYRPGHVPESMIRRNRDL 60
Query: 59 GKSILSETIDEIIKEIVPEILSKRDERAA-MRPSITINEGESDITSGLIEGTVDLKLRLS 117
+SI E +D+++ EI+ K + P+ E +S+ T IEG +++
Sbjct: 61 IRSIHQEVLDDLLDSAYSEIIKKSSGTVVHLNPAPVSLETKSEETGLTIEGELEI----- 115
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+++ +E + + I +N E I V +
Sbjct: 116 FEVPADRSPYGVVLSPEEPLSVSEEEIATEIERLRIMMSNNFREDLPEAEPIQMSDFVRF 175
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ + + VG + + L+G K GD+ + S K
Sbjct: 176 KIHFVHPSTGETFDSEQVSEVGGDGVPEAFNQALLGKKRGDRVQTTLPLNVPVSGKGGGT 235
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ + + + + F ++ E + + +
Sbjct: 236 RVETHPAELEVLDIQRRIPLEIGELIARVFPKSEEGDVKTESDLRSDVEKGLLGQKVLGV 295
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
L ++ + ++ +K S + D ++
Sbjct: 296 LRKKRE----ELRKEILATWGVATPEKRMAREYQRLSLSSDTD----------REEYRQI 341
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
L +VL +GE+ IE E + Q + + +D AL+
Sbjct: 342 FLWQLVLDQLGEREKIEPDWETVGQEYRQIMQSRGEAPSREVDR-----EALSIAMQGAR 396
Query: 418 EDKVIDHILKSVQIVDRKVTFDQ 440
K+ + +L+ Q +++ FD+
Sbjct: 397 RIKLEEMMLRQAQFGGQELFFDE 419
>gi|217077312|ref|YP_002335030.1| trigger factor [Thermosipho africanus TCF52B]
gi|217037167|gb|ACJ75689.1| trigger factor [Thermosipho africanus TCF52B]
Length = 435
Score = 95.1 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 71/440 (16%), Positives = 163/440 (37%), Gaps = 14/440 (3%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ E + + I S + + + ++ K I+GFR GKVPLS K+ +GK
Sbjct: 1 MEIKELGVDKNIVTKEFIFDSAEIQRAEKRTLNELNRKYTIEGFRKGKVPLSVFKARFGK 60
Query: 61 SILSE-TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+++++E + + + P I E S+ ++ +++
Sbjct: 61 DFYDYFVFEQLVEETYKSF--EEESNLLLIPEIAEKEINSESA----------RIVVNFH 108
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
P ++ + +V E +D ++ + + N E KE +E D V V V
Sbjct: 109 KKPVAKVDFEKIKVKVANKDQVLENYLDLRLKTLREENAVLEPKEGPAEFDDLVRVKTYV 168
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ ++++ D T + LVG K GD E +R F + K + K
Sbjct: 169 TNKETGKVLVDGNEDEYVLYKDDERP-TIQNLVGHKKGDVVEFDREFQKGEEEKIVYNYK 227
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
+ + K + L + + E+ ++ ++ + + ++ ++ QIL
Sbjct: 228 IEILDVYKRILPELTDEFVKNNLAEMHLETLDELKNKILEEGTKIYDDEIKHSIREQILA 287
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVL 359
+ + E ++ I+ ++ E + ++ + +++ +
Sbjct: 288 QLPEATELFISEKTIDYAVRLIVNNMKEEGKYEEYVKKYDSEDKAKEAIREYYVSELKKE 347
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
I + T+EE++ + ++ ++ E+ IF D
Sbjct: 348 AAIEKIAKEYNIERKATDEELEKYAEILAPYWGISVERAKVLVKERAEVRNEVENMIFVD 407
Query: 420 KVIDHILKSVQIVDRKVTFD 439
KV+D I ++V+ + +
Sbjct: 408 KVLDKISENVEREIVDINKE 427
>gi|238809671|dbj|BAH69461.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 511
Score = 94.7 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 67/443 (15%), Positives = 167/443 (37%), Gaps = 32/443 (7%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SILSETI 67
+ + + I + + I GFRPGK P I+ S+ SE +
Sbjct: 17 KKSELVYTLEINGKEWEKLYADAKAKEVKNIKIPGFRPGKAPQHEIEKRVNPLSVASEVV 76
Query: 68 DEIIKEI---VPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
D+ + + E L K ++R A P I + + ++ L +++ +LP
Sbjct: 77 DQYWRNNHDRLKEELLKENKRIAFIPKIDLKD---------LDPKKGATLEITFPLLPDF 127
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYTVSVD 182
E + ++ ++++K+I+ +A+ + N K+ +++ GD VT+DY +
Sbjct: 128 EKIQIKSPKTKFELIKIEKKDIEDWIAQQLEKNALLLPLKKDEKTKDGDTVTIDYKGFIK 187
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ + + +GS + L+G K G + E++ FP++++++ L G+
Sbjct: 188 DEPFDGGEAQGFDLKLGSHTFIDTFEDQLIGKKIGWKGEVKVTFPKEYAVEKLKGQPATF 247
Query: 243 NFSIKEVFSPLPVVVNNDLA------VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
IK+ V + + ++ + ++ ++ + + +
Sbjct: 248 EVEIKDAKRREKVELTDKNFGTVRLAKMSEAKNAAEVKKEVQLLLEIGALDESIENYFNE 307
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+++ K F + ++ ++ + L ++ + K + + + L +
Sbjct: 308 LVEEFDRKNDFIIHKAFIKEDVKKSLSELESNLKQQKIKLHEYLELLGQTKEQLMDLLAK 367
Query: 357 ----RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLD-------HFQKY 405
+V + I ++ E +++ + K + D +
Sbjct: 368 DHSSKVKKQTISTEIVKQVKPEFHKDKFAFRILSLAYNTGLDTKFIEDTFFDEKGEIKSS 427
Query: 406 PNALAELRAPIFEDKVIDHILKS 428
NA+ L+ I +KV++ K+
Sbjct: 428 VNAMDTLKTFIIIEKVLEKFDKN 450
>gi|308189700|ref|YP_003922631.1| peptidylprolyl isomerase (trigger factor) [Mycoplasma fermentans
JER]
gi|319776884|ref|YP_004136535.1| trigger factor [Mycoplasma fermentans M64]
gi|307624442|gb|ADN68747.1| peptidylprolyl isomerase (trigger factor) [Mycoplasma fermentans
JER]
gi|318037959|gb|ADV34158.1| Trigger factor [Mycoplasma fermentans M64]
Length = 507
Score = 94.7 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 67/443 (15%), Positives = 167/443 (37%), Gaps = 32/443 (7%)
Query: 9 EGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK-SILSETI 67
+ + + I + + I GFRPGK P I+ S+ SE +
Sbjct: 13 KKSELVYTLEINGKEWEKLYADAKAKEVKNIKIPGFRPGKAPQHEIEKRVNPLSVASEVV 72
Query: 68 DEIIKEI---VPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
D+ + + E L K ++R A P I + + ++ L +++ +LP
Sbjct: 73 DQYWRNNHDRLKEELLKENKRIAFIPKIDLKD---------LDPKKGATLEITFPLLPDF 123
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV--KETESEIGDKVTVDYTVSVD 182
E + ++ ++++K+I+ +A+ + N K+ +++ GD VT+DY +
Sbjct: 124 EKIQIKSPKTKFELIKIEKKDIEDWIAQQLEKNALLLPLKKDEKTKDGDTVTIDYKGFIK 183
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ + + +GS + L+G K G + E++ FP++++++ L G+
Sbjct: 184 DEPFDGGEAQGFDLKLGSHTFIDTFEDQLIGKKIGWKGEVKVTFPKEYAVEKLKGQPATF 243
Query: 243 NFSIKEVFSPLPVVVNNDLA------VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
IK+ V + + ++ + ++ ++ + + +
Sbjct: 244 EVEIKDAKRREKVELTDKNFGTVRLAKMSEAKNAAEVKKEVQLLLEIGALDESIENYFNE 303
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+++ K F + ++ ++ + L ++ + K + + + L +
Sbjct: 304 LVEEFDRKNDFIIHKAFIKEDVKKSLSELESNLKQQKIKLHEYLELLGQTKEQLMDLLAK 363
Query: 357 ----RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLD-------HFQKY 405
+V + I ++ E +++ + K + D +
Sbjct: 364 DHSSKVKKQTISTEIVKQVKPEFHKDKFAFRILSLAYNTGLDTKFIEDTFFDEKGEIKSS 423
Query: 406 PNALAELRAPIFEDKVIDHILKS 428
NA+ L+ I +KV++ K+
Sbjct: 424 VNAMDTLKTFIIIEKVLEKFDKN 446
>gi|261884618|ref|ZP_06008657.1| trigger factor [Campylobacter fetus subsp. venerealis str. Azul-94]
Length = 225
Score = 94.3 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 14/233 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V K + ++ L + I GFR GKVP++ + YGK
Sbjct: 1 MEVKAKLLNTANAAAQTEVKASELNAKVENLAKKAAKNIKIDGFRKGKVPVAQVLKRYGK 60
Query: 61 SILSETIDEIIKEIVPEILS---KRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ ++ EI ++IV E L K+ P I E ++ + L
Sbjct: 61 DLENDAKSEIFRDIVNESLKLIAKKSSDIIGEPMI----------LKFDEKDGNIDIELE 110
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES-EIGDKVTVD 176
P++++ ++++ +V +KEI+ ++ E K E E ES E GD D
Sbjct: 111 ISFKPEVKVDGYEEIIPEYTTPKVTKKEIEEKINEFLKMIAPLEKVEKESLEKGDFAKFD 170
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
+ VD E + +GS + ++ LK G+ K++ FP +
Sbjct: 171 FEGFVDGEAFEGGKAEGYLLEIGSGQFIPGFEDGMLNLKVGEHKDVNVTFPPE 223
>gi|83754924|pdb|2D3O|1 Chain 1, Structure Of Ribosome Binding Domain Of The Trigger Factor
On The 50s Ribosomal Subunit From D. Radiodurans
Length = 112
Score = 93.9 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 11/117 (9%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSE 65
EG K E V +P+ + ++++ + + GFRPGK P I++ GK + S+
Sbjct: 6 SKEGNKVEFKVSVPAAEVNRAYDQVWAGLARDVRVPGFRPGKAPRKVIENRVGKGYVESQ 65
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
D +++ + L + ++ + ++ + + + P
Sbjct: 66 VRDRLLETHYSQGLRELGLNLV----------DATVDPQDVQSGQAFEFTVKGETYP 112
>gi|291320091|ref|YP_003515349.1| trigger factor [Mycoplasma agalactiae]
gi|290752420|emb|CBH40391.1| Trigger factor [Mycoplasma agalactiae]
Length = 500
Score = 93.9 bits (231), Expect = 5e-17, Method: Composition-based stats.
Identities = 72/487 (14%), Positives = 166/487 (34%), Gaps = 32/487 (6%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+ IE E ++ + T+ FN+ + K + GFRPGK P +
Sbjct: 4 KSIELNKEKGSVVVEYEFTGEKWTNIFNKTKSNKIKKLKVDGFRPGKAPKHIVDKYVTPV 63
Query: 61 SILSETIDEIIKEIVPEILSKRD--ERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
++ S++I E EI + A++ ++ + S +I+ L LS
Sbjct: 64 TVASDSIHEAYNVFADEIFEEVKKQHENALQNAVLLELPVLAEESSVIKIEFPLLPDLS- 122
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
I++ +V + + + + K+ ++++GD VT+ Y
Sbjct: 123 ----DIKLDESIKTKVAKLKVTEADIDSYLDELLSKNALLMPLGKKDKTKLGDVVTLKYK 178
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V+N E +GS + LVG G + E+ FPE +++ L G+
Sbjct: 179 GFVNNEPFEGGEADQFDLKLGSKTFIDTFEDQLVGKSVGWKGEVNVTFPESYAVPTLKGQ 238
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLG---FESESAMRGLCSQKIKQHSEFLVRQKVKR 295
I + + ++ L + + + + +++ V
Sbjct: 239 PAVFECEILDAKRLEKITLDEKNVKELHLPNVSTIEEAKAYAKEILTVKKYAEIQRNVID 298
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYH 351
++ + K+ F + + LV L++++ + + K + + + + +
Sbjct: 299 SLVAELVEKHQFAISDILVATGAQKRLEEIKANLKTQGIKFNDYLDLIKTSEADFNKLVL 358
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHE---KKMLDHFQKYP-- 406
K +V + ++ + E L+ F + +L + ++ P
Sbjct: 359 SEEKEVTKRLLVHEELMKQFKDKAEISEENKNLWAINIAFGQQFIPLQFVLQYMKQNPLA 418
Query: 407 ---NALAELRAPIFEDKVIDHILKSVQIVDRKVTFD------QLFDNSSESSPEKLLDKS 457
+ I E + IL + D+K + +L + + + E +
Sbjct: 419 EGEEQNGQFTEAIKEVAITRLILAQL---DKKTSEQNDKVALELANKLIKQAEEDIKKFE 475
Query: 458 SKVETFQ 464
+ +
Sbjct: 476 EEAKKIH 482
>gi|75766111|pdb|2AAR|7 Chain 7, Structure Of Trigger Factor Binding Domain In Biologically
Homologous Complex With Eubacterial Ribosome
Length = 113
Score = 93.5 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKS-ILSE 65
EG K E V +P+ + ++++ + + GFRPGK P I++ GK + S+
Sbjct: 5 SKEGNKVEFKVSVPAAEVNRAYDQVWAGLARDVRVPGFRPGKAPRKVIENRVGKGYVESQ 64
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQI 124
D +++ + L + ++ + ++ + + + P++
Sbjct: 65 VRDRLLETHYSQGLRELGLNLV----------DATVDPQDVQSGQAFEFTVKGETYPEV 113
>gi|323691608|ref|ZP_08105871.1| trigger factor [Clostridium symbiosum WAL-14673]
gi|323504334|gb|EGB20133.1| trigger factor [Clostridium symbiosum WAL-14673]
Length = 372
Score = 93.5 bits (230), Expect = 7e-17, Method: Composition-based stats.
Identities = 56/332 (16%), Positives = 125/332 (37%), Gaps = 15/332 (4%)
Query: 108 GTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES 167
Y I + + + VT V ++E+D Q+ ++ ++ + + E+
Sbjct: 39 EGETPAETEEYVAEGSITLGEYKGIPVTVTEPTVTDEEVDAQIQQLLNSSAEYLEVDREA 98
Query: 168 EIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFP 227
++GD+V +DY D V + + + ++GS LVG K G++ + FP
Sbjct: 99 QLGDQVNIDYKGMKDGVAFDGGTAEGYDLVLGSNSFIDGFESGLVGAKKGEEVTLNLTFP 158
Query: 228 EDHSI-KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQH 284
+ + DLAG+ V + V + +D ++ E + +R I +
Sbjct: 159 DPYQNNPDLAGQAVVFEVKVNNVKEKTVPELTDDFVAKVSPEDGTVEKLRENMKAFILEQ 218
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD---- 340
++ + + IL+ + +K V+ Y +Q + S
Sbjct: 219 KQYQIDNQRNTDILNAVIDKSEIVCATDDVDKNYETQVQYYTNQASMYGLDLATYASLMG 278
Query: 341 SIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLD 400
+E +A+ ++L I + NI VT+E+ ++ ++ L+
Sbjct: 279 MDEEGLKSELRNVARDMTKQEMLLKEIASRENITVTDEDREA----LAEQYGYDS---LE 331
Query: 401 HFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
F + + + K +D ++++ +I
Sbjct: 332 SFLETAD-KEIVDDTALMQKTLDFLVENAEIT 362
>gi|302847620|ref|XP_002955344.1| hypothetical protein VOLCADRAFT_96204 [Volvox carteri f.
nagariensis]
gi|300259416|gb|EFJ43644.1| hypothetical protein VOLCADRAFT_96204 [Volvox carteri f.
nagariensis]
Length = 616
Score = 93.5 bits (230), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/479 (12%), Positives = 151/479 (31%), Gaps = 58/479 (12%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKA--NIKGFRPGK-VPLSHIKSLY 58
V + +R++ + +P+ + D F ++ + N++G++ GK +PL + S
Sbjct: 118 SVSVEELSLCRRKVAITVPARAVKDVFKRGVKRLERDVIGNLRGWQAGKPLPLGMVISKV 177
Query: 59 GKS------ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL 112
G L E + E + V R R S+ + + + +
Sbjct: 178 GGQEKFKTFCLEELLLEALPRGVEAA---RQGRPVDPASVEVPSSDFPSMLERYDPATEF 234
Query: 113 KLRLSYDILPQIEISSFDD-LQVTQDICEVDEKEIDRQMAEIAKNNVAF----EVKETES 167
+D+ P + + + L VT + + I +
Sbjct: 235 SFNAHFDVAPPVVWAVPLEQLSVTIKDTGDFQTDAAAADDLIRQYRKQHGFSRVAAGRGL 294
Query: 168 EIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFP 227
+ GD + +D V ++ + + + T ++G+K G+ + + P
Sbjct: 295 QTGDTLVMDMEVRSESSGQPLPGLTHTRISFDTEQDVLGITSGMLGMKVGESRTFKMMMP 354
Query: 228 EDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGL----CSQKIKQ 283
ED+ ++ V + E+F N+ + + + + Q
Sbjct: 355 EDYEVEFWQNMPVVATVKVHEIFEWTLPEFNDAYVEQHHAGKWRSAAEMREALIASTAMQ 414
Query: 284 HSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEM-------------- 329
+ L +Q + + +VP +VE Q +M
Sbjct: 415 RLQQLDKQLEDAVVKAVADSLAIPEVPARMVEQLGERQFQAQLLQMIEDVGEGSGAHLTS 474
Query: 330 ------------------SSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKN 371
S + + + + E + + +V + + I
Sbjct: 475 PLLIKPSPHSTPPSQRIGSQEDIEKLATEEVAAEFIAQRRKDLEDQVKFNLAVDDIFVSR 534
Query: 372 NIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ 430
+E+ E +++ ++ + + + + L ++R + VI+ + +++
Sbjct: 535 GLELDEGAVEAEYDLRVRQM-----QAVGQPFEREELLEDVRETVKSVTVIEWLKDNIK 588
>gi|323482956|ref|ZP_08088354.1| trigger factor tig [Clostridium symbiosum WAL-14163]
gi|323403736|gb|EGA96036.1| trigger factor tig [Clostridium symbiosum WAL-14163]
Length = 372
Score = 93.2 bits (229), Expect = 8e-17, Method: Composition-based stats.
Identities = 57/332 (17%), Positives = 125/332 (37%), Gaps = 15/332 (4%)
Query: 108 GTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES 167
Y I + + + VT V ++E+D Q+ ++ ++ + + E+
Sbjct: 39 EGETPAETEEYVAEGSITLGEYKGIPVTVTEPTVTDEEVDAQIQQLLNSSAEYLEVDREA 98
Query: 168 EIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFP 227
++GD+V +DY D V + + + ++GS LVG K G++ + FP
Sbjct: 99 QLGDQVNIDYKGMKDGVAFDGGTAEGYDLVLGSNSFIDGFESGLVGAKKGEEVTLNLTFP 158
Query: 228 EDHSI-KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESAMRGLCSQKIKQH 284
+ + DLAG+ V + V + +D ++ E + +R I +
Sbjct: 159 DPYQNNPDLAGQAVVFEVKVNNVKEKTVPELTDDFVAKVSPEDGTVEKLRENMKAFILEQ 218
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD---- 340
++ + + IL+ + +K V+ Y +Q + S
Sbjct: 219 KQYQIDNQRNTDILNAVIDKSEIVCATDDVDKNYETQVQYYTNQASMYGLDLATYASLMG 278
Query: 341 SIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLD 400
+E +A+ ++L I + NI VT+E+ ++ R+ L+
Sbjct: 279 MDEEGLKSELRNVARDMTKQEMLLKEIASRENITVTDEDREA----LAERYGYDS---LE 331
Query: 401 HFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
F + + + K +D ++++ +I
Sbjct: 332 SFLETAD-KEIVDDTALMQKTLDFLVENAEIT 362
>gi|281500763|pdb|3GU0|A Chain A, Promiscuous Substrate Recognition In Folding And Assembly
Activities Of The Trigger Factor Chaperone
Length = 412
Score = 92.8 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 75/432 (17%), Positives = 180/432 (41%), Gaps = 28/432 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V E + + L+ + + + + ++ + + + I GFR G++P + +K G+
Sbjct: 1 MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPGFRKGRIPKNVLKMKLGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
T+D ++ +++P+ L R + P +T E + ++E + ++R+
Sbjct: 61 EFQEYTLDFLM-DLIPDTLKDRKL--ILSPIVTERELKDVTARVVVEVHEEPEVRIGDIS 117
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
++E + + EK ++R++ ++ +++ E KE +E GD V V+ V
Sbjct: 118 KIEVEKVDEEKV---------LEKYVERRIEDLRESHALLEPKEGPAEAGDLVRVNMEVY 168
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ + F + LVG K GD EIE ++ GKK
Sbjct: 169 NEEGKKLTSREYEYVISEDEDRPF---VKDLVGKKKGDVVEIE---------REYEGKKY 216
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++EV+ + ++LA FE+ ++ ++ K+ + +++ ++ Q+L
Sbjct: 217 TYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQLKESLKKEGKEIYDVEMKESMREQLL 276
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
+ + ++ + +E N + +++ E + +E+ + +
Sbjct: 277 EKLPEIVEIEISDRTLEILVNEAINRLKREGRYEQIV--SSYESEEKFREELKERILDDI 334
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
V+ + ++ I V +EE++ + + + + + ELR I +
Sbjct: 335 KRDRVIEVLAQEKGISVNDEELEKEAEELAPFWGISPDRAKSLVKARQDLREELRWAILK 394
Query: 419 DKVIDHILKSVQ 430
KV+D +L+ V+
Sbjct: 395 RKVLDLLLQEVE 406
>gi|115377523|ref|ZP_01464723.1| trigger factor [Stigmatella aurantiaca DW4/3-1]
gi|115365463|gb|EAU64498.1| trigger factor [Stigmatella aurantiaca DW4/3-1]
Length = 87
Score = 92.4 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 39/87 (44%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V + ++++L + + S R++D + + + GFR GKVP ++ + +
Sbjct: 1 MKVQVEELSPVEKKLSIEVDSTRVSDELTRAYTALGRQVKLPGFRQGKVPRRILEQRFRQ 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAA 87
+ + I +++ E + +
Sbjct: 61 QVEDDVIQRVVQSAYVEAVREHKVEVV 87
>gi|206602657|gb|EDZ39138.1| Probable trigger factor [Leptospirillum sp. Group II '5-way CG']
Length = 467
Score = 92.4 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 66/443 (14%), Positives = 140/443 (31%), Gaps = 27/443 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSL--Y 58
M V K G V + + +I+ + + + G+RPG VP S I+
Sbjct: 1 MDVQIKKGAGNLHAFTVDLSGEEIRTRVRGKIKAVNPRLKVPGYRPGHVPESMIRRNRDL 60
Query: 59 GKSILSETIDEIIKEIVPEILSKRDERAA-MRPSITINEGESDITSGLIEGTVDLKLRLS 117
+SI E +D+++ EI+ K + P+ E +S+ T IEG +++
Sbjct: 61 IRSIHQEVLDDLLDSAYSEIIKKSSGTVVHLNPAPVSLETKSEETGLTIEGELEI----- 115
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
++I +E + + I +N E I V +
Sbjct: 116 FEIPADRSPYGVVLSPEEALSVSEEEIATEIERLRIMMSNNFREDLPEAEHIQMSDFVRF 175
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ + + VG + + L+G K GD+ + S K
Sbjct: 176 KIHFVHPSTGETFDSEQVSEVGGDGVPEAFNQALLGKKRGDRVQTTLPLNVPVSGKGGGT 235
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
+ ++ + + + + F + ++ E + + +
Sbjct: 236 RVETHPAELEVLDIQRRIPLEIGELIARVFPNSEEGEVKTESDLRSDVEKGLLGQKVLGV 295
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRR 357
L ++ + ++ +K S + D ++
Sbjct: 296 LRKKRE----ELRKEILATWGVATPEKRMAREYQRLSLSSDAD----------REEYRQI 341
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
L +VL + E+ IE E + Q + + +D AL+
Sbjct: 342 FLWQLVLDQLAEREKIEPDWETVGQEYRQIMQSRGEAPSREVDR-----EALSIAMQGAR 396
Query: 418 EDKVIDHILKSVQIVDRKVTFDQ 440
K+ + +L+ Q + + FD+
Sbjct: 397 RIKLEEMMLRQAQFGGQDLFFDE 419
>gi|313678287|ref|YP_004056027.1| trigger factor [Mycoplasma bovis PG45]
gi|312950129|gb|ADR24724.1| trigger factor [Mycoplasma bovis PG45]
Length = 501
Score = 92.0 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 73/480 (15%), Positives = 166/480 (34%), Gaps = 24/480 (5%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK- 60
+ IE E ++ + T+ FN+ + K + GFRPGK P +
Sbjct: 4 KSIELNKEKGSVVVEYEFSGEKWTNIFNKTKTNKIKKLKVDGFRPGKAPKHIVDKYVTPV 63
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
++ S++I+E EI + ++ ++ N ++ E +V
Sbjct: 64 AVASDSINEAYNVFADEIFEEVKKQ---HENVLQNAVLLELPVLAEESSVIKIEFPLLPD 120
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
L I++ +V++ + + V K+ ++++GD VT+ Y
Sbjct: 121 LSNIKLDESIKTKVSKLKVTEADIDEYLNQLLSKNALVLPLDKKDKTKLGDVVTLKYKGF 180
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
V+N + + +GS + LVG G + E+ FPE++++ L G+
Sbjct: 181 VNNEPFDGGEADSFDLKLGSKTFIDTFEDQLVGKTVGWKGEVNVTFPENYAVPTLKGQPA 240
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRG---LCSQKIKQHSEFLVRQKVKRQI 297
I + + ++ L + S + + + + ++V +
Sbjct: 241 VFECEILDAKRLEEIKPTDENVKELHLPNVSNLEEAKSYAKEILTVKKYSEIHRQVIDSL 300
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHML 353
+D + K+ F V + LV L++++ + K + + + +
Sbjct: 301 VDELVEKHQFAVSDILVTQGAQKRLEEIKANLKQQGIKFNEYLDLIKTSEADFNKLVLSE 360
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHE---KKMLDHFQKYP---- 406
K +V + ++ + E L+ F +L + ++ P
Sbjct: 361 EKVLTKRLLVHEELMKQFKDKAEISEDNKHLWAINVAFGQQFVPLPFVLQYMKQNPLSDE 420
Query: 407 -----NALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVE 461
++ ++ H+ K V + KV +L E + + + K +
Sbjct: 421 EGKENQFTEAVKEVAVTRLILAHLDKKVADHNDKVAL-ELAKKLIEQAEKDVQQYEEKAK 479
>gi|210614806|ref|ZP_03290335.1| hypothetical protein CLONEX_02549 [Clostridium nexile DSM 1787]
gi|210150575|gb|EEA81584.1| hypothetical protein CLONEX_02549 [Clostridium nexile DSM 1787]
Length = 346
Score = 92.0 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 120/283 (42%), Gaps = 6/283 (2%)
Query: 154 AKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVG 213
+ ++ + ++ GD VT+DY D V + + ++ Q +GS + +VG
Sbjct: 63 QTKSTQNDITDRPAQEGDVVTIDYEGKKDGVAFDGGTAQDQQLELGSGSFIDGFEDGIVG 122
Query: 214 LKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESES 271
G+ ++ FPED+ +DLAG+ V ++ ++ + + ++L ++
Sbjct: 123 HNIGETFDLNLTFPEDYKSEDLAGQAVVFTVTLDKISEVIVPELTDELVAELSESAKTIE 182
Query: 272 AMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSS 331
+ + ++ ++ + ++ + D + + T + + E + ++S
Sbjct: 183 DYKKEVKEDLETSNKQAAESEQQQNVWDALMEQCTVEKYPKDKKQETIDNITTQYGSIAS 242
Query: 332 ANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF 391
+++ ++A+ + + I EK N++V++EE + L + ++
Sbjct: 243 MYGMDDVDTFLEQAFGVTSEVMAENIIKQEYAVDLIAEKENLKVSDEEYKKGLEEYATQY 302
Query: 392 PGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDR 434
+ L+ E++ + +DKV D ++ + ++V++
Sbjct: 303 GYTDSAELE----DAVGKKEVKRALLQDKVTDWLVDNCKLVEK 341
>gi|302388395|ref|YP_003824217.1| trigger factor [Clostridium saccharolyticum WM1]
gi|302199023|gb|ADL06594.1| trigger factor [Clostridium saccharolyticum WM1]
Length = 367
Score = 92.0 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 63/311 (20%), Positives = 131/311 (42%), Gaps = 14/311 (4%)
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
+ ++V++D EV + E+++ + + + + GD V +DY + D V +
Sbjct: 65 EYKGIEVSKDSVEVTDDEVNQAVQSDLSAHAKDAEVDRAVQNGDVVNIDYVGTKDGVAFD 124
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ + +GS E LVG K GD+K + FPE + DLAGK V + ++
Sbjct: 125 GGTAQGYDLTIGSGQFIEGFEEGLVGAKKGDKKTLNLTFPEGYQNADLAGKAVVFDVTVN 184
Query: 248 EVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYT 306
V +N+ F++ + + Q + ++ QK+K I I N
Sbjct: 185 AVKEEQVPELNDAFVQENTSFKTVAEYKEDKMQTLLKNKSDEAEQKMKSDIYTAILNASK 244
Query: 307 FDVPESLVENEYNGILQKVRFEMSSANQKSQNVD-----SIDEEDLQYYHMLAKRRVLTG 361
+ + V+ +N ++ + + ++ + +EE + A+ V
Sbjct: 245 VEPKQEAVDANFNNLIARYSNQAAAYGMDFKTFVGAFSGMGEEEFKEILKTQAEATVEQR 304
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+V+ I EK I++T+E+ + + Q+G KM++ ++ ++ I +KV
Sbjct: 305 LVVSAIAEKEGIQITDED-RKEVADQMG--YESVDKMIETAGQF-----DVDDYIMNNKV 356
Query: 422 IDHILKSVQIV 432
+D + + I
Sbjct: 357 MDFLTEKAVIK 367
>gi|169350653|ref|ZP_02867591.1| hypothetical protein CLOSPI_01426 [Clostridium spiroforme DSM 1552]
gi|169292516|gb|EDS74649.1| hypothetical protein CLOSPI_01426 [Clostridium spiroforme DSM 1552]
Length = 316
Score = 91.2 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/317 (17%), Positives = 130/317 (41%), Gaps = 12/317 (3%)
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
++ + +++ V ++EI+ Q+ I N E K E GD T+D+ D
Sbjct: 5 NKLGQYKGVEIKVTKQTVTQEEIEAQLNAIVTQNPILEEKNGEVAKGDLTTIDFEGFKDG 64
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
E S K + +GS + ++G+K G+ +++ FP+++ + DLAG V
Sbjct: 65 AAFEGGSAKGHKLEIGSNQFIPGFEDQMIGMKQGETRDLNLTFPQNYGVSDLAGADVVFK 124
Query: 244 FSIKEVFSPLPVVVNNDLAVR---LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++ ++ + +N++ E+ + I+ H + + + + D
Sbjct: 125 VTVHKIETKKDATLNDEFVAGLNIPSIETVEQLHESVKANIQNHHDQTYQGQKENAAFDQ 184
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKR 356
+ + ++ E ++ ++ V+ +++ + + + E + AK+
Sbjct: 185 VLSNSEVEISEDDLQKAIEKYIEHVKMQLAQQGMQLEQYLQMMNMDHETFKKQIEPSAKQ 244
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ ++ I + NI+ T+EE+Q L + ++++L H + LR
Sbjct: 245 QATFEAIIDEIVKLENIQTTDEEVQQQLEKIALYNNTSKEEVLKHVEP-----ENLRNDF 299
Query: 417 FEDKVIDHILKSVQIVD 433
K I++S +++
Sbjct: 300 NRVKASQLIIESAVVIE 316
>gi|206895707|ref|YP_002247152.1| trigger factor [Coprothermobacter proteolyticus DSM 5265]
gi|206738324|gb|ACI17402.1| trigger factor [Coprothermobacter proteolyticus DSM 5265]
Length = 399
Score = 90.8 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 63/417 (15%), Positives = 166/417 (39%), Gaps = 33/417 (7%)
Query: 7 FSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSE- 65
++ ++ + + N+ +E + I GFR GK P++ +++ +S L E
Sbjct: 5 KISSVEVSVEETYEGEQFQNIENKTLEKLARSVQIPGFRKGKAPVNLVRNYVNQSYLQEM 64
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
+DEI+ +++ + S+ + + + E + I+ ++L + +D + +
Sbjct: 65 LVDEIVDDVLRSVASELEAPVY---KVHVKESSIEEQKAYIKMVIELLPQPRFDDIDFSK 121
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ +++ +VT++ E + E + EV++ E ++ N +
Sbjct: 122 LPPYEEPKVTEEEIEDVVDH----LLEDQSVIRSVEVEKPEDGYLAEIEWALLDEQGNPL 177
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ +G + T ++L + G++K + E ++
Sbjct: 178 ----KPRRTTIEIGKEEFLEGTDDLLKSMTVGEEKTMATPDGE-----------SQIRIK 222
Query: 246 IKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
+ ++ + + ++LA LGFE+ +R ++I+++ + +LD I+ +
Sbjct: 223 LLDIKGKVKPELTDELAADLGFENVENLRKAAEEEIRRYKLDQYVDEWLNNVLDDIAEQL 282
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLAKRRVLTG 361
+P S++E+EY ++ + ++ ++ +E L + +
Sbjct: 283 EIQLPPSMIEDEYEHRYEEFINMLENSGLNLESYASQVQKTPDEVLTEIRENVTKSLKRY 342
Query: 362 IVLGTIGEKNNIEVTEEEMQSA------LYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
VL + IE E E+ + +Q R+ +K+++ ++ +A E+
Sbjct: 343 FVLEFLKSALGIEADEAEVNEYLKTRQGINRQEARYNVELEKLIEVLKEKVSANKEV 399
>gi|167756590|ref|ZP_02428717.1| hypothetical protein CLORAM_02127 [Clostridium ramosum DSM 1402]
gi|237733880|ref|ZP_04564361.1| trigger factor [Mollicutes bacterium D7]
gi|167702765|gb|EDS17344.1| hypothetical protein CLORAM_02127 [Clostridium ramosum DSM 1402]
gi|229382961|gb|EEO33052.1| trigger factor [Coprobacillus sp. D7]
Length = 317
Score = 90.8 bits (223), Expect = 5e-16, Method: Composition-based stats.
Identities = 55/318 (17%), Positives = 123/318 (38%), Gaps = 12/318 (3%)
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDN 183
I++ ++ ++ V + E+D ++ + + + K+ + GD T+D+ D
Sbjct: 5 IKLGNYKGIEAEVTKQPVADTEVDNEIQRLVAQSTSLIEKDGDVTNGDVTTIDFEGFKDE 64
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
V + + Q +GS E ++G+K G+ +E+ FPE++ DLAG V
Sbjct: 65 VAFDGGKAEGFQLEIGSGQFIPGFEEQMIGMKKGETRELNLTFPENYGAADLAGADVVFK 124
Query: 244 FSIKEVFSPLPVVVNNDLAV---RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
++ ++ +N+ G E+ +R ++ E + L
Sbjct: 125 VTVHKIEEKKEAELNDAFVASLNAPGIETIDQLRDNIKASLEAQHEQAFMAAKENAALGK 184
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHMLAKR 356
+ + +V ES +E LQ + E++S + + + E LQ AK+
Sbjct: 185 LIDDCEVEVEESDIEKALQQQLQHISMELASQGMQLEQYLQMMGMNQETLLQQLAPSAKQ 244
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ ++ I N+E ++EE + ++ +L+ + L+ +
Sbjct: 245 QATFEAIIDEIVAIENLETSDEEANQQVEAIAAHNQVSKEDVLNQID-----IESLKRDL 299
Query: 417 FEDKVIDHILKSVQIVDR 434
K I+ + ++
Sbjct: 300 NRIKASRLIMDNTVFIEV 317
>gi|332296029|ref|YP_004437952.1| trigger factor [Thermodesulfobium narugense DSM 14796]
gi|332179132|gb|AEE14821.1| trigger factor [Thermodesulfobium narugense DSM 14796]
Length = 450
Score = 90.5 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 73/474 (15%), Positives = 173/474 (36%), Gaps = 33/474 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + + K E DVI P + + +N+ I S+ NI GFR GKVP + ++ +
Sbjct: 1 MNYSKTYESSTKVEFDVIFPKEEIENEWNQTFNLIASRTNIAGFRRGKVPRNILEKVIRD 60
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I+ + ++++ +I ++ + I+ + + ++ ++
Sbjct: 61 EDIIENLKEVLLRKTFNKIRDEQGDENLYN--------IFKEDESEIQKDKEYRFKMVFE 112
Query: 120 ILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD---KVTVD 176
P E+ + +++ + V ++EI+ Q+ I ++ + E ++T++
Sbjct: 113 YWPDPELGDYRSIKIKANEVSVSDEEIENQLNLILQSFAKWNNVEDGEIQLKDVVEITME 172
Query: 177 YTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+ + E K + D + L+G K GD+ E + +L
Sbjct: 173 TRDENNEEVKEYTGKSAISINPDIKDRLKPLRDALLGKKVGDEVECDI---------ELE 223
Query: 237 GKKVRLNFSIKEVFSPLPVVVNN-DLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
K+ + + + ++ DL ES ++ + + + K
Sbjct: 224 SKRAHVKAKVDSIRRKELSNWSDIDLQANFQVESLEELKEQQKSILLMNKLQQEIENQKN 283
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV---DSIDEEDLQYYHM 352
+IL+ I +PE+ ++ E + + + S + + +S +E ++ M
Sbjct: 284 EILEKIREISKIYIPETALQLEKQQYINDLEKRIKSRQVSKEEINALNSGKDEFSKFADM 343
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPG-HEKKMLDHFQKYPNALAE 411
K+ + +++ I + I V + E++ L K + + +
Sbjct: 344 TVKKSIEDLLIIEKISKDLGIVVEDAEIEQRLRAYRKDLGEADLNKWIQDLKNDKRTWGQ 403
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
L A + ++V +L + D++ ++S E S S
Sbjct: 404 LIADVRRERVFSALLTMCVEREE-------RDDTKQNSEETKQGAESLESEKNS 450
>gi|296127042|ref|YP_003634294.1| trigger factor domain protein [Brachyspira murdochii DSM 12563]
gi|296018858|gb|ADG72095.1| trigger factor domain protein [Brachyspira murdochii DSM 12563]
Length = 436
Score = 90.1 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 59/431 (13%), Positives = 156/431 (36%), Gaps = 37/431 (8%)
Query: 13 RELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIK 72
L +++ + ++IE + + N+KGFR G P + I S Y +++ + +I+
Sbjct: 18 VTLKLVVSKDAYNKELEKQIEYYKPRVNVKGFRVGHAPNNIILSRYREALEGAANEVLIE 77
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDL 132
+ +++ +A P + E + D L L Y +P+ ++ +
Sbjct: 78 DAWNTYHDEKNVKALGTPKLLNLENKDD----------GLHLTYEYYPIPEFDLPDLSSI 127
Query: 133 QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKK 192
V ++ VD+ ++ + F+ E +SEIGD+V V +D K
Sbjct: 128 SVEKNKYTVDDSVVEEAYKLSLQRFAHFDESELKSEIGDRVYVKIE-------FDDDENK 180
Query: 193 NVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSP 252
+ E I G +K+ ++ ++ I +
Sbjct: 181 KYNKELTVVASDDENDSIFAKNAVGVKKDDKKLLKTYVDGRE--------ATLIMNIVKV 232
Query: 253 LPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPES 312
+ +D + + +++ ++ + + + V + + + +P+
Sbjct: 233 EKPDMKDDSNEEDRQKVKESLKDHLIKRAE---DRANSELVNDTLFNKLIELVNMTLPKG 289
Query: 313 LVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLAKRRVLTGIVLGTIG 368
E + L + MSS + D++ + Y ++++ +++ +
Sbjct: 290 YYEEQLESSLNEFDRSMSSRGMSKTDFLISVAKTDDDIRKEYEENVRKQITFDMIMAKLA 349
Query: 369 EKNN--IEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKY--PNALAELRAPIFEDKVID 423
+ I V E++ + + + K+ Q+ + + + + ++D
Sbjct: 350 DTYKDSITVNEDKAKEYANRMYQYQSYMGLAKLPKEEQQNIINYIMRDAQTRATSEAILD 409
Query: 424 HILKSVQIVDR 434
++ + VQ+ ++
Sbjct: 410 YVKEHVQVSEK 420
>gi|331002778|ref|ZP_08326292.1| trigger factor tig [Lachnospiraceae oral taxon 107 str. F0167]
gi|330413267|gb|EGG92635.1| trigger factor tig [Lachnospiraceae oral taxon 107 str. F0167]
Length = 389
Score = 89.7 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 51/348 (14%), Positives = 129/348 (37%), Gaps = 17/348 (4%)
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTV 179
E+ ++ +++ V + +++ Q+ + EV + + GD V +DY
Sbjct: 49 YGSAELGTYKGVEIPNIDISVSDADVESQINTELLQDPDVAEVTDRAVQEGDTVNIDYVG 108
Query: 180 SVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
+ D V + + ++GS L+G G+ +++ FP+D+ ++LAG
Sbjct: 109 TKDGVAFDGGTASGYDLVIGSHTFIEGFESGLIGHNIGEDVKLDLTFPKDYGNEELAGAA 168
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRLG---FESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
V + I ++ P + ++ R + A + L +++ + + +
Sbjct: 169 VVFDVKINKISVSTPAALTDEWVNRHTNGAQTTVDAYKALVRTNLEEQRKKSAESQDQYN 228
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID----EEDLQYYHM 352
L F + ++ +E EYN + + ++ N + +
Sbjct: 229 ALTAAVQNAKFKMNDAAIEYEYNNSFKPIEAMLTQYNMTLDDYAKAYGMTGDGLKTELRN 288
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ V I++ + +K + +T+ + Q + G + +K +
Sbjct: 289 QAENFVKQTILIREVYKKEKMSLTDADYQLIVDMNGGTMTKD-----ELIKKNGQ--DNV 341
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTF--DQLFDNSSESSPEKLLDKSS 458
KV++ ++++ + D V+ + L ES+ + +
Sbjct: 342 DEIAKAYKVVNFLVENAKRSDVTVSITGETLSGGEGESTTAESSKAAQ 389
>gi|195952529|ref|YP_002120819.1| trigger factor domain [Hydrogenobaculum sp. Y04AAS1]
gi|195932141|gb|ACG56841.1| trigger factor domain [Hydrogenobaculum sp. Y04AAS1]
Length = 456
Score = 88.9 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 69/465 (14%), Positives = 169/465 (36%), Gaps = 29/465 (6%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M EG+ R+ + L ++ + ++++ A + GFR GK P IKS +
Sbjct: 1 MAFTITKEEGIFRDFAFDVEGKELEQTYRTILNELKTNAEVDGFRKGKAPEWIIKSKFKN 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I ++ ++++ + E I IN S + ++ T++ + +
Sbjct: 61 YI----LEALVEDFAKKAYESAKEMGFDVMDIKINLENSKFSEKEMKLTME-GYIEIFPV 115
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
+ ++ F+ +++ E+ ++ +++ + ++ E K+ E D V +DYTV
Sbjct: 116 IESGKLKDFESVELEIPSFELTDEMVEQTIKYALEDKATLEPKDGPIEEDDYVVIDYTVV 175
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ K + + + ++G K D ++E ++ +D KV
Sbjct: 176 DKQDGEKVNQKLSGILKELGLR--EDLYKEILGKKEQDVIKLENVPIQE--TEDENTPKV 231
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDY 300
+ I+ V + ++LA L +K Q +++ K + L
Sbjct: 232 DIEAKIESVKKKAYPELTDELAKELNLGENVQEARENIKKRLQTYLENKKEEAKIEALTK 291
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
+ D+ E E++ N +E + +
Sbjct: 292 YLLEEYKDITEVSRTEAIRIANLVYEEELNRLNNMFDLSSFDEETLKVIEKSAYDKSIKE 351
Query: 361 GI-------VLGTIGEKNNIEVTEEEMQSALYQQLGRFPG-------------HEKKMLD 400
GI + + +K IE+T+E+++ + +Q+ + ++ ++
Sbjct: 352 GITSAKTRSIFVSYAKKFGIELTDEDIKKYIDEQVEAYKDMLPEHQKDEESLKRLRENIE 411
Query: 401 HFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ + + L I K +D +L+ V+ + ++ +
Sbjct: 412 NYFLREDRKSVLIKDILASKAMDKLLEMVKFKENTSLKEENVEQP 456
>gi|150020875|ref|YP_001306229.1| trigger factor domain-containing protein [Thermosipho melanesiensis
BI429]
gi|149793396|gb|ABR30844.1| trigger factor, C-terminal domain protein [Thermosipho
melanesiensis BI429]
Length = 435
Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 66/443 (14%), Positives = 164/443 (37%), Gaps = 20/443 (4%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M++ E + + + S + + + ++ K I+GFR GKVPL+ K +G+
Sbjct: 1 MEIKELGVDKNIVTKEYLFDSTDIKVAERRTLNELNRKYTIEGFRKGKVPLNVFKMRFGR 60
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ E + + V + + P I E D ++ +++
Sbjct: 61 DFYDYFVFEQLVDQVYKSFKDES-NLLLIPEIVEKEVTEDKG----------RIVVNFHK 109
Query: 121 LPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVS 180
P +++ + +V +D ++ + + + + K+ ++E D V V ++
Sbjct: 110 KPVAKVNVESIKVRVANKGQVLSNYLDLRLKSLQEEHAILDPKDGQAEYEDLVRVKVYIT 169
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKV 240
+ K ++++ D T + ++G K GD E + ++ + KD
Sbjct: 170 NKDSGKVLIDGKEDEYVLYKEDERP-TVQNVIGHKKGDVVEFD----KEFTGKDGEKVVY 224
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV----RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
I EV+ + ++ L E+ ++ ++ + + ++ ++ Q
Sbjct: 225 HYKLEILEVYKRNLPEITDEFVKDNLTELHLETLDELKNKIMEEGTKIYDNEIKNSIREQ 284
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
IL +S + E ++ I+ ++ E + + + + + +
Sbjct: 285 ILAQLSEVTELFISEKTIDYAVRLIVNNMKEENKYEEYVKKYENEEKALESLKEYYVNEL 344
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ + I K + T+EE++ + ++ ++ + E+ I
Sbjct: 345 KKESAIEKLAKEYKIEEKATDEELEKYAEMLAPYWGISVERAKVLVKERNDIRNEVENMI 404
Query: 417 FEDKVIDHILKSVQIVDRKVTFD 439
F DKV+D + + VQ V +
Sbjct: 405 FVDKVLDKVAEKVQREIVDVNKE 427
>gi|227873129|ref|ZP_03991421.1| cell division trigger factor [Oribacterium sinus F0268]
gi|227841023|gb|EEJ51361.1| cell division trigger factor [Oribacterium sinus F0268]
Length = 451
Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 60/384 (15%), Positives = 139/384 (36%), Gaps = 19/384 (4%)
Query: 91 SITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQM 150
++ + D T+ + + I I + VT E +E
Sbjct: 38 EVSSSTLTEDSPEIKELETLKVPAEPKLSEMGSITIPDLKSITVTVAPLENVTQEEVDN- 96
Query: 151 AEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEI 210
A + V + ++ GD V +DY+ S+D + + + +GS +
Sbjct: 97 AIQQTLDQNPTVVDDAAKEGDTVNIDYSGSIDGKKFDGGTAEKQDLKLGSGQFIPGFEDQ 156
Query: 211 LVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF--- 267
L+G K G+ ++ FPE + ++LAGK I EV P + ++
Sbjct: 157 LIGKKAGEDVTVKVTFPESYGNEELAGKNAEFAVKIHEVK--RPATLTDEWVKNYDGTTA 214
Query: 268 ESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRF 327
E+ + R ++++ +F ++ Q L IS K T E L+E +L
Sbjct: 215 ETVESYRDQVREQLQARKDFNYHSNIQDQALQAISEKTTVKPSEKLMEYAKAYLLDATLK 274
Query: 328 EMSSANQKSQNVDSID----EEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSA 383
+M S ++ ++ +E + + A+ ++ + + I+VT+ +
Sbjct: 275 QMKSYGLSVADIINMSGKTVKEYKEDAYAKAEDYAKQLFLMRKLADDQGIKVTDALLDEL 334
Query: 384 LYQQLGRFPGHEKKM--LDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQL 441
+ ++ ++ + K + +KV+++I + + + + + +
Sbjct: 335 AEAESSLTGEKTNRVKLIEQYGK-----ELVEEAAIRNKVMEYIESQITVKNEEPSV--I 387
Query: 442 FDNSSESSPEKLLDKSSKVETFQS 465
+ S+ E ++ +
Sbjct: 388 MEQDSDKGKESKASEAETEAAKEQ 411
>gi|239628729|ref|ZP_04671760.1| trigger factor [Clostridiales bacterium 1_7_47_FAA]
gi|239518875|gb|EEQ58741.1| trigger factor [Clostridiales bacterium 1_7_47FAA]
Length = 415
Score = 88.5 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/316 (16%), Positives = 120/316 (37%), Gaps = 14/316 (4%)
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
+ L +E+ + ++V V + E+D ++ ++ N + + GD V +DY
Sbjct: 19 ENLGTVELGEYKGVKVNMPEVLVTDAEVDSRINQVLSQNPKETEVDRPAAEGDVVNIDYV 78
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
+ D V E S + +GS + L+G K GD+KE+ FPE + K LAG+
Sbjct: 79 GTKDGVEFEGGSAEGFDLTLGSGSFIEGFEDGLIGAKKGDKKELNLTFPETYQEKSLAGQ 138
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V ++ V V++++ +++ + + + + ++V+ +
Sbjct: 139 PVVFTVTVNAVKEKTDAVLDDEFVQGVSDYKTVDEYKESIRADLLKQKKQAADRQVQTSV 198
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHML 353
L + TF + ++ V YN L++ + + + D + +
Sbjct: 199 LQQVVADSTFKLNKNAVSKRYNTRLKQYEQQAKMYGSSLAGMAQANGMDVPGLQEAIYAS 258
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
K V +V+ TI E+ + + + + ++ + ++ +
Sbjct: 259 VKDDVKNQLVINTIAEREGLVLEDADREAF----AESNGQTVDAAVSYYGQ-----ETFD 309
Query: 414 APIFEDKVIDHILKSV 429
KV+ + +
Sbjct: 310 EMALNYKVMKFMADNA 325
>gi|225621122|ref|YP_002722380.1| trigger factor [Brachyspira hyodysenteriae WA1]
gi|225215942|gb|ACN84676.1| trigger factor [Brachyspira hyodysenteriae WA1]
Length = 436
Score = 87.8 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 58/431 (13%), Positives = 154/431 (35%), Gaps = 37/431 (8%)
Query: 13 RELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIK 72
L + I + ++IE + + N+KGFR G P + I S Y +++ T + +I+
Sbjct: 18 VTLKITISKDAYDKELEKQIEYYKPRVNVKGFRVGHAPNNIILSRYREALEGATNEVLIE 77
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDL 132
+ +++ +A P + L + L L Y +P+ ++ +
Sbjct: 78 DAWNTYHDEKNVKALGTPKL----------LNLDKKDDGLHLDYEYYPIPEFDLPDLASI 127
Query: 133 QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKK 192
V ++ +D+ ++ + FE + +SE+GD+V V +D K
Sbjct: 128 NVEKNKYIIDDNVVEEAYKLSLQRFSHFEESDLKSELGDRVFVKIE-------FDDDENK 180
Query: 193 NVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSP 252
+ E I G +K+ ++ ++ I +
Sbjct: 181 KYDKELTVVASDDENESIFAKNAVGVKKDDKKLLKTFVDGRE--------ATLIMNIVKV 232
Query: 253 LPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPES 312
+ +D + + +++ +++ + + + + + + + +P+
Sbjct: 233 EKPDMKDDSKEEDRQKVKESLKEHLAKRAE---DRANSELINDTLFNKLIELVNITLPKG 289
Query: 313 LVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLAKRRVLTGIVLGTIG 368
E + L + MSS + D++ + Y ++++ +++ +
Sbjct: 290 YFEEQLEISLNEFDRSMSSRGMSKTDFLISVAKTDDDIKKEYEENVRKQITFDMIMAKLS 349
Query: 369 EKNN--IEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKY--PNALAELRAPIFEDKVID 423
E I V EE+ + + + K+ Q+ + + + ++D
Sbjct: 350 ETYKDSITVNEEKAKEYANRMYQYQSYMGLSKLPKEEQQNIVNYIMRDAHTRATSEAIMD 409
Query: 424 HILKSVQIVDR 434
++ + V + ++
Sbjct: 410 YVKEHVNVSEK 420
>gi|27262194|gb|AAN87378.1| trigger factor PPIase [Heliobacillus mobilis]
Length = 264
Score = 87.8 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 101/264 (38%), Gaps = 6/264 (2%)
Query: 175 VDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
+++ E ++ +GS E L+G K G+ +++ FP ++ +K
Sbjct: 1 MNFERFKMTTPFEGGKGEDYPLELGSNTFIPGFEEALIGAKVGENRDLNITFPAEYHVKT 60
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKV 293
LAG+ +KE+ ++++ A F+S ++ + +++ +E Q
Sbjct: 61 LAGQPAVFKTVVKEIKRKEYAAIDDEFAKDVSDFDSLDELKADIRKNLEESAEKTREQAK 120
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN----QKSQNVDSIDEEDLQY 349
+ +L+ + DVP+ +V+ +L+ + Q + E+
Sbjct: 121 QNDVLEKVVANAELDVPQVMVDKRVEQLLEDYGQRLQYQGLSLDQFVEMTGQSKEDLKTQ 180
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ + V +VL + + + VTEEE+ + + + +
Sbjct: 181 FVPEGLKSVKQELVLEAVAKAEALTVTEEEVDEEIETMANNYK-QPAATIKKMLLSRGQI 239
Query: 410 AELRAPIFEDKVIDHILKSVQIVD 433
L+ I DK + ++++ V+
Sbjct: 240 DNLKQSILLDKTVKFLVENANFVE 263
>gi|154249787|ref|YP_001410612.1| trigger factor domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153723|gb|ABS60955.1| trigger factor domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 433
Score = 87.8 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 67/444 (15%), Positives = 166/444 (37%), Gaps = 23/444 (5%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDI-RSKANIKGFRPGKVPLSHIKSLYG 59
MQ+ E + + I +N + ++ + + I+GFR G+VP K
Sbjct: 1 MQINELEKDKNVIVKEYIFDANDVKRLEDKAVNSLNSKGYQIEGFRVGRVPKEIYKLRLK 60
Query: 60 KSILS-ETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
+ + DE I E+ E L K + + P I +++ + +
Sbjct: 61 DAFYNIYVADEAIIEVEDE-LDKENISVVIPPVIVDARFDANGGKVV----------VEL 109
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
+ P++ EV E ++ ++ + + E KE E++ GD V V T
Sbjct: 110 HLEPEVTFDPSKIKVRKAKEDEVLESYVEMRVKYMLDEHAVLEPKEGEAQEGDVVKVKET 169
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
V ++ + D ++ + + + L G K GD E E + +
Sbjct: 170 VLLNEKAIRDHEEREYLLLKDDER---DAVKQLYGKKKGDTVEFE----KTFEKSENEKI 222
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ ++E+++ + V+N++ L E+ + +K + + + +++
Sbjct: 223 TYKYILEVEEIYNRILPVLNDEFVKSLAIENVETL-EGLKEKFRNEGKEIYDRELGDSYR 281
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI--DEEDLQYYHMLAKR 356
I ++ + E ++ + + + + S +E+ ++ +
Sbjct: 282 MQIIDQIPSATEIDISEKTIQRAVENIIDNLKEEGKYDDYIKSYGSEEKLVEEFKNYYIN 341
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ +V+ + E+N+++V +E++++ + + + + E+ I
Sbjct: 342 LIKKDLVVKKLAEENDVKVNDEDIKAYAEIVSVEWGVSPDRAEALIKSRIDLRNEVIMDI 401
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQ 440
E KV + ++ VQ+ + D+
Sbjct: 402 VESKVANLLIDKVQVEEVSFNKDE 425
>gi|315652687|ref|ZP_07905662.1| trigger factor [Eubacterium saburreum DSM 3986]
gi|315485065|gb|EFU75472.1| trigger factor [Eubacterium saburreum DSM 3986]
Length = 387
Score = 87.8 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 56/357 (15%), Positives = 136/357 (38%), Gaps = 25/357 (7%)
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSV 181
+++ ++ +++ V ++E++ Q+ + + E + + GD V +DYT +
Sbjct: 45 SVKLGNYIGVEIPNIDTTVSDQEVESQINTELQQDPDKENITDRAVQEGDTVNIDYTGTK 104
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
D V + S K ++GS + LVG G+ ++ FP D++ KDLAG V
Sbjct: 105 DGVAFDGGSAKGYDLVIGSKNFIDGFESGLVGHNIGENVQLNLTFPSDYNNKDLAGAAVV 164
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLG---FESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ I + P + ++ R ++ + +K++ + +Q+ + L
Sbjct: 165 FDVKINSISVSKPATLTDEWVSRHTNNAQKTVDEYKAEVRKKLEDQKKKSAKQQDEYNAL 224
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLA 354
+ T+ + + ++ EY+ ++ + +S +E + A
Sbjct: 225 TAVIKDSTYKLNDKAIDYEYDISMEPINSMISQYGMTMAQYAQAYGTDEEGLKKQIREQA 284
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
+ V + L TI +K + + +E+ Q + + + +++ + K +
Sbjct: 285 ENVVKQEVTLNTIYKKEKMSLKDEDYQKVI--EASGLTISKDELIKQYGKDK-----VEE 337
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ KV+ +++ + V + E + S + SE
Sbjct: 338 AVKSYKVVSFLVEKAKRSAATVNV----------NGETISGAESSTSAESTTAQSSE 384
>gi|160935140|ref|ZP_02082523.1| hypothetical protein CLOBOL_00035 [Clostridium bolteae ATCC
BAA-613]
gi|158441871|gb|EDP19568.1| hypothetical protein CLOBOL_00035 [Clostridium bolteae ATCC
BAA-613]
Length = 399
Score = 87.0 bits (213), Expect = 7e-15, Method: Composition-based stats.
Identities = 53/316 (16%), Positives = 123/316 (38%), Gaps = 14/316 (4%)
Query: 119 DILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT 178
+ L +E+S + ++V V + E++ ++ ++ N E + + GD V +DY
Sbjct: 30 ENLGTVELSEYKGVKVNVPAVMVTDAEVESKINQVLSQNPKIEEVDRPAAEGDIVNIDYV 89
Query: 179 VSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK 238
D V + + +GS + + L+G K GD+KE+ FPED+S K LAG+
Sbjct: 90 GKQDGVEFAGGTGEGQDLTLGSGRMIDGFEDGLIGTKKGDKKELNLTFPEDYSEKALAGQ 149
Query: 239 KVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V ++ V V+++ F++ R + + + + ++++ +
Sbjct: 150 AVVFEVTVNAVKEKQSAVLDDAFVQSVSDFKTVDEYRASVKEDLLKQKQQSADLQIQQYV 209
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED----LQYYHML 353
L + F + ++ + YN +++ + + + D + +
Sbjct: 210 LKNVVENSKFKLNKNTLSRRYNDRIKQYEEQAKMYGTNLSGMAKANGMDVPGLQEAVYAS 269
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
K V +V+ + E I + + + Q+ + +++F + L
Sbjct: 270 VKDDVKNQLVILKVAELEGITLEDADRQAF----AEMNGQTLEAAVEYFGQ-----ETLD 320
Query: 414 APIFEDKVIDHILKSV 429
KV+ + +
Sbjct: 321 EMALNQKVMKFMADNA 336
>gi|255279985|ref|ZP_05344540.1| putative trigger factor [Bryantella formatexigens DSM 14469]
gi|255269758|gb|EET62963.1| putative trigger factor [Bryantella formatexigens DSM 14469]
Length = 632
Score = 86.6 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 52/329 (15%), Positives = 126/329 (38%), Gaps = 10/329 (3%)
Query: 112 LKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD 171
Y L I + + L++ +D EV ++E+ + + E E GD
Sbjct: 251 FLEMPEYVALDYITLGEYTGLEIPKDPVEVSDEEVQAMIDTETVQ----TLTEGTVEEGD 306
Query: 172 KVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
V +DY +D + S + +GS + L+G+ G+ +++ FPE++
Sbjct: 307 TVNIDYVGELDGEEFDGGSAEGYSLEIGSGTFIDGFEDGLIGVAVGETTDLDLTFPENYH 366
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ 291
+DLAGK+V + ++ + +P + + A + + +++++ +
Sbjct: 367 SEDLAGKEVVFHVTVNSLQR-VPELTDEVAAEVADGMTAEEYKASVREELEESAAVQQDN 425
Query: 292 KVKRQILDYISNKYTFD-VPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
++ +L + + T + P +E + + + + +
Sbjct: 426 LARQDLLTAVIDNATVNGYPTEYLEYNMEMTRRNYTSMAEMYGMTYEELIEAYGMTEETF 485
Query: 351 HMLAKRRVLTGI----VLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYP 406
+ ++ T + VL I E +IE+++EE L + + + +
Sbjct: 486 TAEMEEQLKTVLPQEMVLLAIAETEDIELSDEEYTDGLAELIASLEEQGVTVTAEELEEE 545
Query: 407 NALAELRAPIFEDKVIDHILKSVQIVDRK 435
+ L + DKV++ ++++ V+
Sbjct: 546 YGVNYLSKSLLLDKVMEFLVENNTFVEES 574
>gi|217032888|ref|ZP_03438365.1| hypothetical protein HPB128_152g5 [Helicobacter pylori B128]
gi|216945382|gb|EEC24050.1| hypothetical protein HPB128_152g5 [Helicobacter pylori B128]
Length = 326
Score = 85.8 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/295 (17%), Positives = 143/295 (48%), Gaps = 7/295 (2%)
Query: 161 EVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQK 220
+ +++ DK+T+D+ ++N E +N I+GS + + + L+ ++ G++K
Sbjct: 31 TDAQRKAQNDDKLTIDFEGFINNAPFEGGKAENFSLILGSKQMLEDFEKALLDMQAGEEK 90
Query: 221 EIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQK 280
E FP + + LAGK+ + ++ + + +N++LA + E+A L ++
Sbjct: 91 EFPLTFPSKYHAEHLAGKEALFKVKLHQIQAREVLEINDELAKIVLANEENATLKLLKER 150
Query: 281 IKQH-----SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-Q 334
++ L +++K ++++ + K FD+P++++E E + + + + M + +
Sbjct: 151 VEGQLFLENKARLYNEELKEKLIENLDEKIVFDLPKTIIEQEMDLLFRNALYSMQAEEVK 210
Query: 335 KSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGH 394
Q +E + + A + V ++ + ++ I V + E+ LY + +
Sbjct: 211 SLQESQEKAKEKRESFRNDATKSVKITFIIDALAKEEKIGVHDNEVFQTLYYEAMMTGQN 270
Query: 395 EKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
+ +++ ++K N LA ++ + ED+V+ ++L +++ +++ N+ ++
Sbjct: 271 PESLIEQYRKN-NMLAAVKMAMIEDRVLAYLLDKNLPKEQQEILEKMRPNAQKTQ 324
>gi|153824130|ref|ZP_01976797.1| trigger factor [Vibrio cholerae B33]
gi|126518349|gb|EAZ75572.1| trigger factor [Vibrio cholerae B33]
Length = 169
Score = 85.8 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 273 MRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA 332
++ + +++ + ++ ++K Q ++ + + VP +L++ E N + Q+
Sbjct: 2 LKAEVRKNMERELKQAIKARIKEQAIEGLVKENEIQVPSALIDQEINVLRQQAAQRFGG- 60
Query: 333 NQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP 392
NV++ + + + AKRRV+ G++LG + + ++ EE++++ + + +
Sbjct: 61 -----NVEAAAQLPRELFEEQAKRRVVVGLLLGEVIRTHELKADEEKVKALITEMATAY- 114
Query: 393 GHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
+++ ++++ + +R E++ +D I+ ++ ++ ++F +L + +
Sbjct: 115 EDPSEVVSYYEQNQQLMNNMRNVALEEQAVDAIIAKAKVTEKAISFSELMNPVAA 169
>gi|298711832|emb|CBJ32857.1| Trigger factor (TF) [Ectocarpus siliculosus]
Length = 426
Score = 85.4 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/363 (15%), Positives = 128/363 (35%), Gaps = 25/363 (6%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKA--NIKGF-RPG-----KVPLSH 53
+V K + L++ +P +++ I + +A +I GF G K P
Sbjct: 61 EVTHKPAANSSIILNLDVPGETTQLCYDKAIRALSKEAGNSIPGFGNKGNKGNTKHPPEV 120
Query: 54 IKSLYG-KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL 112
I+ +G + + +++ I + +V E ++ D +A + + + + L V +
Sbjct: 121 IERHFGMEEVKGQSLKVISELVVNEAINSLDLQAIGSAELV---QDISVVTQLFTPGVPM 177
Query: 113 KLRLSYDILPQIEI-SSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD 171
L + D+ P++ I + ++ + +DE + + + NV E E
Sbjct: 178 MLEVKMDVWPEVNIVKEYTGFELEVEEPPIDEPRVAAAWKGLQERNVVLEDTEEGYAAQL 237
Query: 172 KVTVDYTVSVDNVILEDQSKKN---------VQFIVGSADLFSETTEILVGLKTGDQKEI 222
+V + + + V ++ S E + G+K G+ +EI
Sbjct: 238 GDSVIANMMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGETREI 297
Query: 223 ERFFPEDHSIK--DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQ 279
FP+ + DL G K EV VN + A + + +
Sbjct: 298 RITFPDKLGPQGGDLEGTKAVFEVEAVEVMKRNVPEVNEEFAQSIREGLTLEELTTEVEK 357
Query: 280 KIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV 339
+ + + R + + + + +PE+L+ + + E + +
Sbjct: 358 AVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQGESDAKI 417
Query: 340 DSI 342
S+
Sbjct: 418 QSM 420
>gi|225028900|ref|ZP_03718092.1| hypothetical protein EUBHAL_03189 [Eubacterium hallii DSM 3353]
gi|224953784|gb|EEG34993.1| hypothetical protein EUBHAL_03189 [Eubacterium hallii DSM 3353]
Length = 357
Score = 84.3 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/353 (14%), Positives = 122/353 (34%), Gaps = 25/353 (7%)
Query: 85 RAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEK 144
+ A + + E D GL E ++ + + + + L++ + +V +
Sbjct: 25 KKAAEATTEVKEETVDYGQGLNEDGTLEGVKATDYV----TVCDYSALKIPKKEVKVSDS 80
Query: 145 EIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLF 204
++ ++ I + ++ + V +DY VD + + +GS
Sbjct: 81 DVQTEIDTILSSYNQVTDRKVKKGDT--VNIDYKGMVDGKEFDGGTASGASLKIGSGTFI 138
Query: 205 SETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR 264
+ L+G G+ +++ FP+D+ K++AGK +I + D V+
Sbjct: 139 DGFEDQLIGKMPGETVQVKVTFPKDYQGKEVAGKDAVFETTINYI---DETPKLTDKFVK 195
Query: 265 LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQK 324
+ K E K I ++P+ L+ + + ++
Sbjct: 196 EKLSDRYGYTTVKEMKKTIRDEIFKTNKTDYIWNHMIEKSKFKEIPDELINDRVDVLVNG 255
Query: 325 VRFEMSSANQKSQNV-----DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEE 379
++ ++ ++N ++ + Y + V ++ I I VT+E+
Sbjct: 256 LKAQLKASNYTLKDYLSAYGIEDETTLRDQYKSSCESTVKVFLIADAIAADKKISVTDED 315
Query: 380 MQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
+++ + + K A + + + VI I K+V +
Sbjct: 316 VKAYF------NGEDTAQYEKQYSK-----AYINRIVLNNLVIQEIEKNVTVK 357
>gi|251772218|gb|EES52788.1| trigger factor, N-terminal domain [Leptospirillum
ferrodiazotrophum]
Length = 462
Score = 84.3 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 59/429 (13%), Positives = 134/429 (31%), Gaps = 35/429 (8%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSL--Y 58
M + + +G KR+ + + I+D + G+RPG+VP S+++S Y
Sbjct: 1 MSLKIEPGDGAKRKFQRGYSPEEVRTRVDRTIQDFLRDVKVPGYRPGRVPASYVRSRPPY 60
Query: 59 GKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSY 118
S+ E I E++ +++ + D L + +
Sbjct: 61 MASVHEEVTKGIHSEVIGDLIK-------GSAETVVFLDPEDFVVTEENEKSGLTVTGTI 113
Query: 119 DILPQIEISSFDDLQVTQ---DICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV 175
++ E ++ + ++ +E E + + ++ D V
Sbjct: 114 EVFSLPEGFVYEKIGLSPESLPTVSKEEVESAITLLAKQGATQFIQDLPEDTPAEDGDLV 173
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFF--PEDHSIK 233
+T S + VG + T L+G K GD + F P + +
Sbjct: 174 GFTFSFVDPATGLARDGRQTVTVGDPRVPEVLTRSLIGKKAGDSFTGKIPFNIPGEKKGE 233
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESE---SAMRGLCSQKIKQHSEFLVR 290
+ I V P+ + LG + + + QK+ + +
Sbjct: 234 RSRNETHEATIGILSVRRLKPLTREELFSSLLGGKEPVEGQTLESVVEQKVLEQKLTEIL 293
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
+ +++ + ++ VPE ++ E + Q + +
Sbjct: 294 NRKMEELVVEVLSRNALPVPEGRIDLEIARMKQAGMSD------------------AEID 335
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
K+ + +L + K + + ++ Y + R K + A+
Sbjct: 336 RERVKKDTMWWFILDELAAKIPVAPGVQRVEQEFYALIQRAGSPGKNEERRNEYIEQAVV 395
Query: 411 ELRAPIFED 419
R + E+
Sbjct: 396 SARRRLTEE 404
>gi|300870900|ref|YP_003785771.1| trigger factorg protein [Brachyspira pilosicoli 95/1000]
gi|300688599|gb|ADK31270.1| trigger factor, C-terminal domain protein [Brachyspira pilosicoli
95/1000]
Length = 436
Score = 83.9 bits (205), Expect = 6e-14, Method: Composition-based stats.
Identities = 72/431 (16%), Positives = 168/431 (38%), Gaps = 37/431 (8%)
Query: 13 RELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIK 72
L V++ + ++IE + K NIKGFR G P + I S Y + + S T + +I+
Sbjct: 18 VTLKVVVSKDAYNKELEKQIEYYKPKVNIKGFRIGHAPNNIILSRYREGLESATNEVMIE 77
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDL 132
+ +++ + P ++ E + D L L Y LP+I + +
Sbjct: 78 NVWNTYSDEKNAKCIATPKLSYMENKDD----------GLHLTYEYYPLPEIALPELSSI 127
Query: 133 QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKK 192
+ ++ +D++ I++ + FE E +SE+GDKV V + + K
Sbjct: 128 SLEKNKYNIDDEAIEKAYKLSLQRFSPFEESELKSELGDKVYVKIEFDDEENKKYN---K 184
Query: 193 NVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSP 252
+ I + + + V +K GD+K + F + I EV
Sbjct: 185 ELTLIATDNENETIFAKNAVDVKKGDKKLLTTFVNGREA------------TLIMEVLKV 232
Query: 253 LPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPES 312
+ +D + + ++ +++ + ++ + + I + + D+P+
Sbjct: 233 EKPNIKDDSKEEEVKKVKEGLKEHLAKRAEARADS---ELINDSIFNKMLELVKVDIPKG 289
Query: 313 LVENEYNGILQKVRFEMSSANQKSQNV----DSIDEEDLQYYHMLAKRRVLTGIVLGTIG 368
E E N L+ ++S + +++ + Y K+++ +++ +
Sbjct: 290 YYEMELNRALEDFERQVSGNGMTKTDFLISVGKKEDDIKKEYEENVKKQISFDLIMAKLA 349
Query: 369 EKNN--IEVTEEEMQSALYQ--QLGRFPGHEKKMLDHFQKYPNA-LAELRAPIFEDKVID 423
+ + + E++ + + Q + G K+ + Q N + E + ++D
Sbjct: 350 DVYKDSLNINEDKAKEYANRLYQYQSYLGLSKRPKEEQQDIINHIMKEAENRAVSEAILD 409
Query: 424 HILKSVQIVDR 434
+I + + I ++
Sbjct: 410 YIKEHINITEK 420
>gi|291550538|emb|CBL26800.1| trigger factor [Ruminococcus torques L2-14]
Length = 356
Score = 83.1 bits (203), Expect = 9e-14, Method: Composition-based stats.
Identities = 46/328 (14%), Positives = 126/328 (38%), Gaps = 21/328 (6%)
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTVDYTVSV 181
+ ++ + L+VT+ + + Q + A E + ++ GD V +DYT ++
Sbjct: 31 VTVNKYKGLEVTEVAKKEVSDDSVEQEVQSRLEAAATEQDVTDRAAQSGDWVNIDYTGTL 90
Query: 182 DNVILEDQSKKNVQFIVGSADLFS------ETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
D V + + +GS + +VG TG++ +I FPE++ DL
Sbjct: 91 DGVAFDGGTATGYDLELGSGSFIGASGDYQGFEDQIVGHNTGEEFDITVQFPENYQSSDL 150
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRL--GFESESAMRGLCSQKIKQHSEFLVRQKV 293
AGK + + +++ + + ++ ++ + +++ + ++
Sbjct: 151 AGKPANFHIVLNKIYQKVTPELTDEWVANNSESSKTVDEYKEEVKNSLQEQQDDSGNSQL 210
Query: 294 KRQILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQKSQN-----VDSIDEEDL 347
K+++ + ++ P+ V+ + + + + +++
Sbjct: 211 KQEVQTALLDQIEVNKYPDGAVDEQVKQANDYYTQIAQMYGVELSDFITTYLKMTEDQFN 270
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ AK+ V + I +K +E +++E + + + + + +
Sbjct: 271 EKIEDSAKQAVQLEEAVKLIAKKEKLEPSDKEYKEGMQEYADKAGADLDTYKEQVGED-- 328
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRK 435
L+ I DKV+D+++ + V++
Sbjct: 329 ---VLKDAILRDKVLDYLVDNCVQVEQS 353
>gi|295108806|emb|CBL22759.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Ruminococcus obeum A2-162]
Length = 432
Score = 83.1 bits (203), Expect = 9e-14, Method: Composition-based stats.
Identities = 51/380 (13%), Positives = 150/380 (39%), Gaps = 13/380 (3%)
Query: 93 TINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAE 152
E +D + + + +L D+ + I + L++ + V + ++ ++
Sbjct: 42 DSKEDSTDTDTKETDSSEGNRLVSVKDVSKYVTIGEYKGLELNRTSQSVTDDDVQAEINY 101
Query: 153 IAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILV 212
++N EVK+ E GD VT+++T ++D + S ++ + +VG ++ + +V
Sbjct: 102 DLEDNGT-EVKDGTVENGDTVTINFTGTIDGKEFDGGSAEDYELVVGDGEMIDGFEDGIV 160
Query: 213 GLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESA 272
G+K+G+ KE++ FP+D+ + +AGK V ++++ P + +A +++
Sbjct: 161 GMKSGETKELDLTFPDDYYEESVAGKAVVFKVTLQKFTRPAELTD-EWVAANTDYKTVDE 219
Query: 273 MRGLCSQKIKQHSEFLVRQKVKRQILDYI-----SNKYTFDVPESLVENEYNGILQKVRF 327
R ++++ + + + + Y + ++ ++ + V+
Sbjct: 220 YREAVKKQLEDTAAQTADYGLYSNAWNEVQAASEVKDYPKEDVDAAKKSYQELNEEYVKE 279
Query: 328 EMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQ 387
+ ++ +E+ A+ +V +++ I + + + +EE Q
Sbjct: 280 AGMEMSDFLESQGMTEEDYESECQQYAESKVEQNLIVQGIMDAEGLSINDEETQKLKDDL 339
Query: 388 LGRFP-GHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ + +M++ + + E+ + +V I+++ + + + D
Sbjct: 340 IEEYGFASIDEMIETYGE-----QEVNESLALLRVERFIVENATVTEVAGDSEDAVDEGD 394
Query: 447 ESSPEKLLDKSSKVETFQSE 466
+ + +
Sbjct: 395 DLEEYDESKDIDTGDDTEDN 414
>gi|167949877|ref|ZP_02536951.1| trigger factor [Endoriftia persephone 'Hot96_1+Hot96_2']
gi|110589384|gb|ABG77201.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor a
molecular chaperone involved in cell division)
[Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 182
Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 278 SQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ 337
+ ++ R+ K Q +D + VP +LV+ E + + + R + +
Sbjct: 23 REYGERAETSESRRVSKGQAMDLLIECNELHVPTALVDEEIDALRNQTRSRLPAG----- 77
Query: 338 NVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK 397
S E + AKRRV G+++ + +KN+I++ +E ++ + + + ++
Sbjct: 78 --SSSMELPRDMFESQAKRRVGLGLLIAEVIKKNSIKLDDERVRQTIEEFAASY-EQPEE 134
Query: 398 MLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
++ H+ LA ++ + ED+V+D +++ +VD F +L S
Sbjct: 135 VIKHYYANQEQLAAVQNVVLEDQVVDWVMEQADVVDEPTNFAELTAES 182
>gi|166032124|ref|ZP_02234953.1| hypothetical protein DORFOR_01827 [Dorea formicigenerans ATCC
27755]
gi|166027847|gb|EDR46604.1| hypothetical protein DORFOR_01827 [Dorea formicigenerans ATCC
27755]
Length = 354
Score = 82.4 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/306 (11%), Positives = 108/306 (35%), Gaps = 15/306 (4%)
Query: 135 TQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNV 194
+ D+ +++ + EV + ++ GD V + + ++D + S +
Sbjct: 47 DKPEKVTDDDVEQYIQSQLTSSATTTEVTDRAAQKGDTVDIAFVGTIDGEAFDGGSSDSY 106
Query: 195 QFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLP 254
+GS + + ++G G+ + FP+D+ DLAGK + ++ +
Sbjct: 107 SLELGSGTMIDGFEDSIIGHNVGETFVWDGKFPDDYQSTDLAGKACQFTITVNSISEQNV 166
Query: 255 VVVNNDLA------VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFD 308
+ ++ + E + ++ + ++ + ++ + + ++D + +
Sbjct: 167 PELTDEWVANNSKSSKTVKEYKKEIKKTLEDQKQEDYDSTLKSEAWQAVVDNTTVQKYSK 226
Query: 309 VPESLVENEYNGILQKVRFEMSSANQKSQNV-----DSIDEEDLQYYHMLAKRRVLTGIV 363
+ ++ N ++ + S + E Q A+ ++
Sbjct: 227 KQQEKIDEMKNSLIDSYKSYAESQGTDYETYITSSGQYTVESFEQKVEEAAQESEKQTMI 286
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
I +K I++ ++ + L + + + ++ L+ + D V D
Sbjct: 287 AEAIADKEKIKLDDKTYKKMLKEYAKTYGFEDGDAMEKAYS----KDTLKEAMLTDLVKD 342
Query: 424 HILKSV 429
++ +
Sbjct: 343 WLVDNC 348
>gi|229825411|ref|ZP_04451480.1| hypothetical protein GCWU000182_00767 [Abiotrophia defectiva ATCC
49176]
gi|229790415|gb|EEP26529.1| hypothetical protein GCWU000182_00767 [Abiotrophia defectiva ATCC
49176]
Length = 378
Score = 82.4 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/313 (17%), Positives = 128/313 (40%), Gaps = 9/313 (2%)
Query: 125 EISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNV 184
+++ + L+ ++ E + EI+ ++ N ++ + + GD V +D+ D V
Sbjct: 64 KLAEYKGLEYSKVDTEATDAEIEDRVKSFLSNYPE-KITDRAVKKGDTVNIDFEGKKDGV 122
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
+ + K +GS + L+G K G+ ++ FP+D+ ++L G KV
Sbjct: 123 AFDGGTAKGFDLTIGSNSFIPGFEDGLIGKKPGETVDLNLKFPDDYKSEELKGAKVVFTV 182
Query: 245 SIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS- 302
I + P + ++L F++ + + K+++ + + R++L+ +
Sbjct: 183 KINYIAGEAPKELTDELVKANTDFKTAAEYKADIKAKLEESKKNEAKANTTRELLEKVVT 242
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI-----DEEDLQYYHMLAKRR 357
VP++ E Y I+ + + +++ + +EE A+
Sbjct: 243 ESAIKSVPKAAEEKYYAQIMGYWNNVATQYGMELKDLVTNQFKLTEEEFEAEVKKQAELS 302
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+V+ I E +E++++E ++AL + L ++K L I
Sbjct: 303 ARILVVVRAIAEAEKLEISDDEYKAALNTYYENSNAKDSMDLATYEKQVG-KESLMDIIL 361
Query: 418 EDKVIDHILKSVQ 430
DKV ++++ +
Sbjct: 362 NDKVGTFLMENGK 374
>gi|148887443|sp|Q4A5G1|TIG_MYCS5 RecName: Full=Trigger factor; Short=TF
gi|144575192|gb|AAZ44010.2| putative trigger factor [Mycoplasma synoviae 53]
Length = 462
Score = 82.4 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/364 (14%), Positives = 129/364 (35%), Gaps = 16/364 (4%)
Query: 12 KRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KSILSETIDEI 70
+ + + + ++ + + + K + G+R GK P +++ K +L + +
Sbjct: 12 ELVVSLFVSKEQVDKEYQKLETEALKKIKVNGYRAGKAPKEALRARLNSKDLLDRVLQNL 71
Query: 71 IKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFD 130
KE + E+ + ER I E + +P +
Sbjct: 72 SKENLNEVYKQLMERK------EPVTFAYTIDLKEKENG--FTFDYKFAKVPTVSDLDVK 123
Query: 131 DLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQS 190
+ + +V +K++ + + E E++ GD+V D+ +D E
Sbjct: 124 SAKTELKLEKVTDKDVLESIETRLNEGRSRVKVEDEAKKGDEVLFDFKGYIDGEAFEGGE 183
Query: 191 KKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVF 250
++ ++GSA + E L+G K G + EI+ FP + +K+ K+ ++KEV
Sbjct: 184 AEDYSLVLGSAQFIAGFEEQLLGKKAGWKGEIKATFPSTYYVKNYRDKEATFEINLKEVR 243
Query: 251 SPLPVVVNNDLAVRLGFESESAMRGL---CSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
+ +++ SE + + + ++ +++ +S F
Sbjct: 244 RVNSLKLDSKEFKDSPLGSEEYLGQYKVFVKKDLVVSRFIQSQRDFLDELVKELSQSVKF 303
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKRRVLTGIV 363
+ + L++ + + ++ ++ K + +E+ A +
Sbjct: 304 HISDLLLKEKIAQLDKQFNDQLKQYKVKRKEYLEVIKATEEDIQVELKTSAVNEYKLSYI 363
Query: 364 LGTI 367
+
Sbjct: 364 YQEL 367
>gi|302672136|ref|YP_003832096.1| peptidyl-prolyl cis-trans isomerase FKBP-type [Butyrivibrio
proteoclasticus B316]
gi|302396609|gb|ADL35514.1| peptidyl-prolyl cis-trans isomerase FKBP-type [Butyrivibrio
proteoclasticus B316]
Length = 435
Score = 82.0 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 100/263 (38%), Gaps = 17/263 (6%)
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ + + +GS LVG+ GD ++ FPE++ ++LAGK V +
Sbjct: 141 FDGGTAEGASLTIGSNSYIEGFESGLVGVNIGDTVDLNLTFPENYGAENLAGKDVVFTVT 200
Query: 246 IKEVFSPLPVVVNNDLAVRLG--FESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
+ + +P + + A + +R + ++ ++ V+ + + +
Sbjct: 201 VNSIQAPDTEMSDEWAAGLGYDGVTDLATLRDYARKTLEDQAQNEFDSTVENTAVQTVYD 260
Query: 304 KYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML--------- 353
F D+P++L+ Q + ++ + + + D Y +
Sbjct: 261 STAFGDIPQALINRYMKQQKQMLDYQATMYSYYYGQQLTADSLLANYMNAEGFVGTVDDY 320
Query: 354 ----AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+K ++ I ++ NI V++EE+ + L + +++ + L
Sbjct: 321 LNDISKDMAQQYLMFQAIADEENITVSDEEIDAYLKNAYENASTTSFSSFEEYKESLD-L 379
Query: 410 AELRAPIFEDKVIDHILKSVQIV 432
R + DKV+ I+++ +V
Sbjct: 380 EIYREGLMADKVVAFIVENANVV 402
>gi|222834502|gb|EEE72979.1| predicted protein [Populus trichocarpa]
Length = 121
Score = 81.6 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 333 NQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP 392
Q+ + + A+RRV G++L I + N +E +++++ + +
Sbjct: 7 EQRGMPNAKDMPIPAEMFTQQAERRVKLGLILAEIVKANGLEAKPDQIKAEIEDFAKSY- 65
Query: 393 GHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
K+++ + LAE+ A + E+ V++ + ++ D+ V+F++L +++
Sbjct: 66 EDPKEVMRWYYGDQQRLAEMEAYVLENNVVNFVCDKAKVADKTVSFEELTAAPAQA 121
>gi|238923387|ref|YP_002936903.1| trigger factor [Eubacterium rectale ATCC 33656]
gi|238875062|gb|ACR74769.1| trigger factor [Eubacterium rectale ATCC 33656]
Length = 419
Score = 81.2 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/341 (15%), Positives = 119/341 (34%), Gaps = 19/341 (5%)
Query: 111 DLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG 170
D+ L + + + + + + G
Sbjct: 61 DIDYAKQVTKLADYSGVAITVSNDYEINDTAKQTYLTNVLQSYGADAYKQVTDRDTVADG 120
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQF------IVGSADLFSETTEILVGLKTGDQKEIER 224
D V VDYT D + S +V VG + T+ L+G K GD+ + +
Sbjct: 121 DYVKVDYTGYKDGKAFDGGSATDVMLDVTNNSQVGGSSFIDGFTKPLIGAKVGDKVKGDV 180
Query: 225 FFPEDHSIKDLAGKKVRLNFSIKEVFSPLP---VVVNNDLAVRLGFESESAMRGLCSQKI 281
FPED+ DL G V +++K ++S P + ++ + ++ + +I
Sbjct: 181 TFPEDYGNDDLNGHTVTFEYTVKGIYSADPVALADMTDEQVNTVFGKAGVTTNAQLTTQI 240
Query: 282 KQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ---- 337
++ + + +I Y+ + T ++P+ ++ N + E Q +
Sbjct: 241 EKDLKQQLYSAEVDKIKSYMIDNSTVEIPDEYLQARLNEYIASFTKENVKDGQTLKKYLK 300
Query: 338 -NVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHE- 395
N + ++ + + ++ T + G I EK NI++ ++ S + + G
Sbjct: 301 SNYNMTVDQATEKWKENLTDQIKTEFIFGLIAEKENIKMDDDAFNSYVDYIVSASNGQFS 360
Query: 396 --KKMLDHFQK--YPNALAELRAPIFEDKVIDHILKSVQIV 432
++ +F L+ +K ID + + +
Sbjct: 361 KASEVYKYFGSGHKDEGKTYLKNQYLVNKAIDTVTEKANVT 401
>gi|195941430|ref|ZP_03086812.1| trigger factor [Borrelia burgdorferi 80a]
Length = 377
Score = 81.2 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 49/354 (13%), Positives = 140/354 (39%), Gaps = 11/354 (3%)
Query: 100 DITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVA 159
+ + D + +Y+ P+ +I SFD + + +I EV + D
Sbjct: 20 KEKNLKLNLDEDFEFTFTYETYPEFKIPSFDKIDIKVEIPEVFIDDSDIDDEIKNLQIEN 79
Query: 160 FEVKETESEIGDKVTVDY----TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLK 215
+ E E + + ++ + + + ++ F VG ++ + + + ++G++
Sbjct: 80 SIIIEDEEGVVKEDSIVKVDFVELDDLSNEIVSTKRQGFVFTVGKSETYYDFDKDVIGMR 139
Query: 216 TGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAM 273
+++ IE+ + D+ ++LAG +L IK + +++++ A + + +
Sbjct: 140 INEERVIEKSYIADYKFEELAGSSRKLKIKIKSIKKRDLPLIDDEFAQDISDKYNTLDDL 199
Query: 274 RGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN 333
+ + E + IS K D+P S++E E + + + +
Sbjct: 200 KNFIRSSLLNIVEEKKETLKLNKFFSTISEKLEIDIPHSMIEAEIEIAFKDAKRQNKNNM 259
Query: 334 QKSQNV---DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGR 390
+ S + + +++ + + + I+VTE +++ + +Q
Sbjct: 260 SLEEFKSIFYSSGYIGGDNLKDEILGNLKSKLIMQKMVDLDPIKVTESDVEDEMARQSKN 319
Query: 391 FPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ-IVDRKVTFDQLFD 443
+++ + + N ++ L+ I ++ IL++++ + +K+ F +
Sbjct: 320 LGVSYEEIKKFY-EDQNLISYLKDDIKRERAKKKILENLKEVKGKKLNFRDFVN 372
>gi|71894613|ref|YP_278721.1| putative trigger factor [Mycoplasma synoviae 53]
Length = 467
Score = 81.2 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/364 (14%), Positives = 129/364 (35%), Gaps = 16/364 (4%)
Query: 12 KRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-KSILSETIDEI 70
+ + + + ++ + + + K + G+R GK P +++ K +L + +
Sbjct: 17 ELVVSLFVSKEQVDKEYQKLETEALKKIKVNGYRAGKAPKEALRARLNSKDLLDRVLQNL 76
Query: 71 IKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFD 130
KE + E+ + ER I E + +P +
Sbjct: 77 SKENLNEVYKQLMERK------EPVTFAYTIDLKEKENG--FTFDYKFAKVPTVSDLDVK 128
Query: 131 DLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQS 190
+ + +V +K++ + + E E++ GD+V D+ +D E
Sbjct: 129 SAKTELKLEKVTDKDVLESIETRLNEGRSRVKVEDEAKKGDEVLFDFKGYIDGEAFEGGE 188
Query: 191 KKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVF 250
++ ++GSA + E L+G K G + EI+ FP + +K+ K+ ++KEV
Sbjct: 189 AEDYSLVLGSAQFIAGFEEQLLGKKAGWKGEIKATFPSTYYVKNYRDKEATFEINLKEVR 248
Query: 251 SPLPVVVNNDLAVRLGFESESAMRGL---CSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
+ +++ SE + + + ++ +++ +S F
Sbjct: 249 RVNSLKLDSKEFKDSPLGSEEYLGQYKVFVKKDLVVSRFIQSQRDFLDELVKELSQSVKF 308
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKRRVLTGIV 363
+ + L++ + + ++ ++ K + +E+ A +
Sbjct: 309 HISDLLLKEKIAQLDKQFNDQLKQYKVKRKEYLEVIKATEEDIQVELKTSAVNEYKLSYI 368
Query: 364 LGTI 367
+
Sbjct: 369 YQEL 372
>gi|313112834|ref|ZP_07798481.1| putative trigger factor [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624904|gb|EFQ08212.1| putative trigger factor [Faecalibacterium cf. prausnitzii KLE1255]
Length = 390
Score = 80.8 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/320 (11%), Positives = 99/320 (30%), Gaps = 31/320 (9%)
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKE-TESEIGDKVTVDYTVSVDNV 184
F + + ++ E E+ +Q+ + + + ++ GD +DYT +VD V
Sbjct: 87 PEDFGSIALKENDLTPTEDELQQQVDNLLNQYTSSQPVTGRAAQSGDVANIDYTGTVDGV 146
Query: 185 ILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA-------- 236
+ +GS + ++G GD ++ FP+ + A
Sbjct: 147 AFTGGTATGYDLTLGSGSFIDGFEDQIIGHNVGDTFDVTVTFPDGYGDSTDAEGNTITLS 206
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
GK+ + ++ + + + ++ F + + + + +
Sbjct: 207 GKEAVFSVTLNSISESVTPELTDEWVDS-NFGTSDDLHTVDQLRSYFNDALYATNYENAI 265
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA-- 354
+ +SN ++P + L ++ + A
Sbjct: 266 VDYLMSNSTFKELPGEITSYYIRMFLNYYNQYATAYGMDLNAFAQTQGYTDADAMLAASD 325
Query: 355 ---KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ ++L + E ++ T+EE+ A + L
Sbjct: 326 AYFEHLAKQDLILQAVAETKSLAPTQEELDDANSTYADTYGE-----------NRAHLNA 374
Query: 412 LRAPIFEDKVIDHILKSVQI 431
L++ V+D + ++ +
Sbjct: 375 LQSC-----VLDWLEENSTV 389
>gi|291525476|emb|CBK91063.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Eubacterium rectale DSM 17629]
Length = 419
Score = 80.8 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 54/341 (15%), Positives = 119/341 (34%), Gaps = 19/341 (5%)
Query: 111 DLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG 170
D+ L + + + + + + G
Sbjct: 61 DIDYAKQVTKLADYSGVAITVSNDYEINDTAKQTYLTNVLQSYGADAYKQVTDRDTVADG 120
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQF------IVGSADLFSETTEILVGLKTGDQKEIER 224
D V VDYT D + S +V VG + T+ L+G K GD+ + +
Sbjct: 121 DYVKVDYTGYKDGKAFDGGSATDVLLDVTNNSQVGGSSFIDGFTKPLIGAKVGDKVKGDV 180
Query: 225 FFPEDHSIKDLAGKKVRLNFSIKEVFSPLP---VVVNNDLAVRLGFESESAMRGLCSQKI 281
FPED+ DL G+ V +++K ++S P + ++ + ++ + +I
Sbjct: 181 TFPEDYGNDDLNGQTVTFEYTVKGIYSADPVALADMTDEQVNTVFGKAGVTTNAQLTTQI 240
Query: 282 KQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ---- 337
++ + + +I Y+ T ++P+ ++ N + E Q +
Sbjct: 241 EKDLKQQLYSAEVDKIKSYMIENSTVEIPDEYLQARLNEYIASFTKENVKDGQTLKKYLK 300
Query: 338 -NVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHE- 395
N + ++ + + ++ T + G I EK NI++ ++ S + + G
Sbjct: 301 SNYNMTVDQATEKWKENLTDQIKTEFIFGLIAEKENIKMDDDAFNSYVDYIVSASNGQFS 360
Query: 396 --KKMLDHFQK--YPNALAELRAPIFEDKVIDHILKSVQIV 432
++ +F L+ +K ID + + +
Sbjct: 361 KASEVYKYFGSGHKDEGKTYLKNQYLVNKAIDTVTEKANVT 401
>gi|270648229|ref|ZP_06222197.1| trigger factor [Haemophilus influenzae HK1212]
gi|270317218|gb|EFA28808.1| trigger factor [Haemophilus influenzae HK1212]
Length = 122
Score = 80.4 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 328 EMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQ 387
+A + N + + + A RRV G++ + + N ++ EE ++ +
Sbjct: 5 RNQAAQRFGGNAQQTAQLPRELFEAEATRRVQVGLLFSEVIKSNELKADEERAKAMIADI 64
Query: 388 LGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNS 445
+ ++++++ K + +R + E++ +D +L Q+ ++ +FD++ +
Sbjct: 65 ASAY-EQPAEVVEYYSKNEELMNNIRNVVLEEQAVDAVLAKAQVTEKVSSFDEIMNPQ 121
>gi|282600899|ref|ZP_05980063.2| trigger factor [Subdoligranulum variabile DSM 15176]
gi|282570775|gb|EFB76310.1| trigger factor [Subdoligranulum variabile DSM 15176]
Length = 427
Score = 80.4 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/317 (12%), Positives = 109/317 (34%), Gaps = 20/317 (6%)
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK--ETESEIGDKVTVDYTVSVDN 183
+ D+ + + EV +++I + ++ A + + + GD V +DY ++D
Sbjct: 117 PDDYADITIDASLAEVTDQDITDYIDSNILSSFATTNQVTDRAAATGDTVNIDYVGTIDG 176
Query: 184 VILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
V + S + +GS + +VG G+ ++ FP+++ DLAGK +
Sbjct: 177 VEFDGGSAQGYDLELGSGTFIDGFEDQIVGHTPGETFDVNVTFPDNYGSTDLAGKAAVFS 236
Query: 244 FSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISN 303
++ + + + + + + Q +
Sbjct: 237 TTLNYISETVTPELTDAWVQENLSPTMGVSDVTTLNDFVKKQLAFNNQYSDVYTALHDKV 296
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV---------DSIDEEDLQYYHMLA 354
+ ++PES E N +L + + S +E +
Sbjct: 297 SFADELPESAKEYFRNVLLYGIYSYAQKYGTDMTTIVTSGFLGSGYSTVDEFIADMDGSI 356
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP-GHEKKMLDHFQKYPNALAELR 413
++ ++L I EK I+ + + + ++ + + + ++
Sbjct: 357 NTQLEQTLLLQAIAEKEGIQCDTDTLNTEFVN---QYGIKDPSNFTEIYGEN-----YVK 408
Query: 414 APIFEDKVIDHILKSVQ 430
+ + V+ +++ +V+
Sbjct: 409 CQLLDSIVMQNLINNVK 425
>gi|291528415|emb|CBK94001.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Eubacterium rectale M104/1]
Length = 419
Score = 80.1 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 54/341 (15%), Positives = 120/341 (35%), Gaps = 19/341 (5%)
Query: 111 DLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG 170
D+ L + + +K + + + G
Sbjct: 61 DIDYAKQVTKLADYSGIAITVSNDYEINDTAKQKYLTNVLQSYGADAYKQVTDRDTVADG 120
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQF------IVGSADLFSETTEILVGLKTGDQKEIER 224
D V VDYT D + S +V VG + T+ ++G K GD+ + +
Sbjct: 121 DYVKVDYTGYKDGKAFDGGSATDVMLDVTNNSQVGGSSFIDGFTKPIIGAKVGDKVKGDV 180
Query: 225 FFPEDHSIKDLAGKKVRLNFSIKEVFSPLP---VVVNNDLAVRLGFESESAMRGLCSQKI 281
FPED+ DL G+ V +++K ++S P + ++ + ++ + +I
Sbjct: 181 TFPEDYGNDDLNGQTVTFEYTVKGIYSADPVALADMTDEQVNTVFGKAGVTTNAQLTTQI 240
Query: 282 KQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ---- 337
++ + + +I Y+ T ++P+ ++ N + E Q +
Sbjct: 241 EKDLKQQLYSAEVDKIKSYMIENSTVEIPDEYLQARLNEYIASFTKENVKDGQTLKKYLK 300
Query: 338 -NVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHE- 395
N + ++ + + ++ T + G I EK NI++ ++ S + + G
Sbjct: 301 SNYNMTVDQATEKWKENLTEQIKTEFIFGLIAEKENIKMDDDAFNSYVDYIVSASNGQFS 360
Query: 396 --KKMLDHFQK--YPNALAELRAPIFEDKVIDHILKSVQIV 432
++ +F L+ +K ID + + +
Sbjct: 361 KASEVYKYFGSGHKDEGKTYLKNQYLVNKAIDTVTEKANVT 401
>gi|238916134|ref|YP_002929651.1| peptidylprolyl isomerase [Eubacterium eligens ATCC 27750]
gi|238871494|gb|ACR71204.1| peptidylprolyl isomerase [Eubacterium eligens ATCC 27750]
Length = 405
Score = 80.1 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 54/287 (18%), Positives = 109/287 (37%), Gaps = 22/287 (7%)
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
+ +DY+ +D + + + +GS + + LVGL G + +I FPE +
Sbjct: 121 IKLDYSGKLDGTAFSGGTATDASYTIGSGKFIDDLDKGLVGLTVGVETDIPCTFPESYQN 180
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDL------------AVRLGFESESAMRGLCSQK 280
DLAGK+V ++KE+ + +N++ A E A +
Sbjct: 181 SDLAGKQVVFTVTVKEIDVTVVPELNDEWVTANASKLGVSDAELTNVEDLRAYVKNYLET 240
Query: 281 IKQHSEFLVRQKVKRQILDYISNKYTFDVPE-----SLVENEYNGILQKVRFEMSSANQK 335
+ + + + + E + N + Q SS
Sbjct: 241 QAASNRSSTVFETAYSQMSDGLDVSEYPSEELADLLKTLNNNVDSEYQSYSSSYSSKEDY 300
Query: 336 SQNVDSID--EEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP- 392
++ + D + +Y AK+ +L +++ I NNI V+ +++ S + +
Sbjct: 301 LKSAYNFDSLDAFNEYADNYAKQYLLQKMIITMIAADNNITVSADDINSTGEELASYYGY 360
Query: 393 GHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFD 439
+++LD + K N AE+ + KV++ + +V I D T
Sbjct: 361 NDYQEILDTYGKTMN--AEIGYQVLYQKVVEFVCDNVTINDTSSTEQ 405
>gi|255280214|ref|ZP_05344769.1| trigger factor [Bryantella formatexigens DSM 14469]
gi|255269305|gb|EET62510.1| trigger factor [Bryantella formatexigens DSM 14469]
Length = 432
Score = 80.1 bits (195), Expect = 8e-13, Method: Composition-based stats.
Identities = 57/346 (16%), Positives = 132/346 (38%), Gaps = 11/346 (3%)
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTVSVDNVILE 187
+ L V +++ E+ ++E+ + + E+ + + GD V +D+ S+D LE
Sbjct: 41 YTGLTVDREVTEITDEELQYAIESDLAMYAEYNEISDRAARDGDVVVIDFAGSIDGEELE 100
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
D S ++++ +GS + +VG+KTG+ K + FPE + G+ ++
Sbjct: 101 DGSMEDMEIELGSDSFIDGFEDAIVGMKTGETKTFDLTFPEPYDGVLD-GQTATFEVTLN 159
Query: 248 EVFSPLPVVVNNDL-AVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYT 306
E++ + N++ A + +++ IL + + T
Sbjct: 160 EIYEVITPEYNDEYVASISDCSTVEEYEEELRATLEEEYAADALDMACEDILTTVIDSST 219
Query: 307 FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGT 366
F + ++ E ++ + + + +V+ T
Sbjct: 220 FSGRPEELYESCRSAVEI--EEQTALEDYGIDDIHEIYGEDYDQDSYILETMYERMVVYT 277
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHIL 426
I K +I VT+EE Q+AL + + E ++ +++ + + + KV+D +
Sbjct: 278 IAAKEDIAVTDEEYQAALEEDMMYT---EYASVEEYEESIADVTSYQYYLLRQKVLDFLG 334
Query: 427 KSVQIVDRKVTF---DQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
++ D + D+ +++ E E + +E E
Sbjct: 335 ENNHFNDVDASLYYEDEDWESLDEEDLEFADEDVQYMEGADDEAVE 380
>gi|291457923|ref|ZP_06597313.1| trigger factor [Oribacterium sp. oral taxon 078 str. F0262]
gi|291419467|gb|EFE93186.1| trigger factor [Oribacterium sp. oral taxon 078 str. F0262]
Length = 414
Score = 79.7 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/371 (13%), Positives = 132/371 (35%), Gaps = 18/371 (4%)
Query: 96 EGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAK 155
+ D + + + +I++ ++VT E + +
Sbjct: 53 QVSEDDPELKKLEETKVPKAPAVSKMGKIKLPDLSTIEVTVSPREDIKDDEVEDQIRYIL 112
Query: 156 NNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLK 215
+ +E GD V +DY +D + S + + +GS + L+G K
Sbjct: 113 E-GNKTKVDAPAEKGDSVNIDYEGKIDGQTFDGGSAQGYELELGSNSFIPGFEDQLIGHK 171
Query: 216 TGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAV---RLGFESESA 272
+G+ ++ FP+D+ KD+AGK + I V + ++ ++ A
Sbjct: 172 SGEDVTVKVTFPQDYRNKDVAGKDAEFSVKINSVEKT--PELTDEWVKNYQETTADTVDA 229
Query: 273 MRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA 332
R +++ S++ +++++ L I +K + +S+ + ++ ++
Sbjct: 230 FRTQMKERMVAGSDYNYHMEIQQKALADIVDKSEITLSDSMKKYATAYAIRSQLDQIEKY 289
Query: 333 NQKSQNVDSI----DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQL 388
K ++ ++ ++ + V+ I I++ ++ +
Sbjct: 290 GMKISDMLNMYGTSVQDFRTQMETQGEEYGKQYFVIQKIAADQGIKLNDDLINKVAENAT 349
Query: 389 GRFPGHE--KKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
K+++ F K + + V+D+I V+ ++ T ++ ++S+
Sbjct: 350 KITGKEYNKDKLIEEFGK-----ETIESEAVTMAVLDYIESKVKTTVQEET-SEVPESST 403
Query: 447 ESSPEKLLDKS 457
+ E
Sbjct: 404 AAPAESSTAAK 414
>gi|225571420|ref|ZP_03780416.1| hypothetical protein CLOHYLEM_07518 [Clostridium hylemonae DSM
15053]
gi|225159896|gb|EEG72515.1| hypothetical protein CLOHYLEM_07518 [Clostridium hylemonae DSM
15053]
Length = 358
Score = 79.3 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/311 (14%), Positives = 116/311 (37%), Gaps = 12/311 (3%)
Query: 133 QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKK 192
+V + D+ + + E+ + E GD V +DY + + S +
Sbjct: 45 EVEKASKVTDKDVESAIQSTLESKATQKEITDRAVENGDTVNIDYVGKIGGETFDGGSAE 104
Query: 193 NVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSP 252
+ +GS E ++G G+ + FPE++ D AGK V ++ ++
Sbjct: 105 DYPLTIGSGVFIEGFEESVIGHNIGETYDWNGKFPENYGNADYAGKDVVFTITVNKITQD 164
Query: 253 LPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVP 310
+++ ++ + +++++ +E + + + + +K
Sbjct: 165 EVPELDDKFVKSVSEKSKTVKEYKKEVKKQLEEEAETAYNDNLSSAVWEAVLDKSKVKKY 224
Query: 311 ESL-VENEYNGILQKVR-----FEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVL 364
V++ + ++Q+ + ++M + + + EE + + AK V +V
Sbjct: 225 PKKDVKDITDNLIQQYKDAAEYYQMDYDTFIQEQMGATVEEFEEQVNKAAKSSVKQTLVT 284
Query: 365 GTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDH 424
I +K I+++++E + L + + L + +L+ + V D
Sbjct: 285 KAIADKEKIKLSDDEYKKQLKKMAETYGYENADALKKAAEE----DDLKEMALNNLVKDW 340
Query: 425 ILKSVQIVDRK 435
+ K+ V +
Sbjct: 341 LAKNCVQVAKT 351
>gi|327537480|gb|EGF24203.1| trigger factor [Rhodopirellula baltica WH47]
Length = 276
Score = 79.3 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/223 (17%), Positives = 88/223 (39%), Gaps = 2/223 (0%)
Query: 211 LVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFES 269
+ K GD + E H+ +++ GK+V F++ EV + ++ FE+
Sbjct: 1 MKDCKEGDVVTGKVKLGEGHANEEMQGKEVDATFTVVEVLKEQLPELTSEFLDELGEFET 60
Query: 270 ESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEM 329
E +R +++ + F Q ++ I++ + F++P +LV + L + E
Sbjct: 61 EDELREFVRASLERQANFRTEQAMRGSIIEKLLASADFELPPTLVRRQMKRELDRKVLEF 120
Query: 330 SSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLG 389
+ + Q + + +L I ++ I+ +E ++ +
Sbjct: 121 RRSGFDDDMIRRFVNASKQNMQQGTESSLREHFILEQIADEEKIDAEPQEYETEIQLIAE 180
Query: 390 RFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
+ +++ +K + LR I E KVI+ I ++ +
Sbjct: 181 QSDSSPRRVRARLEKT-GQMDALRNQIVERKVIELISEAATVT 222
>gi|331084201|ref|ZP_08333307.1| trigger factor tig [Lachnospiraceae bacterium 6_1_63FAA]
gi|330402056|gb|EGG81629.1| trigger factor tig [Lachnospiraceae bacterium 6_1_63FAA]
Length = 391
Score = 78.9 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/311 (14%), Positives = 115/311 (36%), Gaps = 10/311 (3%)
Query: 135 TQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNV 194
+ +E E + + ++ + D V +D+T +D + S +
Sbjct: 79 PKAAVTDEEVENSIHYTLMTGYDQVEVTEDRAVQQDDTVNIDFTGYMDGEEFDGGSAQGE 138
Query: 195 QFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLP 254
+GS + + L+G K G++ ++ FP D+S++++ GK + I + +P
Sbjct: 139 DLRIGSGSMIEGFEDGLIGHKKGEEVTLDLTFPTDYSVEEMQGKAAQFKIKINSIS-QVP 197
Query: 255 VVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLV 314
+ + A +++ R +++ + +VK + + F +
Sbjct: 198 ELTDEWAAANTDYKTAEEFRTAQKDMMQKSIDLEYEGQVKSDLFAMVVEATEFKEYPEAL 257
Query: 315 ENEYNGILQKVRFEMSSANQ------KSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIG 368
+ ++ +M A + + DEE + A+ + +++ I
Sbjct: 258 LEQGKKDVRNRMDQMYQAQFQITLDEYIKQQEISDEEVEKVLTESAQTYLQQNLIVQAIF 317
Query: 369 EKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS 428
IE++EE+ + + + + + + L L+ + +K D I+ +
Sbjct: 318 NAEGIELSEEDYTAEEAKFAELNGFPDAETMKMYYGD---LNVLKDSVLWNKACDVIMGT 374
Query: 429 VQIVDRKVTFD 439
+ +++ D
Sbjct: 375 ATVTEQEPEAD 385
>gi|33863282|ref|NP_894842.1| putative trigger factor [Prochlorococcus marinus str. MIT 9313]
gi|33640731|emb|CAE21186.1| putative trigger factor [Prochlorococcus marinus str. MIT 9313]
Length = 132
Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 42/128 (32%), Gaps = 4/128 (3%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG-K 60
+V +++ +P+ R S++ + + S + GFRPGK+P I G
Sbjct: 7 KVKINALPDNHISIELEVPAARCKSSYDAALSRLGSAIRLPGFRPGKIPKQVIIQQIGIA 66
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I + ++++I E + + + + L ++
Sbjct: 67 RIKAAALEKLIDMTWKEAIVQESIEPISEAQLKEELQT---LVDRFSPDRSVTFTLEAEV 123
Query: 121 LPQIEISS 128
+
Sbjct: 124 AAANKQEE 131
>gi|294670414|ref|ZP_06735296.1| hypothetical protein NEIELOOT_02133 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307878|gb|EFE49121.1| hypothetical protein NEIELOOT_02133 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 52
Score = 78.5 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVP 50
M V + E L+R++ + +P + + ++R++ KA I GFRPGK P
Sbjct: 1 MSVTLETLENLERKVTLSLPWSSINAECDKRLKQTARKARIDGFRPGKAP 50
>gi|313905470|ref|ZP_07838834.1| peptidylprolyl isomerase FKBP-type [Eubacterium cellulosolvens 6]
gi|313469654|gb|EFR64992.1| peptidylprolyl isomerase FKBP-type [Eubacterium cellulosolvens 6]
Length = 397
Score = 77.7 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 52/342 (15%), Positives = 128/342 (37%), Gaps = 13/342 (3%)
Query: 114 LRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKV 173
+ Y + I++ ++ ++T+ V + E++ + + + + +++GD V
Sbjct: 62 IEGDYKLSECIKLGNYKGYKLTKTETIVTDAEVEAYIQTMLSQ-TEVQDENATAQLGDTV 120
Query: 174 TVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+ Y +D + N ++GS +VG+K G+ K+I+ FP+D+S
Sbjct: 121 NMAYVGKIDGEEFSGGTSDNADLLLGSGQFIDGFETGVVGMKKGETKDIKVKFPDDYSAS 180
Query: 234 DLAGKKVRLNFSIKEVFS-PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQK 292
+AGK+ ++ + G + R ++++ +
Sbjct: 181 AVAGKEAVFTVTVNSIKRASQLTDEWVKNRKEEGVNTVEEYRAARRKELQAQDNNNNDDE 240
Query: 293 VKRQILDYISN-KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
++ ++ I N + +P+ E+ ++++ + +
Sbjct: 241 LRAEVWQRIVNSSKYYKLPKKYEEDAEKEYEERLKSAAEGYGLSLDDYLASAGMTQDNLA 300
Query: 352 MLAKRRVLT----GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
K+ T I+L E ++V E + L + F E+++ + N
Sbjct: 301 AQKKQYGYTIAQSRILLEAFCEAEGLKVGSAEYKEELQKVAETFDMTEEELKE-----QN 355
Query: 408 ALAELRAPIFEDKVIDHILKSVQIV-DRKVTFDQLFDNSSES 448
++ + ++ IL +I ++K + D +SSES
Sbjct: 356 GEEDVEQYVLTQMAVNKILSYAKITVEKKTSTDNEVSSSSES 397
>gi|295093552|emb|CBK82643.1| trigger factor [Coprococcus sp. ART55/1]
Length = 409
Score = 77.0 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 108/278 (38%), Gaps = 15/278 (5%)
Query: 161 EVKETESEIGDKVTVDYTVSVDNVILEDQS--KKNVQFIVGSADLFSETTEILVGLKTGD 218
+ +E++ GD V +D+ +VD + + ++GS + +VG K G+
Sbjct: 109 KDTTSEAKNGDTVNIDFVGTVDGEEFDGGNTNGSGYDLVLGSGSFIDNFEDQIVGHKPGE 168
Query: 219 QKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNND-LAVRLGFESESAMRGLC 277
+ FPE++ +L GK + ++ + P N++ +A +++ +
Sbjct: 169 TFTVNVTFPENYGKDELNGKAAKFETTLNYIKIDKPATYNDELVANNTSYKTTAEYEASV 228
Query: 278 SQKIKQHSEFLVRQKVKRQILDYISNK-YTFDVPESLVENEYNGILQKVRFEMSSANQKS 336
+++KQ E + +++ + N ++ V+ + I+ ++ + + +
Sbjct: 229 REQLKQDKEDSALASAQNEVMVAVINNSTIENISADDVQANADKIITSIKTQAETNGIEY 288
Query: 337 QNVDSIDEE------DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGR 390
QY + + +V+ I +K NI VT++E + +
Sbjct: 289 DTYIYYYYGYDDSAAFEQYVQQVCEESQKERMVVCAIAKKENISVTDDEADKYIADYATK 348
Query: 391 FPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS 428
E + + E++ +KV++ ++ +
Sbjct: 349 NSVDESTLRQNLTDV-----EIKYNALAEKVMNFLMDN 381
>gi|160878362|ref|YP_001557330.1| peptidylprolyl isomerase FKBP-type [Clostridium phytofermentans
ISDg]
gi|160427028|gb|ABX40591.1| peptidylprolyl isomerase FKBP-type [Clostridium phytofermentans
ISDg]
Length = 346
Score = 77.0 bits (187), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/320 (12%), Positives = 116/320 (36%), Gaps = 13/320 (4%)
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD--KVTVDYTVS 180
+ + + ++VT + E+ E+++++Q+ K +++ + V +DY
Sbjct: 30 DVTLGQYKGIEVTVEPVEITEEQVNQQLDNFNKQKGKDVKITDRTDVRNGDTVNIDYVGK 89
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS-IKDLAGKK 239
VD + + +GS L+G G+ ++ FP + DLAGK
Sbjct: 90 VDGKEFDGGKGEGYNLEIGSNSFIDGFESGLIGKNVGETADVPVTFPNPYDSNPDLAGKD 149
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + + +++ + +E+ A + + + +E + + + I+
Sbjct: 150 AVFTVTVNYLTDGNKEPLTDEVVKQNSDYETIDAYKDYIKTALTESAEQQAQTQKEIDII 209
Query: 299 DYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN------QKSQNVDSIDEEDLQYYHM 352
+ TF E + ++ ++S +E+
Sbjct: 210 QKAIDNTTFKNLEQKEYDAEETDMRAYYTSVASQYGVDLKTYILYFFGMSEEQFNTEIKK 269
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
A+ V ++L + + +++T+EE + + + + + K +
Sbjct: 270 AAEFNVKQRLMLDEVVKTEKLDITDEEYTDKVTEYTEQNNYKTVEEFEEAYKGKE---NV 326
Query: 413 RAPIFEDKVIDHILKSVQIV 432
+ + +K +D ++ + +
Sbjct: 327 KIALLREKALDFVINAAVVK 346
>gi|66775682|gb|AAY56398.1| trigger factor [Rickettsia peacockii]
Length = 202
Score = 77.0 bits (187), Expect = 7e-12, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 4/199 (2%)
Query: 253 LPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPES 312
P V++++ A + S +R +++I+ SE + +K + D + FDVPES
Sbjct: 2 EPTVIDDEFAKKFQSNSLEELRTHFTKQIENESEEAINTIMKMNLFDKLEKLLDFDVPES 61
Query: 313 LVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNN 372
L+E E N + + +E YY+ LA RRV G++L + N
Sbjct: 62 LLEQEKNILKSGTDKNEQDESLLKD---KSSKEITAYYNKLALRRVRIGLLLAEYAKSKN 118
Query: 373 IEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS-VQI 431
+++ ++++ + QQ FPG E + D ++ P A+ L+ P EDK + +I +++
Sbjct: 119 LQLEPDDLRKVIMQQARNFPGQENMIFDFYKNNPRAIEGLKGPALEDKAVQYIFNHEIKL 178
Query: 432 VDRKVTFDQLFDNSSESSP 450
++K T ++L
Sbjct: 179 KEKKYTKEELEKYLEAEEQ 197
>gi|225575565|ref|ZP_03784175.1| hypothetical protein RUMHYD_03657 [Blautia hydrogenotrophica DSM
10507]
gi|225037198|gb|EEG47444.1| hypothetical protein RUMHYD_03657 [Blautia hydrogenotrophica DSM
10507]
Length = 384
Score = 77.0 bits (187), Expect = 7e-12, Method: Composition-based stats.
Identities = 48/347 (13%), Positives = 130/347 (37%), Gaps = 17/347 (4%)
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV 175
+ D +++ + +++T+++ +V E++I + K N + ++ GD V +
Sbjct: 48 IDVDPAKYVKLGDYKGMELTKEVQDVTEEQIQATIDSDLKTNAKTLGEGETAQSGDIVNI 107
Query: 176 DYTVSVDNVILEDQS--KKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
DY VD + S + +GS + LVG K G+ +++ FPED+ +
Sbjct: 108 DYVGKVDGKEFDGGSTDGQGTDLELGSGSYVEGFEDQLVGAKAGETRDVNVTFPEDYGSE 167
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSE-----FL 288
+LA K ++ + P + +A ++ R + +++ +E L
Sbjct: 168 ELASKDAVFTVTVNSIKRPAELTD-EWVAENTDVKTVDEYRKSIVEDLEKSAEESSQINL 226
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
+ KY D+ + + + + ++ + + + + +++
Sbjct: 227 GNTAWNNLVSGSEIKKYPEDLLKEETDLVKSQMEEQCKAYGIELSDFLEQMGMNEDDYNT 286
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
AK + +V + + + + +E+ + + ++ +A
Sbjct: 287 QCEETAKSNLQMIMVAQAVINQEGLSLDDEKSDQIREEMAANYG---------YESVDDA 337
Query: 409 LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
+ + F V ++K + + K+ + + + +PE +
Sbjct: 338 MKQAGEERFNQNVGIEVVKQFLVDNAKIDTGEATPAADDEAPEDAQE 384
>gi|163815690|ref|ZP_02207062.1| hypothetical protein COPEUT_01870 [Coprococcus eutactus ATCC 27759]
gi|158448995|gb|EDP25990.1| hypothetical protein COPEUT_01870 [Coprococcus eutactus ATCC 27759]
Length = 411
Score = 75.0 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/315 (13%), Positives = 116/315 (36%), Gaps = 16/315 (5%)
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTVSV 181
+E+ + ++ T+ EV + E+ +++ E F + ++ GD V +DY SV
Sbjct: 65 NVELGDYKGIEYTKTDVEVTDDEVQQKIDEFVDGLGTFDKDTTNAAKKGDTVNIDYVGSV 124
Query: 182 DNVILEDQS--KKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKK 239
D + ++GS + ++G K G+ + FPE++ LAGK+
Sbjct: 125 DGEEFNGGNTNGSGYDLVLGSGAFIDNFEDQIIGHKPGETFTVTATFPENYGETSLAGKE 184
Query: 240 VRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
++ + P N+ L +++ +++ + E + I+
Sbjct: 185 AEFKTTLNYIKIDKPATYNDKLVSDNTDYKTTKEYEESVREELNKSKEDSALASAQSDIM 244
Query: 299 DYIS-NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI------DEEDLQYYH 351
+ N ++ V+ ++ ++ + + ++ Q +
Sbjct: 245 TKVINNCKISNLSAEEVQASAQQLVTSIKSQAENYGMDYATYIKYYYGYDDEDAFAQVIY 304
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+ + + +V+ I + + VT++E + + E+ + + +
Sbjct: 305 NICEESLKEKMVMCAIAKAEGLTVTDQETDEYIADYAAKNNVDEESVRSNVSAI-----D 359
Query: 412 LRAPIFEDKVIDHIL 426
++ KV++ +L
Sbjct: 360 IKYNALAYKVMNDVL 374
>gi|167760726|ref|ZP_02432853.1| hypothetical protein CLOSCI_03111 [Clostridium scindens ATCC 35704]
gi|167661613|gb|EDS05743.1| hypothetical protein CLOSCI_03111 [Clostridium scindens ATCC 35704]
Length = 351
Score = 74.3 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 49/305 (16%), Positives = 113/305 (37%), Gaps = 12/305 (3%)
Query: 133 QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKK 192
QV++ D+ D A + N ++ + + GD V +D+ +D V E S
Sbjct: 45 QVSKPDEITDKDVEDAIQATLQTNATTNDITDRAVKSGDTVNIDFVGKIDGVEFEGGSGT 104
Query: 193 NVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSP 252
+ +GS + +V GD + E FP++++ + AGK V ++K +
Sbjct: 105 DYPLTIGSGQFIEGFEDSVVDHNIGDTYDWEGKFPDNYNKTEYAGKPVVFTITVKSISEQ 164
Query: 253 LPVVVNNDLAVRLGFESES------AMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYT 306
+ +N++ + +S++ ++ + + + QKV +++LD K
Sbjct: 165 VVPELNDEFVKTVSEKSKNVKEYKKEVKKQLEDDAQTTYKDTLTQKVWQKVLDNTKVKKY 224
Query: 307 FDVPESLVENEYNGILQKVRF--EMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVL 364
+ + + + + + S E+ AK V +V
Sbjct: 225 PKKKVKEISDSLVEQYKTAAEYYQTDYETFLKEQMGSSVEDFEAQVDEAAKSSVKQQLVT 284
Query: 365 GTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDH 424
I +K I++ ++E + L + + + K + + L+ + V +
Sbjct: 285 DAIADKEKIKMDDKEYEKQLKKIADAYGYEDIKAVKEAASEED----LKEIALNNMVKEW 340
Query: 425 ILKSV 429
+ +
Sbjct: 341 LTEHC 345
>gi|260587546|ref|ZP_05853459.1| trigger factor [Blautia hansenii DSM 20583]
gi|260541811|gb|EEX22380.1| trigger factor [Blautia hansenii DSM 20583]
Length = 390
Score = 73.9 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 109/292 (37%), Gaps = 10/292 (3%)
Query: 154 AKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVG 213
++ + D V +D+T +D E S + ++GS + + LVG
Sbjct: 97 MSQYKVEVTEDRAVQQDDIVNIDFTGYMDGEEFEGGSAQGEDLLIGSGSMIEGFEDGLVG 156
Query: 214 LKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAM 273
K G++ ++ FP D+ +L GK V+ I + P + + A +++
Sbjct: 157 HKKGEEVTLDLTFPVDYRATELQGKAVQFKVKINSIS-VKPELTDEWAAANTDYKTVEEF 215
Query: 274 RGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN 333
R + +++ + +VK + + F + + +++ +M A
Sbjct: 216 RAAEKEAMQKSIDLEYEGQVKSDLFSMVVEATEFKEYPEALLEQGKKDVRERLDQMYQAQ 275
Query: 334 QKS------QNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQ 387
+ + +EE Q + + +++ I IE++EE+ + +
Sbjct: 276 FQMTLDDYVKQQGISEEEVEQVLTESTQTYLQQNLIVQAIFNAEGIEMSEEDYTAEEAKF 335
Query: 388 LGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFD 439
+ + + + L L+ + +K D I+++ + +++ D
Sbjct: 336 AELNGFPDVETMKMYYGD---LNVLKDSVLWNKACDVIVETATVTEQEPEAD 384
>gi|240144534|ref|ZP_04743135.1| putative peptidyl-prolyl cis-trans isomerase, FKBP-type [Roseburia
intestinalis L1-82]
gi|257203444|gb|EEV01729.1| putative peptidyl-prolyl cis-trans isomerase, FKBP-type [Roseburia
intestinalis L1-82]
Length = 427
Score = 73.9 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 53/348 (15%), Positives = 119/348 (34%), Gaps = 19/348 (5%)
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ D+ + D K+ QM + +T GD V VDY +D V ++ S
Sbjct: 77 ITGDYDVDDQDAKDYFEQMFSYYGPFYVADDTKTTVGDGDIVNVDYVGKLDGVAFDNGSA 136
Query: 192 KNVQFIVGSA--------DLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
++ V + T+ L G GD + + FP+++ DLAGK+V
Sbjct: 137 EDQNIDVDNNCSAGSQSSSFIDGFTDDLKGASVGDVIDSDVTFPDNYGNADLAGKQVVFT 196
Query: 244 FSIKEVFSPLPVVVNNDLA--VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
F++ + + + +D + ++ M ++ + + +Y+
Sbjct: 197 FTVNSIQKEMTLDDVDDDFAQKQFQADTVDDMYAQIKSFLESQASSNKDSDTYTAVQEYL 256
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSA------NQKSQNVDSIDEEDLQYYHMLAK 355
D+PE + N ++ + S + +E Q + +
Sbjct: 257 LENCKVDIPEDYLTARVNDYEKQYVQNYCDGDASKLEDYVSSQYNMTLDEVRQEWKSGME 316
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL---AEL 412
+ + + G I K E+ E+ S + + + L Y +A L
Sbjct: 317 KNISMEFITGAIAAKEGTELDEDGFSSYVQTLMSNNSLSSEDDLYKNYGYGDAAYGEKYL 376
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKV 460
R ++ + + + + + + + + P++ +D +
Sbjct: 377 RQVYVDNLALQSVKDNADVTVEAPAETESTEGTESAEPQEAVDAAETE 424
>gi|217032889|ref|ZP_03438366.1| hypothetical protein HPB128_152g6 [Helicobacter pylori B128]
gi|216945383|gb|EEC24051.1| hypothetical protein HPB128_152g6 [Helicobacter pylori B128]
Length = 105
Score = 73.9 bits (179), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 37/85 (43%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + K + L L +++ + I K I GFR GKVPLS +K+ Y
Sbjct: 1 MNLEVKKIDTANARLSAKPSIENLEKRYDKIAQKIAQKVKIDGFRRGKVPLSLVKTRYQA 60
Query: 61 SILSETIDEIIKEIVPEILSKRDER 85
I + +E+I+E++ +
Sbjct: 61 QIEQDAQEEMIQEVLKNAFKELGIE 85
>gi|291538060|emb|CBL11171.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Roseburia intestinalis XB6B4]
Length = 427
Score = 73.9 bits (179), Expect = 6e-11, Method: Composition-based stats.
Identities = 53/348 (15%), Positives = 119/348 (34%), Gaps = 19/348 (5%)
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ D+ + D K+ QM + +T GD V VDY +D V ++ S
Sbjct: 77 ITGDYDVDDQDAKDYFEQMFSYYGPFYVADDTKTTVGDGDIVNVDYVGKLDGVAFDNGSA 136
Query: 192 KNVQFIVGSA--------DLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
++ V + T+ L G GD + + FP+++ DLAGK+V
Sbjct: 137 EDQNIDVDNNCSAGSQSSSFIDGFTDDLKGASVGDVIDSDVTFPDNYGNADLAGKQVVFT 196
Query: 244 FSIKEVFSPLPVVVNNDLA--VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
F++ + + + +D + ++ M ++ + + +Y+
Sbjct: 197 FTVNSIQKEMTLDDVDDDFAQKQFQADTVDDMYAQIKSFLENQASSNKDSDTYTAVQEYL 256
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSA------NQKSQNVDSIDEEDLQYYHMLAK 355
D+PE + N ++ + S + +E Q + +
Sbjct: 257 LENCKVDIPEDYLTARVNDYEKQYVQNYCDGDASKLEDYVSSQYNMTLDEVRQEWKSGME 316
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL---AEL 412
+ + + G I K E+ E+ S + + + L Y +A L
Sbjct: 317 KNISMEFITGAIAAKEGTELDEDGFSSYVQTLMSNNSLSSEDDLYKNYGYGDAAYGEKYL 376
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKV 460
R ++ + + + + + + + + P++ +D +
Sbjct: 377 RQVYVDNLALQSVKDNADVTVEAPAETESTEGTESAEPQEAVDAAETE 424
>gi|291534317|emb|CBL07429.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Roseburia intestinalis M50/1]
Length = 427
Score = 73.5 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 53/348 (15%), Positives = 119/348 (34%), Gaps = 19/348 (5%)
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ D+ + D K+ QM + +T GD V VDY +D V ++ S
Sbjct: 77 ITGDYDVDDQDAKDYFEQMFSYYGPFYVADDTKTTVGDGDIVNVDYVGKLDGVAFDNGSA 136
Query: 192 KNVQFIVGSA--------DLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLN 243
++ V + T+ L G GD + + FP+++ DLAGK+V
Sbjct: 137 EDQNIDVDNNCSAGSQSSSFIDGFTDDLKGASVGDVIDSDVTFPDNYGNADLAGKQVVFT 196
Query: 244 FSIKEVFSPLPVVVNNDLA--VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
F++ + + + +D + ++ M ++ + + +Y+
Sbjct: 197 FTVNSIQKEMTLDDVDDDFAQKQFQADTVDDMYAQIKSFLENQASSNKDSDTYTAVQEYL 256
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSA------NQKSQNVDSIDEEDLQYYHMLAK 355
D+PE + N ++ + S + +E Q + +
Sbjct: 257 LENCKVDIPEDYLTARVNDYEKQYVQNYCDGDASKLEDYVSSQYNMTLDEVRQEWKSGME 316
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL---AEL 412
+ + + G I K E+ E+ S + + + L Y +A L
Sbjct: 317 KNISMEFITGAIAAKEGTELDEDGFSSYVQTLMSNNSLSSEDDLYKNYGYGDAAYGEKYL 376
Query: 413 RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKV 460
R ++ + + + + + + + + P++ +D +
Sbjct: 377 RQVYVDNLALQSVKDNADVTVEAPAETESTEGTESAEPQEAVDAAETE 424
>gi|153853945|ref|ZP_01995278.1| hypothetical protein DORLON_01269 [Dorea longicatena DSM 13814]
gi|149753327|gb|EDM63258.1| hypothetical protein DORLON_01269 [Dorea longicatena DSM 13814]
Length = 374
Score = 73.5 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/305 (15%), Positives = 112/305 (36%), Gaps = 12/305 (3%)
Query: 133 QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKK 192
+V + D+ + + + +N EV + + GD T+D+ ++ + S
Sbjct: 53 KVDKPSEVTDDDVNTQIQSVLDENATTKEVTDRAVKKGDTATIDFVGKMNGKAFDGGSST 112
Query: 193 NVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSP 252
+ +GS + ++G K GD + FPE++ DLAGK V ++K +
Sbjct: 113 DYPLEIGSNSFIEGFEDSIIGHKIGDTFDWNGKFPENYGSSDLAGKDVTFTITVKSISQK 172
Query: 253 LPVVVNN--DLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYT-FDV 309
+ + V ++ + + +++ +E +++ + +
Sbjct: 173 NTPKLTDKLVKKVSKKSKTVKEYKEEVKKSLEEDNEKTYNDTLQQAAWQKVLDNTKVKKY 232
Query: 310 PESLVENEYNGILQKVRFEMSSANQKSQNVDSID-----EEDLQYYHMLAKRRVLTGIVL 364
PE V+ + ++ + + + N ++ E+ + AK V +V
Sbjct: 233 PEKDVKKIEDSLISQYKSVAKAYNMSYDDLIKQQMGTTVEKFEKQVTKAAKSSVKQTLVT 292
Query: 365 GTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDH 424
I +K NI++ + ++ L + + K L ++L+ D V +
Sbjct: 293 KAIADKENIKLDDATYKTELKKIAKEYGYDSVKALKKAAS----KSDLKEIALNDLVKEW 348
Query: 425 ILKSV 429
+
Sbjct: 349 LANQC 353
>gi|218135352|ref|ZP_03464156.1| hypothetical protein BACPEC_03257 [Bacteroides pectinophilus ATCC
43243]
gi|217990737|gb|EEC56748.1| hypothetical protein BACPEC_03257 [Bacteroides pectinophilus ATCC
43243]
Length = 391
Score = 73.1 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/323 (19%), Positives = 128/323 (39%), Gaps = 24/323 (7%)
Query: 131 DLQVTQDICEVDEKEIDRQMAEIAKNNV-AFEVKETESEIGDKVTVDYTVSVDNVILEDQ 189
+++V + +V + ++ + I + EV +++GDK+ +DY+ +++ V
Sbjct: 66 EVEVDRSALDVTQDQVTAYIDNIRSSKGENTEVTTGTTKLGDKIKLDYSGTLNGVAFSGG 125
Query: 190 SKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEV 249
+ +V++ +GS + + L GL+ G + +I F + +S DLAGK V N + +
Sbjct: 126 TATDVEYTIGSGRFIEDLDKGLAGLEVGREYDIPCHFDDSYSNSDLAGKDVNFNVKVNAI 185
Query: 250 FSPLPVVVNNDLAV--------RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
+ N+D ++ Q +K ++ + D I
Sbjct: 186 VTTTLPEYNDDFVKTIVATGSYDTQAQTTDEFTKYVEQTLKDSAQQSFDSNKYSAVWDKI 245
Query: 302 SNKYTFD-VPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDL------------Q 348
+ T PE + + I V+ E S +DS + +
Sbjct: 246 NETTTVSGYPEDEIADLKQTINDNVKSEYSYYGTYYSGIDSFESYLKNVYGFADEAAFNE 305
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGR-FPGHEKKMLDHF-QKYP 406
Y A+ + ++L IGEK ++ V+++E+ + + MLD QK
Sbjct: 306 YADQYARNYLKEKMILTLIGEKESVTVSDDEINEYGELIASQNNYDSYQSMLDSLGQKSD 365
Query: 407 NALAELRAPIFEDKVIDHILKSV 429
+ E+ + DKV D +L +
Sbjct: 366 DVKLEVGYAVLADKVSDILLNNA 388
>gi|58700084|ref|ZP_00374619.1| trigger factor, putative [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58533398|gb|EAL57862.1| trigger factor, putative [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 216
Score = 72.7 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 214 LKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAM 273
+K G+ K + FPE++ LAG++ + + E+ ++++A +GF+ S +
Sbjct: 1 MKKGETKNFKLKFPENYQAISLAGQEADFSVRVNEIQIAKDFENDDEIAKSIGFKDYSLL 60
Query: 274 RGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN 333
+ I + +K+++ DY+ Y+FD+P +V+ E +
Sbjct: 61 INHAKKMIGDQCTEMRNLLIKKELFDYLDANYSFDLPTDIVKQEQQRM------------ 108
Query: 334 QKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPG 393
+ A++RV ++ ++ I +T+ ++ S + Q
Sbjct: 109 -------EGELGAQNDSRKEAEKRVKLAMLFMKFSAEHKISLTQNDVLSVIVNQYVSKDV 161
Query: 394 HEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQL 441
++L HF+ +R E KV D+I++ V ++ ++ +L
Sbjct: 162 QFDRVLKHFESNKQFQELVRGQALEYKVTDYIIEKVSKEEQIISVKEL 209
>gi|225377740|ref|ZP_03754961.1| hypothetical protein ROSEINA2194_03391 [Roseburia inulinivorans DSM
16841]
gi|225210417|gb|EEG92771.1| hypothetical protein ROSEINA2194_03391 [Roseburia inulinivorans DSM
16841]
Length = 410
Score = 71.6 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 54/350 (15%), Positives = 123/350 (35%), Gaps = 27/350 (7%)
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ D+ + D + ++ + +T E GD V VDY +D + +
Sbjct: 71 ISGDYDVTDQDVLDYVEKIFTQGGPFYTADPDKTTVEEGDIVNVDYVGKLDGEAFDGGTA 130
Query: 192 KNVQF------IVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI-KDLAGKKVRLNF 244
++ + T+ LVG GD + FP+++ DLAGK+V F
Sbjct: 131 EDQNIDVSNNSSTSGSGYIDGFTDGLVGASVGDVIDSNVTFPDEYPNNPDLAGKEVVFTF 190
Query: 245 SIKEVFSPLPVVVNNDLA--VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
++ + + + +D + G +S + Q ++ +E + + + DY+
Sbjct: 191 TVNSIQKEVTMDTMDDEFASKQFGADSVDGVYKQVRQYLESSAESTHKNDIYSALEDYLL 250
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMS-----SANQKSQNVDSIDEEDLQYYHMLAKRR 357
T D+P + I + +E Q + +
Sbjct: 251 ENCTVDMPADYRSDVIEAIRANFIDRYCSGDESQMETVLSSYGYTEESIEQEWSDSVESS 310
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL---AELRA 414
+ +++ I EK +I++ + E + + + + L Y +++ ++R
Sbjct: 311 IKLELIVKAIAEKEDIQIDDTEFEDYVSTIVSSGGFGDADTLYSNYGYGDSVYGKNQIRV 370
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQ 464
V+D + ++ ++ + V E + E + S T +
Sbjct: 371 IYLAGLVLDKLAETAEVTENAV----------EETTESVESTESADSTEE 410
>gi|115374899|ref|ZP_01462172.1| hypothetical protein STIAU_4143 [Stigmatella aurantiaca DW4/3-1]
gi|115368117|gb|EAU67079.1| hypothetical protein STIAU_4143 [Stigmatella aurantiaca DW4/3-1]
Length = 183
Score = 71.2 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 67/164 (40%), Gaps = 1/164 (0%)
Query: 267 FESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVR 326
E+ A+R +++ + + + ++ + + F+VP+++VE + +L+
Sbjct: 19 VETLEALRAKVKADLERSQRTKIDAEDRDTVIKGLIERNPFEVPKAMVERAIDSMLEGAM 78
Query: 327 FEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ 386
+M+ + +N++ + A + V ++ I EK I+ TE +++ +
Sbjct: 79 RQMARSGLDVRNLNLDFLRLREEMRERAIQEVKGTLLFEAIAEKEGIQATEGDVEKKIED 138
Query: 387 QLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ 430
+ +F+ + L + E+K I+ + +
Sbjct: 139 LAAEAGQPVSAVRKYFKSAEERMG-LSLRLREEKTIEFLKAQAK 181
>gi|218134268|ref|ZP_03463072.1| hypothetical protein BACPEC_02161 [Bacteroides pectinophilus ATCC
43243]
gi|217991643|gb|EEC57649.1| hypothetical protein BACPEC_02161 [Bacteroides pectinophilus ATCC
43243]
Length = 349
Score = 71.2 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 51/331 (15%), Positives = 131/331 (39%), Gaps = 10/331 (3%)
Query: 108 GTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES 167
+K+ + + + + ++VT D + + ++ ++ + +
Sbjct: 25 CNSKIKVSFDCNAEDYVTLGQYKGIEVTVDTTAIRDSLVNEKVQNDLDEVTEYSGVSRGA 84
Query: 168 EIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADL-FSETTEILVGLKTGDQKEIERFF 226
+ D++T+ +T ++ ++ S + ++G T+ L +K G+QK I
Sbjct: 85 QDDDQLTLSFTGTIGGNSVDGFSSDSYTLVLGKDSFVIPGFTDALYNMKAGEQKIITLTI 144
Query: 227 PEDHSI-KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQH 284
PE +D A K++ +++V P+ ++ + A +++ + R + +K
Sbjct: 145 PEGIKDAEDYANKRIVYEIKMEKVEQPIVPMITDAYAKENFGYDTVAEYREALANDMKDT 204
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE 344
+ ++ K+ +L+ + + + N + L++ S+ S + D
Sbjct: 205 IDENIQNAKKQAVLEKLQDNAEVKGYPEDIVNSKSEDLERSIKFYSTMYGMSVDEYCQDR 264
Query: 345 EDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP-GHEKKMLDHFQ 403
+ + KR V +++ I +K ++ VTE E + L E+K ++ F
Sbjct: 265 YGISFDE-YVKRSVTQELIMQLIAQKEDLSVTEYEYKGNLASFAKDNGYSDEEKFVNDFG 323
Query: 404 KYPNALAELRAPIFEDKVIDHILKSVQIVDR 434
K + + K +D ++ S I ++
Sbjct: 324 KDK-----IVKNMLLQKAVDVVMGSAVINEK 349
>gi|58699445|ref|ZP_00374189.1| trigger factor, putative [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534038|gb|EAL58293.1| trigger factor, putative [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 144
Score = 70.0 bits (169), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSIL 63
E + LK E ++ + S+ + N R+++I A GFR GK+P + + Y L
Sbjct: 19 KELSIDKLKYEYEITVGSDYIKQKVNSRLQEIAENAKSPGFRAGKMPYDLVVANYKNEAL 78
Query: 64 SETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
I+ I +++ K + ++ + P + + G + +LS++
Sbjct: 79 EYVINNTIDYCSSDLMKKIEVKSHIYPKVDVISLP---DLGKENEEGNFVYKLSFE 131
>gi|160895080|ref|ZP_02075854.1| hypothetical protein CLOL250_02631 [Clostridium sp. L2-50]
gi|156863511|gb|EDO56942.1| hypothetical protein CLOL250_02631 [Clostridium sp. L2-50]
Length = 404
Score = 69.7 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 46/314 (14%), Positives = 123/314 (39%), Gaps = 17/314 (5%)
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTVDYTVSVDNVIL 186
+ ++ EV E ++ +++ + ++ + E K + ++ GD V +D+ +VD V
Sbjct: 69 EYKGIEYEYAPAEVTEDDVQKKVDDFVESCATYNEDKTSAAKSGDTVNIDFVGTVDGVEF 128
Query: 187 EDQS--KKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNF 244
+ + +GS L + +VG K GD ++ FP+ + D+ GK
Sbjct: 129 DGGNTNGSGYDVTLGSKSLIDTFEDQIVGHKAGDTFDVNVTFPDGYG-NDMDGKAAVFKT 187
Query: 245 SIKEVFSPLPVVVNND-LAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS- 302
++ + P+ N+ +A +++ + ++K +E + ++ +
Sbjct: 188 TLNYIKIPVEAEYNDALVAANTSYKTTAEYEESIRSELKASNEATALTSAQNVVMTNVIN 247
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV------DSIDEEDLQYYHMLAKR 356
D+P V + + I+ +++ + S+ ++ +Y + + +
Sbjct: 248 KATIEDIPAEEVSSLADEIITQLKSQASNYGIDYATFIQYYYGYEDEDSFKEYVNQICQE 307
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
V V+ + + NI + ++ + + + E + + + +L
Sbjct: 308 SVKEKKVVCAVAKAENITIDSDDETAYIKKLAEENDATEDSVKEQYSS-----QDLMYYT 362
Query: 417 FEDKVIDHILKSVQ 430
DKV+ +L + +
Sbjct: 363 LADKVMTFLLDNGK 376
>gi|197303985|ref|ZP_03169017.1| hypothetical protein RUMLAC_02722 [Ruminococcus lactaris ATCC
29176]
gi|197296953|gb|EDY31521.1| hypothetical protein RUMLAC_02722 [Ruminococcus lactaris ATCC
29176]
Length = 373
Score = 69.7 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/315 (16%), Positives = 128/315 (40%), Gaps = 18/315 (5%)
Query: 133 QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKK 192
+V + D+ E Q ++ K+ +E GD V +DY+ SVD + +
Sbjct: 44 KVEKKEVSDDDVEQTIQSRLLSSGKTDGLTKDGAAEDGDWVNIDYSGSVDGTAFDGGTST 103
Query: 193 NVQFIVGSADLF------SETTEILVGLKTGDQKEIERFFPEDHSIK-DLAGKKVRLNFS 245
+GS E +VG K G++ +I+ FP+ + DL+GK +
Sbjct: 104 GYDLQLGSGTFLAATDDYKGFEEQIVGHKAGEEFDIQVQFPDPYQNNTDLSGKPADFHIV 163
Query: 246 IKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
+ +V++P + + + + +R + ++++ + +VK +I D +
Sbjct: 164 LNKVYAPAELTDEWVASNDDSYTTVDELRKGLKETMQEYYDSQYDSQVKSEIEDKLLETS 223
Query: 306 T-FDVPESLVENEYNGILQKVR------FEMSSANQKSQNVDSIDEEDLQYYHMLAKRRV 358
P+ V+++ + I + + M ++ + + + +++ AK+ V
Sbjct: 224 EVKKYPDGAVDDKVSQIKESYETTVKNYYGMELSDFITSYLKTTEDDFNTKIEEQAKKTV 283
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
L I +K +E+++++ + + + +D +++ L+ I
Sbjct: 284 QLEQALRLIAKKEKLELSDKDYEKEMKTYAKNAGADD---VDSYKEQVGE-DNLKTMILC 339
Query: 419 DKVIDHILKSVQIVD 433
DKV+D ++ + +
Sbjct: 340 DKVLDFLVDNCKQTK 354
>gi|108758802|ref|YP_634284.1| peptidyl-prolyl cis-trans isomerase [Myxococcus xanthus DK 1622]
gi|108462682|gb|ABF87867.1| peptidyl-prolyl cis-trans isomerase, FKBP-type, trigger family
[Myxococcus xanthus DK 1622]
Length = 396
Score = 69.7 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/268 (14%), Positives = 98/268 (36%), Gaps = 6/268 (2%)
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEIL-VGLKTGDQKEIERFFPED 229
D+V ++ D ++ ++ + + + +E + G K G+ +I PE
Sbjct: 121 DEVRLNIVGYCDGKLIPFSARFGMTTELAPIEALPGFSEAVAEGAKVGESLQIALELPET 180
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF--ESESAMRGLCSQKIKQHSEF 287
+ ++ L GK R + + + + M +++ +
Sbjct: 181 YPVEALQGKPARFLVDVLAAHEVTLPSESAPEFLEKLGLGSTLGEMMTHLRDELEDAAAA 240
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEE-- 345
+ + + +LD + + ++P +LV+ E + + +Q + +
Sbjct: 241 QLWVQARDMVLDELVRRAPVELPRALVDEELRRRWVQAEGQGMLEHQFDVDEQREALQGW 300
Query: 346 -DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQK 404
+RR+ GIVL I E+ +++T E+++ + QL F ++
Sbjct: 301 LTDPTTRADVERRLHIGIVLKAITEEQKLQLTPEKLEQLVRDQLEPFGLTAADAHAALRE 360
Query: 405 YPNALAELRAPIFEDKVIDHILKSVQIV 432
P +L + ++H++ ++
Sbjct: 361 SPETTKQLAEMGWYLLAVEHVMNKAKVT 388
>gi|291546378|emb|CBL19486.1| trigger factor [Ruminococcus sp. SR1/5]
Length = 451
Score = 69.3 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 55/381 (14%), Positives = 147/381 (38%), Gaps = 18/381 (4%)
Query: 96 EGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAK 155
E + D +L D+ + I + L + + V + +D ++ E +
Sbjct: 55 EETDSNKDSEEAASGDTRLVSVDDVSKYVTIGEYKGLTLDNTVEAVTDDMVDGRIKEELQ 114
Query: 156 NNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLK 215
N EV E + GD V ++Y + D V + + N + +GS + ++G+K
Sbjct: 115 NKAE-EVTEGSVQNGDVVIINYVGTKDGVAFDGGTANNYELTIGSGTFIDGFEDGIIGMK 173
Query: 216 TGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRG 275
G+ K+++ FP+++S ++LAG++V +++ F P + + +A +S +
Sbjct: 174 KGETKDLDLTFPKEYSSEELAGQEVVFKVTLQS-FKRAPELTDTWVAKNTDCKSVDDYKK 232
Query: 276 LCSQKIKQHSEFLVRQKVKRQILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSANQ 334
++ ++ + ++ + + + + P+ ++ +
Sbjct: 233 EIRTTLEDEAKTSAQNTLRETAWNTVLSASEVKEYPQEDLDTAKTEFRSLYENYAKQGDM 292
Query: 335 KSQNVDS----IDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGR 390
++ ++ + A+ +V +++ I + N+ + +++ S + +
Sbjct: 293 TLEDFVKAQGISMDDFEEQSGQYAEFKVKQNLIVQGIMDAENMTLEDKKSLSIQDELIKA 352
Query: 391 FP-GHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
+ ++D + + A + I +V D IL + + ++ ++ +
Sbjct: 353 YSVKDLAALVDKYGQ-----AAVDESIGLLRVEDFILDNATVEEKVS-----AGDTQGVN 402
Query: 450 PEKLLDKSSKVETFQSEEAPS 470
+ S VE EE +
Sbjct: 403 GDDPSSDGSSVEGTVDEELEA 423
>gi|160878442|ref|YP_001557410.1| peptidylprolyl isomerase FKBP-type [Clostridium phytofermentans
ISDg]
gi|160427108|gb|ABX40671.1| peptidylprolyl isomerase FKBP-type [Clostridium phytofermentans
ISDg]
Length = 401
Score = 69.3 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/335 (14%), Positives = 112/335 (33%), Gaps = 21/335 (6%)
Query: 111 DLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEI 169
D D + + + ++ E ++ + + +A + + +
Sbjct: 75 DKGFIDGVDASSLLNLVDYKTIKAPLSEIEYSDESVAKDIATAVEAKKTLNKETDAAIAD 134
Query: 170 GDKVTVDYTVSVDNVILEDQSKKN--VQFIVGSADLFSETTEILVGLKTGDQKEIERFFP 227
G+ V +DY ++D + + + + +GS L + E L+G K GD+ + FP
Sbjct: 135 GNIVNIDYVGTIDGKEFDGGNTNDNGYELKIGSKKLVDDFEEQLIGHKIGDEVTVNVTFP 194
Query: 228 EDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEF 287
ED++ KDLAGK I + + E S + +
Sbjct: 195 EDYTNKDLAGKDAEFKVKINGI--YDVPEFTDAFVKENLSEYASNVEEYKKYLKDTNYAS 252
Query: 288 LVRQKVKRQILD----YISNKYTFDVPESLVENEYNGILQKVRFEMSS------ANQKSQ 337
+ + + D + + +SL++ + N +
Sbjct: 253 TLNTYIVSYLADNTTVTSYPEKYVKLSKSLLKFSDQSYYNSMNQYYMENLGAPAYNSFEE 312
Query: 338 NVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK 397
+ E + A+++V ++ I EK + VT ++ + L Q G+
Sbjct: 313 YTGVSEAEYDKSLAEPAEKQVKAALIYQAILEKEGVTVTADDYIAYLESQ-GQTKEDFDN 371
Query: 398 MLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
++ + K ++ K ++ + V +
Sbjct: 372 QVETYGKNFVLQEMVKI-----KALELVKGMVTVE 401
>gi|153811633|ref|ZP_01964301.1| hypothetical protein RUMOBE_02025 [Ruminococcus obeum ATCC 29174]
gi|149832374|gb|EDM87459.1| hypothetical protein RUMOBE_02025 [Ruminococcus obeum ATCC 29174]
Length = 289
Score = 68.5 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/276 (13%), Positives = 101/276 (36%), Gaps = 12/276 (4%)
Query: 203 LFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLA 262
+ + ++G+K G+ KE++ FP+D+ + +AGK V ++++ P + +A
Sbjct: 1 MIDGFEDGIIGMKKGETKELDLTFPDDYYEESVAGKPVVFKVTLQKFTRPSELND-EWVA 59
Query: 263 VRLGFESESAMRGLCSQKIKQHSEFL-----VRQKVKRQILDYISNKYTFDVPESLVENE 317
+++ R ++++++ + + +Y + + VE
Sbjct: 60 ANTEYKTVDEYRAAVKKELEENETKSADYDLYSNAWSEVLANSEVKEYPEEDVDKAVEAY 119
Query: 318 YNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTE 377
V+ + + +E+ + A+ +V +++ I + + + +
Sbjct: 120 KKLNENYVKEAGMEMSDFLKAQGMSEEDYEEDCQQYAESKVEQNLIVQGIMDAEGLSLDD 179
Query: 378 EEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVT 437
+++Q+ + L + L + L E I+ + + + T
Sbjct: 180 DDIQTLKDELLSEYGYESFDQLVAYYGEQEVNESLALMRVER----FIVDNATVNETSAT 235
Query: 438 FDQLFDNSSESSPEK--LLDKSSKVETFQSEEAPSE 471
+ + ++ E + +E SEE S+
Sbjct: 236 EADVANEDADPESEDTGVDAAEDTIEDNASEEDSSD 271
>gi|325263164|ref|ZP_08129899.1| trigger factor [Clostridium sp. D5]
gi|324031557|gb|EGB92837.1| trigger factor [Clostridium sp. D5]
Length = 361
Score = 67.7 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 112/296 (37%), Gaps = 21/296 (7%)
Query: 161 EVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLF------SETTEILVGL 214
E+ + ++ GD V +DY SVD V E S + +GS E + G
Sbjct: 69 EITDRAAKEGDTVNIDYKGSVDGVEFEGGSAEGANLELGSGSFIGANGDYKGFEEQIAGH 128
Query: 215 KTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE--SESA 272
KTG++ +I+ FP D+ +++ K N ++ + + ++ E +
Sbjct: 129 KTGEKFDIKVQFPSDYKNAEMSDKVAVFNITLNSISVVTVPELTDEWVKENSEESKTVEE 188
Query: 273 MRGLCSQKIKQHSEFLVRQKVKRQILDYIS------NKYTFDVPESLVENEYNGILQKVR 326
+ ++++++S+ + ++ ++++ + V E +
Sbjct: 189 YKKEIKKQLEENSKESTKNTLQNEVMEALLGQIEVKKYPEDQVDEQIQSINEYYSGMAEA 248
Query: 327 FEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ 386
+ M + Q + +E+ A+ V + I ++ +E +++E + + +
Sbjct: 249 YGMEFKDFAEQYMGLSEEDFKTQAKEAAQTAVQRSLACELIAKEKKLEPSDKEYEEQIAK 308
Query: 387 QLG-RFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS-VQIVDRKVTFDQ 440
+ + + L+ I + KV +++ VQ+ + + D+
Sbjct: 309 YAEGSGYETVDEFKEQVGED-----VLKRTILQQKVAEYLADKCVQVEQSESSADE 359
>gi|126668930|ref|ZP_01739871.1| trigger factor [Marinobacter sp. ELB17]
gi|126626593|gb|EAZ97249.1| trigger factor [Marinobacter sp. ELB17]
Length = 147
Score = 67.3 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLA 354
++D + N FDVP SLV+ E + + + Q + + A
Sbjct: 1 NDVVDALLNSTEFDVPASLVDQEIDRVRKDAVQRFGGEMDFQQ-------LPKEIFEEQA 53
Query: 355 KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRA 414
RRV TG++ + +KN + E+++ + + + ++++ HF P +++ +
Sbjct: 54 TRRVKTGLLFQEVVKKNELTADAEKVEEKIQEIASTY-EQPEEVIAHFNSSPEQKSQIES 112
Query: 415 PIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ ED V++++L QI ++ + +++
Sbjct: 113 TVLEDAVVEYVLGRAQITEKAMKYEEAIQ 141
>gi|226501210|ref|NP_001141889.1| hypothetical protein LOC100274034 [Zea mays]
gi|194706316|gb|ACF87242.1| unknown [Zea mays]
Length = 249
Score = 66.6 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 11/138 (7%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKAN-IKGFRP---GK---VPLSHI 54
+ +G K + V +P F+E + + A + GFR GK +P S +
Sbjct: 100 KTSVVSRDGEKINVRVQLPGKATQKVFDEALTFLARDAPPVPGFRKSKGGKTSNIPSSIL 159
Query: 55 KSLYGKS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLK 113
+ GKS + + EI+ + E + K + + +P I + E ++ S
Sbjct: 160 LQMLGKSRVTKFVLQEILSITIEEFVKKENLKV--KPEIQTTQSEGEMESA-FAPGSAFG 216
Query: 114 LRLSYDILPQIEISSFDD 131
+ + +
Sbjct: 217 FNVVLQLETPDSDDPEEK 234
>gi|224035315|gb|ACN36733.1| unknown [Zea mays]
Length = 235
Score = 65.4 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 11/138 (7%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKAN-IKGFRP---GK---VPLSHI 54
+ +G K + V +P F+E + + A + GFR GK +P S +
Sbjct: 86 KTSVVSRDGEKINVRVQLPGKATQKVFDEALTFLARDAPPVPGFRKSKGGKTSNIPSSIL 145
Query: 55 KSLYGKS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLK 113
+ GKS + + EI+ + E + K + + +P I + E ++ S
Sbjct: 146 LQMLGKSRVTKFVLQEILSITIEEFVKKENLKV--KPEIQTTQSEGEMESA-FAPGSAFG 202
Query: 114 LRLSYDILPQIEISSFDD 131
+ + +
Sbjct: 203 FNVVLQLETPDSDDPEEK 220
>gi|317500706|ref|ZP_07958924.1| hypothetical protein HMPREF1026_00867 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089819|ref|ZP_08338712.1| trigger factor tig [Lachnospiraceae bacterium 3_1_46FAA]
gi|316897900|gb|EFV19953.1| hypothetical protein HMPREF1026_00867 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330403516|gb|EGG83074.1| trigger factor tig [Lachnospiraceae bacterium 3_1_46FAA]
Length = 369
Score = 65.0 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/303 (16%), Positives = 114/303 (37%), Gaps = 19/303 (6%)
Query: 163 KETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFS------ETTEILVGLKT 216
K+ +E GD V +DYT +D+V E + +GS + ++G T
Sbjct: 72 KDRAAEKGDWVNIDYTGYIDDVAFEGGTATGSDLELGSGSFIGAEGGYAGFEDQIIGHST 131
Query: 217 GDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRL--GFESESAMR 274
G++ +IE F + + D+AGK R + + E++ + ++ ++ R
Sbjct: 132 GEEFDIEVKFSDSYPGTDVAGKVARFHIVLNEIYKQNIPELTDEWVASNSKTAKTADEYR 191
Query: 275 GLCSQKIKQHSEFLVRQKVKRQILDYISNKYT-FDVPESLVENEYNGILQKVRFEMSSAN 333
++I+ +E +K +I + + + P+ VE + +
Sbjct: 192 KEVRKQIESSAETANETTLKSEIQEALLEEIDVKKYPKDAVEEQKKQMTDYYTQMAGLYG 251
Query: 334 QKSQN-----VDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQL 388
+ + ++E A++ + I EK +E +E+E + +
Sbjct: 252 IELSEFITTYLQMTEDEFNSKVKESAQQTAAFDEAIKLIAEKQKLEPSEKEYKEKFKEYA 311
Query: 389 GRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
+ ++ + L+A I D V+D+++ + V+ + N+ E
Sbjct: 312 EQAGADVDAYVEQVGED-----VLKAAILRDAVLDYLVDNCVQVENSDSDADSNSNNKED 366
Query: 449 SPE 451
S +
Sbjct: 367 SSK 369
>gi|219666764|ref|YP_002457199.1| trigger factor domain protein [Desulfitobacterium hafniense DCB-2]
gi|19421889|gb|AAL87777.1|AF403184_2 unknown [Desulfitobacterium hafniense DCB-2]
gi|219537024|gb|ACL18763.1| trigger factor domain protein [Desulfitobacterium hafniense DCB-2]
Length = 317
Score = 64.6 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/316 (14%), Positives = 114/316 (36%), Gaps = 16/316 (5%)
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAK--NNVAFEVKETESEIGDKVTVDYTVS 180
Q E+ + L V + V+E E + MA + + E + E GD V V+
Sbjct: 3 QFELGPYTGLNVKKFNIAVEEDEFNGAMAYVRESLTETRIEKENDPVEPGDYVVVNIEGE 62
Query: 181 VDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH-SIKDLAGKK 239
+ + + +K+ +F VG ++ + + L+G K G + DL G +
Sbjct: 63 ENGIPIPSVKQKSFKFRVGDENVLGDFSSNLLGRKRGQTVTFDVVLKPVLLEFADLWGHR 122
Query: 240 VRLNFSIKEVFSPLPVVVNNDLA--VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI 297
V I VF+ + +++ + G + + + + +I Q + + ++
Sbjct: 123 VTFTVEIVNVFALKEPELTDEVIRRIEPGVSTLQEFKEVLAAEITQEKKTRAQGANIDRV 182
Query: 298 LDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN-----QKSQNVDSIDEEDLQYYHM 352
I+ + ++ ++ + ++ E+ + + +E L
Sbjct: 183 FQAIAGRCKYEFDPEVLNQAAENLYRQFAEELKTIHGVELINYLMYRKLSSDELLAECKQ 242
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
+ R++L ++ + + + E ++ + G ++ AL +
Sbjct: 243 ESARKILGEAIMDAVIQAEGFRIPAERLEKEQEKLAKNRQGDQE------FDSVAALKKA 296
Query: 413 RAPIFEDKVIDHILKS 428
+ K ++ +L+
Sbjct: 297 ETQLLRRKAMEFLLEQ 312
>gi|255994800|ref|ZP_05427935.1| trigger factor [Eubacterium saphenum ATCC 49989]
gi|255993513|gb|EEU03602.1| trigger factor [Eubacterium saphenum ATCC 49989]
Length = 369
Score = 64.6 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 107/287 (37%), Gaps = 11/287 (3%)
Query: 147 DRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSE 206
+ + K + ++ + + +V +DY D + K +GS +
Sbjct: 56 NDAVQNRIKGQMQYKEVKGAVKDNYRVNIDYAGKKDGKSFAGGTAKGYTLTLGSNQFIKD 115
Query: 207 TTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-- 264
+VG+K G +K I FP+ + K+LAGKKV + + V P+ + +
Sbjct: 116 LENGIVGMKKGQKKTINATFPKTYHSKELAGKKVTFDVKVNRVEEPVKSKNDAAYYKKLS 175
Query: 265 -LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDV-----PESLVENEY 318
++ ++ + +++++ +E + +K + K ++ +
Sbjct: 176 QNKAKNMDELKKVIKKELEKANENRAEEMMKSNAWSKVMAKVKVKKLPEDDVKAAEDIIK 235
Query: 319 NGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEE 378
Q + + S Q + ++ + A+ V T + + E IE + +
Sbjct: 236 GRNEQLRKQQKQSMAQYLKQRGIDEKAYNKEVTTQAENEVKTKMAYMFVCEAEKIEPSSD 295
Query: 379 EMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHI 425
+++ + ++ + +K + + K ++ +++ D +
Sbjct: 296 DIKKRV-EEYKKMGYDDKSIKKYTGKNLE--DTVKDELYQKAAKDFV 339
>gi|160878908|ref|YP_001557876.1| peptidylprolyl isomerase FKBP-type [Clostridium phytofermentans
ISDg]
gi|160427574|gb|ABX41137.1| peptidylprolyl isomerase FKBP-type [Clostridium phytofermentans
ISDg]
Length = 351
Score = 64.3 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 63/322 (19%), Positives = 134/322 (41%), Gaps = 12/322 (3%)
Query: 117 SYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAF-EVKETESEIGDKVTV 175
D + + S+ D++V+ D EV + +I +++ E+ N + + + GDKVTV
Sbjct: 37 DVDTTKYVTLGSYKDIKVSVDTFEVTDTDIGKKIHEVQLQNSTYVKNDDRPISKGDKVTV 96
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADL-FSETTEILVGLKTGDQKEIERFFPEDHSIKD 234
T ++D + N +FI G+ + T+ L G+ G+ + P S K
Sbjct: 97 QMTGTIDGKENDGFKSDNFEFIYGNGEYVMDGFTDNLAGMYAGETTKFSITIPNTFSEKA 156
Query: 235 LAGKKVRLNFSIKEVFSPLPVVVNNDLAVR-LGFESESAMRGLCSQKIKQHSEFLVRQKV 293
GK+ IK V + +N++ + ++ + + IKQ +++
Sbjct: 157 FIGKEASFQVLIKSVEQLVMPEINDEFVQKISDSKTVAEYKEGLVPTIKQEKLEEIKKDK 216
Query: 294 KRQILDYISNKYTFD-VPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHM 352
K +S+ PE VEN+ + +K++ N + ++ + +
Sbjct: 217 KTGAWKIVSDASEISGYPEGAVENKSKELEEKLKIMAMVQNMELKDYLNT--YYGVTFEE 274
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP-GHEKKMLDHFQKYPNALAE 411
K + ++L IG NI ++E+E + +L + ++ + ++ L F +
Sbjct: 275 YVKLVLKQEMLLDAIGRAENITLSEKEYKESLTEYAKKYGYNNNEEFLKAFGE-----ET 329
Query: 412 LRAPIFEDKVIDHILKSVQIVD 433
++ + DKV I + + I +
Sbjct: 330 VKEALLWDKVQAFIAEQITIEE 351
>gi|222619669|gb|EEE55801.1| hypothetical protein OsJ_04389 [Oryza sativa Japonica Group]
Length = 398
Score = 63.9 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 11/127 (8%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKAN-IKGFRPGK------VPLSHI 54
+ + + V +P F+E + + A + GFR K +P S +
Sbjct: 253 KTSVVSRDDETINVRVDLPGKATQKVFDEALTSLARDAPPVPGFRKSKGGRTSNIPSSIL 312
Query: 55 KSLYGKS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLK 113
+ GKS + + EI+ V + + K + + P I +
Sbjct: 313 LQMLGKSRVTKFVLQEILSITVGDFVKKENLKV--NPEIK-TTQSEEELESSFTPGSSFS 369
Query: 114 LRLSYDI 120
+ +
Sbjct: 370 FSVVLQL 376
>gi|218291112|ref|ZP_03495127.1| trigger factor [Alicyclobacillus acidocaldarius LAA1]
gi|218238923|gb|EED06131.1| trigger factor [Alicyclobacillus acidocaldarius LAA1]
Length = 78
Score = 63.5 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG 59
M + + L+V + S R + +E + + + + GFR GKVP + +G
Sbjct: 1 MAAKWEKTGANVGVLEVEVDSERFAQALDEAFKRVVKRVVVPGFRKGKVPRKLFEKRFG 59
>gi|154483466|ref|ZP_02025914.1| hypothetical protein EUBVEN_01170 [Eubacterium ventriosum ATCC
27560]
gi|149735718|gb|EDM51604.1| hypothetical protein EUBVEN_01170 [Eubacterium ventriosum ATCC
27560]
Length = 404
Score = 63.5 bits (152), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/316 (12%), Positives = 94/316 (29%), Gaps = 17/316 (5%)
Query: 130 DDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQ 189
DD++VT D + I Q A A + ++ + Y
Sbjct: 76 DDVKVTDDSYKSQVDYILEQSATYKDTKSAKISSVDKVKVDYTGQIKYKGKKVTFEGGTA 135
Query: 190 SKKNVQFIVGSADLFSETTEILVG-LKTGDQKEIERFFPEDHSIKDL--------AGKKV 240
S + + S+ T+ L G K GD+ + FP+ + AGK V
Sbjct: 136 SDQEIDLGNNSSGYIDGFTKALEGQHKVGDKFTKKLKFPDTYKNNTKIDGKEVKLAGKTV 195
Query: 241 RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSE-FLVRQKVKRQILD 299
F+IK + + + + + ++ + KV +
Sbjct: 196 WFTFTIKSISTKSVPKLTDKFVKEKFGAYGVTDVKSFEKYAREQMRTSNIMNKVWSNFVA 255
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSS--ANQKSQNVDSIDEEDLQYYHMLAKRR 357
+ ++ + + + + E+ +
Sbjct: 256 SCEVVSYSSTEKESLKKVADANYESQLQSQYGVDLDSYLEAASMSKEDWDNNIMSQVESS 315
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ T +V + +K ++ ++ + + K++ + K E+ +
Sbjct: 316 LKTKMVYQALAKKADLVPSDSDYNKEAETLAQQNSLSVKELESTYGK-----KEVEYAVI 370
Query: 418 EDKVIDHILKSVQIVD 433
+V +I ++V + +
Sbjct: 371 TQRVQKYIAENVTVKE 386
>gi|195622152|gb|ACG32906.1| hypothetical protein [Zea mays]
Length = 235
Score = 63.1 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 11/138 (7%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKAN-IKGFRP---GK---VPLSHI 54
+ + K + V +P F+E + + A + GFR GK +P S +
Sbjct: 86 KTSVVSRDDEKINVRVQLPGKATQKVFDEALTFLARDAPPVPGFRKSKGGKTSNIPSSIL 145
Query: 55 KSLYGKS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLK 113
+ GKS + + EI+ + E + K + + +P I + E ++ S
Sbjct: 146 LQMLGKSRVTKFVLQEILSITIEEFVKKENLKV--KPEIQTTQSEGEMESA-FAPGSAFG 202
Query: 114 LRLSYDILPQIEISSFDD 131
+ + +
Sbjct: 203 FNVVLQLETPDSDDPEEK 220
>gi|160895079|ref|ZP_02075853.1| hypothetical protein CLOL250_02630 [Clostridium sp. L2-50]
gi|156863510|gb|EDO56941.1| hypothetical protein CLOL250_02630 [Clostridium sp. L2-50]
Length = 384
Score = 62.7 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/374 (13%), Positives = 122/374 (32%), Gaps = 22/374 (5%)
Query: 108 GTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES 167
Y +++ + T D+ + N +
Sbjct: 23 CGSTKSEFRQYAKCAEVKDYDGIEYVPTSREVTQDQIDEKINSFCTDNNVETKDYDSVIK 82
Query: 168 EIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFP 227
+ D ++ + ++G L E ++GLK G QK +P
Sbjct: 83 DGDDVNINYVETINGEEKAKNDDEAGTSIVMGKDALAPGLDEQMIGLKPGVQKTFTITYP 142
Query: 228 EDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRL---GFESESAMRGLCSQKIKQH 284
+D+S +AG + + + +I + +DL + + + ++++
Sbjct: 143 DDYSDTTVAGMEAKFDVTINYIKITTTPEYTDDLVKSATDGKYTTTEDYTKYLTDELQKD 202
Query: 285 SEFLVRQKVKRQILDYISNKYTF-DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI- 342
++ + +L I K TF PE ++ ++ + S Q
Sbjct: 203 TDKSADSTDRANVLKAIKEKTTFTKYPEGEIDAYVKSVMDNIESSASQYGIGVQTFLQYF 262
Query: 343 -----DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK 397
+ + Y + + IV+ +I + ++ ++E + + + E
Sbjct: 263 YGYTDEASFVSYLQSTVESVMQEKIVVSSIALEKDLVANDKETDAYKQKLMDDNEVDEDT 322
Query: 398 MLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ + +L+ E+KV+D+++ + VD + SSE + E ++
Sbjct: 323 INSKYSAS-----DLKFYATEEKVLDYLMGTAVQVDST-------EASSEDASEDGSTEA 370
Query: 458 SKVETFQSEEAPSE 471
E+ + +E
Sbjct: 371 ESTESTTETASEAE 384
>gi|163785570|ref|ZP_02180136.1| trigger factor [Hydrogenivirga sp. 128-5-R1-1]
gi|159879160|gb|EDP73098.1| trigger factor [Hydrogenivirga sp. 128-5-R1-1]
Length = 291
Score = 62.7 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 51/282 (18%), Positives = 122/282 (43%), Gaps = 7/282 (2%)
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ + + ++G+ L E + L G K GD+ +E + +++ K ++ +
Sbjct: 14 NSEEDEFEAVIGANQLRKEIEDELKGKKAGDKVHLENVPLYNEKGEEIG--KATVDIEVL 71
Query: 248 EVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYT 306
EV + N++ +G E+ + + +++ + +++++ILD ++ +Y
Sbjct: 72 EVEKKIVSEFNDEFVKEIGLGENVEEAKKKIREDLEKQVKEAKEAELEQKILDKLAEQYD 131
Query: 307 FDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGT 366
FDVP SLV+ E +L ++ + Q A + V V+
Sbjct: 132 FDVPVSLVKAEIEALLDNYIKQLQQFGIQPNEDMLR--AAAQGLEQTAVKNVRLMFVINK 189
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHIL 426
I EK IEV+EEE+ L ++ +++ F++ + +R + KV+D +
Sbjct: 190 IAEKEGIEVSEEEINKELEDIAQQYQTSVEEIRRIFEE-RGLIQNVRYVLLRKKVLDALK 248
Query: 427 KSVQIVD-RKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEE 467
++I++ K +++ + + ++ ++ S+ + E
Sbjct: 249 NKIKIIEMTKEEYEEKYGKLEDQLQQQPQEEKSESQEEVKNE 290
>gi|115441583|ref|NP_001045071.1| Os01g0894700 [Oryza sativa Japonica Group]
gi|57899810|dbj|BAD87555.1| unknown protein [Oryza sativa Japonica Group]
gi|113534602|dbj|BAF06985.1| Os01g0894700 [Oryza sativa Japonica Group]
gi|218189519|gb|EEC71946.1| hypothetical protein OsI_04765 [Oryza sativa Indica Group]
Length = 229
Score = 61.6 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 11/127 (8%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKAN-IKGFRPGK------VPLSHI 54
+ + + V +P F+E + + A + GFR K +P S +
Sbjct: 84 KTSVVSRDDETINVRVDLPGKATQKVFDEALTSLARDAPPVPGFRKSKGGRTSNIPSSIL 143
Query: 55 KSLYGKS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLK 113
+ GKS + + EI+ V + + K + + P I +
Sbjct: 144 LQMLGKSRVTKFVLQEILSITVGDFVKKENLKV--NPEIK-TTQSEEELESSFTPGSSFS 200
Query: 114 LRLSYDI 120
+ +
Sbjct: 201 FSVVLQL 207
>gi|62321585|dbj|BAD95133.1| hypothetical protein [Arabidopsis thaliana]
Length = 318
Score = 61.2 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 95/259 (36%), Gaps = 16/259 (6%)
Query: 183 NVILEDQSKKNVQFIVGSA-DLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
+ D K F L + ++G++ G+ K FPE + L G++ +
Sbjct: 61 GQAIPDAESKGFHFDTEEGNRLLPGFLDAIIGIRAGESKSFTLVFPESWKQESLRGQRAQ 120
Query: 242 LNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILD 299
KE+F +++ LA + G + + +++ ++ + Q IL+
Sbjct: 121 FTVDCKELFYRDLPTLDDSLADKLLPGCTTLKEVEETLAKRCQEMEQEAKEQATDNAILE 180
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV------DSIDEEDLQYYHML 353
I ++P+SL E + E+ + ++ E L+
Sbjct: 181 KIRKMVEVEIPQSLFEEQGRQFYGARLLEIQGNMKLKEDQLASLSSQKAVNEFLETQRES 240
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
+ I +G I ++ N+E + +E+ + + F H+++ + +
Sbjct: 241 ITNIIKQNIAVGDIFKRENLEFSTDELVKEVENSISEFKKHKQEF------DEERVKDQV 294
Query: 414 APIFED-KVIDHILKSVQI 431
I E KV++ + +I
Sbjct: 295 QEILEGAKVLEWLKDRAEI 313
>gi|21952841|dbj|BAC06256.1| P0696G06.13 [Oryza sativa Japonica Group]
Length = 356
Score = 61.2 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 11/115 (9%)
Query: 14 ELDVIIPSNRLTDSFNERIEDIRSKAN-IKGFRPGK------VPLSHIKSLYGKS-ILSE 65
++ V +P F+E + + A + GFR K +P S + + GKS +
Sbjct: 223 QVRVDLPGKATQKVFDEALTSLARDAPPVPGFRKSKGGRTSNIPSSILLQMLGKSRVTKF 282
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
+ EI+ V + + K + + P I + + +
Sbjct: 283 VLQEILSITVGDFVKKENLKV--NPEIK-TTQSEEELESSFTPGSSFSFSVVLQL 334
>gi|145579894|pdb|2NSB|A Chain A, Structures Of And Interactions Between Domains Of
Trigger Factor From Themotoga Maritima
gi|145579895|pdb|2NSC|A Chain A, Structures Of And Interactions Between Domains Of
Trigger Factor From Themotoga Maritima
Length = 109
Score = 61.2 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M+V E + + L+ + + + + ++ + + + I GFR G++P + +K G+
Sbjct: 1 MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPGFRKGRIPKNVLKMKLGE 60
Query: 61 SILSETIDEIIKEIVPEILSKRDE 84
T+D ++ +++P+ L R
Sbjct: 61 EFQEYTLDFLM-DLIPDTLKDRKL 83
>gi|225026330|ref|ZP_03715522.1| hypothetical protein EUBHAL_00572 [Eubacterium hallii DSM 3353]
gi|224956340|gb|EEG37549.1| hypothetical protein EUBHAL_00572 [Eubacterium hallii DSM 3353]
Length = 366
Score = 60.8 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 60/317 (18%), Positives = 129/317 (40%), Gaps = 13/317 (4%)
Query: 124 IEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES--EIGDKVTVDYTVSV 181
+++ + L + +V +++++ Q+ E+A +N ++E + + D + VDYT ++
Sbjct: 55 VKLGQYKGLTIKGASTKVTDQDVEDQVNELAHDNASYEEIKDRKTVQKDDYLNVDYTTTI 114
Query: 182 DNVILEDQSKKNVQFIVGSA----DLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ D S N+ +G D + E L+G K GD IE FPED+ +AG
Sbjct: 115 NGKENSDYSDSNLDMHLGDGNLNVDENVDVDEKLIGAKVGDTVTIEFTFPEDYDDSSIAG 174
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRL-GFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
KK L SI + + VN+ L ++ + + + Q +
Sbjct: 175 KKCELAVSINMIEKEVIPEVNDALVKENTDCKTVKEYKKQVRDSLVSDKKSEAEQTNQET 234
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ + I + T S + + K+ + + D I++ AK
Sbjct: 235 LWNKIMDNATQLKDFSEADIKKEVSNIKIENKEMAGYFGMSVSDFIEQYYEMSLEDYAKE 294
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP-GHEKKMLDHFQKYPNALAELRAP 415
+ V + ++N+IE+T+ ++ + + +K++L + E+ +
Sbjct: 295 NLKKQCVQDLLLKENSIEITDADVDEEIQYYIDELGYKDKKEVLSAISED-----EIHSE 349
Query: 416 IFEDKVIDHILKSVQIV 432
+ K++D ++K I
Sbjct: 350 LQYTKLMDALMKETTIK 366
>gi|238922260|ref|YP_002935774.1| trigger factor [Eubacterium eligens ATCC 27750]
gi|238873932|gb|ACR73640.1| trigger factor [Eubacterium eligens ATCC 27750]
Length = 345
Score = 60.4 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 43/333 (12%), Positives = 123/333 (36%), Gaps = 12/333 (3%)
Query: 108 GTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES 167
+ ++ Y++ +++ ++++ V D ++ + I+ ++ + ++N + + +
Sbjct: 19 CNSKIDVKYDYNVEDYVQLGQYENISVQVDKTSIENELIESKIKQDVEDNTTYTEVDRGA 78
Query: 168 EIGDKVTVDYTVSVDNVILEDQS---KKNVQF-IVGSADLFSETTEILVGLKTGDQKEIE 223
D++ V YT + L + K + E + L G+ G K +
Sbjct: 79 IASDQILVTYTATSSGASLSGLTNTDGKTMILGTDTLGLELDELDQALYGMTPGQTKILI 138
Query: 224 RFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLG-FESESAMRGLCSQKIK 282
PED+S G +V +++ V ++ N +++ R + ++
Sbjct: 139 VDIPEDYSSDLYKGTRVVFELTMQTVAQANVPMITNAYVKEAFGYDTVEEYRQSIKESLE 198
Query: 283 QHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI 342
V K++ +L + + + + E L+ + + S++
Sbjct: 199 TDINSKVENKIQEDVLSSLQDTFKISSYPDSLMEETRSRLETSIGFYADFSNLSKDEYCQ 258
Query: 343 DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP-GHEKKMLDH 401
+ L + K+ V+ +++ I + N+ + E + + +L + ++
Sbjct: 259 KQYGLSFDDF-VKKSVVQQLIMEAIVKDRNMTMREYDYKGSLDDFAADNGYSNADTFVEK 317
Query: 402 FQKYPNALAELRAPIFEDKVIDHILKSVQIVDR 434
F K + + K D++++ I +
Sbjct: 318 FGKDK-----IVKAMLVQKAQDYVIEHANISYK 345
>gi|95928859|ref|ZP_01311605.1| trigger factor-like [Desulfuromonas acetoxidans DSM 684]
gi|95135204|gb|EAT16857.1| trigger factor-like [Desulfuromonas acetoxidans DSM 684]
Length = 350
Score = 60.0 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 68/184 (36%), Gaps = 5/184 (2%)
Query: 255 VVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLV 314
+ L L F+S + ++ +K ++ + + + V
Sbjct: 152 ADDDEKLLASLPFDSIEEFAAEIHTSLVSLAQEKSELNIKEAVVSKLIETNPCPLKDEAV 211
Query: 315 ENEYNGILQKVRFEMSSA--NQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNN 372
+ + + + R ++ S + ++ E+ + A+ V ++L + +
Sbjct: 212 DQQVALQIHQFRQKVGSKRFEEYLKSTHRTIEDVKKEVRPEAEVTVRRNLLLAAVAQTQA 271
Query: 373 IEVTEEEMQSALYQQ---LGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSV 429
+EVTEE+++ + QQ + + L ++ P A +L I K D+I+
Sbjct: 272 LEVTEEDIKQTILQQENSIMDMALDFETRLKRMEETPGAKEQLIHSIRLKKATDYIVDKA 331
Query: 430 QIVD 433
+ +
Sbjct: 332 ILTE 335
Score = 43.1 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 70/204 (34%), Gaps = 24/204 (11%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVP-------LSH 53
M V S + + I ++ + ++ + + N K P +
Sbjct: 1 MTVTMLQSSEEEALFKIEIDADTIENAITKEFVMVTEGEN-------KEPQGLPLSNRAM 53
Query: 54 IKSLYG-KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL 112
+ + I ++ ++ I+ L + D P I E +
Sbjct: 54 MANHKELDRIAAQALNNILPSYYMGALKELDITPMSYPKIMPQET---------KLGEPC 104
Query: 113 KLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDK 172
+++ + P+I + ++ L+V+ V E ++++QM + + A + E
Sbjct: 105 VVKIQVALEPKITLEEYEGLEVSYVPVVVTEDDVNQQMQGLRQQRGAADDDEKLLASLPF 164
Query: 173 VTVDYTVSVDNVILEDQSKKNVQF 196
+++ + + L +++ +
Sbjct: 165 DSIEEFAAEIHTSLVSLAQEKSEL 188
>gi|154482656|ref|ZP_02025104.1| hypothetical protein EUBVEN_00329 [Eubacterium ventriosum ATCC
27560]
gi|149736432|gb|EDM52318.1| hypothetical protein EUBVEN_00329 [Eubacterium ventriosum ATCC
27560]
Length = 412
Score = 59.3 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/336 (14%), Positives = 121/336 (36%), Gaps = 15/336 (4%)
Query: 104 GLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVK 163
+E +L ++Y + ++ + + + E D ++ +
Sbjct: 78 KKVEPEKELLKEMNYGV-SSMKDYFSNYISLGNYKGLTYEITQDMWDESVSDETNEYNTA 136
Query: 164 ETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADL--FSETTEILVGLKTGDQKE 221
+ +E D+V + T VD+ + + K+ + I+G ++ L G K+G++
Sbjct: 137 KKVAEDTDQVEYNLTGYVDDKKDSNITHKDQEVIIGENSKGALKIISDALKGHKSGEEIT 196
Query: 222 IERFFPEDHSIK--DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESES-AMRGLCS 278
IE D + D +GK V+ IK V V + ++
Sbjct: 197 IEGLNASDFATDGSDYSGKNVKFVAKIKSVRKLYVEKVTDKWVKENYYDDYGLENADDFY 256
Query: 279 QKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN 338
+ KQ + ++ ++L+ + V E +G +
Sbjct: 257 KWCKQSLIEDAKAELWSKVLESSVVNKYSETAYQRVIEEVDGDYNYNAEFFGMTTDEYLE 316
Query: 339 VDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNI--EVTEEEMQSALYQQLGRFPGHEK 396
++ + E+D++ +M A + + +V+ I EK + ++T+E++Q+ + +
Sbjct: 317 INGMTEDDMEDEYMNA---LKSEMVMWAIVEKEGLANKITDEDIQNKWDELYQEGDFESE 373
Query: 397 KMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
+ + +R DK +D + ++
Sbjct: 374 EDMKSQYTDEE----IRQGALMDKAVDWVYDHAKVK 405
>gi|153815941|ref|ZP_01968609.1| hypothetical protein RUMTOR_02186 [Ruminococcus torques ATCC 27756]
gi|145846760|gb|EDK23678.1| hypothetical protein RUMTOR_02186 [Ruminococcus torques ATCC 27756]
Length = 340
Score = 58.9 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 102/268 (38%), Gaps = 15/268 (5%)
Query: 135 TQDICEVDEKEIDRQMAEIAKNNVAFEV-KETESEIGDKVTVDYTVSVDNVILEDQSKKN 193
+ EV ++++++ + E K+ +E GD V +DYT +D+V E +
Sbjct: 43 QVEKVEVTDEQVEQSVQANLNAAAEKEPIKDRAAEKGDWVNIDYTGYIDDVAFEGGTATG 102
Query: 194 VQFIVGSADLFS------ETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+GS + ++G TG++ +IE F + + D+AGK R + +
Sbjct: 103 SDLELGSGSFIGAEGGYAGFEDQIIGHSTGEEFDIEVKFSDSYPGTDVAGKVARFHIVLN 162
Query: 248 EVFSPLPVVVNNDLAVRL--GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
E++ + ++ ++ R ++I+ +E +K +I + + +
Sbjct: 163 EIYKQNIPELTDEWVASNSKTAKTADEYRKEVRKQIESSAETANETTLKSEIQEALLEEI 222
Query: 306 T-FDVPESLVENEYNGILQKVRFEMSSANQKSQN-----VDSIDEEDLQYYHMLAKRRVL 359
P+ VE + + + + ++E A++
Sbjct: 223 DVKKYPKDAVEEQKKQMTDYYTQMAGLYGIELSEFITTYLQMTEDEFNSKVKESAQQTAA 282
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQ 387
+ I EK +E +E+E + + +
Sbjct: 283 FDEAIKLIAEKQKLEPSEKEYKRKIQRI 310
>gi|1834392|emb|CAA70821.1| trigger factor [Bacillus subtilis]
Length = 192
Score = 58.9 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 224 RFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKI 281
FPE++ +DLAGK I E+ + ++++ A E+ + + +++
Sbjct: 1 VTFPEEYHAEDLAGKPAVFKVKIHEIKAKELPELDDEFAKDIDEEVETLAELTEKTKKRL 60
Query: 282 KQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS 341
++ E K++ +++ S DVP+++V+ E + +L++ + +
Sbjct: 61 EEAKENEADAKLREELVLKASENAEIDVPQAMVDTELDRMLKEFEQRLQMQGMNLELYTQ 120
Query: 342 I----DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK 397
+ + A++RV + + L I + N+EV++EE+ + L + + +
Sbjct: 121 FSGQDEAALKEQMKEDAEKRVKSNLTLEAIAKAENLEVSDEEVDAELTKMAEAYNMPVEN 180
Query: 398 MLDHFQK 404
+
Sbjct: 181 IKQAIGS 187
>gi|108761808|ref|YP_629964.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Myxococcus xanthus DK 1622]
gi|108465688|gb|ABF90873.1| peptidyl-prolyl cis-trans isomerase, FKBP-type domain protein
[Myxococcus xanthus DK 1622]
Length = 364
Score = 58.5 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/275 (12%), Positives = 88/275 (32%), Gaps = 5/275 (1%)
Query: 162 VKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKE 221
+ GD V +D + ++ ++ + L E +V + G+
Sbjct: 87 EPGEAVDSGDDVLLDVVGFANGRLIPFSARAEWRTEATPDPLLPGFFEAVVRARVGESVA 146
Query: 222 IERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLP--VVVNNDLAVRLGFESESAMRGLCSQ 279
++ P+D++++ L G R + +K + A + + +
Sbjct: 147 VDLVLPDDYAVESLRGVPARFDVKMKAAYQVTLLGESSPELFAALGRGGTLDEVMEYIAG 206
Query: 280 KIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFE-MSSANQKSQN 338
++ + + ++ ++ + +VP SL++ E + + + S +
Sbjct: 207 ELIAQRDAQYLWDFQDHVMREVARRTHVEVPRSLIDEEIRQRWAEAEYPILVSLGLPHER 266
Query: 339 VDSIDEED--LQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEK 396
V + + R+ + L I E+++I+ E + R
Sbjct: 267 VREGLDGWLLDDSTRSELEYRLRLALGLRAIAERDHIQSERESAEELFNSLAERAQLSRV 326
Query: 397 KMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQI 431
++ Q N V+ HIL +
Sbjct: 327 ELGRLLQSDKNLGRRFDTLTMHTAVVSHILSKADV 361
>gi|225569847|ref|ZP_03778872.1| hypothetical protein CLOHYLEM_05941 [Clostridium hylemonae DSM
15053]
gi|225161317|gb|EEG73936.1| hypothetical protein CLOHYLEM_05941 [Clostridium hylemonae DSM
15053]
Length = 349
Score = 58.5 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 107/273 (39%), Gaps = 11/273 (4%)
Query: 164 ETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIE 223
+ + GD V +DY S D +++ S + + VGS + + L+G GD IE
Sbjct: 74 DRAIQEGDVVIIDYAASADGQPIQNGSGSDYELTVGSGSFYEGFDDNLIGHNAGDTLNIE 133
Query: 224 RFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLA--VRLGFESESAMRGLCSQKI 281
F +D + K LAGKK ++ ++K V + ++ + ++ R + +
Sbjct: 134 HTFADDFNNKTLAGKKASIDVTVKAVREKELPELTDEFVRTISQKSDTVEEYRKEVRKLL 193
Query: 282 KQHSEFLVRQKVKRQILDYISNK-----YTFDVPESLVENEYNGILQKVRFEMSSANQKS 336
+++++ ++ ++ + Y D + ++ Y+ +
Sbjct: 194 EENNKEYIQSELMDSAWKQVLENTEVKKYPKDRLKEEEQSFYDHYEDGADMYEMDFPEFL 253
Query: 337 QNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEK 396
+D + E + A+ V + + I +K +I++ ++ + A + +
Sbjct: 254 SKIDMTEAEFKEKAEEAARSNVKEDLTVELIADKEHIKLDDKAYKKAKKELAEEMG--YE 311
Query: 397 KMLDHFQKYPNALAELRAPIFEDKVIDHILKSV 429
+ ++ P +R I +KV + + +
Sbjct: 312 DVKAMEKEAPE--ESVRRYILREKVKEWVADNC 342
>gi|145642384|ref|ZP_01797944.1| trigger factor [Haemophilus influenzae R3021]
gi|145272927|gb|EDK12813.1| trigger factor [Haemophilus influenzae 22.4-21]
Length = 63
Score = 57.3 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 31/63 (49%)
Query: 384 LYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ + ++++++ K + +R + E++ +D +L Q+ ++ +FD++ +
Sbjct: 1 MIADIASAYEQPAEVVEYYSKNKELMNNIRNVVLEEQAVDAVLAKAQVTEKVSSFDEIMN 60
Query: 444 NSS 446
+
Sbjct: 61 PQA 63
>gi|329576868|gb|EGG58353.1| hypothetical protein HMPREF9520_01327 [Enterococcus faecalis
TX1467]
Length = 61
Score = 55.8 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 16/49 (32%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKV 49
M + L I + + ++ N+ GFR GKV
Sbjct: 8 MSAKWEKKGTNDGVLTFSIEQAVIEKGLTQAFNKVKKNLNVPGFRKGKV 56
>gi|312621115|ref|YP_003993843.1| cell division trigger factor [Photobacterium damselae subsp.
damselae]
gi|311872836|emb|CBX86927.1| Cell division trigger factor [Photobacterium damselae subsp.
damselae]
Length = 403
Score = 55.4 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 43/100 (43%)
Query: 156 NNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLK 215
+ T + +V +D+ +D+V E ++ +G + + L+G K
Sbjct: 303 QPTTWLESNTPVQSDSRVVIDFEGFIDSVPFEGGKAESFVLQMGQGRMIPGFEDGLIGRK 362
Query: 216 TGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPV 255
GD ++ FP D+ ++L GK + +I ++ + +
Sbjct: 363 VGDSFDVHLSFPSDYHAENLKGKSTVFHITIHKIENKVLA 402
>gi|313619227|gb|EFR90987.1| trigger factor [Listeria innocua FSL S4-378]
Length = 174
Score = 55.4 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 70/171 (40%), Gaps = 8/171 (4%)
Query: 263 VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGIL 322
+ E+ ++ S+++++ E V Q + +++ D+P ++V +E + ++
Sbjct: 5 IDEEVETLDELKEKISKRLQEAKEDSVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLM 64
Query: 323 QKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEE 378
++ + Q +E A++RV +VL I E NIE TEE
Sbjct: 65 NHFAQDLQAQGLTPELYYQFTGQTEEAMHAQMEKDAEKRVKMNLVLEAIAEAENIEPTEE 124
Query: 379 EMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSV 429
+ + ++ + + ++EL++ + K ID +L S
Sbjct: 125 AIDEEISTLAEKYGMEKDAVRAAL----GDMSELKSDLKIRKAIDVLLDSA 171
>gi|313633467|gb|EFS00291.1| trigger factor [Listeria seeligeri FSL N1-067]
Length = 156
Score = 54.6 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 64/157 (40%), Gaps = 8/157 (5%)
Query: 277 CSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ-- 334
S ++++ + V Q + +++ D+P ++V +E + ++ ++ +
Sbjct: 1 ISNRLQEAKKDSVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTP 60
Query: 335 --KSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP 392
Q +E A++RV +VL I E NIE TEE + + ++
Sbjct: 61 ELYYQFTGQTEEAMHAQMEQDAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYG 120
Query: 393 GHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSV 429
+ + ++EL++ + K ID +L S
Sbjct: 121 MEKDAVRAAL----GDMSELKSDLKIRKAIDVLLDSA 153
>gi|227486246|ref|ZP_03916562.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
gi|227235657|gb|EEI85672.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC
51172]
Length = 201
Score = 54.6 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 60/169 (35%), Gaps = 4/169 (2%)
Query: 266 GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKV 325
+++ ++ +K+ + + + + Q + + K P S+V E + +Q +
Sbjct: 4 EYDTLDELKNSLKEKLAEDKKAYAQNARENQAVAALVEKSEVTAPASMVNKEIDYEMQNL 63
Query: 326 RFEMSSAN----QKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQ 381
+ Q + + Y A RV +V+ + K NIEVT+EE +
Sbjct: 64 DQRLQGMGLSLSQYIELTKMDMAQIRGQYKEQASARVKANLVIDEVVLKENIEVTDEEKE 123
Query: 382 SALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ 430
L + + + + + L I K ++ + +
Sbjct: 124 KELQETAKNYGVEDLEKFKEIFAKNVSDDTLVENIKRRKAVELLASKAK 172
>gi|195995537|ref|XP_002107637.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens]
gi|190588413|gb|EDV28435.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens]
Length = 7662
Score = 54.6 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 55/519 (10%), Positives = 153/519 (29%), Gaps = 69/519 (13%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFN---------------ERIEDIRSKANIKGFR 45
M++IE +E +K++ + + + + ++ I +
Sbjct: 6867 MELIEAKNESIKKQKECELTAEAVKKQTELSTRAMIELNNVETATAVKKITA-VKPD--- 6922
Query: 46 PGKVPLSHIK-------SLYGKSI------LSE--TIDEIIKEIVPEILSKRDERAAMRP 90
I+ I E I+ +E + L + E A +
Sbjct: 6923 -----KKVIEIEAELKEKHLEDQIKLRLEHREEMAEIERQAQEEQNKALEEIVEGMAAKL 6977
Query: 91 SITINEGESDITSGLIE-GTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQ 149
E + + + + L + ++++ + +++ K +R+
Sbjct: 6978 EEEDVEFQKKAAEAKEKLSAEEFQKMLDDHEKELESMQQNQEIEIAKHRDQLNSKLEERR 7037
Query: 150 MAEIAKNNVAFEVKETESEIGDKVTVDY-------TVSVDNVILEDQSKKNVQFIVGSAD 202
+ + E++ + + + D + + KN S
Sbjct: 7038 RRKQQQLARKQEIEMQKKLLQQQAEADRLNAEREAKKEDAALAETIKELKNSDNENESKR 7097
Query: 203 LFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLA 262
+ ++ + + E ++ + + + +
Sbjct: 7098 AENLIYHVMQQRHAKETLQHEEQLKKELATALAEAQNNVATKCQDNRDKLVEQHEHQLAE 7157
Query: 263 VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGIL 322
+ + S + Q+ + + L + E+ + +N +
Sbjct: 7158 LLAHSDGISPLELKSRQRALEGKQQTQ--------LAEFDKDAATKMQEAAKDVMFNLQI 7209
Query: 323 QKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQS 382
Q ++ ++ + S +E ++A+ T T + E +EM++
Sbjct: 7210 QHANARLALKTKQLAELSSSMQELAGQRELIAEYTDRTNEATRTAQQDR--EKIMKEMEA 7267
Query: 383 ALYQQ-LGRFPGHEKKMLDHFQKYPNALAELR------APIFEDKVIDHILKSVQI-VDR 434
L + + EK+ + Q+ EL+ E++ I + ++ ++
Sbjct: 7268 KLEKIKAEKRKAQEKQRAELAQQLEALQDELQLEQSKDEQYLEEQ----IAEREKVHEEQ 7323
Query: 435 KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
+ D+L + E +K +E Q + A EI+
Sbjct: 7324 RKKKDELMKSKIEKEDLNEDEKQKLIEQHQRDLAELEIA 7362
>gi|77409775|ref|ZP_00786428.1| trigger factor [Streptococcus agalactiae COH1]
gi|77171615|gb|EAO74831.1| trigger factor [Streptococcus agalactiae COH1]
Length = 195
Score = 54.6 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 12/199 (6%)
Query: 241 RLNFSIKEVFSPLPVVVNNDLAV--RLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQIL 298
+ +I + + ++++LA E+ ++ ++++ E V+ +
Sbjct: 2 KFVTTIHILKTKEVPALDDELAKDIXXEVETLDELKAKYRKELESAKEIAFDDAVEGVAI 61
Query: 299 D-YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----IDEEDLQYYHML 353
+ ++N ++PE +V +E + + + M + +E+ + Y
Sbjct: 62 ELAVANAEIVELPEEMVHDEVHRAMNEFMGNMQRQGISPEMYFQLTGTTEEDLHKQYQAD 121
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
A +RV T +V+ I E T+EE++ + + ++ L+
Sbjct: 122 ADKRVKTNLVIEAIAAAEGFEATDEEIEKEITDLASEYNMEADQVRGLLSAD-----MLK 176
Query: 414 APIFEDKVIDHILKSVQIV 432
I K +D I S +
Sbjct: 177 HDIAMKKAVDVITSSATVK 195
>gi|319937190|ref|ZP_08011597.1| hypothetical protein HMPREF9488_02432 [Coprobacillus sp. 29_1]
gi|319807556|gb|EFW04149.1| hypothetical protein HMPREF9488_02432 [Coprobacillus sp. 29_1]
Length = 210
Score = 54.2 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 123 QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETE-SEIGDKVTVDYTVSV 181
+ + S ++VT + ++ + ++ + S+ D V +DY +
Sbjct: 78 DMAVDSSKSIKVTFPANYGSSELAGKETTFDIDLHAIYQPADDAASQNSDIVKIDYVGKL 137
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
+ + + +GS E LVG+KTG+ K I+ FP ++ +LAGK+V
Sbjct: 138 NGTAFQGGTANGALLELGSGTYIEGFEEQLVGMKTGESKTIKVTFPANYGSSELAGKEVT 197
Query: 242 LNFSIKEVF 250
+ +I +F
Sbjct: 198 FDVAINHIF 206
>gi|6683548|dbj|BAA89241.1| SA2F01-1 [Lactococcus garvieae]
Length = 201
Score = 53.9 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 80/204 (39%), Gaps = 12/204 (5%)
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVR--- 290
AGK+ + EV + ++++LA E+ ++ ++++
Sbjct: 3 AGKEAVFATKVNEVKAKEVPALDDELAKDIDEEVETLDELKAKFRKELEDAKAEAYNDAV 62
Query: 291 --QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
++ + + + ++ V N L ++ + S Q + +E+ +
Sbjct: 63 ETAAIETAVANAEIKEIPEEMFHEEVHRAMNDFLGGMQQQGISPEMYFQITGTTEEQLHE 122
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
Y A +RV T +V+ I + N E T+EE+++ + ++ +++
Sbjct: 123 QYQEDAGKRVRTNLVIEAIAKAENFETTDEEVKAEIADLAAQYNMPVEQVEKLLP----- 177
Query: 409 LAELRAPIFEDKVIDHILKSVQIV 432
+ L+ I K ++ I SV++
Sbjct: 178 VDMLQHDIAMKKAVEAITDSVKVK 201
>gi|7710208|gb|AAF67814.1| putative trigger factor [Desulfitobacterium dehalogenans ATCC
51507]
Length = 311
Score = 53.9 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 51/305 (16%), Positives = 119/305 (39%), Gaps = 12/305 (3%)
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILED 188
+ +L++ ++ + K + K +EIGD+V ++ D + + +
Sbjct: 9 YKELKLKPLPEFTEDDLNRAVIESTLKLLNEWSKKNKLAEIGDEVIINLNPVCDGIFVPE 68
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKE 248
+K N ++ VG + + + ++ K GD +++ FPE ++ ++GK V + + E
Sbjct: 69 LAKSNFKYTVGDPSMLEQF-KNVIHCKAGDSFKMDILFPESAPLERISGKTVTFDADVLE 127
Query: 249 VFSPL---PVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
V + + S ++ I + ++ + I + I
Sbjct: 128 VINHSQQLESSDEIARLIDPAVSSMEELKNNLRGIIADNWSQVIAESKLEMIFEEILAYS 187
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSAN---QKSQNVDSIDEEDLQYYHMLAKRRVLTGI 362
++ E + Y IL K R + S+ + DE + +L ++ +L +
Sbjct: 188 EYEFDEEEFKKVYEDILVKTRQSIISSENLSMMPSLLSEDDEYFYEDCKILTEKTILRKL 247
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVI 422
+L I I VT++E+Q + L ++++P+ + + E+K
Sbjct: 248 ILDEIAHLETIGVTDDEIQEEKKRLLNLAADQTA----FYKQFPDE-ESIGNNLVEEKXA 302
Query: 423 DHILK 427
+L+
Sbjct: 303 KLLLE 307
>gi|163804166|ref|ZP_02197930.1| trigger factor [Vibrio sp. AND4]
gi|159172014|gb|EDP56994.1| trigger factor [Vibrio sp. AND4]
Length = 39
Score = 53.1 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSK 38
MQV + EGL+R L++ +P+ + D+ + +I
Sbjct: 1 MQVTVETLEGLERRLNITVPAANIEDAVTAELRNIAKN 38
>gi|313623988|gb|EFR94086.1| trigger factor [Listeria innocua FSL J1-023]
Length = 154
Score = 53.1 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 64/155 (41%), Gaps = 8/155 (5%)
Query: 279 QKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQ---- 334
+++++ E V Q + +++ D+P ++V +E + ++ ++ +
Sbjct: 1 KRLQEAKEDSVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPEL 60
Query: 335 KSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGH 394
Q +E A++RV +VL I E NIE TEE + + ++
Sbjct: 61 YYQFTGQREEAMHAQMEKDAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGME 120
Query: 395 EKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSV 429
+ + ++EL++ + K ID +L S
Sbjct: 121 KDAVRAAL----GDMSELKSDLKIRKAIDVLLDSA 151
>gi|126653682|ref|ZP_01725601.1| trigger factor [Bacillus sp. B14905]
gi|126589719|gb|EAZ83854.1| trigger factor [Bacillus sp. B14905]
Length = 106
Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Query: 324 KVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSA 383
+++ + + + Q +E+ A+ RV + L I E IE TE ++++
Sbjct: 1 RLQTQGMNLDLYYQFSGQSEEDLRGQMKEEAESRVRVSLTLEAIAEAEKIEATEADIEAE 60
Query: 384 LYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVD 433
L + +F ++++ A L I K ++ ++++ +I +
Sbjct: 61 LEKMAAQFNMTKEQITGAL----GGTAVLENDIKIQKTVEFLVENAKITE 106
>gi|332099001|gb|EGJ03946.1| trigger factor domain protein [Shigella dysenteriae 155-74]
Length = 66
Score = 52.3 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 32/65 (49%)
Query: 382 SALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQL 441
L +++ K +++ + K + +R E++ ++ +L ++ +++ TF++L
Sbjct: 2 KGLIEEMASAYEDPKVVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNEL 61
Query: 442 FDNSS 446
+ +
Sbjct: 62 MNQQA 66
>gi|253580897|ref|ZP_04858159.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847739|gb|EES75707.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 290
Score = 51.9 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/277 (13%), Positives = 111/277 (40%), Gaps = 12/277 (4%)
Query: 203 LFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLA 262
+F E ++G+K GD KEI+ FP D++ + LAGK+V +++ V + +A
Sbjct: 1 MFEEFENGVIGMKKGDTKEIKIDFPSDYADETLAGKEVIYKVTVQNVRREGELTD-EWVA 59
Query: 263 VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYT-FDVPESLVENEYNGI 321
+ + R +++++++ ++ +K + + P+ V+ +
Sbjct: 60 KNTDYTTVDDYRESIRSELEKNAKESAQEVLKNTAWSTVLENSEVKEYPQEDVDKAVSEF 119
Query: 322 LQKVRFEMSSANQKSQNVDS----IDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTE 377
+ + A+ + ++ + A+ +V +++ I + + + +
Sbjct: 120 KKSMEVYAKQADMTLEEFTDSQGISQDDFDEQCQQYAEGKVKQNLIVQGIMDAEGLSLDD 179
Query: 378 EEMQSALYQQLGRFPGHE-KKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKV 436
+E + + + +++ + + + + +V + I+K+ + ++
Sbjct: 180 KESLQLQDKLVEQMGVSSIAELVGTYGQD-----YVDESVGLLRVEEFIIKNASVSEKVA 234
Query: 437 TFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
D L D++ ++ D V ++++ + S
Sbjct: 235 NGDVLADDADAAAENAEQDSDQNVSDEDTDDSGQDNS 271
>gi|254226472|ref|ZP_04920057.1| trigger factor [Vibrio cholerae V51]
gi|125620978|gb|EAZ49327.1| trigger factor [Vibrio cholerae V51]
Length = 165
Score = 51.5 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Query: 224 RFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES--ESAMRGLCSQKI 281
FPED+ ++L GK + + +V + +N++ R G A++ + +
Sbjct: 1 MTFPEDYHAENLKGKAAKFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNM 60
Query: 282 KQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS 341
++ + ++ ++K Q ++ + + VP +L++ E N + Q+ NV++
Sbjct: 61 ERELKQAIKARIKEQAIEGLVKENEIQVPSALIDQEINVLRQQAAQRFGG------NVEA 114
Query: 342 IDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF 391
+ + + AKRRV+ G++LG + + ++ EE++++ + + +
Sbjct: 115 AAQLPRELFEEQAKRRVVVGLLLGEVIRTHELKADEEKVKALITEMATAY 164
>gi|160880344|ref|YP_001559312.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)-like
protein [Clostridium phytofermentans ISDg]
gi|160429010|gb|ABX42573.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)-like
protein [Clostridium phytofermentans ISDg]
Length = 345
Score = 51.5 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 57/328 (17%), Positives = 129/328 (39%), Gaps = 23/328 (7%)
Query: 112 LKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD 171
+ ++ + I++ +DDL+ + V +EI+ ++ I + + + I
Sbjct: 35 MLEAVNVKVDALIKLGDYDDLEYRLNPVNVTNEEINEYISNILNSYEEIHEIKDRAIIQY 94
Query: 172 KVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
T+ + + S+ QF++G+ ++ E E L+ T + + P + S
Sbjct: 95 HDTIRLNYDIYYNNKQTYSQLGKQFMIGNYEVDKEFEEHLINQPTNQEIIFDMTVPLE-S 153
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAV-RLGFESESAMRGLCSQKIKQHSEFLVR 290
LAGK V ++ ++ + V ++L +LG ES S+ ++ + E
Sbjct: 154 EDALAGKNVTVHATVTNIMGFSVVDFTDELVKNKLGHESIEEYTAYVSELLRSNREKKDI 213
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS-----IDEE 345
K Q+LD + ++ F + E + GI++ + N + +E
Sbjct: 214 NDTKDQLLDTVISRSKFRIDEKSILKNAVGIVKTYQNMAYIYNLTLEEYIESIMKITKDE 273
Query: 346 DLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ + ++ ++ + I K I ++++E++ + + + KML FQ
Sbjct: 274 FYERCYNESEMQIKKYLACVGIANKERILISDKEVEEEIDK----NDNQDSKMLAIFQ-- 327
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVD 433
I EDK+ + + V+
Sbjct: 328 ----------IEEDKIKQILFDKAKCVE 345
>gi|307184798|gb|EFN71112.1| Cadherin-23 [Camponotus floridanus]
Length = 4786
Score = 51.5 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/405 (9%), Positives = 119/405 (29%), Gaps = 28/405 (6%)
Query: 63 LSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILP 122
+ ++ + EI E+L K + D + + +
Sbjct: 3775 HEKEAEKSLHEIEREMLEKEKITV--ENDTNELKMLEDTEKATKKEDTSEQYIKDAKVSS 3832
Query: 123 QIEISSFDDLQ-VTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSV 181
+ + ++ +D D +M + K+ + E + + D +
Sbjct: 3833 DVIEHHVEQIEEYKKDELYSDTIAPLSKMEKDLKDIKDVTHPKEEEKTVCEHENDQKEEL 3892
Query: 182 DNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVR 241
+ +++QS++ + ++D + +++ + G E E I K
Sbjct: 3893 SHEPIKEQSEEKMPLAEITSDTEQKMKKLIP-KENGKDSSHEIKSDEKMKII----KSDT 3947
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
+ S + + + S + +
Sbjct: 3948 EEYQSVVEKSEEIPQEHTTQDSERIGKDIEPTETFEKSFDVKQSSQYDSVNLTDIPCAFS 4007
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ T + E + +++ E S + + + + + +
Sbjct: 4008 IDDKTLKYIDESTSQEDDLKIKRQEIEKESHGLSQEISTLQEIKLKKTIEDESPTSL--- 4064
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ ++EE+ + Q+ G EK L+ +++ ++ ++ E+
Sbjct: 4065 ---------TKLTTSKEEITAEEQLQIESAKGKEKSFLEQYEEKAEEISAVKERPDEE-- 4113
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
I +++D++++ DQL ++ + +E
Sbjct: 4114 ---IK---KVLDKELSTDQLPKDTDLEKSTASKSEKLDKSATATE 4152
>gi|159162627|pdb|1L1P|A Chain A, Solution Structure Of The Ppiase Domain From E. Coli
Trigger Factor
Length = 106
Score = 51.2 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 47/104 (45%)
Query: 155 KNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGL 214
++ K+ E D+VT+D+T SVD E + +G + + + G
Sbjct: 3 HMQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGH 62
Query: 215 KTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVN 258
K G++ I+ FPE++ ++L GK + ++K+V +
Sbjct: 63 KAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELT 106
>gi|169841621|ref|ZP_02874734.1| hypothetical protein cdivTM_31000 [candidate division TM7
single-cell isolate TM7a]
Length = 69
Score = 51.2 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 14 ELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKE 73
E+ + L + + A + GFRPG VP I+S + K I E ++ II +
Sbjct: 3 EVSAVREGEELKHLKDHVLVHF-KDAKVDGFRPGHVPAKVIESKFKKEIEGEILNHIISD 61
Query: 74 IVPEILSK 81
+ L K
Sbjct: 62 EYRKQLQK 69
>gi|261883799|ref|ZP_06007838.1| trigger factor [Campylobacter fetus subsp. venerealis str. Azul-94]
Length = 144
Score = 50.8 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK-SQNVDSIDEEDLQYYH 351
+K + D K+ F +P ++VE E + + S K + ++ + Y
Sbjct: 1 MKPKFADKAVEKFKFVLPNNIVEQEIDMQFRSAWGNFSEDEMKKFREDKEALKKQRETYK 60
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A + V ++ + ++ I V++ E+ A+Y + R+ K+ L+ ++K L
Sbjct: 61 NEAIKSVQLTFIIDELAKQKGITVSDNELLQAVYFEAYRYGIDPKEHLESYKK-QGMLPA 119
Query: 412 LRAPIFEDKVIDHILKSVQIVDR 434
++ + E+K+ +++ KS D+
Sbjct: 120 VKMAMIEEKLFNNLFKSGNREDK 142
>gi|296209973|ref|XP_002751793.1| PREDICTED: laminin subunit beta-1 [Callithrix jacchus]
Length = 1788
Score = 50.4 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/409 (9%), Positives = 133/409 (32%), Gaps = 26/409 (6%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLK-LRLSYDILPQIEISSFDD 131
+ V + +S+ + A P+ + ++ + T D++ + ++ S +
Sbjct: 1223 DSVEKKVSEIKDILAQSPAAEPLKNIGNLFEEAEKLTKDVREMMAQVEVKLSDTTSQSNS 1282
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D +++ + ++ + E+A+ + + + + +
Sbjct: 1283 TTKELDSLQIEAESLENTVKELAEQLEFIKNSDIRGALDSVTKYFQMSLEAEERVNASTI 1342
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1343 EPNSTVEQSALMRDRVEDVMM---EKESQFKEKQEEQARLLDELAGKLQSLDLSAASEMT 1399
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPE 311
+ G + R +K V + +
Sbjct: 1400 CGTPPGASCSESECGGPNC---RTDEGEKKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSA 1456
Query: 312 SLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR-----RVLTGIVLGT 366
+ + ++ + + A Q ++++ + + + + +
Sbjct: 1457 LAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEDLRNLIKQIRNFLTED 1516
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID--- 423
+ ++IE E+ L ++ P + + + ++ +L+++ I + D
Sbjct: 1517 SADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVE-VILQQSAADIAR 1572
Query: 424 --HILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1573 AEMLLEEAKRASKSATDVKVTADTVKEALEEAEKAQVAAEKAIKQADED 1621
>gi|325261042|ref|ZP_08127780.1| trigger factor (TF) [Clostridium sp. D5]
gi|324032496|gb|EGB93773.1| trigger factor (TF) [Clostridium sp. D5]
Length = 172
Score = 50.4 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Query: 287 FLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDS----I 342
+ +++ + +++ + + V E+ V + + ++ ++ +
Sbjct: 19 QMDKKEKEDYLINTLVDSSKVKVSETSVNDRAKRMAEEYALRLNQQGLSIEQYYQASNTD 78
Query: 343 DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF 402
++ ++ +A+R++ +L I E +I VTE+E+ + + R+P EKK+ +
Sbjct: 79 EKALVKKMQEIAERQLKGRKILEAIAEAESITVTEQEVDQEIKKLTIRYPVDEKKIKEIM 138
Query: 403 QKYPNALAELRAPIFEDKVIDHILKSV 429
+ LR I K +D++ +
Sbjct: 139 RGAEEQR--LRNDILVRKAMDYVSEHA 163
>gi|26553657|ref|NP_757591.1| hypothetical protein MYPE2040 [Mycoplasma penetrans HF-2]
gi|26453663|dbj|BAC43995.1| conserved hypothetical protein [Mycoplasma penetrans HF-2]
Length = 211
Score = 49.6 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/176 (11%), Positives = 59/176 (33%), Gaps = 9/176 (5%)
Query: 256 VVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVE 315
N + F + + + + + I +V + LVE
Sbjct: 15 DYNKQFVIEQLFADPKMLDVHVEKIRSVYKDASDNFIRNQIDHIIIKENAFNEVMKYLVE 74
Query: 316 NEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEV 375
+ E + + + ++ + LA++ + G++ + N +EV
Sbjct: 75 LF-----EFTYDETEVGSFRDKLKTTMTNLNDSQCEDLARKLIQKGLIFKVLARDNKLEV 129
Query: 376 TEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQI 431
++++ + L ++ ++ F E++ I E+K+ ++ +I
Sbjct: 130 SDDDAKKYLE----QYYKTTNNSINEFLNNNEKFDEIKDIILEEKITQWVISKFKI 181
>gi|219117401|ref|XP_002179495.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409386|gb|EEC49318.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 257
Score = 49.6 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
Query: 17 VIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVP 76
V R +++ +++ + +GFRPG +P + + +DE +E V
Sbjct: 96 VEADLGRFSEAIYKKLMQDAKQQRFQGFRPGTIPPHL-----EPTYRAFAMDECARETVL 150
Query: 77 EILSKRDERAAMRPSITINEGESDITSGL 105
E + + + R + + I
Sbjct: 151 EAMQQNNIRPFDSTQVEMTISNIKIPPVT 179
>gi|221060218|ref|XP_002260754.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193810828|emb|CAQ42726.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1134
Score = 49.6 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 44/393 (11%), Positives = 120/393 (30%), Gaps = 26/393 (6%)
Query: 90 PSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQ 149
P + E + S L + + + PQ + + + ++ +
Sbjct: 676 PGMEDIEFILNDKSPLYDNDDEEEEEEEARSHPQSLQTPPEGEVSGEQDYPGRDEGEKEE 735
Query: 150 MAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTE 209
A+ KN + + + +I + +++ V + + E
Sbjct: 736 EAQFNKNFDKYLEELLKDDINSLDEKIH------GKGATSKTEDILLNVYDPSEYEKCEE 789
Query: 210 ILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVF-SPLPVVVNNDLAVRLGFE 268
G++ + D+ + K L + ++ ND + +
Sbjct: 790 GNGKGGIGEE-SGDDETINDYILGKCDLVKCILEVHVLDIKSRKRNEQDINDYVKKKYNK 848
Query: 269 SESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKV--R 326
+ + ++ + + + + + + + +VP +L + + +
Sbjct: 849 TMDELHDEVEERAMKDIQNKCVDQRRMEAYKKLMEISSLNVPTTLFHAQGKILYSSYLKK 908
Query: 327 FEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ 386
+M S+ EE + +V ++ TI + ++V +++ + +
Sbjct: 909 KKMQSSENDKNEKVLSFEEFMNKSQKEIYDQVKFSFIVKTIFQNAKLKVNYDDVIKDVLK 968
Query: 387 QLGRFP-GHEKKMLDHFQKYPNALAELRAPIFEDKVIDHI-----LKSVQIVDRKVTFDQ 440
L + P + K ++ A V+D + + V F
Sbjct: 969 TLLKTPTNNVKSLIKKIHTIYQAQC----------VLDFVSLNGDISFATNNKSSVNFSV 1018
Query: 441 LFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
S+ + E+ L+ +E Q+ E+S
Sbjct: 1019 TMKKGSDYTKEEFLNADKSLEDAQAGPQTGEVS 1051
>gi|168012144|ref|XP_001758762.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689899|gb|EDQ76268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 136
Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Query: 14 ELDVIIPSNRLTDSFNERIEDIRSKAN-IKGFRPGK-----VPLSHIKSLYG-KSILSET 66
+L V + +F+ + + A + GFR K VP S + ++ G +
Sbjct: 2 QLRVDLTGQSTQKAFDTIVRSLAKNAPPVPGFRKAKGVCEQVPTSVLLNMMGVSRVRKFV 61
Query: 67 IDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
I+EI++ ++ E + + +A + +D + + E + + ++
Sbjct: 62 IEEIVRTVLVEYVEQEGIKAK---KNLATDKTADELNAIFEPGQEFGFDATLEL 112
>gi|298708169|emb|CBJ30509.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 200
Score = 49.2 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
Query: 12 KRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEII 71
K E D+ P R + + +I++K++ G+R G++P + I+E++
Sbjct: 75 KYEFDIEAPGPRTQSLHHRILREIKNKSDFPGYRKGEIPPRLM-----PEATKYVIEEVM 129
Query: 72 KEIVPEILSKRDERAA-MRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQ 123
E + L+ + A S + + + + + L ++D P+
Sbjct: 130 NEGLQTALATYNLVGAKGDGSEADIKNDIEDMLKVFKPGKPLSFSCTFDAKPK 182
>gi|221481828|gb|EEE20198.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 818
Score = 48.9 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 52/460 (11%), Positives = 130/460 (28%), Gaps = 55/460 (11%)
Query: 15 LDVIIPSNRLTDSFNERIEDIRSKANIKGFRP--GKVPLSHIKSLYG---KSILSETIDE 69
++ IP++ + I +R+ + G+R G+VPLS + Y ++ +
Sbjct: 231 IEADIPAHITQRVQDLTIAHLRTTLRVPGYRSGLGEVPLSML-QYYAGGVDAVKQRAVQA 289
Query: 70 IIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSF 129
+ ++ + + + + P +D + +K+++ D LP ++
Sbjct: 290 LGDLLLHQA-TNKGAKIIGTPQFV---QATDELTKKFHPGQSMKIQIRCDTLPTVKFKEN 345
Query: 130 ---DDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT---VSVDN 183
L+V + + ++ + + + +
Sbjct: 346 YRGLKLRVPRPPYPKGLLFQKAEEILAKRHAHEVDFPDDARRARMGDAAEIEVTRGWFET 405
Query: 184 VILEDQSKKNVQFIVGSADLFSETT----------EILVGLKTGDQKEIERF-FPEDHSI 232
+ I G + + + L+G++ GD +E+ +
Sbjct: 406 GEEARGDEIPTHLIAGKVTVILDKDCNPEGGAELVDGLLGIRKGDAREVRVPLPFSVKEM 465
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF----------------ESESAMRGL 276
+G N V+ + S +M
Sbjct: 466 LPFSGVDQIGNLPAGASTQTPSPRVSATGFLEGEQVPSEGSGGLGETERADGSGLSMVQA 525
Query: 277 CSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA--NQ 334
+++ + + K ILD + + I +++ E N+
Sbjct: 526 LAREAGEKCGIGFTDERKEHILDEDEERLVQTILHVKCLGVKRRIPRELNDEFYRKVLNE 585
Query: 335 KSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGH 394
+ E A + G V + + IE E + + +Q
Sbjct: 586 TRTDFMERLEATGDELVEAASVKARRGAVAAALDDITTIEAPE----TLIEEQARLTYKQ 641
Query: 395 EKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDR 434
+ ++ E+K + K+V +V +
Sbjct: 642 ------QLKSKEMEGQDVTGLDTEEKYQEWKSKNVNVVVK 675
>gi|225575798|ref|ZP_03784408.1| hypothetical protein RUMHYD_03891 [Blautia hydrogenotrophica DSM
10507]
gi|225037005|gb|EEG47251.1| hypothetical protein RUMHYD_03891 [Blautia hydrogenotrophica DSM
10507]
Length = 194
Score = 48.9 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 64/184 (34%), Gaps = 6/184 (3%)
Query: 253 LPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPES 312
V + VR+ FE + + E R+ + I + E
Sbjct: 12 PKVKLGEYRHVRVPFEDWKNAVEENIVRYRMSLENAERKAKEDLAAKEIVKRSQIQTSEE 71
Query: 313 LVENEYNGILQKVRFEMSSANQKSQNVD----SIDEEDLQYYHMLAKRRVLTGIVLGTIG 368
V +++ + + + ++E L+ A++++ +VL +
Sbjct: 72 EVTARAVQMMEAYALRLQQQGLSIEGYYRTKKTNEQELLEQMKEKARKQIQARMVLAAVA 131
Query: 369 EKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS 428
+ N+E T EE +++ R+ ++++ Q +R I +K + +
Sbjct: 132 QSENLEATVEEYDREVHKLAVRYLMSKEQVNKILQGEEGQR--IRQEIAVEKAAKFLAAN 189
Query: 429 VQIV 432
V++
Sbjct: 190 VKVN 193
>gi|297289124|ref|XP_001090393.2| PREDICTED: laminin subunit beta-1 [Macaca mulatta]
Length = 1786
Score = 48.9 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 40/409 (9%), Positives = 130/409 (31%), Gaps = 26/409 (6%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + ++ + D+ ++ ++ S +
Sbjct: 1221 DSVERKVSEIKDILAQSPAAEPLKNIGNLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 1280
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 1281 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTA 1340
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1341 EPNSTVEQSALMRDRVEDVMMER---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1397
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPE 311
+ G + R +K V + +
Sbjct: 1398 CGTPPGASCSETECGGPNC---RTDEGEKKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSA 1454
Query: 312 SLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR-----RVLTGIVLGT 366
+ + ++ + + A Q ++++ + + + + +
Sbjct: 1455 LSEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEDLRNLIKQIRNFLTQD 1514
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID--- 423
+ ++IE E+ L ++ P + + + ++ +L+++ I + D
Sbjct: 1515 SADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVE-VILQQSAADIAR 1570
Query: 424 --HILKSVQI-----VDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1571 AEMLLEEAKKASKSATDVKVTADMVKEALEEAEKAQVAAEKAIQQADED 1619
>gi|291231503|ref|XP_002735704.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 3906
Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 36/453 (7%), Positives = 120/453 (26%), Gaps = 37/453 (8%)
Query: 25 TDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILSKRDE 84
+S ++ + + + + K + E + ++ + L +
Sbjct: 2981 DESVHKELNNASKQV---------------EKQMQKQVELEVQQKEVENKAQKDLDDEE- 3024
Query: 85 RAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEK 144
+ + IN D + +I D + + + + E++
Sbjct: 3025 ---SQETEKINREIVDEKNRII-AKKDAAFEKEMLLKRKQLSDDEYQKLLEKHRQEMERL 3080
Query: 145 EIDRQMAEIAKNNVAFEVK-ETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGS-AD 202
+ + E E + ++ + + + ++ + + ++ +
Sbjct: 3081 AAAMDQEKERQKKSLQERFAERKKKMAEHLRKKHQAEMEKELGQQHMEREKKIEKEMRGK 3140
Query: 203 LFSETTEILVGLKTG-DQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDL 261
L G + +K++ + + +
Sbjct: 3141 ERPAIDSELQGEDVSAENVIYRVLRQRHIKETVNQNEKMKHERNAAIADARNKMEEARQS 3200
Query: 262 AVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQI------LDYISNKYTFDVPESLVE 315
E++ +E + K + L V ++ +
Sbjct: 3201 ERDELLEAQRQELMDLIANAGDMTEEELADKKDDLLRQHKTQLMEFDKVTGQRVEQAEKD 3260
Query: 316 NEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEV 375
+++ +++ ++ Q + + + +R +K E
Sbjct: 3261 VLPGLDVKQAHEKLALKEKQLQELADAMRDISHGEEDMVRRYSEEAAKAAEDAKKFR-ET 3319
Query: 376 TEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRK 435
+ ++ + Q + + +K L + FE + + +I +R
Sbjct: 3320 KMKTLKEQMDQIKAEKKKQDDERR---RKMQEQLKNIEDE-FEKQ---RLRDEQRIKERD 3372
Query: 436 VTFDQLFDNSSESSPEKLLDKSSKVETFQSEEA 468
+ +QL E ++L K ++
Sbjct: 3373 LEREQLRQQQREEREKRLRSDLDKETDESKKKK 3405
>gi|325847167|ref|ZP_08169966.1| hypothetical protein HMPREF9246_1887 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480947|gb|EGC83993.1| hypothetical protein HMPREF9246_1887 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 128
Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 48/115 (41%)
Query: 318 YNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTE 377
+ Q++R S Q + Y +A+ +V +V+ + K N+E T+
Sbjct: 1 MQNLDQRLRQMGISLQQYIEMTKMDMAAIRDQYRAVAEDKVKANLVMDEVALKENVEATD 60
Query: 378 EEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
EE+++ + ++ + + + + + I K ++ + K+V++V
Sbjct: 61 EEVEAEIKDAAKQYGVDDYEKFKEIFEKNVSRDTVIENIKRRKAVEILEKNVKLV 115
>gi|212696599|ref|ZP_03304727.1| hypothetical protein ANHYDRO_01139 [Anaerococcus hydrogenalis DSM
7454]
gi|212676330|gb|EEB35937.1| hypothetical protein ANHYDRO_01139 [Anaerococcus hydrogenalis DSM
7454]
Length = 128
Score = 48.5 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 48/115 (41%)
Query: 318 YNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTE 377
+ Q++R S Q + Y +A+ +V +V+ + K N+E ++
Sbjct: 1 MQNLDQRLRQMGISLQQYIEMTKMDMAAIRDQYRAVAEDKVKANLVMDEVALKENVEASD 60
Query: 378 EEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV 432
EE+++ + ++ + + + + + I K ++ + K+V++V
Sbjct: 61 EEVEAEIKDAAKQYGVDDYEKFKEIFEKNVSRDTVIENIKRRKAVEILEKNVKLV 115
>gi|297681283|ref|XP_002818388.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-1-like [Pongo
abelii]
Length = 1786
Score = 48.1 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 42/409 (10%), Positives = 129/409 (31%), Gaps = 26/409 (6%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + ++ + D+ ++ ++ S +
Sbjct: 1221 DSVERKVSEIKDILAQSPAAEPLKNIGNLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNG 1280
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+ + + + + +
Sbjct: 1281 TAKELDSLQTEAESLDNTVKELNGQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1340
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1341 EPNSTVEQSALMRDRVEDVMMER---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1397
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVP- 310
+ G + R +K V + +
Sbjct: 1398 CGTPPGASCSETECGGPNC---RTDEGEKKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSA 1454
Query: 311 ----ESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGT 366
E L + L+ + S+ + + + ++ D + + + +
Sbjct: 1455 LAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQIRNFLTQD 1514
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID--- 423
+ ++IE E+ L ++ P + + + ++ +L+++ I + D
Sbjct: 1515 SADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVE-IILQQSAADIAR 1570
Query: 424 --HILKSVQI-----VDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1571 AEMLLEEAKKASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1619
>gi|332098850|gb|EGJ03804.1| trigger factor domain protein [Shigella dysenteriae 155-74]
Length = 41
Score = 48.1 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 20/40 (50%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKAN 40
MQV + ++GL R + + I ++ + + + ++ K
Sbjct: 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVR 40
>gi|332237976|ref|XP_003268180.1| PREDICTED: laminin subunit beta-1 isoform 1 [Nomascus leucogenys]
Length = 1885
Score = 48.1 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 43/409 (10%), Positives = 131/409 (32%), Gaps = 26/409 (6%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + ++ + D+ ++ ++ S +
Sbjct: 1320 DSVERKVSEIKDILAQSPAAEPLKNIGNLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 1379
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 1380 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1439
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1440 EPNSTVEQSALMRDRVEDVMMEQ---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1496
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVP- 310
+ G + R +K V + +
Sbjct: 1497 CGTPPGASCSETECGGPNC---RTDEGEKKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSA 1553
Query: 311 ----ESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGT 366
E L + L+ + S+ + + + ++ D + + + +
Sbjct: 1554 LAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQIRNFLTQD 1613
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID--- 423
+ ++IE E+ L ++ P + + + ++ +L+++ I + D
Sbjct: 1614 SADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVE-VILQQSAADIAR 1669
Query: 424 --HILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1670 AEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1718
>gi|332237978|ref|XP_003268181.1| PREDICTED: laminin subunit beta-1 isoform 2 [Nomascus leucogenys]
Length = 1810
Score = 48.1 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 43/409 (10%), Positives = 131/409 (32%), Gaps = 26/409 (6%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + ++ + D+ ++ ++ S +
Sbjct: 1245 DSVERKVSEIKDILAQSPAAEPLKNIGNLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 1304
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 1305 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1364
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1365 EPNSTVEQSALMRDRVEDVMMEQ---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1421
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVP- 310
+ G + R +K V + +
Sbjct: 1422 CGTPPGASCSETECGGPNC---RTDEGEKKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSA 1478
Query: 311 ----ESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGT 366
E L + L+ + S+ + + + ++ D + + + +
Sbjct: 1479 LAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQIRNFLTQD 1538
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID--- 423
+ ++IE E+ L ++ P + + + ++ +L+++ I + D
Sbjct: 1539 SADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVE-VILQQSAADIAR 1594
Query: 424 --HILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1595 AEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1643
>gi|237843347|ref|XP_002370971.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211968635|gb|EEB03831.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|221502327|gb|EEE28060.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 818
Score = 47.7 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 52/460 (11%), Positives = 131/460 (28%), Gaps = 55/460 (11%)
Query: 15 LDVIIPSNRLTDSFNERIEDIRSKANIKGFRP--GKVPLSHIKSLYG---KSILSETIDE 69
++ IP++ + I +R+ + G+R G+VPLS + Y ++ +
Sbjct: 231 IEADIPAHITQRVQDLTIAHLRTTLRVPGYRSGLGEVPLSML-QYYAGGVDAVKQRAVQA 289
Query: 70 IIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSF 129
+ ++ + + + + P +D + +K+++ D LP ++
Sbjct: 290 LGDLLLHQA-TNKGAKIIGTPQFV---QATDELTKKFHPGQSMKIQIRCDTLPTVKFKEN 345
Query: 130 ---DDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT---VSVDN 183
L+V + + ++ + + + + +
Sbjct: 346 YRGLKLRVPRPPYPKGLLFQKAEEILAKRHAHEVDFPDDDRRARMGDAAEIEVTRGWFET 405
Query: 184 VILEDQSKKNVQFIVGSADLFSETT----------EILVGLKTGDQKEIERF-FPEDHSI 232
+ I G + + + L+G++ GD +E+ +
Sbjct: 406 GEEARGDEIPTHLIAGKVTVILDKDCNPEGGAELVDGLLGIRKGDAREVRVPLPFSVKEM 465
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF----------------ESESAMRGL 276
+G N V+ + S +M
Sbjct: 466 LPFSGVDQIGNLPAGASTQTPSPRVSATGFLEGEQVPSEGSGGLGETERADGSGLSMVQA 525
Query: 277 CSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA--NQ 334
+++ + + K ILD + + I +++ E N+
Sbjct: 526 LAREAGEKCGIGFTDERKEHILDEDEERLVQTILHVKCLGVKRRIPRELNDEFYRKVLNE 585
Query: 335 KSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGH 394
+ E A + G V + + IE E + + +Q
Sbjct: 586 TRTDFMERLEATGDELVEAASVKARRGAVAAALDDITTIEAPE----TLIEEQARLTYKQ 641
Query: 395 EKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDR 434
+ ++ E+K + K+V +V +
Sbjct: 642 ------QLKSKEMEGQDVTGLDTEEKYQEWKSKNVNVVVK 675
>gi|302669067|ref|YP_003832892.1| trigger factor C-terminal domain-containing protein [Butyrivibrio
proteoclasticus B316]
gi|302397407|gb|ADL36310.1| trigger factor C-terminal domain-containing protein [Butyrivibrio
proteoclasticus B316]
Length = 408
Score = 47.7 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 44/357 (12%), Positives = 119/357 (33%), Gaps = 24/357 (6%)
Query: 127 SSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVIL 186
+ + ++++T + E E ++ ++ IAK+ + V + T + +
Sbjct: 42 NDYRNMEITTTLKEATEDDVKEELEHIAKDYNYVVPIDKAVSSDSTVDISLTKKNADGSI 101
Query: 187 EDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGK-------- 238
++ S ++G+ + +E E ++GL G+ KE E +
Sbjct: 102 DEASTLTATIVLGNDSVPAELEEAVIGLSKGETKEFESTDSSGEKTPYVVEVVTVYEYGE 161
Query: 239 -KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVR-QKVKRQ 296
+ + + L L +++ + +I + ++
Sbjct: 162 ITDDIAGGLGIDGVTDLESLKKYLIDALNRDNKDIYKNELKTEISNTLYNNCKVNNIQEH 221
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ + + + + + + +++ S + + E+ + Y A+R
Sbjct: 222 LKNEYYDILYKQLTDLVEYYSDTSEEEVTLYDLVSPTMEKEGYVGTTEDYIAYC---AER 278
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
++ I EK +I V + + S + D +
Sbjct: 279 NAKLYLIYKAIAEKESISVDDIDAYSLAATDWASQTSEYDTLKDFISDN--SFESYERDA 336
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
D V+D+++ + +F + S +P ++ + ++ EEA +E+S
Sbjct: 337 LADAVMDYLVN--------LYAGDIFKDDSSDAPGEISQDENSLDE-ALEEASNELS 384
>gi|194209474|ref|XP_001915354.1| PREDICTED: laminin, beta 1 [Equus caballus]
Length = 1711
Score = 47.7 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 52/411 (12%), Positives = 133/411 (32%), Gaps = 30/411 (7%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDL 132
+ V + +S+ + A P+ + ++ + T D+ +++ + + +S +
Sbjct: 1146 DSVEKKVSEIRDILAQSPAAEPLKNIGNLFEEAEKLTKDVTEKMAQAEVTLADTASQSNS 1205
Query: 133 QVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKK 192
+ E E + + F D +T + +S++ + S
Sbjct: 1206 TAKELDALQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1265
Query: 193 NVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSP 252
+ V + + E L + G+ + E + + +LAGK L+ S +
Sbjct: 1266 DSSSTVEQSAFTRDKVEAL--IVEGESQFRENQEEQAGLLDELAGKLQSLDLSAAAEMTC 1323
Query: 253 LPVVVNNDLAVRLGFESESAMRGLCSQK--------IKQHSEFLVRQKVKRQILDYISNK 304
+ G + G HS + R +L ++
Sbjct: 1324 GTPPGASCSETECGGPNCRTDDGQKKCGGPGCGGLVTVAHSAWQKAMDFDRDVLSALAEV 1383
Query: 305 YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVL 364
S + + Q + + N + VD +E+ + +
Sbjct: 1384 EQLSKMVSEAKLRADEAKQNAQDVLLKTNATKEKVDKSNEDLRDLIKQI------RNFLT 1437
Query: 365 GTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID- 423
+ ++IE E+ L ++ P + + + ++ +L+++ I + D
Sbjct: 1438 QDSADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVE-VILQQSAADI 1493
Query: 424 ----HILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1494 ARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQIAAEKAIKQADED 1544
>gi|321310986|ref|YP_004193315.1| trigger factor [Mycoplasma haemofelis str. Langford 1]
gi|319802830|emb|CBY93476.1| trigger factor [Mycoplasma haemofelis str. Langford 1]
Length = 393
Score = 47.3 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 48/352 (13%), Positives = 101/352 (28%), Gaps = 36/352 (10%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYG- 59
M++++ E L V S + + +N D+ + NI GFR GK L + +
Sbjct: 1 MKILDSRVEDKHIFLTVESNSEKFKEIYNRHFLDLSKRLNIPGFRKGKASLDVVLNYVKS 60
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVD-------- 111
+ L + + + S INE D + VD
Sbjct: 61 RGALDSETNNAV------------FKVVSYYSGEINEFNEDWKDKIFGKQVDHSVKELDL 108
Query: 112 ----LKLRLSYDILPQIEISSFDDLQVTQ---------DICEVDEKEIDRQMAEIAKNNV 158
L +++ +P++ ++ + + + + K +A IA
Sbjct: 109 GTWKLVYEATFEKVPEVTLADYQKISTLVEEKSLDELFWPVKKEGKPEAGDVAVIAMRAK 168
Query: 159 AFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD 218
E + D + VD + S + + D K++ + V K D
Sbjct: 169 NKEGESMPKYSYDFLEVDLSNSHLDSRILDAIKESKNEVELDNCKLEIRLLECVQKKAID 228
Query: 219 QKEIERFFPEDHSIKDLAGK--KVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGL 276
++ I+ + + K K + V +L +R
Sbjct: 229 EQLIKDTPFPKKTTPEEVKKLIKNQFEMQNLSSRHREIVKWILSADNKLDPMPVETLRTE 288
Query: 277 CSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFE 328
+ + ++ + + N +Q+ E
Sbjct: 289 TYKGFQMLRRRGNNNITFEDLMVENIKNLKLSCVLDAISKKENLSIQEGDQE 340
>gi|325119986|emb|CBZ55539.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 825
Score = 47.3 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 50/452 (11%), Positives = 121/452 (26%), Gaps = 47/452 (10%)
Query: 15 LDVIIPSNRLTDSFNERIEDIRSKANIKGFRPG--KVPLSHIKSLY---GKSILSETIDE 69
++ IP + + +R+ + G+R G +VPL+ + Y ++ +
Sbjct: 243 IEADIPGHITQKVQELTLAHLRTTLRVPGYRSGLAEVPLAML-QYYAGGADAVKQRAVQA 301
Query: 70 IIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEI--- 126
+ ++ + +K+ + P + +K+++ D LP ++
Sbjct: 302 LGDLLLHQA-TKKGTKMIGTPQFVQKDS---ELVANFTPGQSMKIQIRCDTLPTVKFKQN 357
Query: 127 SSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYT---VSVDN 183
L+V + + ++ + + V+ +
Sbjct: 358 YKGLKLRVPRPPYPEGLLFQKAEEILAKRHATEVDFPNADRRARVGDAVEIEVIRGWFET 417
Query: 184 VILEDQSKKNVQFIVGSADLFSETT----------EILVGLKTGDQKEIERF-FPEDHSI 232
+ I G + + + L+G++ GD +E+ +
Sbjct: 418 GDETRGDEIPKHLIAGVVTVILDKDCNPEGGAELLDGLLGIRKGDAREVRVPLPFSVKEM 477
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQK 292
+G + P L E+ + +K
Sbjct: 478 LPFSGIEQVGKLPSSASSQAAPPSPRVSATGFLEGEAAAGGGDGSGLATVDALAREASEK 537
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA----------NQKSQNVDSI 342
+ D E LV+ + V+ + N
Sbjct: 538 CGIDLTDERKEHILDQDEERLVQTILHVQCLGVKRRIPRELDDAFYRTFLNATRAEFMEQ 597
Query: 343 DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF 402
E A + G V + + IE E + + +Q
Sbjct: 598 LEATGDELVEAASVKARRGAVAAALDDITTIEAPE----TLIEEQARLTYKQ------QL 647
Query: 403 QKYPNALAELRAPIFEDKVIDHILKSVQIVDR 434
+ ++ E+K + K+V +V +
Sbjct: 648 KSKEMEGHDVTGLDTEEKYQEWKCKNVNVVVK 679
>gi|330720056|gb|EGG98481.1| Cell division trigger factor [gamma proteobacterium IMCC2047]
Length = 50
Score = 46.9 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRS 37
MQV + ++R L V +P+ R+ R++
Sbjct: 1 MQVSVENLSPIERRLTVGVPAERIETEVESRLQKAAK 37
>gi|223462235|gb|AAI50810.1| Laminin B1 subunit 1 [Mus musculus]
Length = 1834
Score = 46.5 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 45/412 (10%), Positives = 129/412 (31%), Gaps = 32/412 (7%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL-SYDILPQIEISSFDD 131
+ V + +++ + A P+ + + + T D+ ++ ++ S +
Sbjct: 1269 DSVEKKVNEIKDILAQSPAAEPLKNIGILFEEAEKLTKDVTEKMAQVEVKLTDTASQSNS 1328
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ + + +D+ + E+A+ + + + + + +
Sbjct: 1329 TAGELGALQAEAESLDKTVKELAEQLEFIKNSDIQGALDSITKYFQMSLEAEKRVNASTT 1388
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ SA ++++ + E+ + + +LAGK L+ S +
Sbjct: 1389 DPNSTVEQSALTRDRVEDLMLER---ESPFKEQQEEQARLLDELAGKLQSLDLSAAAQMT 1445
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQK--------IKQHSEFLVRQKVKRQILDYISN 303
+ G + G HS + R +L ++
Sbjct: 1446 CGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVLSALAE 1505
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
S + + Q + + N + VD +E+ + +
Sbjct: 1506 VEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQI------RNFL 1559
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
+ ++IE E+ L ++ P + + + ++ L+++ I + D
Sbjct: 1560 TEDSADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVETLSQVE-VILQQSAAD 1615
Query: 424 -----HILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1616 IARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1667
>gi|74181151|dbj|BAE27840.1| unnamed protein product [Mus musculus]
Length = 1834
Score = 46.5 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 45/412 (10%), Positives = 129/412 (31%), Gaps = 32/412 (7%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL-SYDILPQIEISSFDD 131
+ V + +++ + A P+ + + + T D+ ++ ++ S +
Sbjct: 1269 DSVEKKVNEIKDILAQSPAAEPLKNIGILFEEAEKLTKDVTEKMAQVEVKLTDTASQSNS 1328
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ + + +D+ + E+A+ + + + + + +
Sbjct: 1329 TAGELGALQAEAESLDKTVKELAEQLEFIKNSDIQGALDSITKYFQMSLEAEKRVNASTT 1388
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ SA ++++ + E+ + + +LAGK L+ S +
Sbjct: 1389 DPNSTVEQSALTRDRVEDLMLER---ESPFKEQQEEQARLLDELAGKLQSLDLSAVAQMT 1445
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQK--------IKQHSEFLVRQKVKRQILDYISN 303
+ G + G HS + R +L ++
Sbjct: 1446 CGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVLSALAE 1505
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
S + + Q + + N + VD +E+ + +
Sbjct: 1506 VEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQI------RNFL 1559
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
+ ++IE E+ L ++ P + + + ++ L+++ I + D
Sbjct: 1560 TEDSADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVETLSQVE-VILQQSAAD 1615
Query: 424 -----HILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1616 IARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1667
>gi|148704971|gb|EDL36918.1| laminin B1 subunit 1 [Mus musculus]
Length = 1849
Score = 46.5 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 45/412 (10%), Positives = 129/412 (31%), Gaps = 32/412 (7%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL-SYDILPQIEISSFDD 131
+ V + +++ + A P+ + + + T D+ ++ ++ S +
Sbjct: 1284 DSVEKKVNEIKDILAQSPAAEPLKNIGILFEEAEKLTKDVTEKMAQVEVKLTDTASQSNS 1343
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ + + +D+ + E+A+ + + + + + +
Sbjct: 1344 TAGELGALQAEAESLDKTVKELAEQLEFIKNSDIQGALDSITKYFQMSLEAEKRVNASTT 1403
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ SA ++++ + E+ + + +LAGK L+ S +
Sbjct: 1404 DPNSTVEQSALTRDRVEDLMLER---ESPFKEQQEEQARLLDELAGKLQSLDLSAVAQMT 1460
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQK--------IKQHSEFLVRQKVKRQILDYISN 303
+ G + G HS + R +L ++
Sbjct: 1461 CGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVLSALAE 1520
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
S + + Q + + N + VD +E+ + +
Sbjct: 1521 VEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQI------RNFL 1574
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
+ ++IE E+ L ++ P + + + ++ L+++ I + D
Sbjct: 1575 TEDSADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVETLSQVE-VILQQSAAD 1630
Query: 424 -----HILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1631 IARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1682
>gi|114326497|ref|NP_032508.2| laminin subunit beta-1 [Mus musculus]
Length = 1834
Score = 46.5 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 45/412 (10%), Positives = 129/412 (31%), Gaps = 32/412 (7%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL-SYDILPQIEISSFDD 131
+ V + +++ + A P+ + + + T D+ ++ ++ S +
Sbjct: 1269 DSVEKKVNEIKDILAQSPAAEPLKNIGILFEEAEKLTKDVTEKMAQVEVKLTDTASQSNS 1328
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ + + +D+ + E+A+ + + + + + +
Sbjct: 1329 TAGELGALQAEAESLDKTVKELAEQLEFIKNSDIQGALDSITKYFQMSLEAEKRVNASTT 1388
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ SA ++++ + E+ + + +LAGK L+ S +
Sbjct: 1389 DPNSTVEQSALTRDRVEDLMLER---ESPFKEQQEEQARLLDELAGKLQSLDLSAVAQMT 1445
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQK--------IKQHSEFLVRQKVKRQILDYISN 303
+ G + G HS + R +L ++
Sbjct: 1446 CGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVLSALAE 1505
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
S + + Q + + N + VD +E+ + +
Sbjct: 1506 VEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQI------RNFL 1559
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
+ ++IE E+ L ++ P + + + ++ L+++ I + D
Sbjct: 1560 TEDSADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVETLSQVE-VILQQSAAD 1615
Query: 424 -----HILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1616 IARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1667
>gi|254417887|ref|ZP_05031611.1| SurA N-terminal domain family [Brevundimonas sp. BAL3]
gi|196184064|gb|EDX79040.1| SurA N-terminal domain family [Brevundimonas sp. BAL3]
Length = 393
Score = 46.5 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 13/112 (11%), Positives = 37/112 (33%), Gaps = 1/112 (0%)
Query: 309 VPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIG 368
+ + +V + I+ + + E++L A R++ +
Sbjct: 1 MADGIVATVNDKIITGFDLRQQMLMLIASSQVQPTEQNLPAIQQAALNRLIEQRLKAQEI 60
Query: 369 EKNN-IEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
K ++VT++E+ + Q + ++ Q+ R + +
Sbjct: 61 TKFESLKVTDQEIDEEIAQMARQAGVTPAAYMEFLQQGGIQPNAFRESLRTE 112
>gi|331092250|ref|ZP_08341078.1| hypothetical protein HMPREF9477_01721 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401682|gb|EGG81261.1| hypothetical protein HMPREF9477_01721 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 385
Score = 46.5 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 29/275 (10%), Positives = 97/275 (35%), Gaps = 22/275 (8%)
Query: 201 ADLFSETTEILVGLKTGDQKEIERFFPEDH---SIKDLAGKKVRLNFSIKEVFSPLPVVV 257
E + G K + ++ FPE + +L+G V I + +
Sbjct: 122 EQYVDGFEEGIYGHKLNETFDLPVKFPEGYGGTEQPELSGADVIFTIKITGIKERAYSEL 181
Query: 258 NNDLAVR--LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVE 315
N++ E+ + ++I++ ++ +++ + + +
Sbjct: 182 NDEFVKAVSKKSETVEEYKEEVKKEIEKMNKKQAEAELRDNAWNEVMDNAEIVKYPEKRL 241
Query: 316 NEYNGILQKVRFEMSSA------NQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGE 369
E +++ ++ + + +++ + ++K + +V I +
Sbjct: 242 KEKEKAIEEQLKKLVEQSYGVSYEEFLKQSGQSEDDFKKQVKEMSKESLKPALVAELIAK 301
Query: 370 KNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSV 429
+ +E++++EM+ + + L N ++ I ++KV++ +
Sbjct: 302 EEGLEISDKEMKKEMKVFAKENGYPDADTLVEL----NGEDMVKEAILQNKVMEWAADNC 357
Query: 430 QIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQ 464
+ V++K + + ++ + +K +T +
Sbjct: 358 KQVEKK-------KENKQDEKKEENKEGNKEKTTK 385
>gi|219113559|ref|XP_002186363.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583213|gb|ACI65833.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 213
Score = 46.5 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 8/107 (7%)
Query: 15 LDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEI 74
+ + + + ++ ++D KAN GFR G+VP I ++ E I +
Sbjct: 85 MTAEVEGALIKEIRSQILKDAAKKANFPGFRKGQVPP-----YAQPQITGFSVQEAIIKT 139
Query: 75 VPEILSKRDER--AAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
V ++ + I +NE I+ G + ++ ++
Sbjct: 140 VEAAVNSFGLKSIPGSAGEINVNEDVEAISKG-YKVGDNINFTAKFN 185
>gi|154253778|ref|YP_001414602.1| SurA domain-containing protein [Parvibaculum lavamentivorans DS-1]
gi|154157728|gb|ABS64945.1| SurA domain [Parvibaculum lavamentivorans DS-1]
Length = 443
Score = 46.5 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 53/155 (34%), Gaps = 7/155 (4%)
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ + + + I+ + + E++ R ++
Sbjct: 42 LAQNAPSNTQGIAAVVNDRIISSYDLDQRVKLVMLSSGIPDTPENISRIRGQVLRSLVDE 101
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ + NIEV +EE+ SAL + R ++ + + A L A I D
Sbjct: 102 YLQQQEAARLNIEVQQEEIDSALQRIAQRANMSVDQIEAFLKDGGVSRAALEAQIRSDIA 161
Query: 422 IDHILKS-----VQIVDRKVTFDQLFDNSSESSPE 451
+ +++ V + D ++ D++ E S +
Sbjct: 162 WNRVIQQQFGPSVTVGDVEI--DEVLRRLEEESDQ 194
>gi|168058265|ref|XP_001781130.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667448|gb|EDQ54078.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 2302
Score = 46.2 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 42/398 (10%), Positives = 108/398 (27%), Gaps = 14/398 (3%)
Query: 75 VPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQV 134
V + + D R P + + D + ++ ++ + + + I +
Sbjct: 1560 VTAAIYEGDSRIPCSPVFIVKQSGQDDSCHVLGTSIAVPSFPHLEFQ-KTVIPEAETFIP 1618
Query: 135 TQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNV 194
+E + Q+ + V+ S S + +
Sbjct: 1619 DSTSEPSNELVLHSQLKLTSSPASMLRVEPQCSSNLINAVPGSLASNPGLPRSNLVSSMR 1678
Query: 195 QFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLP 254
FI + + + K+ R + L
Sbjct: 1679 SFIPLVQHQQPAAPYPNGKRDVKVKALEAAEAARRAAEQKELEKQERKKAAELAKREKLE 1738
Query: 255 VVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLV 314
+ LA + E + + + + V + IL + LV
Sbjct: 1739 RAAQDKLAKKEKAAQEKLLHQEARAE-ESNKRKAVAAGTTKSILVDSATCKGSSNQNMLV 1797
Query: 315 ENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIE 374
+ + L+ + + ++ + A++R + +
Sbjct: 1798 KVKKTYELKLKMDQDKQERLLEEQRRKEEDWKKKEAENAARKRK----------HEAAEK 1847
Query: 375 VTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDR 434
+ E + L + + E++ ++ L E K I+ +K + +++
Sbjct: 1848 KEKMEKRRRLEEVMKANREMEERQRLELERKAQKQKALEEMEKERKTIEEEIKRQKRLEK 1907
Query: 435 KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEI 472
+ +Q E E +S + + EEA ++
Sbjct: 1908 EKEVEQRRKK--EEERELAWLESKEATRKRKEEAAKQL 1943
>gi|38197240|gb|AAH26018.2| LAMB1 protein [Homo sapiens]
Length = 1083
Score = 45.8 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 42/411 (10%), Positives = 130/411 (31%), Gaps = 30/411 (7%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + ++ + D+ ++ ++ S +
Sbjct: 518 DSVERKVSEIKDILAQSPAAEPLKNIGNLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 577
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 578 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 637
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 638 EPNSTVEQSALMRDRVEDVMMER---ESQFKEKQEEQARLLYELAGKLQSLDLSAAAEMT 694
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCS--------QKIKQHSEFLVRQKVKRQILDYISN 303
+ G + G H+ + + + +L ++
Sbjct: 695 CGTPPGASCSETECGGPNCRTDEGERKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSALAE 754
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
S + + Q + N + +D +EE + +
Sbjct: 755 VEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQI------RNFL 808
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV-- 421
+ ++IE E+ L ++ P + + + ++ +L+++ +
Sbjct: 809 TQDSADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVEVILQHSAADI 865
Query: 422 --IDHILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ +L+ + D KVT D + + E+ ++ + + + +
Sbjct: 866 ARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 916
>gi|330837929|ref|YP_004412509.1| hypothetical protein Selsp_0069 [Selenomonas sputigena ATCC 35185]
gi|329745693|gb|AEB99049.1| hypothetical protein Selsp_0069 [Selenomonas sputigena ATCC 35185]
Length = 635
Score = 45.8 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 76/217 (35%), Gaps = 14/217 (6%)
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+ A ++ +K + S V +D+ + ES IK ++
Sbjct: 220 YLDDIDAALYKYISTKVKCICSFRMVRYVDDMYILFSSESAFEELHETYNIIKNEYSSIL 279
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ K + K T + L ++ Y+ Q+ ++ + N + S + L+
Sbjct: 280 KGKGLALNMKKCCLKETTKLKGELKKSLYDRSFQEEKWRIK--NTFVSEIGSFLDALLEE 337
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-----RFPGHEKKMLDHFQK 404
+ ++ N++EVT +E+ +++ + R P K++ +K
Sbjct: 338 LSNDSLDTERYNEIIDKYFSLNDMEVTPDEIFNSVIYESRNNLMWRNPFIVDKIMRLIKK 397
Query: 405 Y-------PNALAELRAPIFEDKVIDHILKSVQIVDR 434
P L + E+KVI L + D+
Sbjct: 398 NIAFITLDPKRLTSMILKTREEKVIKAFLAQLFKKDK 434
>gi|119603829|gb|EAW83423.1| laminin, beta 1, isoform CRA_a [Homo sapiens]
Length = 1810
Score = 45.8 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 42/411 (10%), Positives = 130/411 (31%), Gaps = 30/411 (7%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + ++ + D+ ++ ++ S +
Sbjct: 1245 DSVERKVSEIKDILAQSPAAEPLKNIGNLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 1304
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 1305 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1364
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1365 EPNSTVEQSALMRDRVEDVMMER---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1421
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCS--------QKIKQHSEFLVRQKVKRQILDYISN 303
+ G + G H+ + + + +L ++
Sbjct: 1422 CGTPPGASCSETECGGPNCRTDEGERKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSALAE 1481
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
S + + Q + N + +D +EE + +
Sbjct: 1482 VEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQI------RNFL 1535
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV-- 421
+ ++IE E+ L ++ P + + + ++ +L+++ +
Sbjct: 1536 TQDSADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVEVILQHSAADI 1592
Query: 422 --IDHILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ +L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1593 ARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1643
>gi|186837|gb|AAA59482.1| laminin B1 [Homo sapiens]
gi|186876|gb|AAA59485.1| laminin B1 [Homo sapiens]
gi|186913|gb|AAA59486.1| laminin B1 [Homo sapiens]
gi|168275776|dbj|BAG10608.1| laminin subunit beta-1 precursor [synthetic construct]
Length = 1786
Score = 45.8 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 42/411 (10%), Positives = 130/411 (31%), Gaps = 30/411 (7%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + ++ + D+ ++ ++ S +
Sbjct: 1221 DSVERKVSEIKDILAQSPAAEPLKNIGNLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 1280
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 1281 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1340
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1341 EPNSTVEQSALMRDRVEDVMMER---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1397
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCS--------QKIKQHSEFLVRQKVKRQILDYISN 303
+ G + G H+ + + + +L ++
Sbjct: 1398 CGTPPGASCSETECGGPNCRTDEGERKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSALAE 1457
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
S + + Q + N + +D +EE + +
Sbjct: 1458 VEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQI------RNFL 1511
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV-- 421
+ ++IE E+ L ++ P + + + ++ +L+++ +
Sbjct: 1512 TQDSADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVEVILQHSAADI 1568
Query: 422 --IDHILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ +L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1569 ARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1619
>gi|167614504|ref|NP_002282.2| laminin subunit beta-1 precursor [Homo sapiens]
gi|317373377|sp|P07942|LAMB1_HUMAN RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin B1 chain;
AltName: Full=Laminin-1 subunit beta; AltName:
Full=Laminin-10 subunit beta; AltName: Full=Laminin-12
subunit beta; AltName: Full=Laminin-2 subunit beta;
AltName: Full=Laminin-6 subunit beta; AltName:
Full=Laminin-8 subunit beta; Flags: Precursor
gi|51095145|gb|EAL24388.1| laminin, beta 1 [Homo sapiens]
gi|109731041|gb|AAI13456.1| Laminin, beta 1 [Homo sapiens]
gi|119603830|gb|EAW83424.1| laminin, beta 1, isoform CRA_b [Homo sapiens]
Length = 1786
Score = 45.8 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 42/411 (10%), Positives = 130/411 (31%), Gaps = 30/411 (7%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + ++ + D+ ++ ++ S +
Sbjct: 1221 DSVERKVSEIKDILAQSPAAEPLKNIGNLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 1280
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 1281 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1340
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1341 EPNSTVEQSALMRDRVEDVMMER---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1397
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCS--------QKIKQHSEFLVRQKVKRQILDYISN 303
+ G + G H+ + + + +L ++
Sbjct: 1398 CGTPPGASCSETECGGPNCRTDEGERKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSALAE 1457
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
S + + Q + N + +D +EE + +
Sbjct: 1458 VEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQI------RNFL 1511
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV-- 421
+ ++IE E+ L ++ P + + + ++ +L+++ +
Sbjct: 1512 TQDSADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVEVILQHSAADI 1568
Query: 422 --IDHILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ +L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1569 ARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1619
>gi|260887552|ref|ZP_05898815.1| hypothetical protein SELSPUOL_01397 [Selenomonas sputigena ATCC
35185]
gi|260862727|gb|EEX77227.1| hypothetical protein SELSPUOL_01397 [Selenomonas sputigena ATCC
35185]
Length = 510
Score = 45.8 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 76/217 (35%), Gaps = 14/217 (6%)
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+ A ++ +K + S V +D+ + ES IK ++
Sbjct: 95 YLDDIDAALYKYISTKVKCICSFRMVRYVDDMYILFSSESAFEELHETYNIIKNEYSSIL 154
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ K + K T + L ++ Y+ Q+ ++ + N + S + L+
Sbjct: 155 KGKGLALNMKKCCLKETTKLKGELKKSLYDRSFQEEKWRIK--NTFVSEIGSFLDALLEE 212
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLG-----RFPGHEKKMLDHFQK 404
+ ++ N++EVT +E+ +++ + R P K++ +K
Sbjct: 213 LSNDSLDTERYNEIIDKYFSLNDMEVTPDEIFNSVIYESRNNLMWRNPFIVDKIMRLIKK 272
Query: 405 Y-------PNALAELRAPIFEDKVIDHILKSVQIVDR 434
P L + E+KVI L + D+
Sbjct: 273 NIAFITLDPKRLTSMILKTREEKVIKAFLAQLFKKDK 309
>gi|114778682|ref|ZP_01453494.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mariprofundus
ferrooxydans PV-1]
gi|114551044|gb|EAU53606.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Mariprofundus
ferrooxydans PV-1]
Length = 570
Score = 45.8 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 15/130 (11%), Positives = 44/130 (33%), Gaps = 5/130 (3%)
Query: 312 SLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKN 371
+ V N +V + + S + + ++ + K
Sbjct: 26 AAVVNNEAITCSQVDQDAQIMLTQLHQSGSTFIPAASELNQRSLDGLIVKTLQKQEARKL 85
Query: 372 NIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYP----NALAELRAPIFEDKVID-HIL 426
++V++EE+ A+ ++ ++ + LR I ++K+++ +
Sbjct: 86 ELKVSDEELDDAIKNVAASNNLTPDQLKAAVEQQGMHYDEYRSNLREQILKNKLVNVAVR 145
Query: 427 KSVQIVDRKV 436
+Q+ + V
Sbjct: 146 SKIQVSEEAV 155
>gi|114615458|ref|XP_001165635.1| PREDICTED: laminin, beta 1 isoform 5 [Pan troglodytes]
Length = 1786
Score = 45.8 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 41/408 (10%), Positives = 129/408 (31%), Gaps = 24/408 (5%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + + + D+ ++ ++ S +
Sbjct: 1221 DSVERKVSEIKDILAQSPAAEPLKNIGYLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 1280
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 1281 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1340
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1341 EPNSTVEQSALMRDRVEDVMMER---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1397
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVP- 310
+ G + R +K V + +
Sbjct: 1398 CGTPPGASCSETECGGPNC---RTDEGEKKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSA 1454
Query: 311 ----ESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGT 366
E L + L+ + S+ + + + ++ D + + + +
Sbjct: 1455 LAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQIRNFLTQD 1514
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV----I 422
+ ++IE E+ L ++ P + + + ++ +L+++ +
Sbjct: 1515 SADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVEVILQHSAADIARA 1571
Query: 423 DHILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ +L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1572 EMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1619
>gi|332868295|ref|XP_001165667.2| PREDICTED: laminin subunit beta-1 isoform 6 [Pan troglodytes]
Length = 1786
Score = 45.8 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 41/408 (10%), Positives = 129/408 (31%), Gaps = 24/408 (5%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + + + D+ ++ ++ S +
Sbjct: 1221 DSVERKVSEIKDILAQSPAAEPLKNIGYLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 1280
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 1281 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1340
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1341 EPNSTVEQSALMRDRVEDVMMER---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1397
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVP- 310
+ G + R +K V + +
Sbjct: 1398 CGTPPGASCSETECGGPNC---RTDEGEKKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSA 1454
Query: 311 ----ESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGT 366
E L + L+ + S+ + + + ++ D + + + +
Sbjct: 1455 LAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQIRNFLTQD 1514
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV----I 422
+ ++IE E+ L ++ P + + + ++ +L+++ +
Sbjct: 1515 SADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVEVILQHSAADIARA 1571
Query: 423 DHILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ +L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1572 EMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1619
>gi|114615464|ref|XP_001165530.1| PREDICTED: laminin, beta 1 isoform 2 [Pan troglodytes]
Length = 1754
Score = 45.8 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 41/408 (10%), Positives = 129/408 (31%), Gaps = 24/408 (5%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + + + D+ ++ ++ S +
Sbjct: 1221 DSVERKVSEIKDILAQSPAAEPLKNIGYLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 1280
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 1281 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1340
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1341 EPNSTVEQSALMRDRVEDVMMER---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1397
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVP- 310
+ G + R +K V + +
Sbjct: 1398 CGTPPGASCSETECGGPNC---RTDEGEKKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSA 1454
Query: 311 ----ESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGT 366
E L + L+ + S+ + + + ++ D + + + +
Sbjct: 1455 LAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQIRNFLTQD 1514
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV----I 422
+ ++IE E+ L ++ P + + + ++ +L+++ +
Sbjct: 1515 SADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVEVILQHSAADIARA 1571
Query: 423 DHILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ +L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1572 EMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1619
>gi|114615456|ref|XP_001165596.1| PREDICTED: laminin, beta 1 isoform 4 [Pan troglodytes]
Length = 1872
Score = 45.8 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 41/408 (10%), Positives = 129/408 (31%), Gaps = 24/408 (5%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + + + D+ ++ ++ S +
Sbjct: 1307 DSVERKVSEIKDILAQSPAAEPLKNIGYLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 1366
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 1367 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1426
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1427 EPNSTVEQSALMRDRVEDVMMER---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1483
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVP- 310
+ G + R +K V + +
Sbjct: 1484 CGTPPGASCSETECGGPNC---RTDEGEKKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSA 1540
Query: 311 ----ESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGT 366
E L + L+ + S+ + + + ++ D + + + +
Sbjct: 1541 LAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQIRNFLTQD 1600
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV----I 422
+ ++IE E+ L ++ P + + + ++ +L+++ +
Sbjct: 1601 SADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVEVILQHSAADIARA 1657
Query: 423 DHILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ +L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1658 EMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1705
>gi|114615466|ref|XP_001165362.1| PREDICTED: laminin, beta 1 isoform 1 [Pan troglodytes]
Length = 1677
Score = 45.4 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 41/408 (10%), Positives = 129/408 (31%), Gaps = 24/408 (5%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + + + D+ ++ ++ S +
Sbjct: 1221 DSVERKVSEIKDILAQSPAAEPLKNIGYLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 1280
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 1281 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1340
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1341 EPNSTVEQSALMRDRVEDVMMER---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1397
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVP- 310
+ G + R +K V + +
Sbjct: 1398 CGTPPGASCSETECGGPNC---RTDEGEKKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSA 1454
Query: 311 ----ESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGT 366
E L + L+ + S+ + + + ++ D + + + +
Sbjct: 1455 LAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQIRNFLTQD 1514
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV----I 422
+ ++IE E+ L ++ P + + + ++ +L+++ +
Sbjct: 1515 SADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVEVILQHSAADIARA 1571
Query: 423 DHILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ +L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1572 EMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1619
>gi|114615462|ref|XP_001165567.1| PREDICTED: laminin subunit beta-1 isoform 3 [Pan troglodytes]
Length = 1808
Score = 45.4 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 41/408 (10%), Positives = 129/408 (31%), Gaps = 24/408 (5%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDL-KLRLSYDILPQIEISSFDD 131
+ V +S+ + A P+ + + + D+ ++ ++ S +
Sbjct: 1243 DSVERKVSEIKDILAQSPAAEPLKNIGYLFEEAEKLIKDVTEMMAQVEVKLSDTTSQSNS 1302
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
D + + + +D + E+A+ + + + + +
Sbjct: 1303 TAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1362
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ + SA + ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1363 EPNSTVEQSALMRDRVEDVMMER---ESQFKEKQEEQARLLDELAGKLQSLDLSAAAEMT 1419
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVP- 310
+ G + R +K V + +
Sbjct: 1420 CGTPPGASCSETECGGPNC---RTDEGEKKCGGPGCGGLVTVAHNAWQKAMDLDQDVLSA 1476
Query: 311 ----ESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGT 366
E L + L+ + S+ + + + ++ D + + + +
Sbjct: 1477 LAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELRNLIKQIRNFLTQD 1536
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV----I 422
+ ++IE E+ L ++ P + + + ++ +L+++ +
Sbjct: 1537 SADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVESLSQVEVILQHSAADIARA 1593
Query: 423 DHILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+ +L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1594 EMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1641
>gi|291391313|ref|XP_002712162.1| PREDICTED: laminin, beta 1 [Oryctolagus cuniculus]
Length = 1744
Score = 45.4 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 41/409 (10%), Positives = 129/409 (31%), Gaps = 26/409 (6%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL-SYDILPQIEISSFDD 131
+ V + +++ + A P+ + ++ + T D+ R+ ++ S +
Sbjct: 1179 DSVEKKVNEIRDILAHSPAAEPLKNIGNLFEEAEKLTKDVIERMAQVEVKLSDTASQSNS 1238
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ + + + +D + E+A+ + + + + +
Sbjct: 1239 TTTQLESLQAEAENLDNTVKELAEQLEFIKNSDIRGALDSITKYFQMSLEAEERVNASTT 1298
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ SA ++++ + + E+ + + +LAGK L+ S +
Sbjct: 1299 DPHSTVEQSALTRERVEDLMMEQ---ESRFREKQEEQARLLDELAGKLQSLDLSAVAEMT 1355
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVP- 310
+ G + R +K V + +
Sbjct: 1356 CGTPPGASCSETECGGPNC---RTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVLSA 1412
Query: 311 ----ESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGT 366
E L + + + ++ + + ++ D + + + +
Sbjct: 1413 LAEVEQLSKMVSEAKQRADEAKQNAQGVLLKTNATKEKVDKSNEDLRNLIKQIRDFLTQD 1472
Query: 367 IGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID--- 423
+ ++IE E+ L ++ P + + + ++ +L+++ I + D
Sbjct: 1473 SADLDSIEAVANEV---LKMEMPSTPEQLQNLTEDIRERVESLSQVE-VILQQSAADIAR 1528
Query: 424 --HILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1529 AEMLLEEAKRASKSATDVKVTADTVKEALEEAEKAQIAAEKALKQADED 1577
>gi|170584498|ref|XP_001897036.1| Laminin-like protein C54D1.5 precursor [Brugia malayi]
gi|158595571|gb|EDP34114.1| Laminin-like protein C54D1.5 precursor, putative [Brugia malayi]
Length = 1634
Score = 45.4 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 39/410 (9%), Positives = 109/410 (26%), Gaps = 15/410 (3%)
Query: 51 LSHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAA-MRPSITINEGESDITSGLIEGT 109
+ +SI E + E I + L + E + + + +
Sbjct: 1204 RKLAEQQENRSIEIEALAEKIANTSKQALVEAKEVIFGGDATSKEIAIMMERLNATEKLL 1263
Query: 110 VDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI 169
+ + +T +Q+ E AK ++
Sbjct: 1264 NQTRKLAEEQLTEADRAYKAAAESLTVVEGLRLPNIDPQQIEEEAKRVAEDAKATADNAK 1323
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPED 229
+ ++ + + + + E+L + + +E +
Sbjct: 1324 EQAAANKELIDEAVRLIAEAKYELQRVQDQQ----KVSDELLADVDAAKARAMEAVSLAE 1379
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
+++ + LN + V + + ++ + + +
Sbjct: 1380 NTLTEAQHTLEILNDFQERVDATKSEAIEELRNLKEIEKEIALAEETTREAENAIGNAKN 1439
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
++ +I + E+ ++K ++ S + + ++
Sbjct: 1440 DARMAEKIALQAEKEAKSISKEAYELRNQTQYVRKTAEQLKSDANQLVSDVKETSTTMED 1499
Query: 350 YHMLA--------KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDH 401
Y A + + + N ++ ++ QL G + LD
Sbjct: 1500 YRRQASSDKARASEAVQKAQLAEKAAEDANKTISEAQDSLRSIINQLNSLDGVNIEELDE 1559
Query: 402 FQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
+K + EL DK + + + +I ++ T Q + E
Sbjct: 1560 LEKQLDQAEELLNSADLDKQVSLLKEQ-KI-EQDRTITQFRNEIDTLKDE 1607
>gi|255528524|ref|ZP_05395306.1| trigger factor domain protein [Clostridium carboxidivorans P7]
gi|296184876|ref|ZP_06853287.1| bacterial trigger factor protein (TF) [Clostridium carboxidivorans
P7]
gi|255507782|gb|EET84240.1| trigger factor domain protein [Clostridium carboxidivorans P7]
gi|296050658|gb|EFG90081.1| bacterial trigger factor protein (TF) [Clostridium carboxidivorans
P7]
Length = 156
Score = 45.4 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 281 IKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD 340
+++ +E +++ + ++D + T D+P+++++ E + +L+ + + Q
Sbjct: 1 MEEANELRTKREYEEAVIDAVCENATIDIPKAMIDKEIDNMLKDLEMRLKYQGLDLQTYY 60
Query: 341 SI----DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEK 396
+E+ +Y A++RV T + + I + +E TEEE+ + + ++ G +
Sbjct: 61 QYTNNTEEKVREYMKETAEKRVKTDLTIEEISKVEKVEATEEELLAKAAEMAKQYGGKDI 120
Query: 397 KMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ 430
+ + + L+ + +KVI ++ + +
Sbjct: 121 EKTSKLILD-SQKSYLKLGVINEKVIKMLVDNSK 153
>gi|308235221|ref|ZP_07665958.1| trigger factor [Gardnerella vaginalis ATCC 14018]
Length = 126
Score = 45.0 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 358 VLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIF 417
+ +VL + E ++ V++ ++ + L ++ + ++ + L +
Sbjct: 13 LRDQMVLDALAESLDVSVSQADVTNFLVSVAQQYGMDPSQFINAIVRN-GQLGSAVQEVA 71
Query: 418 EDK 420
K
Sbjct: 72 RSK 74
>gi|21595540|gb|AAH32276.1| Lamb1-1 protein [Mus musculus]
Length = 984
Score = 45.0 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 45/412 (10%), Positives = 129/412 (31%), Gaps = 32/412 (7%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL-SYDILPQIEISSFDD 131
+ V + +++ + A P+ + + + T D+ ++ ++ S +
Sbjct: 419 DSVEKKVNEIKDILAQSPAAEPLKNIGILFEEAEKLTKDVTEKMAQVEVKLTDTASQSNS 478
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ + + +D+ + E+A+ + + + + + +
Sbjct: 479 TAGELGALQAEAESLDKTVKELAEQLEFIKNSDIQGALDSITKYFQMSLEAEKRVNASTT 538
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ SA ++++ + E+ + + +LAGK L+ S +
Sbjct: 539 DPNSTVEQSALTRDRVEDLMLER---ESPFKEQQEEQARLLDELAGKLQSLDLSAVAQMT 595
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQ--------HSEFLVRQKVKRQILDYISN 303
+ G + G HS + R +L ++
Sbjct: 596 CGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVLSALAE 655
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
S + + Q + + N + VD +E+ + +
Sbjct: 656 VEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQI------RNFL 709
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
+ ++IE E+ L ++ P + + + ++ L+++ I + D
Sbjct: 710 TEDSADLDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVETLSQVE-VILQQSAAD 765
Query: 424 -----HILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 766 IARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 817
>gi|223994671|ref|XP_002287019.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978334|gb|EED96660.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 238
Score = 45.0 bits (104), Expect = 0.030, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
Query: 12 KRELDVIIPS--NRLTDSFNERIEDI---RSKANIKGFRPGKVPLSHIKSLYGKSILSET 66
+ E V I L I + +GFRPG +P + + +
Sbjct: 69 ETEFTVQIDGVEADLGKFGAAIYRKITSDAKQQQFQGFRPGTIPPHLL-----PTYKAFA 123
Query: 67 IDEIIKEIVPEILSKRDERA--AMRPSITINE 96
+DE +E + E + + D R A R + I +
Sbjct: 124 MDECAREAILEAMQQNDIRPFDAARSEMEIGQ 155
>gi|300715281|ref|YP_003740084.1| hypothetical protein EbC_06930 [Erwinia billingiae Eb661]
gi|299061117|emb|CAX58224.1| uncharacterized protein [Erwinia billingiae Eb661]
Length = 431
Score = 44.6 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 13/144 (9%), Positives = 41/144 (28%)
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE 344
+ + + + V + +L+ M + +
Sbjct: 1 MKNWRMLILGAALTASTAFAAPQVVDKVAAVVNNGVVLESDVDGMMQSVKSQAQQAGQQL 60
Query: 345 EDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQK 404
D + R++ +L + +++ I+VT+ ++ A+ + ++
Sbjct: 61 PDDKTLRHQIVERLVMDNILLQMAKQSGIQVTDAQLDGAIQNIAAQNKMTPDQLRSRLAY 120
Query: 405 YPNALAELRAPIFEDKVIDHILKS 428
R I + I + +
Sbjct: 121 DGMNYGTYREQIRREMTISEVRNN 144
>gi|188586891|ref|YP_001918436.1| trigger factor domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351578|gb|ACB85848.1| trigger factor domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 172
Score = 44.6 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 5/171 (2%)
Query: 263 VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGIL 322
++ S G + KQ Q + QIL+ I N +P L E N +L
Sbjct: 1 MKYKGYDISIKLGDYRKICKQIGCQEDYQNSQHQILESILNDSQIKIPRELTLQEANDML 60
Query: 323 QKVRFEMSSANQ----KSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEE 378
+ + ++ + Q D E + A+ R+ ++L I E+ +I T E
Sbjct: 61 KDMEKQIRYHGKNLFEYLQEQDKSINEFKEELAEQAEYRLKVELLLIKIAEQEDISATTE 120
Query: 379 EMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSV 429
E+ + Q + + A ++L I +K D +L
Sbjct: 121 ELDEEINQLARENQIPFEAAKEKV-TLQGAQSKLERKIMLEKTADFLLNLA 170
>gi|50294201|ref|XP_449512.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528826|emb|CAG62488.1| unnamed protein product [Candida glabrata]
Length = 475
Score = 44.2 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 63/194 (32%), Gaps = 26/194 (13%)
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHM 352
+Y + SL + IL + K +S + ++
Sbjct: 257 NCILWDTAGQERYRNAIMPSLYKKSNAIILSYDITD------KCSFKNSYEHWLVEAMGH 310
Query: 353 LAKRRV---LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP----GHEKKMLDHFQKY 405
A R + EVT E++ +A+ + R+ G+ + +F
Sbjct: 311 FAARDYEKARFYFIGNKTDLYKQREVTHEDVIAAIEEIESRYGLVIAGNFEVTCKNFDSL 370
Query: 406 PNALAELRAPI-----FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP---EKLLDKS 457
A+ + + +E+K + + + + D+ S+ + ++++ S
Sbjct: 371 NEAMNNITVDLVNNGCYEEKAEQELEGTAVLEE-----DEEMKESTTLNEQYDDEVVSTS 425
Query: 458 SKVETFQSEEAPSE 471
+ ++ + + E
Sbjct: 426 NDEDSGEDSDGSLE 439
>gi|189239180|ref|XP_001807607.1| PREDICTED: similar to CG6599 CG6599-PA, partial [Tribolium
castaneum]
Length = 1334
Score = 44.2 bits (102), Expect = 0.045, Method: Composition-based stats.
Identities = 24/200 (12%), Positives = 69/200 (34%), Gaps = 13/200 (6%)
Query: 276 LCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQK 335
+I + + + ++I + +P L L+ E ++
Sbjct: 520 DYHNEIIINGKTEINIHQTKEIHITPDEENLDQIPTKLSNEVAEKSLKSNTSEDQEEHKS 579
Query: 336 SQNVDSIDEEDLQYYHM-LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGH 394
++ E Q A + T IV E+ +++++ + + +
Sbjct: 580 LVVEAAVHEPPKQDVEKSEADKVSQTDIVEKESKIVQTSELEKDQVEENVQE-VKAAETQ 638
Query: 395 EKKMLD--HFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
+++++ +K + +L+ +K+ D + V+++ D S+ + ++
Sbjct: 639 VREIVEKVELKKNEKVIEQLQ-----EKITDESKEKGVSVEKEKDLD----KKSDETVDQ 689
Query: 453 LLDKSSKVETFQSEEAPSEI 472
+ VE + E E+
Sbjct: 690 TTKEEKSVEESKDENDLKEV 709
Score = 36.9 bits (83), Expect = 8.2, Method: Composition-based stats.
Identities = 30/240 (12%), Positives = 77/240 (32%), Gaps = 23/240 (9%)
Query: 246 IKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
E+ ++ + + + ++K + + +++ K ++
Sbjct: 530 KTEINIHQTKEIHITPDEENLDQIPTKLSNEVAEKSLKSNTSEDQEEHKSLVV----EAA 585
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLG 365
+ P+ VE + + + + D+ + + A + IV
Sbjct: 586 VHEPPKQDVEKSEADKVSQTDIVEKESKIVQTSELEKDQVEENVQEVKAAETQVREIVEK 645
Query: 366 TIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHI 425
+KN + E++Q + + +K D +K + + E+K ++
Sbjct: 646 VELKKNEKVI--EQLQEKITDESKEKGVSVEKEKDLDKKSDETVDQ---TTKEEKSVEES 700
Query: 426 LKSVQIVDRKVTFD-QLFDNSSE-------------SSPEKLLDKSSKVETFQSEEAPSE 471
+ + + T + ++ D + + EK L+K E EE SE
Sbjct: 701 KDENDLKEVETTQEFEIVDENEKGGKVVTEQKLEIVEEKEKSLEKPEDEEKQVIEEKSSE 760
>gi|315500015|ref|YP_004088818.1| ppic-type peptidyl-prolyl cis-trans isomerase [Asticcacaulis
excentricus CB 48]
gi|315418027|gb|ADU14667.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Asticcacaulis
excentricus CB 48]
Length = 423
Score = 44.2 bits (102), Expect = 0.051, Method: Composition-based stats.
Identities = 11/112 (9%), Positives = 39/112 (34%)
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTI 367
+ E +V + ++ + + + +++ + A R ++ +
Sbjct: 38 PLGEGVVALVNDKLISSYDLKQRMLLLIITSGVQVTQQNYAAFQQQALRALIDEHLQLAE 97
Query: 368 GEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
+ + V++EE+ + + + ++L ++ LR I +
Sbjct: 98 ADHFKLNVSDEEIDEEIANMAQQSGLSKDQLLAELKRAGIEAQTLRDQIKAE 149
>gi|148377858|ref|YP_001256734.1| hypothetical protein MAG_5950 [Mycoplasma agalactiae PG2]
gi|148291904|emb|CAL59295.1| Conserved hypothetical protein [Mycoplasma agalactiae PG2]
Length = 405
Score = 43.8 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 49/379 (12%), Positives = 124/379 (32%), Gaps = 43/379 (11%)
Query: 61 SILSETIDEIIKEIVPEI---LSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+ TI++ I + E+ L + D P I + G + V + + ++
Sbjct: 40 DVEVYTINKTINSKLDELFAQLRQEDPNFVAIPPIVVV-------DGPDKNGVKIDITIT 92
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+ +I + +L + V ++ +D +I + GD VT
Sbjct: 93 HYPSDEILKVDYSNLDIDFTYKPVPKEFLDSSFDKIIAEYPILTTADDAITEGDVVTWSA 152
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
T S+ N I+ + + + + ++G K +Q + A
Sbjct: 153 TRSLKNEIIGEDKEIRTRAEKTDQFSLNNE---IIGHKINEQFQTT------------AP 197
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDL---AVRLGFESESAMRGLCSQKIKQHSEFLVRQKVK 294
V +I ++ P P + ++ A+ + + ++ +++ +
Sbjct: 198 DGVTFFITILDIKRPAPTKLTDENIHLAMLPDVNFLNDFKEKIAKDTAKNNASNFLLRYY 257
Query: 295 RQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ------ 348
LD I +K V E + + N + + ++ + + + E +
Sbjct: 258 EIALDAIVSKNEIGVNEQNIFHSTNNHIDAILSNVADPTHRQMLYEQVVHETGEGLKILK 317
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ ++ +G I V++E+++ + + +
Sbjct: 318 RARENSIASYHLVLIDNILGGNEKISVSDEDIKREIEYMDYSMFPKPENLDK-------- 369
Query: 409 LAELRAPIFEDKVIDHILK 427
EL + I K+ +++K
Sbjct: 370 -EELFSIIMHQKMALYLMK 387
>gi|332283295|ref|YP_004415206.1| survival protein [Pusillimonas sp. T7-7]
gi|330427248|gb|AEC18582.1| survival protein [Pusillimonas sp. T7-7]
Length = 489
Score = 43.8 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 49/151 (32%), Gaps = 21/151 (13%)
Query: 316 NEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEV 375
+ N + + ++ N + +R++ + E+ I+V
Sbjct: 60 QQVNKEARLAQEQLQRQNIPVPDY--------AVLQKQVLQRMIMEELERQEAERLGIKV 111
Query: 376 TEEEMQSALYQQLGRFPGHEKKMLDHFQKY--------PNALAELRAPIFEDKVIDHILK 427
++ ++ A+ R K++ +K E+R + + +D
Sbjct: 112 SDAQVSQAVQTIAERNRITPKQLRAEIEKTGGKWDDYLQGLRQEVRTDLLRQRTVD---S 168
Query: 428 SVQIVDRKVTFDQLFDNSSESSPEKLLDKSS 458
++ I D +V D + +S+P
Sbjct: 169 TIVISDAEV--DAFLKSQGQSAPASAPTAPE 197
>gi|126367|sp|P02469|LAMB1_MOUSE RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin B1 chain;
AltName: Full=Laminin-1 subunit beta; AltName:
Full=Laminin-10 subunit beta; AltName: Full=Laminin-12
subunit beta; AltName: Full=Laminin-2 subunit beta;
AltName: Full=Laminin-6 subunit beta; AltName:
Full=Laminin-8 subunit beta; Flags: Precursor
Length = 1786
Score = 43.8 bits (101), Expect = 0.063, Method: Composition-based stats.
Identities = 45/412 (10%), Positives = 127/412 (30%), Gaps = 32/412 (7%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL-SYDILPQIEISSFDD 131
+ V + +++ + A P+ + + + T D+ ++ ++ S +
Sbjct: 1221 DSVEKKVNEIKDILAQSPAAEPLKNIGILFEEAEKLTKDVTEKMAQVEVKLTDTASQSNS 1280
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ + + +D+ + E+A+ + + + + + +
Sbjct: 1281 TAGELGALQAEAESLDKTVKELAEQLEFIKNSDIQGALDSITKYFQMSLEAEKRVNASTT 1340
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ SA ++++ + E+ + + +LAGK L+ S +
Sbjct: 1341 DPNSTVEQSALTRDRVEDLMLER---ESPFKEQQEEQARLLDELAGKLQSLDLSAAAQMT 1397
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQK--------IKQHSEFLVRQKVKRQILDYISN 303
+ G + G HS + R +L ++
Sbjct: 1398 CGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVLSALAE 1457
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
S + + Q + + N + VD +E+ + +
Sbjct: 1458 VEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQI------RNFL 1511
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
+ ++IE E+ L P + + + ++ L+++ I + D
Sbjct: 1512 TEDSADLDSIEAVANEV---LKSGNASTPQQLQNLTEDIRERVETLSQVE-VILQQSAAD 1567
Query: 424 -----HILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1568 IARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1619
>gi|293690|gb|AAA39407.1| laminin B1 [Mus musculus]
Length = 1834
Score = 43.8 bits (101), Expect = 0.064, Method: Composition-based stats.
Identities = 45/412 (10%), Positives = 127/412 (30%), Gaps = 32/412 (7%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL-SYDILPQIEISSFDD 131
+ V + +++ + A P+ + + + T D+ ++ ++ S +
Sbjct: 1269 DSVEKKVNEIKDILAQSPAAEPLKNIGILFEEAEKLTKDVTEKMAQVEVKLTDTASQSNS 1328
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ + + +D+ + E+A+ + + + + + +
Sbjct: 1329 TAGELGALQAEAESLDKTVKELAEQLEFIKNSDIQGALDSITKYFQMSLEAEKRVNASTT 1388
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ SA ++++ + E+ + + +LAGK L+ S +
Sbjct: 1389 DPNSTVEQSALTRDRVEDLMLER---ESPFKEQQEEQARLLDELAGKLQSLDLSAAAQMT 1445
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQK--------IKQHSEFLVRQKVKRQILDYISN 303
+ G + G HS + R +L ++
Sbjct: 1446 CGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVLSALAE 1505
Query: 304 KYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIV 363
S + + Q + + N + VD +E+ + +
Sbjct: 1506 VEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQI------RNFL 1559
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
+ ++IE E+ L P + + + ++ L+++ I + D
Sbjct: 1560 TEDSADLDSIEAVANEV---LKSGNASTPQQLQNLTEDIRERVETLSQVE-VILQQSAAD 1615
Query: 424 -----HILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 1616 IARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 1667
>gi|261338952|ref|ZP_05966810.1| hypothetical protein ENTCAN_05153 [Enterobacter cancerogenus ATCC
35316]
gi|288318779|gb|EFC57717.1| peptidylprolyl cis-trans isomerase SurA [Enterobacter cancerogenus
ATCC 35316]
Length = 428
Score = 43.8 bits (101), Expect = 0.066, Method: Composition-based stats.
Identities = 14/144 (9%), Positives = 47/144 (32%)
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE 344
+ + ++ S V + +L+ + + + +
Sbjct: 1 MKNWKTLLLGVAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMKSVKLNSGEAGQQL 60
Query: 345 EDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQK 404
D R++ ++ +G+K +++++E++ A+ + +M
Sbjct: 61 PDDATLRHQILERLIMDQIVLQMGQKMGVKISDEQLDQAIANIAKQNNMTPDQMRSRLAY 120
Query: 405 YPNALAELRAPIFEDKVIDHILKS 428
+ A R I ++ +I + +
Sbjct: 121 DGISYATYRNQIRKEMLISEVRNN 144
>gi|154816031|emb|CAO85709.1| putative trigger factor [Clostridium sp.]
Length = 124
Score = 43.5 bits (100), Expect = 0.076, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 311 ESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEK 370
E+ + N + K+R++ Q +S +E+ +Y A +RV T +VL + +
Sbjct: 3 ENEINNMLKDLEMKLRYQGIDLETYYQYTNSTEEKVREYMKEAATKRVKTDLVLAEVAKA 62
Query: 371 NNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ 430
+E T+EE+ + ++ E + A L+A + +KV+ I+ + +
Sbjct: 63 EKLEATDEEIMDRAKEMAKQYGSGELEKTAKLLADSQN-ALLKADVINEKVVKLIVDNSK 121
Query: 431 IVD 433
++
Sbjct: 122 EIE 124
>gi|302343060|ref|YP_003807589.1| SurA domain protein [Desulfarculus baarsii DSM 2075]
gi|301639673|gb|ADK84995.1| SurA domain protein [Desulfarculus baarsii DSM 2075]
Length = 327
Score = 43.5 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 344 EEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ 403
+A ++ + E+ I V+EEE+ L + +++ +
Sbjct: 69 MPPAAEVRYMALNSLIDEKLFNKEVERLKISVSEEEVSMFLERLKAANNMTQQEFIARLN 128
Query: 404 KY----PNALAELRAPIFEDKVIDH-ILKSVQIVDRKVT 437
+ ++R + K+I++ + V I D++V
Sbjct: 129 ETGMTPEEYREKVRNDQLKRKLINYEVKNKVVISDKEVD 167
>gi|152996520|ref|YP_001341355.1| FKBP-type peptidylprolyl isomerase [Marinomonas sp. MWYL1]
gi|150837444|gb|ABR71420.1| peptidylprolyl isomerase FKBP-type [Marinomonas sp. MWYL1]
Length = 243
Score = 43.5 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 66/155 (42%)
Query: 95 NEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIA 154
+++ + E + ++L + IE D E + ++ +++
Sbjct: 70 KRQDAEEKALQFESSRRVELEKIVKLDEVIERHRSLDDFEAILNKEKERLVNEKNKYDLS 129
Query: 155 KNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGL 214
N + + GD+V +D+ +D + + S + ++GS + + +G
Sbjct: 130 VANADWYSVDKLVSKGDRVLIDFVGEIDGIPFDGGSTEGHLLVIGSNTMIPGFEDGFIGK 189
Query: 215 KTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEV 249
K GD+ I+ FP+D+ +DL GKKV+ I +V
Sbjct: 190 KAGDETVIDLKFPDDYGAEDLKGKKVQFKVKIHKV 224
>gi|327479275|gb|AEA82585.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas stutzeri DSM
4166]
Length = 435
Score = 43.5 bits (100), Expect = 0.085, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 50/125 (40%), Gaps = 5/125 (4%)
Query: 317 EYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVT 376
+ + I+Q + +++ + + R+++ + IGE++ + ++
Sbjct: 43 DNDVIMQSQLDQRIQEVRQTIEKRGAEVPPNEVLQQQVLERLISENLQLQIGERSGVRIS 102
Query: 377 EEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID-----HILKSVQI 431
+EE+ A+ R ++ + + + R I + +I + + +Q+
Sbjct: 103 DEELNQAMATIAQRNNMTPEQFREALARDGLSPETAREQIRREMIISRVRQRRVAERIQV 162
Query: 432 VDRKV 436
+++V
Sbjct: 163 SEQEV 167
>gi|302383690|ref|YP_003819513.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brevundimonas
subvibrioides ATCC 15264]
gi|302194318|gb|ADL01890.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Brevundimonas
subvibrioides ATCC 15264]
Length = 450
Score = 43.1 bits (99), Expect = 0.092, Method: Composition-based stats.
Identities = 10/115 (8%), Positives = 36/115 (31%), Gaps = 1/115 (0%)
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLG 365
F + + +V + ++ + + EE++ A + ++ +
Sbjct: 57 EFKMADGIVATVNDQVITGFDLRQRMLTTIAMSQVQPTEENIPAIQQQALQGLIEERLQA 116
Query: 366 TIGEKNN-IEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
K +++T+ E+ + + + ++ LR + +
Sbjct: 117 AEIAKFETLKITDAEVDEEIARMAEEAGTTPQAYVEFLTSGGIRAENLREQLRTE 171
>gi|237803361|ref|ZP_04590946.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331025342|gb|EGI05398.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 440
Score = 43.1 bits (99), Expect = 0.096, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 54/161 (33%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + I++ + Q++ +
Sbjct: 18 LLSGAVHAAVQPLDSVAAIVDNDVIMKSQVDQRVHEVQQTIAKRGSGVPPAEALQKQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDDELNQAIASIAQRNNMSVEQFRAALIHDGVSYDDAREQV 137
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 138 RREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEE 178
>gi|58585025|ref|YP_198598.1| membrane protease subunit stomatin/prohibitin-like protein
[Wolbachia endosymbiont strain TRS of Brugia malayi]
gi|58419341|gb|AAW71356.1| Membrane protease subunit, stomatin/prohibitin homolog [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 345
Score = 43.1 bits (99), Expect = 0.100, Method: Composition-based stats.
Identities = 27/309 (8%), Positives = 79/309 (25%), Gaps = 18/309 (5%)
Query: 142 DEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSA 201
+E + + ++EI + + + + S++ ++ G
Sbjct: 22 NEDILSKAISEIRYFFIGLTRNSGKKPYFIIFIILLFYVCTGFYIVHPSEEGIELTFGKY 81
Query: 202 DL---------FSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSP 252
F + + + E + G+ V L V
Sbjct: 82 SNTETPGLRYHFPYPIGKVFKVNVKEVNREEIGISSPYGRDTDRGEGVMLTGDENIVNVN 141
Query: 253 LPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPES 312
V A F+ G + + + + K +
Sbjct: 142 FEVQWRVRDAKDYLFKVRDYKPGFSVKNAAESAMREIIGKNTISFALEGQGRAEISRDTR 201
Query: 313 LVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR--------RVLTGIVL 364
++ + Q +S +K + + A + I+
Sbjct: 202 ILLQQILDGYQMGIEILSVQMKKIDPPEKVISSFRDVQSARADKERTINEAYAYSNDIIP 261
Query: 365 GTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDH 424
GE I++ E ++ + + + + +++ P+ + + + +
Sbjct: 262 RAKGEAIKIKLDAEAYENEIINEAKGNANRFLSLYEEYKQNPSLVKNRIYLETMENIFNK 321
Query: 425 ILKSVQIVD 433
+ V + +
Sbjct: 322 V-DKVVVTE 329
>gi|225571931|ref|ZP_03780801.1| hypothetical protein CLOHYLEM_07905 [Clostridium hylemonae DSM
15053]
gi|225159413|gb|EEG72032.1| hypothetical protein CLOHYLEM_07905 [Clostridium hylemonae DSM
15053]
Length = 174
Score = 43.1 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 65/173 (37%), Gaps = 4/173 (2%)
Query: 172 KVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
V +DY S D +++ S + + VGS + + L+G GD IE F +D +
Sbjct: 1 VVIIDYAASADGQPIQNGSGSDYELTVGSGSFYEGFDDNLIGHNAGDTLNIEHTFADDFN 60
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLA--VRLGFESESAMRGLCSQKIKQHSEFLV 289
K LAGKK ++ ++K V + ++ + ++ R + ++++++ +
Sbjct: 61 NKTLAGKKASIDVTVKAVREKELPELTDEFVRTISQKSDTVEEYRKEVRKLLEENNKEYI 120
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI 342
+ ++ + V + + A+ +
Sbjct: 121 QSELMDSAWKQVLENTE--VKKYPKDRLKEEEQSFYDHYEDGADMYEMDFPEF 171
>gi|331017629|gb|EGH97685.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 440
Score = 43.1 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 15/146 (10%), Positives = 51/146 (34%), Gaps = 5/146 (3%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAADLQPQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYEDAREQV 137
Query: 417 FEDKVID-----HILKSVQIVDRKVT 437
+ +I + + +Q+ +++V
Sbjct: 138 RREMIISRVRQRRVAERIQVSEQEVK 163
>gi|156405274|ref|XP_001640657.1| predicted protein [Nematostella vectensis]
gi|156227792|gb|EDO48594.1| predicted protein [Nematostella vectensis]
Length = 974
Score = 43.1 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 29/227 (12%), Positives = 92/227 (40%), Gaps = 6/227 (2%)
Query: 249 VFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFD 308
V SP P+ + + + + + S + + + + + + K +
Sbjct: 175 VNSPEPLSIGDKITIGVAVNSGHPEFEYVLESMSKPKKRQAEPSTASEAISNKQRKVLSE 234
Query: 309 VPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIG 368
S V E + + + K N + ++E + + +R + + +
Sbjct: 235 SDRSNVHRETPSCSHDEKIKAAEQKIKILNNNLEEKEKVYEKVLEELKRKESVMESELLR 294
Query: 369 EKNNIEVTEEEMQSALYQQLGRFPGHEKKML-DHFQKYPNALAELRAPIFEDKVIDHILK 427
+K ++E +E+++ +L + L + P +++ML + + L + + + E+K+ + + +
Sbjct: 295 QKASLENEKEDLERSLKELLEKSPKEKEEMLSEELETQKELLIKEKHKV-EEKLQNELNQ 353
Query: 428 SVQIVDRKVTFDQLFDNSSESSP---EKLLDKSSKVETFQSEEAPSE 471
+++ D+++ ++L ++ EK + + ++ +E
Sbjct: 354 KLELKDKELE-EKLLAQKADLEKVIAEKEAQQKELQQELSIHKSATE 399
>gi|330961060|gb|EGH61320.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. maculicola str. ES4326]
Length = 440
Score = 43.1 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 16/146 (10%), Positives = 50/146 (34%), Gaps = 5/146 (3%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQKQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE+ I V++EE+ A+ R + + + R +
Sbjct: 78 RLILENLQLQMGERAGIRVSDEELNQAIGTIAQRNNMSVDQFRAALAHDGLSYDDAREQV 137
Query: 417 FEDKVID-----HILKSVQIVDRKVT 437
+ +I + + +Q+ +++V
Sbjct: 138 RREMIISRVRQRRVAERIQVSEQEVK 163
>gi|228477887|ref|ZP_04062501.1| protease maturation protein [Streptococcus salivarius SK126]
gi|228250377|gb|EEK09617.1| protease maturation protein [Streptococcus salivarius SK126]
Length = 380
Score = 42.7 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVI 422
+ + ++ +V++E++ A Q ++ ++L + + R I K++
Sbjct: 134 LQKALEKEYGSKVSKEDVDKAYKQASEQYGDQFSQVLAAYGQTEE---SYRTQIRTQKLV 190
Query: 423 DHILKSVQIVD-RKVTFDQLFDNSSESSPEKLLDKSSKV-ETFQSEEAPSE 471
++ + D + + +DN + ++ +++ + K EA +E
Sbjct: 191 EYAVNQAAQKDLTEANYKAAYDNYTPNTEVQVVSTTDKAVADKVDSEAKAE 241
>gi|302130724|ref|ZP_07256714.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato NCPPB 1108]
Length = 440
Score = 42.7 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 15/146 (10%), Positives = 51/146 (34%), Gaps = 5/146 (3%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAADLQPQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYEDAREQV 137
Query: 417 FEDKVID-----HILKSVQIVDRKVT 437
+ +I + + +Q+ +++V
Sbjct: 138 RREMIISRVRQRRVAERIQVSEQEVK 163
>gi|330878394|gb|EGH12543.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330963847|gb|EGH64107.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 440
Score = 42.7 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 15/146 (10%), Positives = 50/146 (34%), Gaps = 5/146 (3%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAADLQPQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R + + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVDQFRAALAHDGLSYNDAREQV 137
Query: 417 FEDKVID-----HILKSVQIVDRKVT 437
+ +I + + +Q+ +++V
Sbjct: 138 RREMIISRVRQRRVAERIQVSEQEVK 163
>gi|50122778|ref|YP_051945.1| peptidyl-prolyl cis-trans isomerase SurA [Pectobacterium
atrosepticum SCRI1043]
gi|81693097|sp|Q6D0E2|SURA_ERWCT RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|49613304|emb|CAG76755.1| survival protein [Pectobacterium atrosepticum SCRI1043]
Length = 431
Score = 42.7 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 56/144 (38%), Gaps = 15/144 (10%)
Query: 314 VENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNI 373
+E++ N +LQ V+ A Q+ + R++ ++ + +K I
Sbjct: 38 LESDVNSLLQSVKLNAQQAGQQLPD--------DATLRHQITDRLIMDNIILQMAQKMGI 89
Query: 374 EVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS----- 428
+VT+E++ A+ + ++ R+ I ++ +I + +
Sbjct: 90 QVTDEQLDQAITNIAAQNRMSIDQLKSQLANEGLNYNTYRSQIRKEMLISEVRNNEVRRR 149
Query: 429 VQIVDRKVTF--DQLFDNSSESSP 450
V ++ ++V Q+ + + E+
Sbjct: 150 VTVLPQEVDTLAKQIANQTGENDE 173
>gi|313678747|ref|YP_004056487.1| hypothetical protein MBOVPG45_0694 [Mycoplasma bovis PG45]
gi|312950382|gb|ADR24977.1| conserved hypothetical protein [Mycoplasma bovis PG45]
Length = 405
Score = 42.7 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 58/350 (16%), Positives = 120/350 (34%), Gaps = 36/350 (10%)
Query: 60 KSILSETIDEIIKEIVPEILSKRDER----AAMRPSITINEGESDITSGLIEGTVDLKLR 115
K + TID+ I E V ++L++ A+ P I I G + V + +
Sbjct: 39 KDVEHYTIDKTIDEKVNKMLNELRNEDSNFVAIPPIIVI--------DGPSKNGVKIDIS 90
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV 175
++Y +I + +L + V ++ +D ++ + D VT
Sbjct: 91 VTYYSSTEISKVDYSNLNLDFTYRPVPKEFLDSSFEKMISEYPILYSVDEAISENDVVTW 150
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
S +N IL + + + + + ++G K +Q E
Sbjct: 151 SAIRSSNNKILGEDKEVRTKATKTDSFSINNE---IIGHKVNEQFETT------------ 195
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDL---AVRLGFESESAMRGLCSQKIKQHSEFLVRQK 292
A V +I EV P+P +N++ A+ S + + ++ +++ K
Sbjct: 196 APDGVSFQITINEVKRPVPTYLNDENIHLAMLPNVNSLNDFKEKIARDTAKNNASNFLLK 255
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEE------D 346
LD I +K + + + + + + + + + + I E
Sbjct: 256 YYEMALDAIVSKNEISINDQNIFHSTSNHIDAILANIDDEIHRRMIFEQILNETGEGLKI 315
Query: 347 LQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEK 396
L+ + ++ +G K NI VTEE++Q L
Sbjct: 316 LERARENSITSYYLVLIDNILGGKENINVTEEDIQKELEYINHSMFPRPN 365
>gi|28867781|ref|NP_790400.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato str. DC3000]
gi|81732691|sp|Q88A44|SURA_PSESM RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|28851016|gb|AAO54095.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 428
Score = 42.7 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 54/161 (33%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++
Sbjct: 6 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAADLQPQVLD 65
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 66 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYEDAREQV 125
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 126 RREMIISRVRQRRVAERIQVSEQEVKNFLASDQGKAQLSEE 166
>gi|301382733|ref|ZP_07231151.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato Max13]
gi|302063472|ref|ZP_07255013.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato K40]
Length = 440
Score = 42.7 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 15/146 (10%), Positives = 51/146 (34%), Gaps = 5/146 (3%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMGQRVREVQQTIAKRGSGVPPAADLQPQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYEDAREQV 137
Query: 417 FEDKVID-----HILKSVQIVDRKVT 437
+ +I + + +Q+ +++V
Sbjct: 138 RREMIISRVRQRRVAERIQVSEQEVK 163
>gi|295108815|emb|CBL22768.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Ruminococcus obeum A2-162]
Length = 510
Score = 42.7 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 76/194 (39%), Gaps = 13/194 (6%)
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
+E+ E + + + D + + +D I+ + + ++ E++
Sbjct: 317 NELYTETTDKWMDEADIKV--EKKVLKTLKVTDNHKFTIQTAAEDTTDEAAEVTEAPEVT 374
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES---------EIGDKVTVDYT 178
D T ++ E + ++ E A EV E S + GD V +DY
Sbjct: 375 EAADATETPEVTEAADATETPEVTEAADATATPEVTEAPSYDTDSSLEVKDGDTVNIDYV 434
Query: 179 VSVDNVILEDQS--KKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA 236
+D V + S ++GS E L+G GD+ E+ FP+D+ DLA
Sbjct: 435 GKIDGVAFDGGSTDGNGTDLVIGSGSYIDNFEEQLIGAHPGDKVEVTVTFPDDYQATDLA 494
Query: 237 GKKVRLNFSIKEVF 250
GK+ + ++ ++
Sbjct: 495 GKEAVFDVTVNGIY 508
>gi|322372370|ref|ZP_08046906.1| foldase protein PrsA [Streptococcus sp. C150]
gi|321277412|gb|EFX54481.1| foldase protein PrsA [Streptococcus sp. C150]
Length = 380
Score = 42.7 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVI 422
+ + ++ +V++E++ A Q ++ ++L + + R I K++
Sbjct: 134 LQKALEKEYGSKVSKEDVDKAYKQASEQYGEQFSQVLAAYGQTEE---SYRTQIRTQKLV 190
Query: 423 DHILKSVQIVD-RKVTFDQLFDNSSESSPEKLLDKSSKV-ETFQSEEAPSE 471
++ + D + + +DN + ++ +++ + K EA +E
Sbjct: 191 EYAVNQAAQKDLTEANYKAAYDNYTPNTEVQVVSTTDKAVADKVDSEAKAE 241
>gi|194763773|ref|XP_001964007.1| GF21330 [Drosophila ananassae]
gi|190618932|gb|EDV34456.1| GF21330 [Drosophila ananassae]
Length = 3624
Score = 42.7 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 38/413 (9%), Positives = 117/413 (28%), Gaps = 21/413 (5%)
Query: 66 TIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIE 125
+D++++E +L + A +NE + + + S +
Sbjct: 1182 AVDDVLQEASS-VLKDEEIELA------VNEVVQGVLNNEKKSQEKEPQSQSQQEDVNVS 1234
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ + +L + + + + + + + +V
Sbjct: 1235 LLNSKNLLNNNNNNNNNNSPSLTTPETETETGTGAATEAEPEQEPEVNANEIVSTVPKDQ 1294
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ + A+ + T + + A K+ N
Sbjct: 1295 EGETKTEPKAETKAEAEAETAALAKPSPATTNPNTTATSTPEASNQKTEEAANKLNNNEK 1354
Query: 246 IKEVFSPLPVVVNNDLAVRLGFESESAMRGLCS---QKIKQHSEFLVRQKVKRQILDYIS 302
+ E+ + + E++ ++ + + +++
Sbjct: 1355 LVEIGAGSSPETETEKEKDTDLETKPETPTEVLAKPEEKPEAVAEKESEHTAEDLVELAV 1414
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD--SIDEEDLQYYHMLAKRRVLT 360
+ + +++ + + A Q+ + + + + AK
Sbjct: 1415 RDIVEQLIDKVIDATEAETAAETQEARPKAETDGQSPPPTKTETNNNELPKVEAKP---- 1470
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
E+ E+ +E +++AL E+ + P ++ + E+K
Sbjct: 1471 ---EEESPEQVAEEIVQEVVEAALEGLAQEAAKPEEAAPKTPEASPPKEEPVKDLLLEEK 1527
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
V +V +++ ++ + E+ + + +T Q+ AP E S
Sbjct: 1528 VKPEAAPEAPATKEQV--EEIVNDVVNTLVEETVKAVASEQTTQTSPAPKEQS 1578
>gi|118082115|ref|XP_415943.2| PREDICTED: similar to laminin, beta 1 [Gallus gallus]
Length = 2147
Score = 42.3 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 66/194 (34%), Gaps = 22/194 (11%)
Query: 284 HSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID 343
H+ + R IL ++ S + + Q + + N + VD +
Sbjct: 1799 HNAWQKAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQEVLLKTNATKEQVDRSN 1858
Query: 344 EEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ 403
E+ + ++ + ++IE E+ L ++ P + + + +
Sbjct: 1859 EDLRNLIKQI------RDFLMQDSADLDSIEAVANEV---LNMEMPSTPEQLQALTEDIR 1909
Query: 404 KYPNALAELRAPIFEDKV-----IDHILKSVQI-----VDRKVTFDQLFDNSSESSPEKL 453
+ +L+++ I + + +L+ + D KVT D ++ EK
Sbjct: 1910 ERVESLSDVE-VILQQSAGDIARAEMLLEEAKKASKGAKDVKVTAD--MVKAALEEAEKA 1966
Query: 454 LDKSSKVETFQSEE 467
D + K E+
Sbjct: 1967 QDAAEKAIKQADED 1980
>gi|302416015|ref|XP_003005839.1| SpaA [Verticillium albo-atrum VaMs.102]
gi|261355255|gb|EEY17683.1| SpaA [Verticillium albo-atrum VaMs.102]
Length = 870
Score = 42.3 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 40/362 (11%), Positives = 101/362 (27%), Gaps = 29/362 (8%)
Query: 115 RLSYDILPQIEISSFDDLQ---VTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD 171
+S + P + +Q ++ + + + V +
Sbjct: 196 NMSMRVPPSRSGTPLSGMQNGFPPRNQSRMRRPSDASSIRGAMPPQDPYGVPPSPGLPNG 255
Query: 172 KVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
+ + + D + E + +
Sbjct: 256 DYGRPMQKQFQSNTIVPNKSTM---VEEDDDGSPDNDEDRDAFGLDKNGNRTSDKSQRTT 312
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ 291
A KK+ + + + + + R E + G S+ + E
Sbjct: 313 ETSEADKKMLEEYRNQVKDLTERLDIMEEAVKRKDDELAGVLDGERSRASANNMEKQEWT 372
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
++ + + +++ + +SL + +V ++++ D+ D
Sbjct: 373 DLRTNLENQLAD--AQGLNDSLRQELDRAQGDQVHARNDYDRLRNEHDRIQDDMDRIRDG 430
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPG--HEKKMLDHFQKYPNAL 409
+ R L + + N+ V MQ++ P E + L + L
Sbjct: 431 HANEIRDLRDQLEEMRQKSMNVNV----MQASTSSNAPSDPELIQENQQLRQALEEQQQL 486
Query: 410 AELRAPIF------------EDKVI---DHILKSVQIVDRKVTFDQLFDNSSESSPEKLL 454
RA +K + ++K V + +++ D+L + PEK++
Sbjct: 487 RNFRASSLGLTIDQDAGKYVREKGFTEENGLVKDVHVTKFQISIDELLQRARADDPEKII 546
Query: 455 DK 456
D
Sbjct: 547 DA 548
>gi|156096855|ref|XP_001614461.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148803335|gb|EDL44734.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 2419
Score = 42.3 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 67/234 (28%), Gaps = 12/234 (5%)
Query: 46 PGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGL 105
G PL G+++ E +DE + E+V E + + + A + G
Sbjct: 476 KGGAPL------VGEAV-DEAVDEAVDEVVDEAVDEAVDEAVNDADKALERGRGHAHPQS 528
Query: 106 IEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEI---DRQMAEIAKNNVAFEV 162
+ T + + + + +++ + E AF+
Sbjct: 529 EDETHPFNVEALKKTSSMNFSFEEESVNMDVYATNYITEDVLKGMLNIMEERITFDAFKN 588
Query: 163 KETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSE--TTEILVGLKTGDQK 220
+++ + + + D S K GS + K ++K
Sbjct: 589 ASSDANYQMSSSNVELLYNAILRHRDGSAKGELMADGSHPSDEGNLQKKCTSSEKKKEEK 648
Query: 221 EIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMR 274
I + + I+ N +K V +++ + E +
Sbjct: 649 YITLADIKSYVIQRNEKNSNYFNEIMKMVVHFNNMLLLMRSNKGVEVEDKLLFE 702
>gi|213967673|ref|ZP_03395820.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato T1]
gi|213927449|gb|EEB60997.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tomato T1]
Length = 428
Score = 42.3 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 15/146 (10%), Positives = 51/146 (34%), Gaps = 5/146 (3%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++
Sbjct: 6 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMGQRVREVQQTIAKRGSGVPPAADLQPQVLD 65
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 66 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYEDAREQV 125
Query: 417 FEDKVID-----HILKSVQIVDRKVT 437
+ +I + + +Q+ +++V
Sbjct: 126 RREMIISRVRQRRVAERIQVSEQEVK 151
>gi|330881719|gb|EGH15868.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. glycinea str. race 4]
Length = 256
Score = 42.3 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 20 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 79
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 80 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 139
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 140 RREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEK 180
>gi|12851534|dbj|BAB29079.1| unnamed protein product [Mus musculus]
Length = 911
Score = 42.3 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 38/406 (9%), Positives = 128/406 (31%), Gaps = 20/406 (4%)
Query: 73 EIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL-SYDILPQIEISSFDD 131
+ V + +++ + A P+ + + + T D+ ++ ++ S +
Sbjct: 346 DSVEKKVNEIKDILAQSPAAEPLKNIGILFEEAEKLTKDVTEKMAQVEVKLTDTASQSNS 405
Query: 132 LQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSK 191
+ + + +D+ + E+A+ + + + + + +
Sbjct: 406 TAGELGALQAEAESLDKTVKELAEQLEFIKNSDIQGALDSITKYFQMSLEAEKRVNASTT 465
Query: 192 KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFS 251
+ SA ++++ + E+ + + +LAGK L+ S +
Sbjct: 466 DPNSTVEQSALTRDRVEDLMLER---ESPFKEQQEEQARLLDELAGKLQSLDLSAVAQMT 522
Query: 252 PLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSE--FLVRQKVKRQILDYISNKYTFDV 309
+ G + G + ++ +
Sbjct: 523 CGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVLSALAE 582
Query: 310 PESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGE 369
E L + ++ + ++ + + + ++ D + + + + +
Sbjct: 583 VEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQIRNFLTEDSAD 642
Query: 370 KNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID-----H 424
++IE E+ L ++ P + + + ++ L+++ I + D
Sbjct: 643 LDSIEAVANEV---LKMEMPSTPQQLQNLTEDIRERVETLSQVE-VILQQSAADIARAEL 698
Query: 425 ILKSVQ-----IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
+L+ + D KVT D + + E+ ++ + + + +
Sbjct: 699 LLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADED 744
>gi|198430722|ref|XP_002120796.1| PREDICTED: similar to neurobeachin [Ciona intestinalis]
Length = 2789
Score = 42.3 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 46/427 (10%), Positives = 117/427 (27%), Gaps = 32/427 (7%)
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS--- 117
SIL + + I+ ++ + ++ + + + + + + + +
Sbjct: 669 SILEDELQSILGYLLTMH-EDENILDVLQLLVAMVSEQGGAVTPVFDRRNGIVVIFKLLG 727
Query: 118 -----YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDK 172
+ ++ F + EV E + + + E T +
Sbjct: 728 SRSENVRVHALKLLAYFLKNLSLKRKNEVMESQSLFMLVGERLLLYSDEFSLTAYNAMYE 787
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
V V+ + + I G+ + IL + E++ F D +
Sbjct: 788 VLVEEPSTQV-LQKTHAEPSANTLI-GNPVMMKVIATILRQCSSSHTMELKVTFLNDLLV 845
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQH--SEFLVR 290
+ R + V+ + + + + + + + H
Sbjct: 846 LFQMSRDNRRILLQQSVWQDWMLELGHLRPNTVQERDCQELIFSIFKVLLYHAIKLEWGG 905
Query: 291 QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYY 350
+V L + K + + + +E Y + + +
Sbjct: 906 WRVWVDTLAIVHAKVSLESHKEYMEKMYEEYQNAEKVTKKRGGVSAITGAKNPDASQPKV 965
Query: 351 HMLAKR---RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+ + + +V+ + + I V E E K
Sbjct: 966 QEIVEDDPSSLSPSVVVESNMNQIQIVVEEATASDPPADVAEDEGKEEA-------KGEK 1018
Query: 408 ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEE 467
+ ++ A E K +I D + + L + + E+ + ++E
Sbjct: 1019 EVEDVEADSDEQK--------EKIKDDECDKESLKEKPESAGEEQRSKDDKNEDETAADE 1070
Query: 468 APS-EIS 473
PS EIS
Sbjct: 1071 EPSNEIS 1077
>gi|313904520|ref|ZP_07837896.1| peptidylprolyl isomerase FKBP-type [Eubacterium cellulosolvens 6]
gi|313470662|gb|EFR65988.1| peptidylprolyl isomerase FKBP-type [Eubacterium cellulosolvens 6]
Length = 193
Score = 42.3 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 173 VTVDYTVSVDNVILEDQSKKNV--QFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
V +DY +D V + K + +GS + + ++G K G+ ++ FPED+
Sbjct: 112 VDIDYVGKIDGVAFDGGDTKGAGARLRIGSGQYIAGFEDQIIGHKPGETFDVVVTFPEDY 171
Query: 231 SIKDLAGKKVRLNFSIKEVF 250
+LAGK+ ++ ++
Sbjct: 172 GTAELAGKEAVFTTTLNGIY 191
>gi|331011659|gb|EGH91715.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 440
Score = 41.9 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 137
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 138 RREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEE 178
>gi|320326011|gb|EFW82069.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
glycinea str. B076]
gi|330985794|gb|EGH83897.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 440
Score = 41.9 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 137
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 138 RREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEE 178
>gi|257483108|ref|ZP_05637149.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 442
Score = 41.9 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 20 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 79
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 80 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 139
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 140 RREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEE 180
>gi|330891199|gb|EGH23860.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
mori str. 301020]
Length = 440
Score = 41.9 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 137
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 138 RREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEE 178
>gi|126326759|ref|XP_001378822.1| PREDICTED: similar to Ab2-131 [Monodelphis domestica]
Length = 1469
Score = 41.9 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 32/346 (9%), Positives = 96/346 (27%), Gaps = 10/346 (2%)
Query: 88 MRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEID 147
++P++ I ++S + + L I P I++ + Q +++
Sbjct: 490 LQPNLPIGFENEVLSSKPVINHLFLFKFEEPRIYPHKGINNPHETNENQSEIKINYFLTV 549
Query: 148 RQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSET 207
+ + ++ I + V + K + L S+
Sbjct: 550 NVILKSLFYPLSHLPARHSMSIRAVNCLLLLSIVFIPHNTLERKDRMSQWYELQQLDSKF 609
Query: 208 TEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGF 267
E + L D +E ++ ++ S V + +D R
Sbjct: 610 LEQVHQL-YDDSFPMEIRQYLAPWLEKQDWDHAAIDVSFATVCFHELLSQLDDQYSRFSL 668
Query: 268 ESESAMRGLCSQKIKQHSEFLVRQ-KVKRQILDYISNKYTFDVPESL-VENEYNGILQKV 325
E+ ++ + + + I+ + + + + + G +Q
Sbjct: 669 ENNFLLQHNIRKSKRNLQDNFQEDPIQMSMIISNCLKEERKILAAAQQFDQAHMGNIQNA 728
Query: 326 RFEMSSANQKSQNVDSIDEEDLQYYHMLA------KRRVLTGIVLGTIGEKNNIEVTEEE 379
Q + D + +R + + E +
Sbjct: 729 VMPGKQKEIGLQVKNVKDRVMDIEQEIKVLEDLQDERDFKIKTLSNREHDHFGTATNEHK 788
Query: 380 MQSA-LYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDH 424
+ + + K+++ + NA ++ + +++++
Sbjct: 789 QEKMLIQKMYLMLDQKRKEVVQKIIELLNATELIQNVLLNEELVEW 834
>gi|289627686|ref|ZP_06460640.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289649005|ref|ZP_06480348.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330868493|gb|EGH03202.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 440
Score = 41.9 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 137
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 138 RREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEE 178
>gi|66047852|ref|YP_237693.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. syringae B728a]
gi|63258559|gb|AAY39655.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. syringae B728a]
gi|330970840|gb|EGH70906.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. aceris str. M302273PT]
Length = 442
Score = 41.9 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 16/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 20 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 79
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V++EE+ A+ R ++ + + R +
Sbjct: 80 RLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 139
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 140 RREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSEE 180
>gi|298485302|ref|ZP_07003394.1| Survival protein surA precursor (Peptidyl-prolyl cis-trans
isomerase surA) [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298160152|gb|EFI01181.1| Survival protein surA precursor (Peptidyl-prolyl cis-trans
isomerase surA) [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 428
Score = 41.9 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 6 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 65
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 66 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 125
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 126 RREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEE 166
>gi|330980962|gb|EGH79065.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. aptata str. DSM 50252]
Length = 442
Score = 41.9 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 16/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 20 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 79
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V++EE+ A+ R ++ + + R +
Sbjct: 80 RLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 139
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 140 RREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSEE 180
>gi|289676168|ref|ZP_06497058.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. syringae FF5]
gi|330938460|gb|EGH42067.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. pisi str. 1704B]
Length = 440
Score = 41.9 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 16/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V++EE+ A+ R ++ + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 137
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 138 RREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSEE 178
>gi|325118201|emb|CBZ53752.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 2995
Score = 41.9 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 73/251 (29%), Gaps = 8/251 (3%)
Query: 221 EIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQK 280
E E+ ++ K+ + ++V S ND ++ + + + +K
Sbjct: 580 EKEKVASDEEEKVASDEKEKVASDEKEKVASDEEEKARNDEKEKVASDEKEKVASDEKEK 639
Query: 281 IKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD 340
+ + K K D E + +E +++S ++ D
Sbjct: 640 VASDEKESAASDEKESAASDEEEKVASDEKEKVASDEKESAASDEEEKVASDEKEKVASD 699
Query: 341 SIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLD 400
++ +A + +V +E + A + + EK+ +
Sbjct: 700 EKEKVASDEKEKVASDE------EEKVASDEKEKVASDEEEKARNDEKEKVASDEKEKVA 753
Query: 401 HFQKYPNALAELRAPIF--EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSS 458
+K E + ++KV + + V +++ EK
Sbjct: 754 SDEKEKAGSDEKESAASDEKEKVASDVKEKVASDEKEKAASDEKGEPRREEEEKAASDEK 813
Query: 459 KVETFQSEEAP 469
+ EE
Sbjct: 814 GEPRREEEEKA 824
Score = 38.8 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 37/324 (11%), Positives = 104/324 (32%), Gaps = 11/324 (3%)
Query: 152 EIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEIL 211
++ K + + + ++ D + + + S + + + + +
Sbjct: 492 QLRKASHSLRLADSPKSTTRISCDDQEKTASDEKQKVASDEEEKARNDEKEKVASDEKEK 551
Query: 212 VGLKTGDQ---KEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE 268
V ++ E E+ ++ K+ + ++V S V +D ++ +
Sbjct: 552 VASDEKEKVASDEKEKVASDEKEKVASDEKEKVASDEEEKVASDEKEKVASDEKEKVASD 611
Query: 269 SESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFE 328
E R +K+ + V K ++ D ES +E + + +
Sbjct: 612 EEEKARNDEKEKVASDEKEKVASDEKEKVASDEKESAASDEKESAASDEEEKVASDEKEK 671
Query: 329 MSSANQKSQNVDSIDEEDLQYYHMLA--KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQ 386
++S ++S D ++ +A ++ + + +V +E +
Sbjct: 672 VASDEKESAASDEEEKVASDEKEKVASDEKEKVASDEKEKVASDEEEKVASDEKEKVASD 731
Query: 387 QLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
+ + EK+ + +K A E ++K +S +++ + + +
Sbjct: 732 EEEKARNDEKEKVASDEKEKVASDE------KEKAGSDEKESAASDEKEKVASDVKEKVA 785
Query: 447 ESSPEKLLDKSSKVETFQSEEAPS 470
EK + EE +
Sbjct: 786 SDEKEKAASDEKGEPRREEEEKAA 809
>gi|221485909|gb|EEE24179.1| trichohyalin, putative [Toxoplasma gondii GT1]
Length = 2236
Score = 41.9 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 25/294 (8%), Positives = 91/294 (30%), Gaps = 9/294 (3%)
Query: 187 EDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA---GKKVRLN 243
+ Q G + + E +++E ++ E+ K A +
Sbjct: 341 NEWQMHRAQMEKGKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVEEERK 400
Query: 244 FSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVK--RQILDYI 301
+E + + E ++ ++ + ++ + ++ ++
Sbjct: 401 KVEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKMEQEREEWQKHRAEEERGKQEAIEKA 460
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ + E + + ++ + + + +++E ++ A+
Sbjct: 461 VEEERKKTEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGKQ 520
Query: 362 IVLGTIGEKNNIEVTEEE---MQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL-RAPIF 417
+ ++ ++ +E + ++ G+ EK + + +K E +
Sbjct: 521 EAIEQAVKEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVKEERKKMEQEREEWQKHRAE 580
Query: 418 EDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
E+K ++ +RK + + + E+ + + + + E E
Sbjct: 581 EEKGKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKME 634
Score = 40.8 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 21/281 (7%), Positives = 82/281 (29%), Gaps = 6/281 (2%)
Query: 197 IVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVV 256
G + + + + + + + +E
Sbjct: 321 EKGVLEKTLSEERKKLEEERNEWQMHRAQMEKGKQEAIEKAVEEERKKMEQEREEWQKHR 380
Query: 257 VNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV--RQKVKRQILDYISNKYTFDVPESLV 314
+ + E ++ ++ + +K K++ ++ + + +
Sbjct: 381 AEEEKGKQEAIEKAVEEERKKVEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKMEQERE 440
Query: 315 ENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIE 374
E + + ++ + + + ++E ++ A+ + E+ +
Sbjct: 441 EWQKHRAEEERGKQEAIEKAVEEERKKTEQEREEWQKHRAEEEKGKQEAIEKAVEEERKK 500
Query: 375 VTEEE---MQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL-RAPIFEDKVIDHILKSVQ 430
+ +E + ++ G+ E+ + + +K E + E+K ++
Sbjct: 501 MEQEREEWQKHRAEEEKGKQEAIEQAVKEERKKMEQEREEWQKHRAEEEKGKQEAIEKAV 560
Query: 431 IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+RK + + + E+ + + + + E E
Sbjct: 561 KEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKME 601
Score = 38.1 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 33/370 (8%), Positives = 114/370 (30%), Gaps = 12/370 (3%)
Query: 80 SKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDIC 139
+ ++ ++ I E E + + + + +
Sbjct: 303 DEGGKQTKLQTEIVRLEEEKGVLEKTLSEERKKLEEERNEWQMHRAQMEKGKQEAIEKAV 362
Query: 140 EVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVG 199
E + K+++++ E K+ E + E+ V + + + G
Sbjct: 363 EEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKVEQEREEWQKHRAEE---EKG 419
Query: 200 SADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLA---GKKVRLNFSIKEVFSPLPVV 256
+ + E +++E ++ E+ K A + + +E
Sbjct: 420 KQEAIEKAVEEERKKMEQEREEWQKHRAEEERGKQEAIEKAVEEERKKTEQEREEWQKHR 479
Query: 257 VNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV--RQKVKRQILDYISNKYTFDVPESLV 314
+ + E ++ ++ + +K K++ ++ + + +
Sbjct: 480 AEEEKGKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGKQEAIEQAVKEERKKMEQERE 539
Query: 315 ENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIE 374
E + + ++ + + + +++E ++ A+ + E+ +
Sbjct: 540 EWQKHRAEEEKGKQEAIEKAVKEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVEEERKK 599
Query: 375 VTEEE---MQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL-RAPIFEDKVIDHILKSVQ 430
+ +E + ++ G+ EK + + +K E + E+K ++ +
Sbjct: 600 MEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGKQEAIEKAR 659
Query: 431 IVDRKVTFDQ 440
V+ + +
Sbjct: 660 AVEEERNKME 669
Score = 36.9 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 22/347 (6%), Positives = 105/347 (30%), Gaps = 14/347 (4%)
Query: 127 SSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVIL 186
++ V + + K+++ + E + E + E+ + +
Sbjct: 317 RLEEEKGVLEKTLSEERKKLEEERNEWQMHRAQMEKGKQEAIEKAVEEERKKMEQEREEW 376
Query: 187 EDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSI 246
+ + + + + E V + + ++ + +
Sbjct: 377 QKHRAEEEKGKQEAIEKAVEEERKKVEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKME 436
Query: 247 KEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV--RQKVKRQILDYISNK 304
+E + + E +++ ++ + +K K++ ++ +
Sbjct: 437 QEREEWQKHRAEEERGKQEAIEKAVEEERKKTEQEREEWQKHRAEEEKGKQEAIEKAVEE 496
Query: 305 YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVL 364
+ + E + + ++ + + + +++E ++ A+ +
Sbjct: 497 ERKKMEQEREEWQKHRAEEEKGKQEAIEQAVKEERKKMEQEREEWQKHRAEEEKGKQEAI 556
Query: 365 GTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDH 424
++ ++ E+E + + G ++ + ++ + + R +
Sbjct: 557 EKAVKEERKKM-EQEREEWQKHRAEEEKGKQEAIEKAVEEERKKMEQERE--------EW 607
Query: 425 ILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ + + + + E +K+ + + + ++EE +
Sbjct: 608 QKHRA---EEEKGKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGK 651
>gi|121956444|sp|Q4ZMG7|SURA_PSEU2 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
Length = 428
Score = 41.9 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 16/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 6 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 65
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V++EE+ A+ R ++ + + R +
Sbjct: 66 RLILENLQLQMGERSGIRVSDEELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 125
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 126 RREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSEE 166
>gi|302185941|ref|ZP_07262614.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
pv. syringae 642]
Length = 440
Score = 41.5 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 137
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 138 RREMIISRVRQRRVAERIQVSQQEVKNFLASDMGKAQLSEE 178
>gi|312864307|ref|ZP_07724541.1| putative foldase protein PrsA [Streptococcus vestibularis F0396]
gi|322517304|ref|ZP_08070180.1| peptidylprolyl isomerase [Streptococcus vestibularis ATCC 49124]
gi|311100308|gb|EFQ58517.1| putative foldase protein PrsA [Streptococcus vestibularis F0396]
gi|322124087|gb|EFX95637.1| peptidylprolyl isomerase [Streptococcus vestibularis ATCC 49124]
Length = 380
Score = 41.5 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVI 422
+ + ++ +V++E++ A + L ++ ++L + + R I K++
Sbjct: 134 LQKALEKEYGSKVSKEDVDKAYKKSLEQYGDQFSQVLAAYGQTEE---SYRTQIRTQKLV 190
Query: 423 DHILKSVQIVD-RKVTFDQLFDNSSESSPEKLLDKSSKV-ETFQSEEAPSE 471
++ + D + + +DN + ++ +++ + K EA +E
Sbjct: 191 EYAVNQAAQKDLTEANYKAAYDNYTPNTEVQVVSTTDKAVADKVDSEAKAE 241
>gi|320332054|gb|EFW87990.1| peptidyl-prolyl cis-trans isomerase SurA [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 440
Score = 41.5 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 55/161 (34%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R ++ + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVEQFRAALAHDGLSYNDAREQV 137
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 138 RREMIISRVRQRRVAERIQVSQQEVKNFLASDQGKAQLSEK 178
>gi|261823065|ref|YP_003261171.1| peptidyl-prolyl cis-trans isomerase SurA [Pectobacterium wasabiae
WPP163]
gi|261607078|gb|ACX89564.1| Peptidylprolyl isomerase [Pectobacterium wasabiae WPP163]
Length = 431
Score = 41.5 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 55/144 (38%), Gaps = 15/144 (10%)
Query: 314 VENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNI 373
+E++ N +LQ V+ A Q+ + R++ ++ + +K I
Sbjct: 38 LESDVNSLLQSVKLNAQQAGQQLPD--------DATLRHQITDRLIMDNIILQMAQKMGI 89
Query: 374 EVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS----- 428
+VT+E++ A+ + ++ R I ++ +I + +
Sbjct: 90 QVTDEQLDQAITNIAAQNRMSLDQLKSQLAYEGLNYNTYRNQIRKEMLISEVRNNEVRRR 149
Query: 429 VQIVDRKVTF--DQLFDNSSESSP 450
V ++ ++V Q+ + + E+
Sbjct: 150 VTVLPQEVDTLAKQIANQTGENDE 173
>gi|226323531|ref|ZP_03799049.1| hypothetical protein COPCOM_01306 [Coprococcus comes ATCC 27758]
gi|225208215|gb|EEG90569.1| hypothetical protein COPCOM_01306 [Coprococcus comes ATCC 27758]
Length = 157
Score = 41.5 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 44/130 (33%)
Query: 301 ISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLT 360
++ D+ + + + + A+ Q ++ +E AK +V
Sbjct: 1 MNKYPKKDLKNMISSIKTQYKNMASYYNLDFADFLKQYMNMDEETFNSKATQAAKDQVKA 60
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDK 420
+ I EK I+V+++ ++ + + + L + L L D
Sbjct: 61 NLAADLIIEKAKIDVSDKTLEKKYKEYAKAYGYEDVDALKKALEDAGNLENLEKTARLDI 120
Query: 421 VIDHILKSVQ 430
V D + + +
Sbjct: 121 VEDWVADNCK 130
>gi|270009789|gb|EFA06237.1| hypothetical protein TcasGA2_TC009087 [Tribolium castaneum]
Length = 1411
Score = 41.5 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 79/257 (30%), Gaps = 12/257 (4%)
Query: 218 DQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLC 277
KEI E++ + + + EV + ++ + E +
Sbjct: 540 QTKEIHITPDEENLDQIPTKLSNEVAEKVSEVSVDKDKRPKSAKHAKVKEKVEKSGGKED 599
Query: 278 SQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ 337
S +IK+ K K + + E + + +
Sbjct: 600 SARIKKQKVERPTSKQKIEEKAIKNENNLKIEAEQKKLTDQQSLKSNTSEDQEEHKSLVV 659
Query: 338 NVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKK 397
+ A + T IV E+ +++++ + + + ++
Sbjct: 660 EAAVHEPPKQDVEKSEADKVSQTDIVEKESKIVQTSELEKDQVEENVQE-VKAAETQVRE 718
Query: 398 MLD--HFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLD 455
+++ +K + +L+ +K+ D + V+++ D S+ + ++
Sbjct: 719 IVEKVELKKNEKVIEQLQ-----EKITDESKEKGVSVEKEKDLD----KKSDETVDQTTK 769
Query: 456 KSSKVETFQSEEAPSEI 472
+ VE + E E+
Sbjct: 770 EEKSVEESKDENDLKEV 786
Score = 38.8 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 80/249 (32%), Gaps = 21/249 (8%)
Query: 237 GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQ 296
GK+ ++V P + A++ E+ + + Q S + + +
Sbjct: 596 GKEDSARIKKQKVERPTSKQKIEEKAIKN--ENNLKIEAEQKKLTDQQSLKSNTSEDQEE 653
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+ + P+ VE + + + + D+ + + A
Sbjct: 654 HKSLVVEAAVHEPPKQDVEKSEADKVSQTDIVEKESKIVQTSELEKDQVEENVQEVKAAE 713
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
+ IV +KN + E++Q + + +K D +K + +
Sbjct: 714 TQVREIVEKVELKKNEKVI--EQLQEKITDESKEKGVSVEKEKDLDKKSDETVDQ---TT 768
Query: 417 FEDKVIDHILKSVQIVDRKVTFD-QLFDNSSE-------------SSPEKLLDKSSKVET 462
E+K ++ + + + T + ++ D + + EK L+K E
Sbjct: 769 KEEKSVEESKDENDLKEVETTQEFEIVDENEKGGKVVTEQKLEIVEEKEKSLEKPEDEEK 828
Query: 463 FQSEEAPSE 471
EE SE
Sbjct: 829 QVIEEKSSE 837
>gi|326911240|ref|XP_003201969.1| PREDICTED: laminin subunit beta-1-like [Meleagris gallopavo]
Length = 1706
Score = 41.5 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 24/199 (12%), Positives = 68/199 (34%), Gaps = 20/199 (10%)
Query: 284 HSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSID 343
H+ + R IL ++ S + + Q + + N + VD +
Sbjct: 1358 HNAWQKAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQEVLLKTNATKEQVDRSN 1417
Query: 344 EEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQ 403
E+ + ++ + ++IE E+ L ++ P + + + +
Sbjct: 1418 EDLRNLIKQI------RDFLMQDSADLDSIEAVANEV---LNMEMPSTPQQLQSLTEDIR 1468
Query: 404 KYPNALAELRAPIFEDKV-----IDHILKSVQI-----VDRKVTFDQLFDNSSESSPEKL 453
+ +L+++ I + + +L+ + D KVT D + E+ +
Sbjct: 1469 ERVESLSDVE-VILQQSAGDIARAEMLLEEAKKASKGATDVKVTADMVKAALEEAEKAQN 1527
Query: 454 LDKSSKVETFQSEEAPSEI 472
+ + + + + ++
Sbjct: 1528 AAEKAIKQADEDIKGTQDL 1546
>gi|330955092|gb|EGH55352.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae
Cit 7]
Length = 440
Score = 41.5 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 15/161 (9%), Positives = 54/161 (33%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
+L + + + + + I++ + Q++ +
Sbjct: 18 LLSGAVHAAVQPLDSVVAIVDNDVIMKSQMDQRVREVQQTIAKRGSGVPPAEALQPQVLD 77
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + +GE++ I V+++E+ A+ R + + + R +
Sbjct: 78 RLILENLQLQMGERSGIRVSDDELNQAIGTIAQRNNMSVDQFRAALAHDGLSYNDAREQV 137
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ +I + + +V+ ++ + + + L +
Sbjct: 138 RREMIISRVRQRRVAERIQVSQQEVKNFLASDLGKAQLSEE 178
>gi|55820539|ref|YP_138981.1| protease maturation protein [Streptococcus thermophilus LMG 18311]
gi|55822430|ref|YP_140871.1| protease maturation protein precursor [Streptococcus thermophilus
CNRZ1066]
gi|55736524|gb|AAV60166.1| protease maturation protein precursor [Streptococcus thermophilus
LMG 18311]
gi|55738415|gb|AAV62056.1| protease maturation protein precursor [Streptococcus thermophilus
CNRZ1066]
Length = 371
Score = 41.1 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVI 422
+ + ++ +V++E++ A Q ++ ++L + + R I K++
Sbjct: 125 LQKVLEKEYGSKVSKEDVDKAYKQASEQYGDQFSQVLAAYGQTEE---SYRTQIRTQKLV 181
Query: 423 DHILKSVQIVD-RKVTFDQLFDNSSESSPEKLLDKSSKV-ETFQSEEAPSE 471
++ + D + + +DN + ++ +++ + K + EA +E
Sbjct: 182 EYAVNQAAQKDLTEANYKAAYDNYTPNTEVQVVSTTDKAVADKVASEAKAE 232
>gi|46190467|ref|ZP_00121502.2| COG0544: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger
factor) [Bifidobacterium longum DJO10A]
Length = 160
Score = 41.1 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 15/139 (10%), Positives = 49/139 (35%), Gaps = 3/139 (2%)
Query: 335 KSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGH 394
+ + + +E ++ + +VL + EK +++V++ ++ + L ++
Sbjct: 17 MTPDPEKATKEQKAQAEETVEKDLRDQMVLDALAEKLDVQVSQSDVFNFLASIAQQYGMD 76
Query: 395 EKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVD--RKVTFDQLFDNSSESSPEK 452
+ K L + K + +++V+ V ++E +
Sbjct: 77 PNNFIQAIIKN-GQLGSAVQEVGRSKGLLAGMRAVKFTADGEVVDLSAFLGEAAEDEESE 135
Query: 453 LLDKSSKVETFQSEEAPSE 471
++ +S E + +
Sbjct: 136 SVEAASAAAAVADELSAKD 154
>gi|295098567|emb|CBK87657.1| Parvulin-like peptidyl-prolyl isomerase [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 428
Score = 41.1 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 14/144 (9%), Positives = 46/144 (31%)
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE 344
+ + ++ S V + +L+ + + + +
Sbjct: 1 MKNWKTLLLGVAMVANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMKSVKLNSGEAGQQL 60
Query: 345 EDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQK 404
D R++ ++ +G+K + +++E++ A+ + +M
Sbjct: 61 PDDATLRHQILERLIMDQIVLQMGQKMGVTISDEQLDQAIANIAKQNNITPDQMRSRLAY 120
Query: 405 YPNALAELRAPIFEDKVIDHILKS 428
+ A R I ++ +I + +
Sbjct: 121 DGISYATYRNQIRKEMLISEVRNN 144
>gi|291297351|ref|YP_003508749.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus ruber
DSM 1279]
gi|290472310|gb|ADD29729.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Meiothermus ruber
DSM 1279]
Length = 620
Score = 41.1 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 53/131 (40%), Gaps = 8/131 (6%)
Query: 351 HMLAKRRVLTGIVLGTIGEKN--NIEVTEEEMQSALYQQLGRFPGHEKKMLDHF-----Q 403
LA+ + +++ T ++ + V+ E++ L RF +K+ D F
Sbjct: 73 KNLAEVNFVDRMIVTTALLQDTARVRVSSGELKKELDTIKERFGLQKKEDYDRFLTQVGY 132
Query: 404 KYPNALAELRAPIFEDKVIDHILKSVQIVDRKVT-FDQLFDNSSESSPEKLLDKSSKVET 462
ELR I +K ++ I K + + ++ + +L + ++ + +
Sbjct: 133 TDSQLRNELRDQIRINKRVEEIQKKAEPTEEEMRLYFELNRDQYKNEERVQARQIVVDDK 192
Query: 463 FQSEEAPSEIS 473
+++ +E++
Sbjct: 193 TTADKIYAEVT 203
>gi|253689994|ref|YP_003019184.1| Peptidylprolyl isomerase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756572|gb|ACT14648.1| Peptidylprolyl isomerase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 431
Score = 40.8 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 57/144 (39%), Gaps = 15/144 (10%)
Query: 314 VENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNI 373
+E++ N +LQ V+ A Q+ + R++ ++ + +K I
Sbjct: 38 LESDVNSLLQSVKLNAQQAGQQLPD--------DATLRHQITDRLIMDNIILQMAQKMGI 89
Query: 374 EVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS----- 428
+VT+E+++ A+ + ++ R+ I ++ +I + +
Sbjct: 90 QVTDEQLEQAITNIAAQNRMSLDQLKSQLAYEGLNYNTYRSQIRKEMLISEVRNNEVRRR 149
Query: 429 VQIVDRKVTF--DQLFDNSSESSP 450
V ++ ++V Q+ + + E+
Sbjct: 150 VTVLPQEVDTLAKQIANQTGENDE 173
>gi|225181417|ref|ZP_03734860.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dethiobacter
alkaliphilus AHT 1]
gi|225167815|gb|EEG76623.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Dethiobacter
alkaliphilus AHT 1]
Length = 319
Score = 40.8 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 7/108 (6%)
Query: 334 QKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFP- 392
EE ++ +V+ + + V++EE+Q+ +
Sbjct: 59 MPELQQMLESEELRGMIEGEILSVMVQNVVVEQAAKDLGLSVSDEELQAEYEEFRAMMGG 118
Query: 393 ---GHEKKMLDHFQKYPNALAE-LRAPIFEDKVIDHILKSVQIVDRKV 436
+++L + L + LRA ++ DK+ H I D +
Sbjct: 119 MSDEDFQEVLKEYDINEEDLKQSLRADVYVDKLEQHFAS--DITDEDI 164
>gi|145579893|pdb|2NSA|A Chain A, Structures Of And Interactions Between Domains Of Trigger
Factor From Themotoga Maritim
Length = 170
Score = 40.8 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 66/165 (40%), Gaps = 2/165 (1%)
Query: 266 GFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKV 325
FE+ ++ ++ K+ + ++ + Q+L+ + ++ + +E N + ++
Sbjct: 2 EFETLEQLKESLKKEGKEIYDVEXKESXREQLLEKLPEIVEIEISDRTLEILVNEAINRL 61
Query: 326 RFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALY 385
+ E + +E+ + + V+ + ++ I V +EE++
Sbjct: 62 KREGRYEQIV--SSYESEEKFREELKERILDDIKRDRVIEVLAQEKGISVNDEELEKEAE 119
Query: 386 QQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ 430
+ + + + + ELR I + KV+D +L+ V+
Sbjct: 120 ELAPFWGISPDRAKSLVKARQDLREELRWAILKRKVLDLLLQEVE 164
>gi|187477204|ref|YP_785228.1| peptidyl-prolyl cis-trans isomerase [Bordetella avium 197N]
gi|122070624|sp|Q2KXA6|SURA_BORA1 RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|115421790|emb|CAJ48301.1| survival protein (peptidyl-prolyl cis-trans isomerase) [Bordetella
avium 197N]
Length = 506
Score = 40.8 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 40/124 (32%), Gaps = 14/124 (11%)
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY----- 405
+R++ + ++ I V + ++ A+ R +++ +K
Sbjct: 97 QKQVLQRLIFDRLERQEADRLGIRVDDAQVTQAINMVASRNKLTPQQLRAEVEKNGLSWD 156
Query: 406 ---PNALAELRAPIFEDKVIDHILKSVQIVDRKVT---FDQLFDNSSESSPEKLLDKSSK 459
+ E+R + ID + I D +V DQ + + + + + +
Sbjct: 157 DYRKSLREEIRTDRLRQRTID---NHIIITDAEVDAYLKDQARNPALQPQSAQAPVQEAP 213
Query: 460 VETF 463
Sbjct: 214 AAAT 217
>gi|71000559|ref|XP_754963.1| GDP/GTP exchange factor Sec2p [Aspergillus fumigatus Af293]
gi|66852600|gb|EAL92925.1| GDP/GTP exchange factor Sec2p, putative [Aspergillus fumigatus
Af293]
gi|159127976|gb|EDP53091.1| GDP/GTP exchange factor Sec2p, putative [Aspergillus fumigatus
A1163]
Length = 705
Score = 40.8 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 17/151 (11%), Positives = 54/151 (35%), Gaps = 11/151 (7%)
Query: 328 EMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSA---- 383
+ + ++ S + + A L + +N+ T +E++ A
Sbjct: 106 RLVNNSEASDTSSTPSHHPDLSSEVAALSVKLIQAINNQTTLDDNLVATRQELEQAQNRI 165
Query: 384 --LYQQLGRFPGHEKKMLDHFQKYPNA-LAELRAPIFEDKVIDHILKSVQIVDRKVTFDQ 440
L + ++ ++ + + + +++L+A + E+K I++ + +
Sbjct: 166 KSLESENEKYRHDIEQAVLIKKADADREISQLKAALAEEKAQRAIVEKSKKTIE----QE 221
Query: 441 LFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
L ++ E ++ ++ E +E
Sbjct: 222 LETLTAALFEEANKMVAAAKLEREAVEKKNE 252
>gi|328714736|ref|XP_001947075.2| PREDICTED: neurobeachin-like [Acyrthosiphon pisum]
Length = 3079
Score = 40.8 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 58/492 (11%), Positives = 141/492 (28%), Gaps = 47/492 (9%)
Query: 4 IEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRS---KANIKGFRPGKVPLSHIKSLYGK 60
+ S L ++++ + ++ ++ + ED+ N+
Sbjct: 1031 TQTQSNELSSTIEIVKSNEEISKEYDNKFEDVFKENENENLD------------------ 1072
Query: 61 SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
S TIDEI+ ++ + + I E +D+ V L +S +I
Sbjct: 1073 SPNETTIDEIVPTVIEN--KQDLLDLNKKNENDIIEQVNDVIPLKGVEDVKTHLNISEEI 1130
Query: 121 LP-QIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTV 179
+ + L + + + + E + V +
Sbjct: 1131 KMLDTAVKNSIQLDNSITEKYLQVNGDILPVDHESTERNFDVTIENHIISNGEDIVSKDI 1190
Query: 180 SVDNVILEDQSK--KNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAG 237
+ N I S+ K+ + + ++ + S +
Sbjct: 1191 EIHNSINTLLSEDLKDNSITEKENIEIAIMIDSGSNESVKEKINSNDLNQDSISNSSDSE 1250
Query: 238 KKVRLNFSIKEVFSPLPVVVNNDLAVRLG-----FESESAMRGLCSQKIKQHSEFLVRQK 292
+ E+ V ++ + CS+ +E K
Sbjct: 1251 TIINSECLQHEINENGVENNIEQNIVAQPISVITVQTFDTVDSDCSEAYLTPNELNDTPK 1310
Query: 293 VKRQILDYISNKYTFDVPESLVENE-----YNGILQKVRFEMSSANQKSQNVDSIDEEDL 347
K + ++ +N T V + + N ++ S A ++ Q + E
Sbjct: 1311 KKLEKINLNANDLTSIVNDDNMPQFNPSIECNNEVEIPSNNTSEAIKEQQIKEGDIEHFA 1370
Query: 348 QYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPN 407
+Y + + V+ E EE + + + + + + ++ +
Sbjct: 1371 EYDIEVEENVNK---VVDNFNNVAENENKIEEKVNNIEENIDKIEENVHNTIETIHNIND 1427
Query: 408 ALAELRAPIFEDKVI------DHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVE 461
+ E+ + K D I+++ + + F + ++ +E K L + V
Sbjct: 1428 NVDEVIEHVDIVKANEVDIKNDKIIENCNKTETE--FKEDVNDVAEKEKNKSLPLTDSVT 1485
Query: 462 TFQSEEAPSEIS 473
E E S
Sbjct: 1486 DNIKENKSLETS 1497
>gi|255020576|ref|ZP_05292639.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [Acidithiobacillus caldus ATCC 51756]
gi|254969961|gb|EET27460.1| Survival protein SurA precursor (Peptidyl-prolyl cis-trans
isomerase SurA) [Acidithiobacillus caldus ATCC 51756]
Length = 479
Score = 40.8 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 8/105 (7%), Positives = 36/105 (34%)
Query: 324 KVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSA 383
++ +++ + Q D + ++++ V I ++ I+V + + A
Sbjct: 89 QLAQRVAAIRARLQQQDPNALPPEEVLRRQVLQQMILQDVELQIAKRAGIKVDQATLDQA 148
Query: 384 LYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS 428
+ ++ + + + + + ++D + +
Sbjct: 149 IGNIARANNLTPDQLRQALAQQGQSWTQFEDDLRDRILVDRLTQQ 193
>gi|224062704|ref|XP_002197706.1| PREDICTED: similar to A-kinase anchor protein 13 [Taeniopygia
guttata]
Length = 1560
Score = 40.8 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 29/296 (9%), Positives = 93/296 (31%), Gaps = 13/296 (4%)
Query: 155 KNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGL 214
+V VD ++ + + S L +E+ +V
Sbjct: 680 HTWKFLSQSTDSLHKISRVNESMESLVDEGADMNEGQLMGDLELDSKQLEAESWSQVVDS 739
Query: 215 KTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMR 274
K Q+ + +D + + + + ++ + +
Sbjct: 740 KFLQQQYKDVVKRQDVIYELMQTEMHHVRTLKIMNDVYSAAMLKELQFDQQVVDKLFPCL 799
Query: 275 GLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSA-N 333
Q + ++ +K + N + + LV ++++
Sbjct: 800 ENLLHIHSQFFQRILERKKESLADKSEKNFVIRRIGDILVNQFSGENAERMKKTYGKFCG 859
Query: 334 QKSQNVDSIDEEDLQYYHMLA--KRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRF 391
++ V+ + + A K+++ + +V + + VT Q++ ++
Sbjct: 860 HHNEAVNYFKDLYSKDKRFQAFVKKKMSSSLVRRLGIPECILLVT---------QRITKY 910
Query: 392 PGHEKKMLDHFQKYPNALAELRAPI-FEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
P +++L + ++ +L + VI + V ++K+ +++++ +
Sbjct: 911 PVLLQRILQYTKENEVEHEDLTQSLNLVKDVIAAVNSKVSKYEKKMRLEEIYNRTD 966
>gi|294634977|ref|ZP_06713494.1| peptidylprolyl cis-trans isomerase SurA [Edwardsiella tarda ATCC
23685]
gi|291091576|gb|EFE24137.1| peptidylprolyl cis-trans isomerase SurA [Edwardsiella tarda ATCC
23685]
Length = 434
Score = 40.4 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 13/144 (9%), Positives = 46/144 (31%)
Query: 285 SEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDE 344
+ + + + V + + + +L+ M + + +
Sbjct: 1 MKNWRTLILGVVLCANTAFAAPQVVDKVVAIVDNGVVLESDVDGMMKSVKLNAQQAGQQL 60
Query: 345 EDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQK 404
D R++ + + ++ +EV++ E+ +A+ + +++
Sbjct: 61 PDNATLRHQILERLIMDNIQLQMAKRMGLEVSDSELDNAINGIAAQNHLTPQQLRSRLAA 120
Query: 405 YPNALAELRAPIFEDKVIDHILKS 428
RA I ++ +I + +
Sbjct: 121 DGLDYKAYRAQIRKEMLISEVRNN 144
>gi|255561889|ref|XP_002521953.1| myosin XI, putative [Ricinus communis]
gi|223538757|gb|EEF40357.1| myosin XI, putative [Ricinus communis]
Length = 1533
Score = 40.4 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 23/188 (12%), Positives = 66/188 (35%), Gaps = 4/188 (2%)
Query: 287 FLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED 346
+ K ++ L+K++ E + + ++++
Sbjct: 842 QARWRCHKAVSYYKRLHRGVIVSQTRWRGRVARRELRKLKMEARETGALKEAKNKLEKQV 901
Query: 347 LQ-YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ + + ++R+ T + E + + EEMQ + + + ++
Sbjct: 902 EELTWRLQLEKRLRTDLEEAKAQEATKFQNSLEEMQKKIEESNAMLVKEREAAKKAIEEA 961
Query: 406 PNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
P + E + + + K I+ + + + KV+ D + E+ + + S E +
Sbjct: 962 PPVIKETQVLVEDTKKIESLTEE--VEKLKVSLDSEKQRAYENEKKYNEAQGSCEEKQKK 1019
Query: 466 -EEAPSEI 472
E+A ++
Sbjct: 1020 LEDAEKKV 1027
>gi|210634928|ref|ZP_03298375.1| hypothetical protein COLSTE_02304 [Collinsella stercoris DSM 13279]
gi|210158557|gb|EEA89528.1| hypothetical protein COLSTE_02304 [Collinsella stercoris DSM 13279]
Length = 417
Score = 40.4 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 21/181 (11%), Positives = 64/181 (35%), Gaps = 20/181 (11%)
Query: 312 SLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKN 371
++ E+ + +R +++ S + Y ++ +L +
Sbjct: 90 NIKEDSVTEQIMSMRQSAYESDKDWATYLSQQGMTPETYRENVIDSIVRQYLLVQAEKDY 149
Query: 372 NIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQK----YPNALAELRAPIFEDKVIDHILK 427
I+VT+E++ A + + G E ++ + L +++ + + K+ + +
Sbjct: 150 GIKVTQEDLDKAWKEAVEGNGGDEDAFVETISQFGFTKETYLENIKSSLAQQKLREKVAG 209
Query: 428 SVQIVDRKV---------TFDQ-------LFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ D + T++ LF + +++ E+ ++ + + E
Sbjct: 210 VKKPSDEDIVAYLNENLSTYNDARRSSHILFKVAEDATEEERAKVEAEAQKVLDKLNAGE 269
Query: 472 I 472
I
Sbjct: 270 I 270
>gi|1883014|emb|CAA62444.1| HSP70 [Cyanophora paradoxa]
Length = 465
Score = 40.4 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 376 TEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA---ELRAPIFEDKVIDHILK-SVQI 431
+++++ + + ++ +++ D + + LR I E+KV + + ++
Sbjct: 329 SKDDI-ERMVNEAEKYKKQDEEARDRIEAKNSLENYAYNLRNSIREEKVAAKMEEDDKKV 387
Query: 432 VDRKVTFD-QLFDNSSESSPEKLLDKSSKVETFQ 464
++ +V + + + ++ E+ ++E+
Sbjct: 388 IEEEVDKAIKFLETNPDADKEEFEKVQKELESKA 421
>gi|312277862|gb|ADQ62519.1| Protease maturation protein [Streptococcus thermophilus ND03]
Length = 380
Score = 40.0 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVI 422
+ + ++ +V++E++ A Q ++ ++L + + R I K++
Sbjct: 134 LQKVLEKEYGSKVSKEDVDKAYKQASEQYGDQFSQVLAAYGQTEE---SYRTQIRTQKLV 190
Query: 423 DHILKSVQIVD-RKVTFDQLFDNSSESSPEKLLDKSSKV-ETFQSEEAPSE 471
++ + D + + +DN + ++ +++ + K + EA +E
Sbjct: 191 EYAVNQAAQKDLTEANYKAAYDNYTPNTEVQVVSTTDKAVADKVASEAKAE 241
>gi|227114234|ref|ZP_03827890.1| peptidyl-prolyl cis-trans isomerase SurA [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 431
Score = 40.0 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 43/115 (37%), Gaps = 8/115 (6%)
Query: 314 VENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNI 373
+E++ N +LQ V+ A Q+ + R++ ++ + +K I
Sbjct: 38 LESDVNSLLQSVKLNAQQAGQQLPD--------DATLRHQITDRLIMDNIILQMAQKMGI 89
Query: 374 EVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS 428
+VT+E++ A+ + ++ R I ++ +I + +
Sbjct: 90 QVTDEQLNQAITNIAAQNRMSLDQLKSQLAYEGLNYNTYRNQIRKEMLISEVRNN 144
>gi|77918655|ref|YP_356470.1| peptidyl-prolyl cis-trans isomerase [Pelobacter carbinolicus DSM
2380]
gi|77544738|gb|ABA88300.1| peptidyl-prolyl cis-trans isomerase [Pelobacter carbinolicus DSM
2380]
Length = 649
Score = 40.0 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 49/133 (36%), Gaps = 8/133 (6%)
Query: 315 ENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ-YYHMLAKRRVLTGIVLGTIGEKNNI 373
+ Q M +K E + Q + A +++ ++L + +I
Sbjct: 53 DAISYQDFQITYQNMRQEMEKRFGRSLPPEIEKQLQLNTQAYEQLVNRLLLLQEADNRDI 112
Query: 374 EVTEEEMQSALYQQ--LGRFPGHEKKMLDHFQKYPNALA-----ELRAPIFEDKVIDHIL 426
V ++E++ A+ + ++K Y + + +R + KV++ I
Sbjct: 113 AVDKDELRQAIADIPAFQKDGQFDRKRYQEVLAYQHLTSRAFERNMREQLLLGKVVEAIK 172
Query: 427 KSVQIVDRKVTFD 439
+ ++ D+ + +
Sbjct: 173 QDAEVTDQDIDHE 185
>gi|116627350|ref|YP_819969.1| protease maturation protein precursor [Streptococcus thermophilus
LMD-9]
gi|116100627|gb|ABJ65773.1| Parvulin-like peptidyl-prolyl isomerase [Streptococcus thermophilus
LMD-9]
Length = 380
Score = 40.0 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVI 422
+ + ++ +V++E++ A Q ++ ++L + + R I K++
Sbjct: 134 LQKVLEKEYGSKVSKEDVDKAYKQASEQYGDQFSQVLAAYGQTEE---SYRTQIRTQKLV 190
Query: 423 DHILKSVQIVD-RKVTFDQLFDNSSESSPEKLLDKSSKV-ETFQSEEAPSE 471
++ + D + + +DN + ++ +++ + K + EA +E
Sbjct: 191 EYAVNQAAQKDLTEANYKAAYDNYTPNTEVQVVSTTDKAVADKVASEAKAE 241
>gi|194756214|ref|XP_001960374.1| GF13333 [Drosophila ananassae]
gi|190621672|gb|EDV37196.1| GF13333 [Drosophila ananassae]
Length = 4865
Score = 40.0 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 49/410 (11%), Positives = 139/410 (33%), Gaps = 9/410 (2%)
Query: 69 EIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISS 128
++E + +S++ A +P + +E +SD + ++ + S
Sbjct: 4070 RALEEQKRKKISEKKAEEAKQPEVKESETKSDQAKAFEKQALEEQKLEEKTEKQVKTKSY 4129
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILED 188
+ ++ + E K +++ ++ ++ D
Sbjct: 4130 KQSEKAEVSGVLAEKISEKKAEEAKQPEVKESETKPDQAKALEEQKLEEKTEKQVKTKSD 4189
Query: 189 Q---SKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ + + + +K + K + E+ +++ A K+V+
Sbjct: 4190 KKSEKAEVSEVLAEKISEKKPEEAKQPEVKESETKPDQAKALEEQKLEEKANKQVKTKSE 4249
Query: 246 IKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
K + + V+ ++ + E++ K Q + ++++ + +
Sbjct: 4250 KKPEQAEVSEVLAEKISEKKAEEAKQPEVKDSETKSDQAKALEKQALEEQKLEEKTEKQV 4309
Query: 306 TFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLG 365
+ + E + +L + E + K V + + Q + + + L
Sbjct: 4310 KTKSDKKSEKAEVSEVLAEKISEKKAEEAKQPEVKESETKPDQAKAL--EEQKLEEKANK 4367
Query: 366 TIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKM--LDHFQKYPNALAELRAPIFED-KVI 422
+ K+ + + E+ L +++ E K + + P+ L E+ K+
Sbjct: 4368 QVKTKSEKKPEQAEVSEVLAEKISEKKPEEAKQPEVKESEAKPDQPKALEKQALEEQKLE 4427
Query: 423 DHILKSVQIV-DRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ K V+ D+K ++ + +E EK +++ + E +SE P +
Sbjct: 4428 EKTEKQVKTKSDKKSEKAEVSEVLAEKISEKKPEEAKQPEVKESEAKPDQ 4477
>gi|237835003|ref|XP_002366799.1| trichohyalin, putative [Toxoplasma gondii ME49]
gi|211964463|gb|EEA99658.1| trichohyalin, putative [Toxoplasma gondii ME49]
Length = 2238
Score = 40.0 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 29/295 (9%), Positives = 92/295 (31%), Gaps = 11/295 (3%)
Query: 187 EDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSI 246
+ + G + + E +++E ++ E+ K A +K
Sbjct: 341 NEWKMHRAEMEKGKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVKEERK 400
Query: 247 KEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ-----KVKRQILDYI 301
K ++ + E+ +K++Q E + K K++ ++
Sbjct: 401 KLEEERNEWKMHRAEMEKGKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGKQEAIEKA 460
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ + + E + + ++ + + + +++E ++ A+
Sbjct: 461 VKEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVKEERKKMEQEREEWQKHRAEEEKGKQ 520
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP-----I 416
+ ++ + EEE + G ++ + ++ + + R
Sbjct: 521 EAIEKAVKEER-KKLEEERNEWKMHRAEMEKGKQEAIEKAVEEERKKMEQEREEWQKHRA 579
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
E+K ++ +RK + + + E+ + + + + E E
Sbjct: 580 EEEKGKQEAIEKAVKEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKME 634
Score = 39.2 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 28/351 (7%), Positives = 105/351 (29%), Gaps = 6/351 (1%)
Query: 127 SSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVIL 186
++ V + + K+++ + E + E + E+ + +
Sbjct: 317 RLEEEKGVLEKTLLEERKKLEEERNEWKMHRAEMEKGKQEAIEKAVEEERKKMEQEREEW 376
Query: 187 EDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSI 246
+ + + + + + + + + K + +
Sbjct: 377 QKHRAEEEKGKQEAIEKAVKEERKKLEEERNEWKMHRAEMEKGKQEAIEKAVEEERKKME 436
Query: 247 KEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV--RQKVKRQILDYISNK 304
+E + + E ++ ++ + +K K++ ++ +
Sbjct: 437 QEREEWQKHRAEEEKGKQEAIEKAVKEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVKE 496
Query: 305 YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVL 364
+ + E + + ++ + + + ++EE ++ A+ +
Sbjct: 497 ERKKMEQEREEWQKHRAEEEKGKQEAIEKAVKEERKKLEEERNEWKMHRAEMEKGKQEAI 556
Query: 365 GTIGEKNNIEVTEEE---MQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL-RAPIFEDK 420
E+ ++ +E + ++ G+ EK + + +K E + E+K
Sbjct: 557 EKAVEEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVKEERKKMEQEREEWQKHRAEEEK 616
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
++ +RK + + + E+ + + + + E E
Sbjct: 617 GKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKME 667
>gi|320544016|ref|NP_001188951.1| Stretchin-Mlck, isoform L [Drosophila melanogaster]
gi|318068621|gb|ADV37197.1| Stretchin-Mlck, isoform L [Drosophila melanogaster]
Length = 9839
Score = 40.0 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 58/407 (14%), Positives = 138/407 (33%), Gaps = 15/407 (3%)
Query: 73 EIVPEILSKRDER--AAMRPSITINEGESD--ITSGLIEGTVDLKLRLSYDILPQIEISS 128
E +I+ +++ AA + E D I + E K L + L + E+ +
Sbjct: 2561 EEFKQIIESQNQNKDAAGDIKKSETEDVVDHSIEKKIEEPKRSEKKDLDKEFLEEKELKA 2620
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILED 188
Q QDI + +K ++ + E + E+ + + +D +LE+
Sbjct: 2621 SAKKQGDQDIEQKSQKPEVSEVVAEKISEGKIEEPKKPEEMDTEAKSEKATVLDKQVLEE 2680
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQK-EIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ + G D+ ++ + V ++ E P+ +KD K + K
Sbjct: 2681 KELEASAEKQGDQDVEKKSQKPEVSEVVAEKISEETIEEPKKPEVKDTEIKSEKATALDK 2740
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
+V + + E +S + ++ SE + + K ++ D
Sbjct: 2741 QVLEEKELEASAQKQCDQDVEKKSQKPEVSEIVAEKISEKTIEEPKKPEVKDTEIKSEKA 2800
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTI 367
+ V E + +KSQ + + + + V T
Sbjct: 2801 TALDKQVLEEKELEASAQKQGDQDVEKKSQKPEVSEVVAEKISEETIEEPKKPE-VKETE 2859
Query: 368 GEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILK 427
+ V ++++ + ++ + FQK + + +K+ + ++
Sbjct: 2860 VKSEKATVLDKQVLEEKELEASAQKQGDQDVEKKFQKAE------VSEVVAEKISEETIE 2913
Query: 428 SVQ---IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ + D ++ ++ + EK L+ S++ + Q E S+
Sbjct: 2914 EPKKPEVKDTEIKSEKATALDKQVLEEKELEASAQKQGDQDVEKKSQ 2960
Score = 38.5 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 45/420 (10%), Positives = 119/420 (28%), Gaps = 16/420 (3%)
Query: 52 SHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVD 111
H+ Y K I + I+ + +++ + +PS+ + + + + TV
Sbjct: 2427 EHVIQTYIKEIK---TNIILTKAAIQLIDDSNL--FTKPSLLVPKLVNLEKLSELTQTVK 2481
Query: 112 LKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD 171
L + S +++ + + + + E EK + ++ E + +
Sbjct: 2482 LIDKSSKEMIGLQQNLMDIFIILDDLLDERTEKINPKIENIKKILLSEYDYIEKKEGQLN 2541
Query: 172 KVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
V+ + + + D ++ Q I +I E+
Sbjct: 2542 TAVVNGKIKLITEKILDICEEFKQIIESQNQNKDAAGDIKKSETEDVVDHSIEKKIEEPK 2601
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ 291
+ + S + E + S+ + +
Sbjct: 2602 RSEKKDLDKEFLEEKELKASAKKQGDQDIEQKSQKPEVSEVVAEKISEGKIEEPKKPEEM 2661
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+ + + L + Q V + E +
Sbjct: 2662 DTEAKSEKATVLDKQVLEEKELEASAEKQGDQDVEK--------KSQKPEVSEVVAEKIS 2713
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
V T + ++++ + ++ + QK ++E
Sbjct: 2714 EETIEEPKKPEVKDTEIKSEKATALDKQVLEEKELEASAQKQCDQDVEKKSQKPE--VSE 2771
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ A +K I+ K ++ D ++ ++ + EK L+ S++ + Q E S+
Sbjct: 2772 IVAEKISEKTIEE-PKKPEVKDTEIKSEKATALDKQVLEEKELEASAQKQGDQDVEKKSQ 2830
>gi|332665930|ref|YP_004448718.1| hypothetical protein Halhy_3997 [Haliscomenobacter hydrossis DSM
1100]
gi|332334744|gb|AEE51845.1| hypothetical protein Halhy_3997 [Haliscomenobacter hydrossis DSM
1100]
Length = 1111
Score = 40.0 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 28/271 (10%), Positives = 82/271 (30%), Gaps = 11/271 (4%)
Query: 206 ETTEILVGLKTGDQKEIERFFPE-DHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVR 264
+ +GLK GD+ + D A + + FS+ + ND ++
Sbjct: 455 SFDALELGLKPGDELSYYFEVKDNDAVNGSKAARTGVMIFSMPSIEEMEKRAEQNDDKIK 514
Query: 265 LGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQK 324
+ A ++I++ E L+++K K E + + +
Sbjct: 515 DNLKDALAEAKKLQEEIRRLQEKLLQEKDINWQTRKQLEKLLERQKELEKQIKEAQKAFE 574
Query: 325 VRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSAL 384
+ ++ +E L+ + + ++ +E +
Sbjct: 575 ENKKNQEQLGETPEELQEKQEMLEELMESLEDPEMKELMEKIEKLMQEME------KDQA 628
Query: 385 YQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQ----IVDRKVTFDQ 440
+ + + +K + ++ +L +K D + + + + ++ +
Sbjct: 629 LEMMEQMKDQNEKRENELERMEELFKQLELEQEINKAADKLDEMAKKQEELSEKTEDKKE 688
Query: 441 LFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ + E + + + E +E
Sbjct: 689 AAEQLEKQQEELNKEFEDLEKKMEDIEKKNE 719
>gi|227327727|ref|ZP_03831751.1| peptidyl-prolyl cis-trans isomerase SurA [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 431
Score = 40.0 bits (91), Expect = 0.94, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 44/115 (38%), Gaps = 8/115 (6%)
Query: 314 VENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNI 373
+E++ N +LQ V+ A Q+ + R++ ++ + +K I
Sbjct: 38 LESDVNSLLQSVKLNAQQAGQQLPD--------DATLRHQITDRLIMDNIILQMAQKMGI 89
Query: 374 EVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS 428
+VT+E++ A+ + ++ + R I ++ +I + +
Sbjct: 90 QVTDEQLDQAITNIAAQNRMSLDQLKSQLAYEGLNYSTYRNQIRKEMLISEVRNN 144
>gi|320544014|ref|NP_001188950.1| Stretchin-Mlck, isoform K [Drosophila melanogaster]
gi|318068620|gb|ADV37196.1| Stretchin-Mlck, isoform K [Drosophila melanogaster]
Length = 9270
Score = 40.0 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 58/407 (14%), Positives = 138/407 (33%), Gaps = 15/407 (3%)
Query: 73 EIVPEILSKRDER--AAMRPSITINEGESD--ITSGLIEGTVDLKLRLSYDILPQIEISS 128
E +I+ +++ AA + E D I + E K L + L + E+ +
Sbjct: 2561 EEFKQIIESQNQNKDAAGDIKKSETEDVVDHSIEKKIEEPKRSEKKDLDKEFLEEKELKA 2620
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILED 188
Q QDI + +K ++ + E + E+ + + +D +LE+
Sbjct: 2621 SAKKQGDQDIEQKSQKPEVSEVVAEKISEGKIEEPKKPEEMDTEAKSEKATVLDKQVLEE 2680
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQK-EIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ + G D+ ++ + V ++ E P+ +KD K + K
Sbjct: 2681 KELEASAEKQGDQDVEKKSQKPEVSEVVAEKISEETIEEPKKPEVKDTEIKSEKATALDK 2740
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
+V + + E +S + ++ SE + + K ++ D
Sbjct: 2741 QVLEEKELEASAQKQCDQDVEKKSQKPEVSEIVAEKISEKTIEEPKKPEVKDTEIKSEKA 2800
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTI 367
+ V E + +KSQ + + + + V T
Sbjct: 2801 TALDKQVLEEKELEASAQKQGDQDVEKKSQKPEVSEVVAEKISEETIEEPKKPE-VKETE 2859
Query: 368 GEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILK 427
+ V ++++ + ++ + FQK + + +K+ + ++
Sbjct: 2860 VKSEKATVLDKQVLEEKELEASAQKQGDQDVEKKFQKAE------VSEVVAEKISEETIE 2913
Query: 428 SVQ---IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ + D ++ ++ + EK L+ S++ + Q E S+
Sbjct: 2914 EPKKPEVKDTEIKSEKATALDKQVLEEKELEASAQKQGDQDVEKKSQ 2960
Score = 38.5 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 45/420 (10%), Positives = 119/420 (28%), Gaps = 16/420 (3%)
Query: 52 SHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVD 111
H+ Y K I + I+ + +++ + +PS+ + + + + TV
Sbjct: 2427 EHVIQTYIKEIK---TNIILTKAAIQLIDDSNL--FTKPSLLVPKLVNLEKLSELTQTVK 2481
Query: 112 LKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD 171
L + S +++ + + + + E EK + ++ E + +
Sbjct: 2482 LIDKSSKEMIGLQQNLMDIFIILDDLLDERTEKINPKIENIKKILLSEYDYIEKKEGQLN 2541
Query: 172 KVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
V+ + + + D ++ Q I +I E+
Sbjct: 2542 TAVVNGKIKLITEKILDICEEFKQIIESQNQNKDAAGDIKKSETEDVVDHSIEKKIEEPK 2601
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ 291
+ + S + E + S+ + +
Sbjct: 2602 RSEKKDLDKEFLEEKELKASAKKQGDQDIEQKSQKPEVSEVVAEKISEGKIEEPKKPEEM 2661
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+ + + L + Q V + E +
Sbjct: 2662 DTEAKSEKATVLDKQVLEEKELEASAEKQGDQDVEK--------KSQKPEVSEVVAEKIS 2713
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
V T + ++++ + ++ + QK ++E
Sbjct: 2714 EETIEEPKKPEVKDTEIKSEKATALDKQVLEEKELEASAQKQCDQDVEKKSQKPE--VSE 2771
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ A +K I+ K ++ D ++ ++ + EK L+ S++ + Q E S+
Sbjct: 2772 IVAEKISEKTIEE-PKKPEVKDTEIKSEKATALDKQVLEEKELEASAQKQGDQDVEKKSQ 2830
>gi|148553334|ref|YP_001260916.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas
wittichii RW1]
gi|148498524|gb|ABQ66778.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Sphingomonas
wittichii RW1]
Length = 446
Score = 39.6 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 40/106 (37%), Gaps = 5/106 (4%)
Query: 337 QNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEK 396
N +I +E+ + + R ++ + +EV+ EE+Q + F K
Sbjct: 80 ANGGNIPDEERERLRLQVLRNLIDETLQIQEATAQKVEVSREEVQQTYDRVAANFRKSPK 139
Query: 397 KMLDHFQKYPNALAELRAPIFEDKVIDHILKS-----VQIVDRKVT 437
+ + + ++ A ++ I + +L V + D +V
Sbjct: 140 EFAEFLHEKGSSQASIKRQIEGEAAWRRVLSRKVEPFVAVSDEEVN 185
>gi|77461354|ref|YP_350861.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas
fluorescens Pf0-1]
gi|121956432|sp|Q3K5T4|SURA_PSEPF RecName: Full=Chaperone surA; AltName: Full=Peptidyl-prolyl
cis-trans isomerase surA; Short=PPIase surA; AltName:
Full=Rotamase surA; Flags: Precursor
gi|77385357|gb|ABA76870.1| putative chaperone [Pseudomonas fluorescens Pf0-1]
Length = 426
Score = 39.6 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 52/146 (35%), Gaps = 5/146 (3%)
Query: 297 ILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR 356
L +N + + + + ++Q + Q++
Sbjct: 6 FLGTAANAAVQSIDRVVAIVDNDVVMQSQLDQRVHEVQQTIAKRGGGLPPPGVLDQQVLE 65
Query: 357 RVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI 416
R++ + IGE++ I +T+EE+ A+ R ++ + + + R I
Sbjct: 66 RLIVENLQLQIGERSGIRITDEELNQAVGTIAQRNNMTPEQFRIALSRDGLSYEDAREQI 125
Query: 417 FEDKVID-----HILKSVQIVDRKVT 437
+ VI + + +Q+ +++V
Sbjct: 126 RREMVISRVRQRRVAERIQVSEQEVK 151
>gi|305665800|ref|YP_003862087.1| hypothetical protein FB2170_05905 [Maribacter sp. HTCC2170]
gi|88710566|gb|EAR02798.1| hypothetical protein FB2170_05905 [Maribacter sp. HTCC2170]
Length = 1157
Score = 39.6 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 50/409 (12%), Positives = 126/409 (30%), Gaps = 23/409 (5%)
Query: 77 EILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQ 136
+I+S+ + ++ + T + + + SY I E + +
Sbjct: 324 KIVSENTSKVLLKEK-DTVQDFLKSTENVFMFSKKIYSDYSYGITTSNENVDEYEKLDYK 382
Query: 137 DICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQF 196
D R + ++ ES ++ V +D++K+ V+
Sbjct: 383 FTTIKDSYPSIRVEDVVDSVDLNLRYYVGESSDDYQLVNIRLVCY--PEFDDENKQYVEI 440
Query: 197 IVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVV 256
S++ GL + +F + GK ++ + + +
Sbjct: 441 SRPSSNFNQFYYTFPSGLDLEEDVPYSFYFEAIDNDAIHGGKSIKSQVFGTTLLNEDELR 500
Query: 257 VNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVEN 316
+ ++ ++ + E +QK K Q+ N+ + + +
Sbjct: 501 KMELQKQQSIIKNMDESVERFEEQQESLKEISQKQKEKEQLNYSDENQIKDFLRKQQNQE 560
Query: 317 EYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVT 376
+ K E ++ ++S+ +E L+ + A++ +K ++
Sbjct: 561 DLMQKFSKELRENLEKTTNNEELNSLLKERLERQELEARKNERL----LEELDKIADKID 616
Query: 377 EEEMQSALYQQL------GRFPGHEKKMLDHFQ---KYPNALAELR------APIFEDKV 421
+EE+ L + R ++ + K EL+ + + E K+
Sbjct: 617 KEELAKRLEELANKQKNSKRNLEQLLELTKRYYVTEKAAQLADELKKLSKKQSLLSEQKL 676
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ I + + V F++L + E + K + S
Sbjct: 677 KEEISAQ-EQRELNVDFEELANELGELEKDNQDLKKPIDLEVNKKREES 724
>gi|222641917|gb|EEE70049.1| hypothetical protein OsJ_30007 [Oryza sativa Japonica Group]
Length = 219
Score = 39.6 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 42/146 (28%), Gaps = 30/146 (20%)
Query: 3 VIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKAN-IKGFRP---------GK---- 48
V + E +L V + F + + A + GFR GK
Sbjct: 77 VSVQTEEDGLIKLRVTVADTMTESIFEKVFSKNVAAAQPLPGFRRMKGGLLLYLGKPYFV 136
Query: 49 ------------VPLSHIKSLYGKS-ILSETIDEIIKEIVPEILSKRDERAAMRPSITIN 95
+P L G S + ETI II + E + K D A+ +
Sbjct: 137 SISVQIELDEHAIPKEIALHLIGPSKVKKETIKNIISLTIAEYVQKEDLDASKNLKV--- 193
Query: 96 EGESDITSGLIEGTVDLKLRLSYDIL 121
+ E + ++ +
Sbjct: 194 LQTYEELEAAFEPGKEFCFDATFHLQ 219
>gi|320544026|ref|NP_001188956.1| Stretchin-Mlck, isoform Q [Drosophila melanogaster]
gi|318068626|gb|ADV37202.1| Stretchin-Mlck, isoform Q [Drosophila melanogaster]
Length = 9528
Score = 39.6 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 58/407 (14%), Positives = 138/407 (33%), Gaps = 15/407 (3%)
Query: 73 EIVPEILSKRDER--AAMRPSITINEGESD--ITSGLIEGTVDLKLRLSYDILPQIEISS 128
E +I+ +++ AA + E D I + E K L + L + E+ +
Sbjct: 2561 EEFKQIIESQNQNKDAAGDIKKSETEDVVDHSIEKKIEEPKRSEKKDLDKEFLEEKELKA 2620
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILED 188
Q QDI + +K ++ + E + E+ + + +D +LE+
Sbjct: 2621 SAKKQGDQDIEQKSQKPEVSEVVAEKISEGKIEEPKKPEEMDTEAKSEKATVLDKQVLEE 2680
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQK-EIERFFPEDHSIKDLAGKKVRLNFSIK 247
+ + G D+ ++ + V ++ E P+ +KD K + K
Sbjct: 2681 KELEASAEKQGDQDVEKKSQKPEVSEVVAEKISEETIEEPKKPEVKDTEIKSEKATALDK 2740
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
+V + + E +S + ++ SE + + K ++ D
Sbjct: 2741 QVLEEKELEASAQKQCDQDVEKKSQKPEVSEIVAEKISEKTIEEPKKPEVKDTEIKSEKA 2800
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTI 367
+ V E + +KSQ + + + + V T
Sbjct: 2801 TALDKQVLEEKELEASAQKQGDQDVEKKSQKPEVSEVVAEKISEETIEEPKKPE-VKETE 2859
Query: 368 GEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILK 427
+ V ++++ + ++ + FQK + + +K+ + ++
Sbjct: 2860 VKSEKATVLDKQVLEEKELEASAQKQGDQDVEKKFQKAE------VSEVVAEKISEETIE 2913
Query: 428 SVQ---IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ + D ++ ++ + EK L+ S++ + Q E S+
Sbjct: 2914 EPKKPEVKDTEIKSEKATALDKQVLEEKELEASAQKQGDQDVEKKSQ 2960
Score = 38.1 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 45/420 (10%), Positives = 119/420 (28%), Gaps = 16/420 (3%)
Query: 52 SHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVD 111
H+ Y K I + I+ + +++ + +PS+ + + + + TV
Sbjct: 2427 EHVIQTYIKEIK---TNIILTKAAIQLIDDSNL--FTKPSLLVPKLVNLEKLSELTQTVK 2481
Query: 112 LKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD 171
L + S +++ + + + + E EK + ++ E + +
Sbjct: 2482 LIDKSSKEMIGLQQNLMDIFIILDDLLDERTEKINPKIENIKKILLSEYDYIEKKEGQLN 2541
Query: 172 KVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
V+ + + + D ++ Q I +I E+
Sbjct: 2542 TAVVNGKIKLITEKILDICEEFKQIIESQNQNKDAAGDIKKSETEDVVDHSIEKKIEEPK 2601
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ 291
+ + S + E + S+ + +
Sbjct: 2602 RSEKKDLDKEFLEEKELKASAKKQGDQDIEQKSQKPEVSEVVAEKISEGKIEEPKKPEEM 2661
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+ + + L + Q V + E +
Sbjct: 2662 DTEAKSEKATVLDKQVLEEKELEASAEKQGDQDVEK--------KSQKPEVSEVVAEKIS 2713
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
V T + ++++ + ++ + QK ++E
Sbjct: 2714 EETIEEPKKPEVKDTEIKSEKATALDKQVLEEKELEASAQKQCDQDVEKKSQKPE--VSE 2771
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ A +K I+ K ++ D ++ ++ + EK L+ S++ + Q E S+
Sbjct: 2772 IVAEKISEKTIEE-PKKPEVKDTEIKSEKATALDKQVLEEKELEASAQKQGDQDVEKKSQ 2830
>gi|190702394|gb|ACE75286.1| kinesin-like protein KIF3A [Glyptapanteles flavicoxis]
Length = 676
Score = 39.6 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 71/170 (41%), Gaps = 10/170 (5%)
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR-RV 358
+ D ++L+ + I Q + + + S + DE + +++ +
Sbjct: 348 KNRARINEDPKDALLRQFQDEIEQLRKQLEENGEELSDSEGDTDESNPAEDESNSRKLKR 407
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI-- 416
+ I+ + IEV++E++ A + + P +K +++ +K N LR +
Sbjct: 408 KSQILTMEELDDKEIEVSQEKIDKA--EYTDKSP-DDKDVIE-LKKTQNEKEVLREKMQN 463
Query: 417 FEDKVI---DHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETF 463
++K++ +++L+ ++ +R + + + + E+L + E
Sbjct: 464 LQNKILVGGENLLEKAEVQERLLAASAIELDQRKKREEQLKKAIEEKEAE 513
>gi|190702488|gb|ACE75374.1| kinesin-like protein KIF3A [Glyptapanteles indiensis]
Length = 676
Score = 39.2 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 71/170 (41%), Gaps = 10/170 (5%)
Query: 300 YISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKR-RV 358
+ D ++L+ + I Q + + + S + DE + +++ +
Sbjct: 348 KNRARINEDPKDALLRQFQDEIEQLRKQLEENGEELSDSEGDTDESNPAEDESNSRKLKR 407
Query: 359 LTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI-- 416
+ I+ + IEV++E++ A + + P +K +++ +K N LR +
Sbjct: 408 KSQILTMEELDDKEIEVSQEKIDKA--EYTDKSP-DDKDVIE-LKKTQNEKEVLREKMQN 463
Query: 417 FEDKVI---DHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETF 463
++K++ +++L+ ++ +R + + + + E+L + E
Sbjct: 464 LQNKILVGGENLLEKAEVQERLLAASAIELDQRKKREEQLKKAIEEKEAE 513
>gi|156397342|ref|XP_001637850.1| predicted protein [Nematostella vectensis]
gi|156224966|gb|EDO45787.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 39.2 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 21/243 (8%), Positives = 69/243 (28%), Gaps = 2/243 (0%)
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
H K + + + P ++ K +
Sbjct: 161 HDENASTSKLSTFSSDVNKRTKPPDEKDIKISQLQQQINDLIMFLEEERLNHKSNIRKTA 220
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ + + E E+E N + + + A++ + E
Sbjct: 221 ENHHRHIEKIHEEHHEHIGSIEQDHEDEINKMKESFDRRETVASEMDYKWQRRENELKHE 280
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNAL 409
+ M + + + ++ +E Q + + + ++++ F +
Sbjct: 281 HKMSTEEALGQQRKELIHEKNKELDGLNKEHQRQIETIVEQHGKEIDRLMEKFAECVQDS 340
Query: 410 AELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAP 469
L+ + E +V+ ++ + ++ + ++ +K + + E F + A
Sbjct: 341 ENLKKVLTEMQVMT--KENASLKEKLKSTSDKLRKTTVELEDKKVKLAGYEEHFAEKVAE 398
Query: 470 SEI 472
+
Sbjct: 399 VDN 401
>gi|320544022|ref|NP_001188954.1| Stretchin-Mlck, isoform O [Drosophila melanogaster]
gi|318068624|gb|ADV37200.1| Stretchin-Mlck, isoform O [Drosophila melanogaster]
Length = 9354
Score = 39.2 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 58/407 (14%), Positives = 138/407 (33%), Gaps = 15/407 (3%)
Query: 73 EIVPEILSKRDER--AAMRPSITINEGESD--ITSGLIEGTVDLKLRLSYDILPQIEISS 128
E +I+ +++ AA + E D I + E K L + L + E+ +
Sbjct: 2561 EEFKQIIESQNQNKDAAGDIKKSETEDVVDHSIEKKIEEPKRSEKKDLDKEFLEEKELKA 2620
Query: 129 FDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILED 188
Q QDI + +K ++ + E + E+ + + +D +LE+
Sbjct: 2621 SAKKQGDQDIEQKSQKPEVSEVVAEKISEGKIEEPKKPEEMDTEAKSEKATVLDKQVLEE 2680
Query: 189 QSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIE-RFFPEDHSIKDLAGKKVRLNFSIK 247
+ + G D+ ++ + V ++ E P+ +KD K + K
Sbjct: 2681 KELEASAEKQGDQDVEKKSQKPEVSEVVAEKISEETIEEPKKPEVKDTEIKSEKATALDK 2740
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
+V + + E +S + ++ SE + + K ++ D
Sbjct: 2741 QVLEEKELEASAQKQCDQDVEKKSQKPEVSEIVAEKISEKTIEEPKKPEVKDTEIKSEKA 2800
Query: 308 DVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTI 367
+ V E + +KSQ + + + + V T
Sbjct: 2801 TALDKQVLEEKELEASAQKQGDQDVEKKSQKPEVSEVVAEKISEETIEEPKKPE-VKETE 2859
Query: 368 GEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILK 427
+ V ++++ + ++ + FQK + + +K+ + ++
Sbjct: 2860 VKSEKATVLDKQVLEEKELEASAQKQGDQDVEKKFQKAE------VSEVVAEKISEETIE 2913
Query: 428 SVQ---IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ + D ++ ++ + EK L+ S++ + Q E S+
Sbjct: 2914 EPKKPEVKDTEIKSEKATALDKQVLEEKELEASAQKQGDQDVEKKSQ 2960
Score = 37.7 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 45/420 (10%), Positives = 119/420 (28%), Gaps = 16/420 (3%)
Query: 52 SHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVD 111
H+ Y K I + I+ + +++ + +PS+ + + + + TV
Sbjct: 2427 EHVIQTYIKEIK---TNIILTKAAIQLIDDSNL--FTKPSLLVPKLVNLEKLSELTQTVK 2481
Query: 112 LKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD 171
L + S +++ + + + + E EK + ++ E + +
Sbjct: 2482 LIDKSSKEMIGLQQNLMDIFIILDDLLDERTEKINPKIENIKKILLSEYDYIEKKEGQLN 2541
Query: 172 KVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
V+ + + + D ++ Q I +I E+
Sbjct: 2542 TAVVNGKIKLITEKILDICEEFKQIIESQNQNKDAAGDIKKSETEDVVDHSIEKKIEEPK 2601
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ 291
+ + S + E + S+ + +
Sbjct: 2602 RSEKKDLDKEFLEEKELKASAKKQGDQDIEQKSQKPEVSEVVAEKISEGKIEEPKKPEEM 2661
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+ + + L + Q V + E +
Sbjct: 2662 DTEAKSEKATVLDKQVLEEKELEASAEKQGDQDVEK--------KSQKPEVSEVVAEKIS 2713
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
V T + ++++ + ++ + QK ++E
Sbjct: 2714 EETIEEPKKPEVKDTEIKSEKATALDKQVLEEKELEASAQKQCDQDVEKKSQKPE--VSE 2771
Query: 412 LRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ A +K I+ K ++ D ++ ++ + EK L+ S++ + Q E S+
Sbjct: 2772 IVAEKISEKTIEE-PKKPEVKDTEIKSEKATALDKQVLEEKELEASAQKQGDQDVEKKSQ 2830
>gi|319778501|ref|YP_004129414.1| Survival protein SurA precursor [Taylorella equigenitalis MCE9]
gi|317108525|gb|ADU91271.1| Survival protein SurA precursor [Taylorella equigenitalis MCE9]
Length = 491
Score = 39.2 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 49/135 (36%), Gaps = 5/135 (3%)
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGI 362
+ V +L +N IL V E+ + + ++++ + + ++
Sbjct: 26 KQVKNQVKHTLSKNATEQILAVVNDEVITMGDFASRLNTLRISGQHFSDEAVLQSLIDEK 85
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKML----DHFQKYPNALAELRAPIF- 417
++ T ++ + V+++ + A+ + ++M + + L +R I
Sbjct: 86 LMDTFAKERGLTVSDQRVAQAIQNIAAQNGLTPEQMKAASSQYNINWDEYLKNIRQQILI 145
Query: 418 EDKVIDHILKSVQIV 432
ED I + I
Sbjct: 146 EDLKAAIIRDRINIT 160
>gi|327281562|ref|XP_003225516.1| PREDICTED: hypothetical protein LOC100561123 [Anolis carolinensis]
Length = 2290
Score = 39.2 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 20/289 (6%), Positives = 79/289 (27%), Gaps = 8/289 (2%)
Query: 150 MAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTE 209
+ E + A+ + + ++ + + ++
Sbjct: 39 LKEEFDLHDAWRYHNQNKRDYTFYSDRHKTWARIDMIWLSNSLCTRTEEIKIQPRDKSDH 98
Query: 210 ILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES 269
+ + ++ ++ +++ +K A + + + +
Sbjct: 99 CPITISINKRRNSYKWRMDENLLKLEADINKNKKLAKEFFEFNNKPDIKEQIMWDAFKAV 158
Query: 270 ESA--MRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRF 327
++ + K++ E K + + + + +
Sbjct: 159 MRGHLLQQKVEKNRKKYKEIEDIMKTIGGLEEQLKKYPLDTDKTKELNFWKSKKTTLELE 218
Query: 328 EMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEM----QSA 383
M+ + + + + + R+ + I + VT+EE+ +
Sbjct: 219 NMAKQLKYIKQHNFENANKPGTWLARKLRKKKQQQYISKITREGKTYVTDEEILEVSREF 278
Query: 384 LYQQLGRFPGHEKKMLDHF--QKYPNALAELRAPIFEDKVIDHILKSVQ 430
+ + K+ + + P + R + + I+ I K+++
Sbjct: 279 FEELYKKEEVDPDKISQYLGELQLPKITEQQRESLNREITIEEIRKTLK 327
>gi|284035738|ref|YP_003385668.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale
DSM 74]
gi|283815031|gb|ADB36869.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Spirosoma linguale
DSM 74]
Length = 458
Score = 39.2 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 372 NIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQI 431
+ ++ + E+ S + + +F + + + + +ELR+ + + KV+ + + +
Sbjct: 89 DDKIVDSELDSRMQYMVQQFGSDKNIVEAYGKSLEMLKSELRSQVKDQKVVQKMQQKIT- 147
Query: 432 VDRKVTFDQL 441
D KVT +
Sbjct: 148 TDVKVTPRDV 157
>gi|297842972|ref|XP_002889367.1| hypothetical protein ARALYDRAFT_887310 [Arabidopsis lyrata subsp.
lyrata]
gi|297335209|gb|EFH65626.1| hypothetical protein ARALYDRAFT_887310 [Arabidopsis lyrata subsp.
lyrata]
Length = 663
Score = 39.2 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 27/397 (6%), Positives = 82/397 (20%), Gaps = 32/397 (8%)
Query: 89 RPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDR 148
P ++ +PQ +
Sbjct: 126 YPEPFPYGMYPTASNPPHVPAYRDPYGFPVHRVPQNFYQGPGHYPNQMPPRPPYPQGQYV 185
Query: 149 QMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETT 208
+ + + + V + + + + G +
Sbjct: 186 DIGSDILDTQLQDPRFFPGTPSRYGDVPLSPTKHHGEKVGP-FSPHAGVQGHHTRWPSDI 244
Query: 209 EILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFE 268
+ +G + D R
Sbjct: 245 DSDMGGAFARGYVQKTVSDTDSRRYHPLAGGAPFIACHNCFELLYVPKKKLLGQERQQKL 304
Query: 269 SESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFE 328
A + S K+ + ++V++ + +
Sbjct: 305 QCGACSEVISFKVVDKKLVFSSSALGETTNRVSVEVEDRSARNAVVDDYPLKDEEIRIHQ 364
Query: 329 MSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEE---------- 378
K + E R +V +V+
Sbjct: 365 ----ETKIVHAGLRSEHSDDEDRSSISSRPQKQVVKSVRSRAQGAKVSPPPPPPEKSNLL 420
Query: 379 EMQSA--LYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKV 436
E+ + + + ++ + K + + + D + + V
Sbjct: 421 ELFEYSNVNRAAITYGM--AQL--GYNKQESYMKQ-----------DSLKSESVATETDV 465
Query: 437 TFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
++++ ++N+ ES ++ + + ++ + SE S
Sbjct: 466 SYNEYYNNTEESEDSRISKANKEERRPRNRKQSSEYS 502
>gi|238786686|ref|ZP_04630487.1| Chaperone surA [Yersinia frederiksenii ATCC 33641]
gi|238725054|gb|EEQ16693.1| Chaperone surA [Yersinia frederiksenii ATCC 33641]
Length = 434
Score = 39.2 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 26/78 (33%)
Query: 351 HMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA 410
R++ +L + +K I V++E + A+ + +M
Sbjct: 67 RHQVLERLIMDNILLQMAKKMGITVSDEALDKAIADIAAQNRMTPDQMRSRLAADGLNYN 126
Query: 411 ELRAPIFEDKVIDHILKS 428
R I ++ + + +
Sbjct: 127 TYREQIRKEMLTSEVRNN 144
>gi|78357080|ref|YP_388529.1| peptidyl-prolyl cis-trans isomerase domain-containing protein
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78219485|gb|ABB38834.1| peptidyl-prolyl cis-trans isomerase domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 329
Score = 39.2 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 43/119 (36%), Gaps = 8/119 (6%)
Query: 343 DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF 402
D ++ ++ ++ E+ N+ + + + L L R E +++
Sbjct: 81 DAAAIKKIESETLEDMIVDRLMVQEAERYNLGADDAAVDNELRSLLARMQITEDQLVAQL 140
Query: 403 QKYPNALA----ELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+ L +R I K++ ++ ++V VT + E E + DKS
Sbjct: 141 KSEGQDLDFYRGLIRNNIMRQKLLSFMVSR-KVV---VTRQDIEAYYEEHKNEYMQDKS 195
>gi|221503729|gb|EEE29413.1| trichohyalin, putative [Toxoplasma gondii VEG]
Length = 2088
Score = 38.8 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 29/295 (9%), Positives = 92/295 (31%), Gaps = 11/295 (3%)
Query: 187 EDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSI 246
+ + G + + E +++E ++ E+ K A +K
Sbjct: 341 NEWKMHRAEMEKGKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVKEERK 400
Query: 247 KEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ-----KVKRQILDYI 301
K ++ + E+ +K++Q E + K K++ ++
Sbjct: 401 KLEEERNEWKMHRAEMEKGKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGKQEAIEKA 460
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ + + E + + ++ + + + +++E ++ A+
Sbjct: 461 VKEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGKQ 520
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP-----I 416
+ ++ + EEE + G ++ + ++ + + R
Sbjct: 521 EAIEKAVKEER-KKLEEERNEWKMHRAEMEKGKQEAIEKAVEEERKKMEQEREEWQKHRA 579
Query: 417 FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
E+K ++ +RK + + + E+ + + + + E E
Sbjct: 580 EEEKGKQEAIEKAVKEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKME 634
Score = 38.5 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 27/351 (7%), Positives = 105/351 (29%), Gaps = 6/351 (1%)
Query: 127 SSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVIL 186
++ V + + K+++ + E + E + E+ + +
Sbjct: 317 RLEEEKGVLEKTLLEERKKLEEERNEWKMHRAEMEKGKQEAIEKAVEEERKKMEQEREEW 376
Query: 187 EDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSI 246
+ + + + + + + + + K + +
Sbjct: 377 QKHRAEEEKGKQEAIEKAVKEERKKLEEERNEWKMHRAEMEKGKQEAIEKAVEEERKKME 436
Query: 247 KEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVK--RQILDYISNK 304
+E + + E ++ ++ + ++ K ++ ++ +
Sbjct: 437 QEREEWQKHRAEEEKGKQEAIEKAVKEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVEE 496
Query: 305 YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVL 364
+ + E + + ++ + + + ++EE ++ A+ +
Sbjct: 497 ERKKMEQEREEWQKHRAEEEKGKQEAIEKAVKEERKKLEEERNEWKMHRAEMEKGKQEAI 556
Query: 365 GTIGEKNNIEVTEEE---MQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL-RAPIFEDK 420
E+ ++ +E + ++ G+ EK + + +K E + E+K
Sbjct: 557 EKAVEEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVKEERKKMEQEREEWQKHRAEEEK 616
Query: 421 VIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
++ +RK + + + E+ + + + + E E
Sbjct: 617 GKQEAIEKAVEEERKKMEQEREEWQKHRAEEEKGKQEAIEKAVEEERKKME 667
>gi|285019522|ref|YP_003377233.1| ppic-type peptidyl-prolyl cis-trans isomerase [Xanthomonas
albilineans GPE PC73]
gi|283474740|emb|CBA17239.1| probable ppic-type peptidyl-prolyl cis-trans isomerase protein
[Xanthomonas albilineans]
Length = 455
Score = 38.8 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 7/98 (7%), Positives = 27/98 (27%), Gaps = 5/98 (5%)
Query: 345 EDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQK 404
R++ + I V+++E+ A+ + +
Sbjct: 66 PPDNVLRRQVLERLVLVKLQVARANSTGIHVSDDELNRAIASIAQQNNTDVDGLRKKIAA 125
Query: 405 YPNALAELRAPIFEDKVID-----HILKSVQIVDRKVT 437
+ + R + ++ + + + + +V
Sbjct: 126 DGMSYDDFRNSVRDEITVQRLRQSFAQSRINVSESEVD 163
>gi|50083862|ref|YP_045372.1| hypothetical protein ACIAD0629 [Acinetobacter sp. ADP1]
gi|49529838|emb|CAG67550.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 490
Score = 38.8 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 22/230 (9%), Positives = 57/230 (24%), Gaps = 13/230 (5%)
Query: 57 LYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRL 116
Y +L+E + I+ PE L I + + D +L
Sbjct: 194 QYAPELLAEFTQKCIEWHYPEALQAEH---------PILAFAEGVIKNTAKMIADWQLVG 244
Query: 117 SYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETES----EIGDK 172
+ + + + E+ + + + + + S +
Sbjct: 245 FAHGVMNTDNLNITGSTLDFGPYGFMERFRPNWINNHSDHQGRYAYQNQPSIAHWNLWIW 304
Query: 173 VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
+ +S + + + TE L + F +
Sbjct: 305 LNNLIPLSKPEDKETFKKQLADCLEHFEPTFLTAYTEGLCKKLGLPDFHKDSFDCGMAFL 364
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIK 282
K L +++ S + + + +D F+ + +
Sbjct: 365 KVLQSEQLDYTQSFLRLQNHDYKALRDDCLDTRQFDDFLNLYHQIREHQD 414
>gi|156544261|ref|XP_001606941.1| PREDICTED: similar to conserved hypothetical protein [Nasonia
vitripennis]
Length = 511
Score = 38.8 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 26/206 (12%), Positives = 61/206 (29%), Gaps = 11/206 (5%)
Query: 250 FSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDV 309
LP + + + + ++ + + + + +
Sbjct: 239 CKELPAESSFVESTLTSPRTPEKKESSLVDSGHFEDGSVHSKESTDHAEERLESSFQDEE 298
Query: 310 PESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG-IVLGTIG 368
+ +V++ N I + R + QN + E L ++ R T +
Sbjct: 299 RKRIVDHYENRIEEMHRRHVDEIQLLKQNHNDKVESLLNQLSEVSTRYCETRPSLNAAET 358
Query: 369 EKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF---QKYPNALAELRAPIFEDKVIDHI 425
+E E ++S L +Q E++ + A + D +
Sbjct: 359 RTKELETEVEALRSELAEQKAMLADQEERNKQMYLKMYSKGQEAARIEHA-------DQV 411
Query: 426 LKSVQIVDRKVTFDQLFDNSSESSPE 451
L+ Q KV+ +L + + E
Sbjct: 412 LEQAQKNPTKVSVAELLQQLTVTQAE 437
>gi|118363847|ref|XP_001015147.1| hypothetical protein TTHERM_01028850 [Tetrahymena thermophila]
gi|89296914|gb|EAR94902.1| hypothetical protein TTHERM_01028850 [Tetrahymena thermophila SB210]
Length = 3545
Score = 38.8 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 35/340 (10%), Positives = 102/340 (30%), Gaps = 22/340 (6%)
Query: 111 DLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIG 170
+ SY I I+I + + I + I +VA+ + + +I
Sbjct: 2851 PCMIPFSYAIQLAIQILGPIFGILGLYKYKHLIYNIYFKQQYIYSKDVAYVGEIYQKQIT 2910
Query: 171 DKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDH 230
V + + + S +L + + E+
Sbjct: 2911 ITNDVRGLAKKLWIFFQKTIGEKEILRQLSKELMEKNQTTSYKYFNPKNRVQNLKNIEEE 2970
Query: 231 SIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMR-GLCSQKIKQHSEFLV 289
++ ++ +N + + V + + + +S + L + +++
Sbjct: 2971 EEDYISFEEEVINKMYPFGVNIDEIAVVDSQSKNIMMQSSQKFKLALKRELSARNNINQN 3030
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ---------NVD 340
+K + I+ YT + ++ + + Q ++ N + +
Sbjct: 3031 ENSLKLENSQPITEIYTTNFAKNNLIEQNQNHFQSKKYITKQKNNLNDSNINSKSVADSI 3090
Query: 341 SIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLD 400
D ++Q H+ + + + N ++ + + Q+ P + +
Sbjct: 3091 RCDLLEMQSQHIKMDQSKVNDLAGNEYNLFQNGQINFLSILQFIKQKQENLPEKNRIL-- 3148
Query: 401 HFQKYPNALAE--LRAPIFEDKV----IDHILKSVQIVDR 434
L +R + V +D++++ +I +
Sbjct: 3149 ----NKKQLESLLIRNSVLSQAVCCYFVDYLIEKDKITKK 3184
>gi|291545599|emb|CBL18707.1| hypothetical protein CK1_03810 [Ruminococcus sp. SR1/5]
Length = 1833
Score = 38.8 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 24/236 (10%), Positives = 69/236 (29%), Gaps = 20/236 (8%)
Query: 227 PEDHSIKDLAGKKV---RLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQ 283
+D + +AGK + F+ V + + + + +
Sbjct: 1088 QKDTWEETMAGKNESGTDVRFNFHAVSEVQLPEGIKLKMPEIHYVDNFYVMEDINAEGVV 1147
Query: 284 HSEFLVR----QKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNV 339
+ ++ ++ E++ E+ + +++ A ++
Sbjct: 1148 KVNRYESLDEAMQEYLRLPNHQEKVLGIQNTETMQESMDFIRCENGIDQLTHAYEQIGGW 1207
Query: 340 DSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKML 399
+ + + I + I+ E+ + ++
Sbjct: 1208 LNPEIYEAVNKMENMLDWNEVQIAYQIGKQYFTIQTAEDGYDYTF------YNEDYQEDD 1261
Query: 400 DHFQKYPN-ALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLL 454
P + E + I EDK + L+ ++VD +++L + E E++
Sbjct: 1262 GGIYDNPTIYVDEAASDILEDK--GYSLEDAKVVD----YEELMADVEEVQEEQMQ 1311
>gi|224009842|ref|XP_002293879.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970551|gb|EED88888.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 220
Score = 38.8 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 8/100 (8%)
Query: 22 NRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILSK 81
+ + ++ KAN GFR G++P + I E + + + L
Sbjct: 92 EEIKKLRMQTEKEASKKANFPGFRKGQIPP-----YAQPRMTMFAIQEAVIKTCEQSLEA 146
Query: 82 RDERAA--MRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ +T+NE + + D++ +Y
Sbjct: 147 YGLESLQGSEGEVTVNEDMQQVCK-TYKLGTDIEFTATYK 185
>gi|73999893|ref|XP_859857.1| PREDICTED: similar to Microtubule-associated protein 1A (MAP 1A)
(Proliferation-related protein p80) isoform 2 [Canis
familiaris]
Length = 3018
Score = 38.8 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 84/276 (30%), Gaps = 7/276 (2%)
Query: 190 SKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEV 249
+++ + +L T + + +++ + + K + K +
Sbjct: 1558 EGIAMEWESKAPELKDRTPDQRDKAPEPKDEVLQQDKTLEQKDIFVEQKDTTIGQKDKAL 1617
Query: 250 FSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDV 309
+ D A+ + ++ + E ++ + +K +
Sbjct: 1618 EEKNKAIEQQDKALEQKGRDLEQRDTVLLEQKDKALELKDEHLEQKDKVLAEEDKIPEEK 1677
Query: 310 PESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGE 369
E+L + + + E K + + DE Q A + + +
Sbjct: 1678 DETLEQKVRDIEYKDKTPEDKVPELKGKALGQTDEVLEQKDKAHALKDKTLEQKDTDLEQ 1737
Query: 370 KNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSV 429
K + E+E + L E+K QK ++A +DK ++
Sbjct: 1738 KGKAQGQEDEALEKKDEAL------EQKYWALGQKDEALEPNIKAVEQKDKALED-KDKT 1790
Query: 430 QIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
Q + V D+ + EK +K+ V+ +
Sbjct: 1791 QEQESPVQEDKTMKPKEKVLEEKSPEKAEAVQQKEE 1826
>gi|224532431|ref|ZP_03673058.1| trigger factor [Borrelia burgdorferi WI91-23]
gi|224512641|gb|EEF83015.1| trigger factor [Borrelia burgdorferi WI91-23]
Length = 85
Score = 38.8 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 364 LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID 423
+ + + + I+VTE +++ + +Q +++ + + N ++ L+ I ++
Sbjct: 1 MQKMVDLDPIKVTESDVEDEMARQSKNLGVSYEEIKKFY-EDQNLISYLKDDIKRERAKK 59
Query: 424 HILKSVQ-IVDRKVTFDQLFD 443
IL++++ + +K+ F +
Sbjct: 60 KILENLKEVKGKKLNFRDFVN 80
>gi|118346169|ref|XP_977170.1| hypothetical protein TTHERM_00037700 [Tetrahymena thermophila]
gi|89288330|gb|EAR86318.1| hypothetical protein TTHERM_00037700 [Tetrahymena thermophila SB210]
Length = 4743
Score = 38.8 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 40/355 (11%), Positives = 121/355 (34%), Gaps = 19/355 (5%)
Query: 128 SFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILE 187
Q + + ++ +NN+ + K+ + D +S ++
Sbjct: 1789 EKTKQQDKMNDLNAKIDSLQNKIRNDQENNLKEKDKKENQKDNDIKEHQKKISQTKQLIN 1848
Query: 188 DQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIK 247
+S + Q + L +E + E G +
Sbjct: 1849 QKSIRINQIYQIKMRNIEWLEDYDEYLIKKALQEEKGEINE---YNPNQGDVQEFAVNTI 1905
Query: 248 EVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTF 307
V + + +L +SE ++ K+ + +++ + + +
Sbjct: 1906 HVRNRQLIQHPGQEENQLFIQSEEDYDSEWERQQKEEEKQYIKEIQQIFNENRDIDSEIN 1965
Query: 308 DVPESLVE-----NEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGI 362
+ + + + + +Q + + + ++ ++ +E+ + + K I
Sbjct: 1966 KIEQEIYQLEDQIIQTEQYIQDIENQYARNIEQLDKQNTSKKEEEEIVILQKKYENEKDI 2025
Query: 363 VLGTIGEKNNIEVTEEEMQSALY---QQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED 419
T+ + + +EE+++ + + + ++ + ++ F+ L ++D
Sbjct: 2026 YDETVNKISEYMAQQEEIENEIKQNDENINQYINDNQYYMEEFKSSQKVL----NKAYQD 2081
Query: 420 KVIDHILKSVQIVDRKVTFDQL---FDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
K I++ K + ++K+ F+Q + + E+L KS + E + ++A E
Sbjct: 2082 K-IEYHEKIDDLQEKKIKFEQYLIDLEQRYKIISEELKKKSKQDEDKEKQKAKIE 2135
>gi|238764654|ref|ZP_04625599.1| Chaperone surA [Yersinia kristensenii ATCC 33638]
gi|238697146|gb|EEP89918.1| Chaperone surA [Yersinia kristensenii ATCC 33638]
Length = 424
Score = 38.8 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 12/124 (9%), Positives = 38/124 (30%)
Query: 305 YTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVL 364
+V + + +LQ + + + + + D R++ +
Sbjct: 11 APQEVDKVAAVVDNGVVLQSDVDGLLQSVKLNAQQAGQEVPDDATLRHQILERLIMDNIQ 70
Query: 365 GTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDH 424
+ +K I +++E + A+ + +M R I ++ +
Sbjct: 71 LQMAKKMGITISDEALDKAIADIAAQNRMTPDQMRSRLAADGLNYDTYREQIRKEMLTSE 130
Query: 425 ILKS 428
+ +
Sbjct: 131 VRNN 134
>gi|7522250|pir||T40203 conserved hypothetical protein SPBC31E1.06 - fission yeast
(Schizosaccharomyces pombe) (fragment)
Length = 838
Score = 38.8 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 81/258 (31%), Gaps = 10/258 (3%)
Query: 218 DQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLC 277
D + E ++ K +N + + + + A + G
Sbjct: 399 DTVDRESSEIDNVGRKTRRQPTGLINQELIKEDEGAFDDSDVNSADENEDVDFTGKIGAI 458
Query: 278 SQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ 337
+ + + +E + + ++ + + + ++ + + +
Sbjct: 459 NNEDESDNEEVAFADSDSDLGGQFDDEDSNLRWKEGLASKAALAYSQSGKRRRNIQKIFY 518
Query: 338 NVDSIDEEDLQYYHMLAKRRVLTGIV--LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHE 395
+ ++ Y + + + +V +V E + S + + E
Sbjct: 519 DESLSPKDAYAEYKGESAKSSESDLVVSDDEEDFFKVSKVANESISSNHEKLM----ESE 574
Query: 396 KKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV--DRKVTFDQLFDNSSESSPEKL 453
L + P LA+L++ ++D I ++ D + F+ L E+S +
Sbjct: 575 SDRLSKKWENPQLLAQLKSRFITGSLLDSIEGQEEVSQDDEEGDFEDL--EDEENSSDNE 632
Query: 454 LDKSSKVETFQSEEAPSE 471
+++SS E ++
Sbjct: 633 MEESSGSSVTAENEESAD 650
>gi|155042946|ref|YP_001425613.1| TMP repeat protein [Bacillus virus 1]
gi|115529850|gb|ABJ09629.1| TMP repeat protein [Bacillus virus 1]
Length = 955
Score = 38.5 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 22/219 (10%), Positives = 65/219 (29%), Gaps = 6/219 (2%)
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
++ G + L +++EV + V + + +QK + ++ +
Sbjct: 11 EIGGNTIGLQKALQEVNQKSRELSKELRDVERLLKFDPGNVEAVAQKQQILAKQIETTTE 70
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
K L ++ + + + R E+ + +
Sbjct: 71 KLNQLRAAQSQVEEQFHKGEI---GEQQYRNFRREIEYTEAQLNKYKQSLQALKDEQEAA 127
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELR 413
+ G+ + + + S L + ++ D K A +
Sbjct: 128 GAATQRLEALFKATGKSVDDFA--DTLGSKLVNAIKSGKASSTQLEDALDKIGQAALGVN 185
Query: 414 API-FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPE 451
A + + +D + ++ K D++ +S++ +
Sbjct: 186 ADLDKMRQALDQLASGAKLDKVKKDLDEIAKAASDAEKD 224
>gi|148695270|gb|EDL27217.1| titin [Mus musculus]
Length = 33941
Score = 38.5 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 52/499 (10%), Positives = 133/499 (26%), Gaps = 52/499 (10%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPL----SHI--- 54
+V + +++ +P E I ++ KVP +
Sbjct: 9997 KVQVIKVPEVSKKI---VPQKPSRTPVQEEIIEV------------KVPAVHTKKMVISE 10041
Query: 55 KSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKL 114
+ ++ S E + + E+ + +++ A+ I + + V
Sbjct: 10042 EKMFFASHTEEEVSVSVPEVQKKTVTEEKIHVAVSKKIEPPPKVPEPPKKPVPEEVVPVP 10101
Query: 115 RLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVT 174
P ++ V ++ V + A + E
Sbjct: 10102 IPKKVEPPAAKVPEAPKKPVPEEKKPVPIPKKKEPAAPPQVPEAPKKPAPEEKIPVPVTK 10161
Query: 175 VDY--TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSI 232
V V + +++ + I + + K ++K E
Sbjct: 10162 KKEAPPAKVPEVQKKVVTEEKIAIITQREESPPPAVPEIPKKKVPEEKRPVPRKEEVPPP 10221
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGL------------CSQK 280
K K + ++ P +++ + E + +
Sbjct: 10222 KVPVPPKKAVPEAVVPAPIPKKAPPRAEVSKKTVVEEKRFAAEEKLSVAVPQRVELMRHE 10281
Query: 281 IKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVD 340
++ + ++V + E + +
Sbjct: 10282 EEEWTYSEEEERVSVSVYREEERDEEEAEITEYEVLEEPEEYVVEEKMHFISKKVEVEPA 10341
Query: 341 SIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEE--MQSALYQQL---GRFPGHE 395
+ E + V + ++++T+EE + + ++ R P
Sbjct: 10342 KVPEPPKKIVPEKKVPAPAPKKVPPAKVAERHMKITQEEKVLVAVTKKEAPPRARVPEEP 10401
Query: 396 KKMLDHFQKYPNALAELRAPIFED---KVIDHILKSVQIVDRKVTFDQLFDNSSESSPEK 452
KK+ +L+ E+ KV + + K + + KV+ ++ + E
Sbjct: 10402 KKVA-----PEERFPKLKPRREEEPPAKVTE-VRKRA-VKEEKVSI-EVPKREPRPTKEV 10453
Query: 453 LLDKSSKVETFQSEEAPSE 471
+ + K + EE SE
Sbjct: 10454 TVTEEKKWSYTREEETVSE 10472
>gi|301611855|ref|XP_002935455.1| PREDICTED: RAS protein activator like-3-like [Xenopus (Silurana)
tropicalis]
Length = 944
Score = 38.5 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 385 YQQLGRFPGHEKKMLDHFQKYPNALAELRAPI--FEDKVIDHILKSVQIVDRKVTFDQLF 442
++ ++M + +L I ++ + + + ++ + + TF +
Sbjct: 798 AEEAVNQEKQLQEMRGQILENQGKQKDLEGQIGILSGQIQEMLGQLAKVEETQRTFQEEM 857
Query: 443 DNSS-------ESSPEKLLDKSSKVETFQSEEAP 469
++ EK L K + V +E
Sbjct: 858 AGQVSLILNRIKALEEKKLPKENSVAENPAENIE 891
>gi|63054700|ref|NP_595102.2| GTP binding protein Bms1 [Schizosaccharomyces pombe 972h-]
gi|27151472|sp|O94653|BMS1_SCHPO RecName: Full=Ribosome biogenesis protein BMS1 homolog
gi|157310385|emb|CAB39140.2| GTP binding protein Bms1 [Schizosaccharomyces pombe]
Length = 1121
Score = 38.5 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 81/258 (31%), Gaps = 10/258 (3%)
Query: 218 DQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLC 277
D + E ++ K +N + + + + A + G
Sbjct: 399 DTVDRESSEIDNVGRKTRRQPTGLINQELIKEDEGAFDDSDVNSADENEDVDFTGKIGAI 458
Query: 278 SQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQ 337
+ + + +E + + ++ + + + ++ + + +
Sbjct: 459 NNEDESDNEEVAFADSDSDLGGQFDDEDSNLRWKEGLASKAALAYSQSGKRRRNIQKIFY 518
Query: 338 NVDSIDEEDLQYYHMLAKRRVLTGIV--LGTIGEKNNIEVTEEEMQSALYQQLGRFPGHE 395
+ ++ Y + + + +V +V E + S + + E
Sbjct: 519 DESLSPKDAYAEYKGESAKSSESDLVVSDDEEDFFKVSKVANESISSNHEKLM----ESE 574
Query: 396 KKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIV--DRKVTFDQLFDNSSESSPEKL 453
L + P LA+L++ ++D I ++ D + F+ L E+S +
Sbjct: 575 SDRLSKKWENPQLLAQLKSRFITGSLLDSIEGQEEVSQDDEEGDFEDL--EDEENSSDNE 632
Query: 454 LDKSSKVETFQSEEAPSE 471
+++SS E ++
Sbjct: 633 MEESSGSSVTAENEESAD 650
>gi|239906716|ref|YP_002953457.1| putative peptidyl-prolyl cis-trans isomerase [Desulfovibrio
magneticus RS-1]
gi|239796582|dbj|BAH75571.1| putative peptidyl-prolyl cis-trans isomerase [Desulfovibrio
magneticus RS-1]
Length = 371
Score = 38.5 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 39/101 (38%), Gaps = 5/101 (4%)
Query: 341 SIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLD 400
D+ L ++T +++ + K + V++ E+ S + + + +++ +
Sbjct: 102 KPDDPRLDDLRRQVLESMITDMLIESEANKLKVTVSDTEIDSQIEEIKKKNNLSQQQFVT 161
Query: 401 HFQKYPNALAELRAPIFEDKVIDHILK-----SVQIVDRKV 436
K L + R + D + +L V + D ++
Sbjct: 162 ELAKEGLTLKQFRDKMRLDSIKKRLLGFMVHRKVLVTDDEI 202
>gi|115631493|ref|XP_795879.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115966376|ref|XP_001181577.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 448
Score = 38.5 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 11/128 (8%)
Query: 345 EDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSAL-YQQLGRFPGHEKKMLDHFQ 403
+ A+ ++ + AL + L R P K + +
Sbjct: 75 PYGEALRDKAELPGTVSTAEEKDATPEELKYNVADGTRALSAETLMRMPQPSKAYVSNV- 133
Query: 404 KYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETF 463
+R + E K + I++ + +++ + + N E + + SK
Sbjct: 134 -------RMRRLMKEFKAVTKIIEEARKKEQE--EKERYANDEEEDTDPPKEDVSKEVVS 184
Query: 464 QSEEAPSE 471
+E+ SE
Sbjct: 185 SKDESQSE 192
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 38.5 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 62/230 (26%), Gaps = 5/230 (2%)
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
N + + + + I + +++K +
Sbjct: 184 NSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSKFEEMKANFTNIYV 243
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGI 362
DV + + + +S N+ ++ + A
Sbjct: 244 KNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAA----VEA 299
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLG-RFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
+ + + V + + ++L ++ + +Q + L I ++K+
Sbjct: 300 LNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKL 359
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSE 471
+ I KV + + D +E+ K DK E E E
Sbjct: 360 RELFSSYGNITSAKVMREAIVDVPAETEKGKEADKEKAKEAGDKSEEKGE 409
>gi|33322021|gb|AAQ06729.1|AF496073_1 trigger factor [Lactobacillus delbrueckii subsp. lactis]
Length = 67
Score = 38.5 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 203 LFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLA 262
+ LVG G++ ++ FPED+ KDLAGK+ I EV + ++++ A
Sbjct: 1 FIPGFEDQLVGHGAGEEVDVVVTFPEDYGAKDLAGKEAHFATKIHEVKAKQLPELDDEFA 60
Query: 263 V 263
Sbjct: 61 K 61
>gi|73999891|ref|XP_535449.2| PREDICTED: similar to Microtubule-associated protein 1A (MAP 1A)
(Proliferation-related protein p80) isoform 1 [Canis
familiaris]
Length = 2794
Score = 38.1 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 84/276 (30%), Gaps = 7/276 (2%)
Query: 190 SKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEV 249
+++ + +L T + + +++ + + K + K +
Sbjct: 1334 EGIAMEWESKAPELKDRTPDQRDKAPEPKDEVLQQDKTLEQKDIFVEQKDTTIGQKDKAL 1393
Query: 250 FSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDV 309
+ D A+ + ++ + E ++ + +K +
Sbjct: 1394 EEKNKAIEQQDKALEQKGRDLEQRDTVLLEQKDKALELKDEHLEQKDKVLAEEDKIPEEK 1453
Query: 310 PESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGE 369
E+L + + + E K + + DE Q A + + +
Sbjct: 1454 DETLEQKVRDIEYKDKTPEDKVPELKGKALGQTDEVLEQKDKAHALKDKTLEQKDTDLEQ 1513
Query: 370 KNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSV 429
K + E+E + L E+K QK ++A +DK ++
Sbjct: 1514 KGKAQGQEDEALEKKDEAL------EQKYWALGQKDEALEPNIKAVEQKDKALED-KDKT 1566
Query: 430 QIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQS 465
Q + V D+ + EK +K+ V+ +
Sbjct: 1567 QEQESPVQEDKTMKPKEKVLEEKSPEKAEAVQQKEE 1602
>gi|260889845|ref|ZP_05901108.1| trigger factor [Leptotrichia hofstadii F0254]
gi|260860451|gb|EEX74951.1| trigger factor [Leptotrichia hofstadii F0254]
Length = 58
Score = 38.1 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Query: 5 EKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSL 57
K E+ + L + A + GFRPG VP I+
Sbjct: 3 VKKLNESTYEVSAVREGEELKHLKEHVLVHF-KDAKVDGFRPGHVPAKVIEKN 54
>gi|327438758|dbj|BAK15123.1| parvulin-like peptidyl-prolyl isomerase [Solibacillus silvestris
StLB046]
Length = 282
Score = 38.1 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 44/114 (38%), Gaps = 10/114 (8%)
Query: 360 TGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA-ELRAPIFE 418
V+ + +VT+EE++ L ++ + +L L +R + +
Sbjct: 53 LQQVVVEQILNDKYKVTDEEIEEELKGVKEQYGESYEAVLAQSNLTEETLKTNIRFTLLQ 112
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEI 472
+K + D +VT +++ +++S E + ++E +++
Sbjct: 113 EKAL---------KDVEVTDEEIEKYYNQASQELNARHILVEDEETAKEIKAKL 157
>gi|325578269|ref|ZP_08148404.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae ATCC 33392]
gi|325160005|gb|EGC72134.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae ATCC 33392]
Length = 682
Score = 38.1 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 28/388 (7%), Positives = 100/388 (25%), Gaps = 51/388 (13%)
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
K I +E +++ + + + P + + + + + + + +
Sbjct: 104 KQITAEIYNKL---KAKDFIKTKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCE 160
Query: 120 IL-----------PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE 168
+ P+ +S + + D + + E ++ + +
Sbjct: 161 VCASTYSPMDLINPRSAVSGATPIIKESEHFFFDLPAFEGMLKEWTRSGSLQPEIANKMQ 220
Query: 169 IGDK-----VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIE 223
+ + + K + + + + + L + G
Sbjct: 221 EWFESGLQQWDISRDAPYFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCDRE-GIDFNEF 279
Query: 224 RFFPEDHSIKDLAGKKVR-LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIK 282
D + GK + + G+ + + S+
Sbjct: 280 WGENSDAELYHFIGKDIVYFHSLFWPAMLEGSEYRKPTNVFAHGYVTVDGAKMSKSRGTF 339
Query: 283 QHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI 342
+ + + Y + K + + ++ +Q+V ++ + + ++
Sbjct: 340 IQASTYLNHIDPECLRYYYAAKLNDRIED--LDFNLEDFVQRVNTDIVNKLVNLASRNA- 396
Query: 343 DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF 402
G + K ++ +E + + Q + + +
Sbjct: 397 ------------------GFIAKRFEGKLADKLEDEALFAEFTAQAEQ--------IATY 430
Query: 403 QKYPNALAELRAPI-FEDKVIDHILKSV 429
+ +R + DK +I +
Sbjct: 431 YESREYNKAIREIMTLTDKANKYIDEKA 458
>gi|229816170|ref|ZP_04446480.1| hypothetical protein COLINT_03217 [Collinsella intestinalis DSM
13280]
gi|229808178|gb|EEP43970.1| hypothetical protein COLINT_03217 [Collinsella intestinalis DSM
13280]
Length = 401
Score = 37.7 bits (85), Expect = 3.8, Method: Composition-based stats.
Identities = 15/129 (11%), Positives = 48/129 (37%), Gaps = 4/129 (3%)
Query: 312 SLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKN 371
++ E+ + +R + + + Y + +L ++
Sbjct: 85 NIKEDTVTNQIMSLRTGSYDKDADWAAYLASQGLTPESYRENVIDGIARQYLLVEAEKEY 144
Query: 372 NIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQK----YPNALAELRAPIFEDKVIDHILK 427
I V++E++ A + + G EK ++ ++ L +++ + + K+ D +
Sbjct: 145 GITVSQEDLDKAWKDAVKNYGGDEKAFVEMIEQVGFTKDTYLENIKSSLAQQKLKDEVAP 204
Query: 428 SVQIVDRKV 436
+ + D ++
Sbjct: 205 AEKPSDEEI 213
>gi|315281501|ref|ZP_07870114.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Listeria marthii
FSL S4-120]
gi|313614849|gb|EFR88380.1| pyruvate:ferredoxin (flavodoxin) oxidoreductase [Listeria marthii
FSL S4-120]
Length = 921
Score = 37.7 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 36/357 (10%), Positives = 102/357 (28%), Gaps = 26/357 (7%)
Query: 46 PGKVPL---SHIKSL----YGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGE 98
G P S ++ YG + ++T+ + + V + L++ A+R ++ + +
Sbjct: 564 KGHGPAWGNSLLEDNAEYGYGMYLANQTMRKALNNKVTQALAEESISEALREALVDWQTQ 623
Query: 99 SDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNV 158
D++ E L+L L ++ + + + Q
Sbjct: 624 MDVSEDTRERAEALQLALLSEMEGNA--------VLESIYNDRELFIKRSQWMLGGDGWA 675
Query: 159 AFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGD 218
+ +DN + + ++ + +A + VG K
Sbjct: 676 YDIGFGGIDHVLASGEDLNIFVMDNEVYSNTGGQSSKATPTAAIAKFASGGKSVGKKDLG 735
Query: 219 QKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCS 278
+ I A K+ L + P P ++ S L
Sbjct: 736 IMAMSYGNIYVAQIAMGANKRQTLKAIEEAEAYPGPSLIIAYTPCINHGISSGMKTMLSE 795
Query: 279 QKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQN 338
+ + + + + N T D + + + + + +
Sbjct: 796 TQKAVECGYWSLYRYNPALEEKGKNPMTMDYKKVDFDQF-----EDFLKRETRYSALYKA 850
Query: 339 VDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHE 395
+ + + + A++R + + + ++ + + ++ + P +
Sbjct: 851 NPEVATKLSEKTRLDAEKRFKRYATMAGLDLEKILK------KKEVTEEAAKAPVDD 901
>gi|304405097|ref|ZP_07386757.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
curdlanolyticus YK9]
gi|304345976|gb|EFM11810.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Paenibacillus
curdlanolyticus YK9]
Length = 365
Score = 37.7 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 43/109 (39%), Gaps = 3/109 (2%)
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED-KV 421
++ +K + V E ++ L + ++K+ + +A+LR + + K+
Sbjct: 112 LMNQELQKQGLVVAEADIDKELDALKKAYGLDDEKLKQTLAQSGMTVADLRPDLEKQAKL 171
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPS 470
+ + D+ + +D + ES ++S + EEA +
Sbjct: 172 RKLLSSKATVTDKDI--QDYYDQNKESFSTPEQVRASHILVKTKEEADA 218
>gi|153811643|ref|ZP_01964311.1| hypothetical protein RUMOBE_02035 [Ruminococcus obeum ATCC 29174]
gi|149832384|gb|EDM87469.1| hypothetical protein RUMOBE_02035 [Ruminococcus obeum ATCC 29174]
Length = 504
Score = 37.7 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 171 DKVTVDYTVSVDNVILEDQS--KKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPE 228
+KV +DY +D V + S K ++GS E L+G GD+ E+ FP+
Sbjct: 422 NKVNIDYVGKIDGVAFDGGSTDGKGTDLVIGSGTYIDNFEEQLIGAHPGDKVEVTVIFPD 481
Query: 229 DHSIKDLAGKKVRLNFSIKEVF 250
D+ DLAGK+ + ++ ++
Sbjct: 482 DYQAADLAGKEAVFDVTVNGIY 503
>gi|327398211|ref|YP_004339080.1| SurA domain-containing protein [Hippea maritima DSM 10411]
gi|327180840|gb|AEA33021.1| SurA domain protein [Hippea maritima DSM 10411]
Length = 287
Score = 37.7 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Query: 361 GIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE----LRAPI 416
++ I V++E+++ + Q E + L ++ L ++ +
Sbjct: 66 DYLIRQYANNMGIIVSDEDVEKYIQQMAEANNLSEDEFLAKLKESNIDLNYYKEGIKLRL 125
Query: 417 FEDK-VIDHILKSVQIVDRKV 436
+ K L S++I D+ +
Sbjct: 126 YRIKFARRVFLSSIKITDKDI 146
>gi|150003942|ref|YP_001298686.1| phosphoglyceromutase [Bacteroides vulgatus ATCC 8482]
gi|254880816|ref|ZP_05253526.1| phosphoglyceromutase [Bacteroides sp. 4_3_47FAA]
gi|166991373|sp|A6L050|GPMI_BACV8 RecName: Full=2,3-bisphosphoglycerate-independent phosphoglycerate
mutase; Short=BPG-independent PGAM;
Short=Phosphoglyceromutase; Short=iPGM
gi|149932366|gb|ABR39064.1| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
[Bacteroides vulgatus ATCC 8482]
gi|254833609|gb|EET13918.1| phosphoglyceromutase [Bacteroides sp. 4_3_47FAA]
Length = 504
Score = 37.7 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 25/266 (9%), Positives = 69/266 (25%), Gaps = 7/266 (2%)
Query: 59 GKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDIT---SGLIEGTVDLKLR 115
GK + ++E E ++ + ++ E D+ + + +L +
Sbjct: 208 GKQATDMV--QAMQESYDEGVTDEFIKPINNSTVDGTIKEGDVVIFFNYRNDRAKELTVV 265
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV 175
L+ +P+ + + LQ D + +N + + ++ +
Sbjct: 266 LTQQDMPEQGMHTIPGLQFYCMTP-YDASFKGVHILFDKENVQNTLGEYLAANGKTQLHI 324
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
T +V + + L LK + E +IK
Sbjct: 325 AETEKYAHVTFFFNGGRETPYDAEERILVPSPKVATYDLKP-EMSAYEVKDKLVEAIKTQ 383
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ +N++ ++ + + AV+ E +
Sbjct: 384 KFDFIVVNYANGDMVGHTGIYDAIEKAVKAIDECVKDTVEAAKANDYEVIIIADHGNADH 443
Query: 296 QILDYISNKYTFDVPESLVENEYNGI 321
+ + + +
Sbjct: 444 ALNEDGTPNTAHSLNPVPFVYVTENK 469
>gi|168007773|ref|XP_001756582.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692178|gb|EDQ78536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1158
Score = 37.7 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 14/218 (6%), Positives = 57/218 (26%), Gaps = 13/218 (5%)
Query: 259 NDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEY 318
++ L ++ + Q+++ + + ++
Sbjct: 528 KEVRKSLFVMEGRVKDLEANEGALHVNMKDKEQELRGLFQRLEKMQSDCAAKDGKIKELQ 587
Query: 319 NGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK----RRVLTGIVLGTIGEKNNIE 374
+ + R + ++ + + + + +K + ++
Sbjct: 588 SSLQDAKRENQQLKAWRVEHEQQREAQAVAMDQLNSKVLELTTANGQLESKKQQMMKQVK 647
Query: 375 VTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDR 434
E + + E+ + + +LR ++K + + + ++
Sbjct: 648 ----EQTQRIQDLSQQASKQEQLVAAKELEAQGLQNQLRGE--QEKTLKLSEE---VEEK 698
Query: 435 KVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEI 472
D+L + E + T E ++
Sbjct: 699 ISQMDELIVYVEQLEQELAALQERVRSTESDEHEQLKL 736
>gi|74004817|ref|XP_545510.2| PREDICTED: similar to spindle pole body component 25 [Canis
familiaris]
Length = 394
Score = 37.7 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Query: 330 SSANQKSQNVDSIDEEDLQYYHMLAKRRVLT-GIVLGTIGEKNNIEVTEEEMQSALYQQL 388
++ + ID+E Q+ +++ G V T + + T ++ A ++L
Sbjct: 158 QQRTRRPRAFGMIDDELAQFDKSISEFWSKFKGTVSDTSSQMVGLRETYKDSIKACAEKL 217
Query: 389 GRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSES 448
E++M++ F +Y N + + + + ++K + + ++ D+K D L N +
Sbjct: 218 SVKLKEEERMVEMFLEYQNQICK-QNNLIQEKKENLLRLVAEVKDKKQELDVLTANIQDL 276
Query: 449 SPEKLLDKSSKVETFQSEEA 468
E K + ++ E
Sbjct: 277 KEEYAKKKETISAANKANEE 296
>gi|331703029|ref|YP_004399716.1| ribose/galactose ABC transporter permease I [Mycoplasma mycoides
subsp. capri LC str. 95010]
gi|328801584|emb|CBW53737.1| Ribose/Galactose ABC transporter, permease component I [Mycoplasma
mycoides subsp. capri LC str. 95010]
Length = 855
Score = 37.7 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 25/235 (10%), Positives = 80/235 (34%), Gaps = 15/235 (6%)
Query: 233 KDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQK 292
+++ K + + + + E ++ ++ + E
Sbjct: 406 QEVNNKYQIYTKQNQITNKTSNPHLFWNGRKNIKIELKNDLKQSFYLVKSKIDEIKKFVD 465
Query: 293 VKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHM 352
+ L+ K + +L+ ++Y L+ + E++ K Q + S + Q
Sbjct: 466 QDKNSLNVNGLKNDLNKQVNLLASKYIQNLRDLDLELADHKYKIQKITSSILNEYQTNIK 525
Query: 353 LAKRRVLTGIVLGTIGEKNNIEVTEEEMQSA--LYQQLGRFPGHEKKMLDHFQKYPNALA 410
AK+ I + +++ I + + S + + L + +
Sbjct: 526 QAKKTHRLKIQQIKVFKESQIGIITYKFDSHNNIIEIKAN-------KLKTIAQLKEQIK 578
Query: 411 ELRAPIFEDKVIDHI------LKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSK 459
+++ + +K I ++ + +I+++ + + + K+L++ +K
Sbjct: 579 NIKSELRLEKQISNLNKSSTQINKAKIIEKIKQLQEQIKVIKKQANAKILEQKNK 633
>gi|327278152|ref|XP_003223826.1| PREDICTED: kinesin-like protein KIF11-like [Anolis carolinensis]
Length = 1053
Score = 37.7 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 17/163 (10%), Positives = 60/163 (36%), Gaps = 3/163 (1%)
Query: 312 SLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKN 371
N + + + + + E + ++ + +
Sbjct: 348 EYAHRAKNIMNKPEVNQKLTKRALIKEYTEEIERLKKDLIAAREKHGVYISLENYDALHG 407
Query: 372 NIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPI-FEDKVIDHILKSVQ 430
+ EE++ + + + K++ + F + + +A + +K ++ K ++
Sbjct: 408 KLTAQEEQIAEYVDKIAA-MEENLKRVTELFTVQKDQMERCQADLQVREKELEDTQKHLE 466
Query: 431 IVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
+ ++ ++ ++ E++ EKL ++K+ + EE ++S
Sbjct: 467 VTKVRLFEEEYVASNLETTEEKLHGTATKLLSTV-EETTKDVS 508
>gi|209878426|ref|XP_002140654.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209556260|gb|EEA06305.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 623
Score = 37.7 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 30/265 (11%), Positives = 81/265 (30%), Gaps = 18/265 (6%)
Query: 195 QFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLP 254
S + + L+G KT + + K+ K+ + ++ S L
Sbjct: 174 HLNDISNAILQWLIDYLIGNKTNTTRLKSETISRVDTSKESWLKEAAKIVTNQDNISLLQ 233
Query: 255 VVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLV 314
V + V + ++ + + + IL +
Sbjct: 234 NDVIDTEKVNQVIKDNISLSESFESPHWRDQTLFSNFRELQMILQSMLESIIITSRPE-- 291
Query: 315 ENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIE 374
+ + + ++S + ++ + Q ++ L
Sbjct: 292 DKSSSRRNELFLRKISHMITELEDYIYNQFDSRQREIEELEQFKKENNKLKKNLRS---- 347
Query: 375 VTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILK-SVQIVD 433
+Q +Q +++L +K + +L++ +DK+I +L+ ++I
Sbjct: 348 -----LQGEFEEQSK----DSQEVLQLQEKAQLTIEQLQSQ--KDKLIADLLEFHMKIKK 396
Query: 434 RKVTFDQLFDNSSESSPEKLLDKSS 458
++ +D+L +E + K
Sbjct: 397 KEADYDELLSKYNELIAKHEALKEE 421
>gi|15829250|ref|NP_326610.1| cell division protein FTSH [Mycoplasma pulmonis UAB CTIP]
gi|38372250|sp|Q98PE4|FTSH_MYCPU RecName: Full=ATP-dependent zinc metalloprotease FtsH
gi|14090194|emb|CAC13952.1| CELL DIVISION PROTEIN FTSH [Mycoplasma pulmonis]
Length = 725
Score = 37.3 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 41/111 (36%), Gaps = 19/111 (17%)
Query: 379 EMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVI-----DHILKSVQI-- 431
E+ + + + E+ + ++ L ++ + E++ I ++I K++++
Sbjct: 602 EIDLEIRKIISA---SEEIAIKAIEQNLELLELIKDSLLENETIVAEEIEYIEKNMKLPP 658
Query: 432 ---------VDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEIS 473
+KV + L + +ES + + E + ++
Sbjct: 659 NNEKIKPDGESKKVNIEDLINQVNESQEKDKQKNAQIKEDLSKMDKKDNLT 709
>gi|254570621|ref|XP_002492420.1| Nucleolar protein [Pichia pastoris GS115]
gi|238032218|emb|CAY70207.1| Nucleolar protein [Pichia pastoris GS115]
gi|328353565|emb|CCA39963.1| Nucleolar protein 4 [Pichia pastoris CBS 7435]
Length = 653
Score = 37.3 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 2/83 (2%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 395 EKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQI----VDRKVTF-DQLFDNSSESS 449
+++ + + + +++ +++ Q+ ++ + F + ++
Sbjct: 555 PEEIFEGLNEDEKKSINMEGFSKRRLIVEFAIENAQVVRRRKEKAINFRKESLKRKADEM 614
Query: 450 PEKLLDKSSKVETFQSEEAPSEI 472
+ + ++ + + ++ ++
Sbjct: 615 KKTEDELKAEAKKAEEDKKAEDV 637
>gi|319639828|ref|ZP_07994557.1| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
[Bacteroides sp. 3_1_40A]
gi|317388492|gb|EFV69342.1| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
[Bacteroides sp. 3_1_40A]
Length = 504
Score = 37.3 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 25/266 (9%), Positives = 69/266 (25%), Gaps = 7/266 (2%)
Query: 59 GKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDIT---SGLIEGTVDLKLR 115
GK + ++E E ++ + ++ E D+ + + +L +
Sbjct: 208 GKQATDMV--QAMQESYDEGVTDEFIKPINNSTVDGTIKEGDVVIFFNYRNDRAKELTVV 265
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV 175
L+ +P+ + + LQ D + +N + + ++ +
Sbjct: 266 LTQQDMPEQGMHTIPGLQFYCMTP-YDASFKGVHILFDKENVQNTLGEYLAANGKTQLHI 324
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
T +V + + L LK + E +IK
Sbjct: 325 AETEKYAHVTFFFNGGRETPYDAEERILVPSPKVATYDLKP-EMSAYEVKDKLVEAIKTQ 383
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ +N++ ++ + + AV+ E +
Sbjct: 384 KFDFIVVNYANGDMVGHTGIYDAIEKAVKAIDECVKDTVEAAKANDYEIIIIADHGNADH 443
Query: 296 QILDYISNKYTFDVPESLVENEYNGI 321
+ + + +
Sbjct: 444 ALNEDGTPNTAHSLNPVPFVYVTENK 469
>gi|167764145|ref|ZP_02436272.1| hypothetical protein BACSTE_02528 [Bacteroides stercoris ATCC
43183]
gi|167698261|gb|EDS14840.1| hypothetical protein BACSTE_02528 [Bacteroides stercoris ATCC
43183]
Length = 556
Score = 37.3 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 22/246 (8%), Positives = 66/246 (26%), Gaps = 5/246 (2%)
Query: 69 EIIKEIVPEILSKRDERAAMRPSITINEGESDIT---SGLIEGTVDLKLRLSYDILPQIE 125
+ ++E E ++ + + + E D+ + + +L + L+ +P+
Sbjct: 267 QAMQESYDEGVTDEFIKPIVNANFDGTIKEGDVVIFFNYRNDRAKELTIVLTQQDMPEQG 326
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ + LQ D + +N + + ++ + T +V
Sbjct: 327 MHTIPGLQYYCMTP-YDASFKGVHILFDKENVQNTLGEYLAANGKTQLHIAETEKYAHVT 385
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ + L LK + E +I + +N++
Sbjct: 386 FFFNGGRETPYDAEERILVPSPKVATYDLKP-EMSAYEVKDKLVEAINTKKFDFIVVNYA 444
Query: 246 IKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
++ + + AV+ E + + + +
Sbjct: 445 NGDMVGHTGIYEAIEKAVKAIDECVKDTVEAAKANDYEVIIIADHGNADHALNEDGTPNT 504
Query: 306 TFDVPE 311
+
Sbjct: 505 AHSLNP 510
>gi|238923918|ref|YP_002937434.1| trigger factor [Eubacterium rectale ATCC 33656]
gi|238875593|gb|ACR75300.1| trigger factor [Eubacterium rectale ATCC 33656]
Length = 185
Score = 37.3 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 161 EVKETESEIGDKVTVDYTVSVDNVILEDQS--KKNVQFIVGSADLFSETTEILVGLKTGD 218
+T +E GDKV +DYT +D E S + ++GS + +VG K G+
Sbjct: 92 TETDTVAENGDKVNIDYTGYMDGEKFEGGSTDGQGTDLVLGSGSYIDGFEDGVVGHKVGE 151
Query: 219 QKEIERFFPEDHS-IKDLAGKKVRLNFSIKEVF 250
++ FP+D+ +LAGK V ++ V+
Sbjct: 152 TFDLNLKFPDDYKANTELAGKDVTFEVTLNGVY 184
>gi|118367603|ref|XP_001017014.1| hypothetical protein TTHERM_00860470 [Tetrahymena thermophila]
gi|89298781|gb|EAR96769.1| hypothetical protein TTHERM_00860470 [Tetrahymena thermophila
SB210]
Length = 788
Score = 37.3 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 33/311 (10%), Positives = 104/311 (33%), Gaps = 21/311 (6%)
Query: 152 EIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEIL 211
+ ++ + +++ ++ E + N ++ + T+ +
Sbjct: 392 FMLFLKNQYQDTYLQIMKENQLQNTEKQKGEDKYAEKNEQINTYYLQQQKQTQTLGTQAM 451
Query: 212 VGLKTGDQKEIERFFPEDHSIKDLA--GKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFES 269
G D++ + + K + + ++ V ++ + G E+
Sbjct: 452 DGKGEEDEEAKRLDNNKPARKITVPAFSSKQKQSLDLEAVSPFNSNKIDKNNEQPEGLEA 511
Query: 270 ESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEM 329
+A S KI+ Q K + + + + V++ Q+ + E+
Sbjct: 512 IAAQLNELSNKIQHDCSNNENQNDKNNFSNVLCKQNSQISKFYQVQDSVIQECQQGQGEL 571
Query: 330 SSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLG 389
++ +N + ++ +++++ V+ QS L +Q+
Sbjct: 572 LNSQFTEENYQFSP--------------YKSSLLQSQFKKQSSL-VSPSNYQSKLQEQIK 616
Query: 390 RFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS 449
+ +++ ++ + ++ DK++D I K +K +L +S
Sbjct: 617 KSVSVNTQIVKSIEEKMKNMKNIQNKNLSDKLVDFIFKMRVFKKKK----ELVGGLKQSQ 672
Query: 450 PEKLLDKSSKV 460
+++ + +K
Sbjct: 673 LQQIESQINKE 683
>gi|124804133|ref|XP_001347911.1| dynein heavy chain, putative [Plasmodium falciparum 3D7]
gi|74863291|sp|Q8IID4|DYHC2_PLAF7 RecName: Full=Dynein heavy chain-like protein PF11_0240
gi|23496164|gb|AAN35824.1|AE014839_33 dynein heavy chain, putative [Plasmodium falciparum 3D7]
Length = 5251
Score = 37.3 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 40/430 (9%), Positives = 118/430 (27%), Gaps = 25/430 (5%)
Query: 58 YGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLS 117
+G SI+ E DE I + ++SK + N +I + + L
Sbjct: 3807 FGYSIIVENADEYIDNTLYNVISKNIIK-------RKNNYYININDKELMFHPSFYIILH 3859
Query: 118 YDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDY 177
+ + + + ++ +N K+ + K
Sbjct: 3860 TQLSNPHYQPEIQSACSLINFTVTPDDLEEHLLSITLENEFNHLSKKKKKLSLLKYDYMC 3919
Query: 178 TVSVDNVILEDQSKKNVQFIVGSADLFSETTE--------ILVGLKTGDQKEIERFFPED 229
+S + + I+ L + + +
Sbjct: 3920 QLSFLQSSILQKLTDAKGDILEDVSLIENLEKTKLLSENIAKKTEIVKNTEVHINTIINL 3979
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNN---DLAVRLGFESESAMRGLCSQKIKQHSE 286
+ G + + ++ +S + +++
Sbjct: 3980 YRPLSKRGVMYFFILQKLKNLHSFYFYSLEIFLKIFIKCLNDSSPNRSPSKVNQEQEYYL 4039
Query: 287 FLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEED 346
L + + E + E + + + + + + ++EE
Sbjct: 4040 KSEDNDFNDDYLGSTKEEEKMEDEEKMEEEKVDEEKMEEEKVDEEKMEDEKVEEKMEEEK 4099
Query: 347 LQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYP 406
+ + ++ + EKN + E + + + + EK + +K
Sbjct: 4100 VVEENTEDEKAIEINTEDEKAVEKNTEDEKAVEKNTEDEKAIEKNTEDEKAV----EKNT 4155
Query: 407 NALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESS---PEKLLDKSSKVETF 463
+ ++K I+ + + V++ ++ + ++E E D+ + +
Sbjct: 4156 EDEKAVEKNTEDEKAIEKNTEDEKAVEKNTEDEKAVEQNTEDEKVVEENTEDEKAVEKNT 4215
Query: 464 QSEEAPSEIS 473
+ E+A + +
Sbjct: 4216 EDEKAVEKNT 4225
>gi|73979819|ref|XP_858309.1| PREDICTED: similar to intersectin 2 isoform 3 isoform 6 [Canis
familiaris]
Length = 1658
Score = 37.3 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 57/182 (31%), Gaps = 30/182 (16%)
Query: 319 NGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNI----- 373
+ E+ Q+ Q+ + + +L +R +V I
Sbjct: 527 DKQCDLEIMEIKQLQQELQDYQNKLIYLVPEKQLLNERIKNMQLVNKNEISNLGIGLLHK 586
Query: 374 -EVTEEEMQSALYQQ--------------LGRFPGHEKKMLDHFQKYPNALAELRAPIFE 418
+ +EE+ L +Q + F K++ + + AL +L I
Sbjct: 587 KSLEKEELCQRLKEQLDALEKETASKLSEMDSFNNQLKELRESYNTQQLALEQL-HKIKR 645
Query: 419 DKVIDHILKSVQIVDRKVTFDQLFDNSSESSP---------EKLLDKSSKVETFQSEEAP 469
DK+ + K +++ +K D+ + + E+ + E E+
Sbjct: 646 DKLKEIERKRSELIQKKKLEDEAIRKAKQGKENLWRESLRKEEEEKQKRLQEEKAQEKVQ 705
Query: 470 SE 471
E
Sbjct: 706 EE 707
>gi|254517383|ref|ZP_05129440.1| chaperone SurA [gamma proteobacterium NOR5-3]
gi|219674221|gb|EED30590.1| chaperone SurA [gamma proteobacterium NOR5-3]
Length = 412
Score = 37.3 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 11/116 (9%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Query: 343 DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF 402
+ R++ + +G + + +++ ++ A+ + G+ ++
Sbjct: 48 EAPPEDVLIRETLDRLILENIQIQMGARFGVRISDAQLDQAMARIAGQNGLTPEQFAMLL 107
Query: 403 QKYPNALAELRAPIFEDKVIDHILKSVQIVD-RKVTFDQLFDNSSESSPEKLLDKS 457
++ + E+R I + +I + + + +++ ++ + S +KL+
Sbjct: 108 EQEGRSYGEIRQNIEREMIIQRV-QQGNVNQLIQISEQEIENYLSTEEGQKLVQPE 162
>gi|78485424|ref|YP_391349.1| diguanylate cyclase/phosphodiesterase [Thiomicrospira crunogena
XCL-2]
gi|78363710|gb|ABB41675.1| diguanylate cyclase/phosphodiesterase [Thiomicrospira crunogena
XCL-2]
Length = 767
Score = 37.3 bits (84), Expect = 5.7, Method: Composition-based stats.
Identities = 5/75 (6%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Query: 57 LYGKSILSETIDE-IIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLR 115
+ + + + + +++ ++ + + + +P + + + + + + L
Sbjct: 492 HFSNHLREDALQKVLVEHLLKQAIQDNEISIVYQPQLNVKQEMIGVEALVRWQNDTLGEV 551
Query: 116 LSYDILPQIEISSFD 130
+P E F
Sbjct: 552 PPSTFIPIAEEMGFM 566
>gi|257868305|ref|ZP_05647958.1| peptidase M41 [Enterococcus casseliflavus EC30]
gi|257874422|ref|ZP_05654075.1| peptidase M41 [Enterococcus casseliflavus EC10]
gi|257802419|gb|EEV31291.1| peptidase M41 [Enterococcus casseliflavus EC30]
gi|257808586|gb|EEV37408.1| peptidase M41 [Enterococcus casseliflavus EC10]
Length = 702
Score = 37.3 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 12/100 (12%), Positives = 35/100 (35%), Gaps = 12/100 (12%)
Query: 379 EMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE--LRAPIFEDKVIDHILKSVQI----- 431
E+ + + L +++++ + +AE L + K I + + ++
Sbjct: 577 EIDQEVRKILMDAHQKAREIIEEHRAQHKLIAEKLLEHETLDAKAIKSLFEEGKMPEGTE 636
Query: 432 -----VDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
++ TF++ E EK + + ++
Sbjct: 637 SSEYPSEKAQTFEEAKRALEEKDAEKQAAEKHSEDAPSND 676
>gi|31873716|emb|CAD97828.1| hypothetical protein [Homo sapiens]
Length = 1763
Score = 37.3 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 69/204 (33%), Gaps = 5/204 (2%)
Query: 268 ESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRF 327
+ +A + + + L + + D+ +LV +E + ++++++
Sbjct: 169 KDVTAAQAELEKAFAGTETEKALRLRLESKLSEMKKMHEGDLAMALVLDEKDRLIEELKL 228
Query: 328 EMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQ 387
+ S Q + + ++ + ++ E + E Q
Sbjct: 229 SLKSKEALIQCLKEEKSQMACPDENVSSGELRGLCAAPREEKERETEAAQMEHQKERNSF 288
Query: 388 LGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
RF E+ + + K E + + DK I + +++ ++KV ++L +
Sbjct: 289 QERFQALEEDLRE---KEREIATEKKNSLKRDKAIQGLTMALKSKEKKV--EELNSEIEK 343
Query: 448 SSPEKLLDKSSKVETFQSEEAPSE 471
S + + + E SE
Sbjct: 344 LSAAFAKAREALQKAQTQEFQGSE 367
>gi|291525367|emb|CBK90954.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Eubacterium rectale DSM 17629]
gi|291527046|emb|CBK92632.1| FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)
[Eubacterium rectale M104/1]
Length = 185
Score = 37.3 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 161 EVKETESEIGDKVTVDYTVSVDNVILEDQS--KKNVQFIVGSADLFSETTEILVGLKTGD 218
+T +E GDKV +DYT +D E S + ++GS + +VG K G+
Sbjct: 92 TEVDTVAENGDKVNIDYTGYMDGEKFEGGSTDGQGTDLVLGSGSYIDGFEDGVVGHKVGE 151
Query: 219 QKEIERFFPEDHS-IKDLAGKKVRLNFSIKEVF 250
++ FP+D+ +LAGK V ++ V+
Sbjct: 152 TFDLNLKFPDDYKANTELAGKDVTFEVTLNGVY 184
>gi|325568178|ref|ZP_08144619.1| cell division protein FtsH [Enterococcus casseliflavus ATCC 12755]
gi|325158379|gb|EGC70530.1| cell division protein FtsH [Enterococcus casseliflavus ATCC 12755]
Length = 702
Score = 37.3 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 12/100 (12%)
Query: 379 EMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE--LRAPIFEDKVIDHILKSVQI----- 431
E+ + + L ++++ + +AE L + K I + + ++
Sbjct: 577 EIDQEVRKILMDAHQKAHEIIEEHRAQHKLIAEKLLEHETLDAKAIKSLFEEGKMPAGTE 636
Query: 432 -----VDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
++ TF++ E EK + + ++
Sbjct: 637 SSEYPSEKAQTFEEAKRALEEKDAEKQAAEKHSEDASSND 676
>gi|148827028|ref|YP_001291781.1| methionyl-tRNA synthetase [Haemophilus influenzae PittGG]
gi|187647724|sp|A5UF42|SYM_HAEIG RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|148718270|gb|ABQ99397.1| methionyl-tRNA synthetase [Haemophilus influenzae PittGG]
Length = 682
Score = 37.3 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 29/402 (7%), Positives = 104/402 (25%), Gaps = 53/402 (13%)
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
K + +E +++ + + P + + + + + + + +
Sbjct: 104 KQLTAEIYNKLKANGF---IKSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCE 160
Query: 120 IL-----------PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE 168
+ P+ +S + + D + + E ++ + +
Sbjct: 161 VCASTYSPMDLINPRSAVSGTTPIVKESEHFFFDLPAFEGMLKEWTRSGSLQSEIANKMQ 220
Query: 169 IGDK-----VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIE 223
+ + + K + + + + + L + G
Sbjct: 221 EWFESGLQQWDISRDAPYFGFEIPGAKDKFFYVWLDAPIGYMASFKNLCNRE-GIDFNEF 279
Query: 224 RFFPEDHSIKDLAGKKVR-LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIK 282
D + GK + + G+ + + S+
Sbjct: 280 WAEGSDAELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTF 339
Query: 283 QHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI 342
+ + + Y + K + + ++ + +Q+V ++ + + ++
Sbjct: 340 IQASTYLNHIDPECLRYYYAAKLNDRIED--LDFNLDDFVQRVNTDIVNKLVNLASRNA- 396
Query: 343 DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF 402
G + K ++ +E + + Q + + +
Sbjct: 397 ------------------GFIAKRFESKLADKLEDESLFAEFTAQAEQ--------IAAY 430
Query: 403 QKYPNALAELRAPI-FEDKVIDHILKSV--QIVDRKVTFDQL 441
+ +R + DK +I + I + +L
Sbjct: 431 YESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAEL 472
>gi|260943710|ref|XP_002616153.1| hypothetical protein CLUG_03394 [Clavispora lusitaniae ATCC 42720]
gi|238849802|gb|EEQ39266.1| hypothetical protein CLUG_03394 [Clavispora lusitaniae ATCC 42720]
Length = 636
Score = 37.3 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 76/250 (30%), Gaps = 11/250 (4%)
Query: 230 HSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLV 289
S K ++++ S+ E + ES + L S K E
Sbjct: 76 MSRAHSYSKYLQVSKSLSEKCKVNSAGFEAPFDDKPDSESFEKLEELTSLHKKLSREVAE 135
Query: 290 RQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQY 349
+ + +E ++ + + + QK Q + + +
Sbjct: 136 ANRTLETLKKESKELERTHKRLRRQTSEKETQIRLLAAQFEAKEQKVQENVAHEAQMTDL 195
Query: 350 YHMLAKRRVLTGIVLGTIGEKNNI----EVTEEEMQSALYQQLGRFPGHEKKMLDHFQKY 405
+ ++L + I E + E A+ + + EK++ + +
Sbjct: 196 RLREHENKLLNDYNEAKFKLETEIAENTEYNDPETTKAIEELEAQKSQLEKELEEAISRK 255
Query: 406 PNA----LAELRAPI---FEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSS 458
A +A + A + + K I+ S Q +++ +QL + S + +
Sbjct: 256 EEAINSEMASMEAEVGETLKQKTIEVDKASAQFQEKQSALEQLLNQCDALSKDVQQKQDE 315
Query: 459 KVETFQSEEA 468
K E E
Sbjct: 316 KTELENQVEE 325
>gi|224827238|ref|ZP_03700332.1| SurA domain protein [Lutiella nitroferrum 2002]
gi|224600527|gb|EEG06716.1| SurA domain protein [Lutiella nitroferrum 2002]
Length = 428
Score = 37.3 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 50/139 (35%), Gaps = 20/139 (14%)
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
+++T V N + V+++E+Q L + + + M K
Sbjct: 70 RQVLEQMITEEVQVQYATSNGVRVSDDELQQTLERLASQNKLTLEAMKAQLAKEGVTFDN 129
Query: 412 LRAPIFEDKVIDHILK-----SVQIVDRKVTFDQLFDNSSESS-------------PEKL 453
R I ++ + + V + D +V +Q+ + ++ PE+
Sbjct: 130 FREQIRRQILLSRLKEREVESRVNVSDTEV--EQVLKSEQTANRSEYRLANILVSVPERA 187
Query: 454 LDKSSKVETFQSEEAPSEI 472
K ++ ++ +A +E+
Sbjct: 188 DAKQIDAQSQKAHKALAEL 206
>gi|290983431|ref|XP_002674432.1| predicted protein [Naegleria gruberi]
gi|284088022|gb|EFC41688.1| predicted protein [Naegleria gruberi]
Length = 766
Score = 36.9 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 22/201 (10%), Positives = 64/201 (31%)
Query: 271 SAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMS 330
+R S + + E + Q R + + + N +K+ ++
Sbjct: 138 KKLRESSSSSPQNNEELIKLQDKIRSLDQQLELSNRERIELQKKIIHLNNENEKLENDLR 197
Query: 331 SANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGR 390
K + LQ + +++ + I + I + +E +
Sbjct: 198 ENKNKMEVEYRNKITQLQTEKDIMEKKHKQTLQDTFIENRKQIALARQEADEMFEENARL 257
Query: 391 FPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSP 450
+ F+ ++ + +K+++ I++ + +++ + E
Sbjct: 258 KKNQAQTEAKTFKAIECQTDKIDTKVLVEKIVEKIVEKPVEKIVEKIVEKVVEKPVEKII 317
Query: 451 EKLLDKSSKVETFQSEEAPSE 471
EK+++K + + E E
Sbjct: 318 EKIVEKPVEKIVEKVVEKIVE 338
>gi|322387720|ref|ZP_08061329.1| peptidyl-prolyl cis-trans isomerase [Streptococcus infantis ATCC
700779]
gi|321141587|gb|EFX37083.1| peptidyl-prolyl cis-trans isomerase [Streptococcus infantis ATCC
700779]
Length = 329
Score = 36.9 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 18/143 (12%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Query: 334 QKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPG 393
K + + + A++ +L + ++ EV+++E++ A+ ++ R+
Sbjct: 33 MKGDVITEHQFYEEVKNNPTAQQILLNMTIQKVFEKQYGSEVSDKEVEDAVAEEQKRYGD 92
Query: 394 HEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKS---VQIVDR--KVTFDQLFDNSSES 448
+ +L + +A I K++++ +K ++ D K +D+ +
Sbjct: 93 SYQIVLSRAGMTAESR---KAQIRTSKLVEYAVKKAAEAELTDENYKKAYDEYTPEVTAQ 149
Query: 449 SPEKLLDKSSKVETFQSEEAPSE 471
+ + +K +++E+ ++
Sbjct: 150 VIKLDSEDKAKEVLAKAQESGAD 172
>gi|72080974|ref|YP_288032.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
gi|71914098|gb|AAZ54009.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
Length = 790
Score = 36.9 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 20/200 (10%), Positives = 57/200 (28%), Gaps = 8/200 (4%)
Query: 229 DHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFL 288
D + D G N+ + + L + + + + +
Sbjct: 598 DLRLWDENGVVSIFNWIQRVQRTILADYEIDPELEKDYEFTYFFNNFVFEITNLIETFKF 657
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
K + NK ++ + + +K + + Q
Sbjct: 658 NVAISKLMVYINFLNKKQKIPSKNYLTDFLIIFSVFAPHTAEELLEKLEQKPLNFQIWPQ 717
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ + V + +E+T+E+ Q + + + + ++ +
Sbjct: 718 FDRSKIFKNTFHLPVSINGKNRGILELTDEKSQEEIIEIAKKDYK-----IRNYLQNKQI 772
Query: 409 LAELRAPIFEDKVIDHILKS 428
+ + P K+++ ILK+
Sbjct: 773 IKVIYIP---RKILNFILKN 789
>gi|322391823|ref|ZP_08065288.1| peptidyl-prolyl cis-trans isomerase [Streptococcus peroris ATCC
700780]
gi|321145303|gb|EFX40699.1| peptidyl-prolyl cis-trans isomerase [Streptococcus peroris ATCC
700780]
Length = 313
Score = 36.9 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 17/143 (11%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Query: 334 QKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPG 393
K + + + A++ +L + ++ EV+++E++ A+ ++ ++
Sbjct: 33 MKGDVITEHQFFEEVKNNATAQQVLLNMTIQKVFEKQYGSEVSDKEVEDAVAEEQKKYGD 92
Query: 394 HEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSV---QIVDR--KVTFDQLFDNSSES 448
+ +L + +A I K++++ +K ++ D K +D+ +
Sbjct: 93 SYQIVLSRAGMTAESR---KAQIRTSKLVEYAVKKAAESELTDENYKKAYDEYTPEVTAQ 149
Query: 449 SPEKLLDKSSKVETFQSEEAPSE 471
+ + +K +++E+ ++
Sbjct: 150 IIKLDSEDKAKEVLAKAKESGAD 172
>gi|319937093|ref|ZP_08011501.1| hypothetical protein HMPREF9488_02335 [Coprobacillus sp. 29_1]
gi|319807803|gb|EFW04392.1| hypothetical protein HMPREF9488_02335 [Coprobacillus sp. 29_1]
Length = 659
Score = 36.9 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 21/237 (8%), Positives = 71/237 (29%), Gaps = 16/237 (6%)
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
G + + + L + N F ++ R + + F +
Sbjct: 339 WGYGMTVFVGSSFITKGLGIEDNFGKVAGAMFATQKMGRSMNRHAKQLGHAFSNAGESAG 398
Query: 296 QILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAK 355
+ D I K + + + + + + ++ E+ + + +
Sbjct: 399 KAFDKIGEKSYDKISQDYQDKMDKAMQGDEFKDAMHEGKTEDDIQQAREKMQEQDY---Q 455
Query: 356 RRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAP 415
+ + G+ ++ ++++ QQ ++ L E +
Sbjct: 456 KDINEQAKKELYGDDYKLQEQKDKL-----QQAKENEQLTEQAKKELYGDDYKLQEQKDK 510
Query: 416 IFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEEAPSEI 472
+ + + ++ D+ +L+ + + EK + +++A +E+
Sbjct: 511 LVQG------EEKAKLTDQA--KKELYGDDYKLQEEKQKLVQADEHAQVTDQAKTEL 559
>gi|307822007|ref|ZP_07652239.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Methylobacter tundripaludum SV96]
gi|307736573|gb|EFO07418.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Methylobacter tundripaludum SV96]
Length = 845
Score = 36.9 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 28/279 (10%), Positives = 71/279 (25%), Gaps = 6/279 (2%)
Query: 51 LSHIKSLYGKSILSETIDE-IIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGT 109
+ + + S+ ++ +I++ + + L + +P + + + +
Sbjct: 570 RNML-QFFQDSMQEAAMERMLIEKELRQALDENQLSLYYQPQVDYHGTLMGAEALIRWNH 628
Query: 110 VDLKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEI 169
+P E +Q RQ + + + + +
Sbjct: 629 PKKGFIPPDKFIPIAEECGL--IQAVGAWVLEQSFIHLRQWDRLQVHLPHLAINISPRQF 686
Query: 170 GDKVTVDYTVSVDNVILEDQSKKNVQFIVG--SADLFSETTEILVGLKTGDQKEIERFFP 227
+ + S+ ++F G D+ +I K G I+ F
Sbjct: 687 YHDDFMGILGRLVKQYQISPSRIMLEFTEGLLMNDVDVAIDKIKQLKKLGYTFSIDDFGT 746
Query: 228 EDHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEF 287
S+ L V K + ++ + V M + +
Sbjct: 747 GYSSLSYLKHLPVDQLKIDKSFVEDITKNEDDAVFVGTIIAIARHMNLGVVAEGVESKME 806
Query: 288 LVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVR 326
L K + + E+ Q+
Sbjct: 807 LEFLKQNGCLCYQGYYFSKPLPEDQFFEHWLRKAKQQFN 845
>gi|308498978|ref|XP_003111675.1| CRE-SSL-1 protein [Caenorhabditis remanei]
gi|308239584|gb|EFO83536.1| CRE-SSL-1 protein [Caenorhabditis remanei]
Length = 1986
Score = 36.9 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 28/412 (6%), Positives = 98/412 (23%), Gaps = 32/412 (7%)
Query: 76 PEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEISSFDDLQVT 135
+ +S+ + + I + + + + P+ +
Sbjct: 147 DKAISQARIKPVVDQIQLIEQFVLKKSLEDVLQDPKYAVLADLSKPPEAPRQPEKPVVPA 206
Query: 136 QDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQ 195
+ I+ ++ E + N + + + + + +
Sbjct: 207 K-----TMHPIEVKIDESDEANAPSTSVMPSAAGAPGENNVERAAKREAHVLARIAELRK 261
Query: 196 FIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEV-FSPLP 254
+ S + E D E + + K+ +
Sbjct: 262 NGLWSNSRLPKCVEPERNKTHWDYLLEEVKWMATDFRAETNHKRRVAKAVAHAIAKRHRD 321
Query: 255 VVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLV 314
A + + M ++ +K+ + + + R + +
Sbjct: 322 KQAEAARAAEREIKEKKRMCAGVAKMVKEFWQGVDKLVDFRANEIRTARLRKAKNKHLMF 381
Query: 315 ENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIE 374
+ + + A++ ++E+ + K
Sbjct: 382 VLGQVDGISSIVQDGLVASKSPSIASHDNDEEFDVGSGSEED-------DEKTIAKAEKS 434
Query: 375 VTEEEMQSALYQQLGRFPGHEKKML---------DHFQKYPNALAELRAPIFE----DKV 421
+ +++++ + G L + P L ++ E K
Sbjct: 435 LKKDDIKKEVDALQDEAGGDMDDFLTTLPPEYLEKVYGISPEHLEAMKQAKRETEERRKA 494
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSE-SSPEKLLDKSSKVETFQSEEAPSEI 472
++ +++ + E S + +E++P ++
Sbjct: 495 EKEAAENA-----PPKVEEVVGEDEKMEVDEAAPTTSEDRPSTSAEKSPEDV 541
>gi|195450769|ref|XP_002072625.1| GK13703 [Drosophila willistoni]
gi|194168710|gb|EDW83611.1| GK13703 [Drosophila willistoni]
Length = 9207
Score = 36.9 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 84/260 (32%), Gaps = 10/260 (3%)
Query: 218 DQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVV----VNNDLAVRLGFESESAM 273
+++E + E K++ +++ + S + + +++
Sbjct: 967 EEEEKQNLLEEQKQKKEVEAANQKISKEDVQQESSEEPQEIVVDQEEEPQQKPDKTKPQQ 1026
Query: 274 RGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSAN 333
+ +K ++ + ++ + + + E + E S
Sbjct: 1027 QKQADEKPQEEATQKQDEEPNKVSKKKALEDESKPKDDKPQEATKKQKEEP---EKVSKK 1083
Query: 334 QKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPG 393
+ ++ ++ Q + + E+ + +E +S +Q
Sbjct: 1084 KSLEDEPKPKDDKPQESTQKQEEEPKKVSKKNAVEEEIKQKDNPQE-ESKNKEQPASTKV 1142
Query: 394 HEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKL 453
+KK +D K + EDK ++ + +K T + + ++SP +
Sbjct: 1143 SKKKAIDDVPKDTPKSSS-TDKQKEDKPVEEAKEKADDTPKKFTQKKPVEEEPKTSPAEK 1201
Query: 454 LDKSSKVETFQSEEAPSEIS 473
VE Q E+A +++S
Sbjct: 1202 QKAEKPVEDKQ-EQASTKVS 1220
>gi|294775098|ref|ZP_06740627.1| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
[Bacteroides vulgatus PC510]
gi|294451142|gb|EFG19613.1| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
[Bacteroides vulgatus PC510]
Length = 519
Score = 36.9 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 25/266 (9%), Positives = 69/266 (25%), Gaps = 7/266 (2%)
Query: 59 GKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDIT---SGLIEGTVDLKLR 115
GK + ++E E ++ + ++ E D+ + + +L +
Sbjct: 223 GKQATDMV--QAMQESYDEGVTDEFIKPINNSTVDGTIKEGDVVIFFNYRNDRAKELTVV 280
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV 175
L+ +P+ + + LQ D + +N + + ++ +
Sbjct: 281 LTQQDMPEQGMHTIPGLQFYCMTP-YDASFKGVHILFDKENVQNTLGEYLAANGKTQLHI 339
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
T +V + + L LK + E +IK
Sbjct: 340 AETEKYAHVTFFFNGGRETPYDAEERILVPSPKVATYDLKP-EMSAYEVKDKLVEAIKTQ 398
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ +N++ ++ + + AV+ E +
Sbjct: 399 KFDFIVVNYANGDMVGHTGIYDAIEKAVKAIDECVKDTVEAAKANDYEVIIIADHGNADH 458
Query: 296 QILDYISNKYTFDVPESLVENEYNGI 321
+ + + +
Sbjct: 459 ALNEDGTPNTAHSLNPVPFVYVTENK 484
>gi|255010100|ref|ZP_05282226.1| phosphoglyceromutase [Bacteroides fragilis 3_1_12]
gi|313147895|ref|ZP_07810088.1| phosphoglyceromutase [Bacteroides fragilis 3_1_12]
gi|313136662|gb|EFR54022.1| phosphoglyceromutase [Bacteroides fragilis 3_1_12]
Length = 504
Score = 36.9 bits (83), Expect = 7.2, Method: Composition-based stats.
Identities = 25/304 (8%), Positives = 79/304 (25%), Gaps = 30/304 (9%)
Query: 21 SNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGKSILSETIDEIIKEIVPEILS 80
R+ ++++ + I KA + + ++E E ++
Sbjct: 193 WERVKEAYDLLVNGIGKKA-----------ADMV--------------QAMQESYDEGVT 227
Query: 81 KRDERAAMRPSITINEGESDIT---SGLIEGTVDLKLRLSYDILPQIEISSFDDLQVTQD 137
+ + ++ E D+ + + +L + L+ +P+ + + LQ
Sbjct: 228 DEFIKPIVNANVDGTIKEGDVVIFFNYRNDRAKELTVVLTQQDMPEAGMHTIPGLQYYCM 287
Query: 138 ICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVILEDQSKKNVQFI 197
D + +N + ++ ++ + T +V + +
Sbjct: 288 TP-YDASFKGVHILFDKENVANTLGEYLAAKGMKQLHIAETEKYAHVTFFFNGGRETPYD 346
Query: 198 VGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFSIKEVFSPLPVVV 257
L LK + E +I + + +N++ ++ +
Sbjct: 347 NEDRILVPSPKVATYDLKP-EMSAYEVKDKLVAAINENKYDFIVVNYANGDMVGHTGIYE 405
Query: 258 NNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENE 317
+ AV + + + + + +
Sbjct: 406 AIEKAVVAVDACVKDTIEAAKAQGYEAIIIADHGNADHALNEDGTPNTAHSLNPVPCVYV 465
Query: 318 YNGI 321
Sbjct: 466 TENK 469
>gi|321457726|gb|EFX68807.1| hypothetical protein DAPPUDRAFT_259616 [Daphnia pulex]
Length = 1283
Score = 36.9 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 25/223 (11%), Positives = 63/223 (28%), Gaps = 10/223 (4%)
Query: 242 LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYI 301
F+ V + ++ + R L K +
Sbjct: 1026 FTFTFVTVMEHATFDQLDFEYKKIKRKLAVIKRKLAEAYEKSLKVVKTEMIKSIEERKTS 1085
Query: 302 SNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG 361
+ + E + NE + ++++ E++ ++ +
Sbjct: 1086 VSFNNYFNYEDKLRNEVHLAVEELNKEVNDVVYQNGQWQLQFQNMWNRNKNDQDFNWRLK 1145
Query: 362 IVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFED-- 419
+ + N E EE + + Q++ + + +++ + +FE+
Sbjct: 1146 L-KNAYSKLFNFESRVEEYKKKVRQEINNYFKSTNSNVSGWRENE------KNQVFEEMF 1198
Query: 420 -KVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVE 461
K++D K D +V F + + E S E
Sbjct: 1199 QKILDEAKKEFPTTDVQVNFMEKIQDQWEKENSVPAKLESNKE 1241
>gi|297685237|ref|XP_002820202.1| PREDICTED: CDK5 regulatory subunit-associated protein 2-like
isoform 1 [Pongo abelii]
Length = 1893
Score = 36.9 bits (83), Expect = 7.8, Method: Composition-based stats.
Identities = 23/204 (11%), Positives = 68/204 (33%), Gaps = 5/204 (2%)
Query: 268 ESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRF 327
+ +A + + + L + + D+ +LV +E + ++++++
Sbjct: 169 KDVTAAQAELEKAFAGAEMEKALRLRLESRLSEMKKMHEGDLAMALVLDEKDRLIEELKL 228
Query: 328 EMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQ 387
+ S Q + + ++ + ++ E + E +
Sbjct: 229 SLKSKEALIQCLKEEKSQMASPDENVSSGELRGLCAAPREEKERETEAAQMEHEKERNNF 288
Query: 388 LGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
R E+ + + K E + + DK I + +++ ++KV ++L +
Sbjct: 289 EERIQALEEDLRE---KEREIATEKKNSLKRDKAIQGLTMALKSKEKKV--EELNSEIEK 343
Query: 448 SSPEKLLDKSSKVETFQSEEAPSE 471
S + + + E +E
Sbjct: 344 LSAAFAKAREALQKAQTQEFQGTE 367
>gi|260891097|ref|ZP_05902360.1| putative chaperone SurA [Leptotrichia hofstadii F0254]
gi|260859124|gb|EEX73624.1| putative chaperone SurA [Leptotrichia hofstadii F0254]
Length = 608
Score = 36.9 bits (83), Expect = 7.8, Method: Composition-based stats.
Identities = 15/157 (9%), Positives = 55/157 (35%), Gaps = 17/157 (10%)
Query: 322 LQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTI-----GEKNNIEVT 376
L+ E++ + + + E+++ + +++ I+V+
Sbjct: 68 LKAQLSEINQQKIQQLSQVGVSAENIKNIPDNIINEYVLQLMINKEVLLSSAHNLGIKVS 127
Query: 377 EEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSV----QIV 432
E+ + + K+ DH + + + I ++K+I+ + + + ++
Sbjct: 128 GAEINKEFNNYQKQSQMNRKEFADHLRNRGYNITSFKKAIKDEKIIEKMREKIFSNDKVT 187
Query: 433 DRKVTF--------DQLFDNSSESSPEKLLDKSSKVE 461
D ++ + E E++ + ++ +
Sbjct: 188 DEEIKKAYERNKYTQAFLNQDFEDVKEQIRENMTQDK 224
>gi|301170011|emb|CBW29615.1| methionyl-tRNA synthetase [Haemophilus influenzae 10810]
Length = 682
Score = 36.9 bits (83), Expect = 8.0, Method: Composition-based stats.
Identities = 29/402 (7%), Positives = 104/402 (25%), Gaps = 53/402 (13%)
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
K + +E +++ + + P + + + + + + + +
Sbjct: 104 KQLTAEIYNKLKANGF---IKSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCE 160
Query: 120 IL-----------PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE 168
+ P+ +S + + D + + E ++ + +
Sbjct: 161 VCASTYSPMDLINPRSAVSGTTPIVKESEHFFFDLPAFEGMLKEWTRSGSLQSEIANKMQ 220
Query: 169 IGDK-----VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIE 223
+ + + K + + + + + L + G
Sbjct: 221 EWFESGLQQWDISRDAPYFGFEIPGAKDKFFYVWLDAPIGYMASFKNLC-EREGIDFSEF 279
Query: 224 RFFPEDHSIKDLAGKKVR-LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIK 282
D + GK + + G+ + + S+
Sbjct: 280 WAEGSDAELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTF 339
Query: 283 QHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI 342
+ + + Y + K + + ++ + +Q+V ++ + + ++
Sbjct: 340 IQASTYLNHIDPECLRYYYAAKLNDRIED--LDFNLDDFVQRVNTDIVNKLVNLASRNA- 396
Query: 343 DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF 402
G + K ++ +E + + Q + + +
Sbjct: 397 ------------------GFIAKRFEGKLADKLEDEALFAEFTAQAEQ--------IAAY 430
Query: 403 QKYPNALAELRAPI-FEDKVIDHILKSV--QIVDRKVTFDQL 441
+ +R + DK +I + I + +L
Sbjct: 431 YESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAEL 472
>gi|289621258|emb|CBI52041.1| unnamed protein product [Sordaria macrospora]
Length = 3189
Score = 36.9 bits (83), Expect = 8.2, Method: Composition-based stats.
Identities = 41/437 (9%), Positives = 122/437 (27%), Gaps = 36/437 (8%)
Query: 52 SHIKSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVD 111
++ + + + D + + P+ +++ + A P + + ES + D
Sbjct: 2186 EILEQ---EELSQDQYDSLFDPVDPKSVTEEGKVEAGDPELPEVDSESVSEPSFKPTSED 2242
Query: 112 LKLRLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGD 171
+ ++ +D L ++ + + + ++ +
Sbjct: 2243 IPATQEEELY----QDQYDALFEPKEENGLQGTAHEAALKFPEVPKISQVDYRDPTMPQF 2298
Query: 172 KVTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHS 231
+ V + + + + + E + + +
Sbjct: 2299 RANVFLPYRDPTMPQFRPNA---VMTISPISVPARVQEPNEKIDHDYAVKRTMGGLDQLE 2355
Query: 232 IKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQ 291
++ AG + ++ + + A E V
Sbjct: 2356 SEERAGLNDEVVEQATDLSEQVLEQLG---AEAGQTEDLYEQLETEQTTRANELLEHVID 2412
Query: 292 KVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYH 351
+ + + I + + ++ V E Q R + ++ + L+
Sbjct: 2413 EHALEEAETILEQIKAEAEQTEVLLEQTNTEQAERVKELLEEVITEQALEETDNALEKIE 2472
Query: 352 MLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE 411
A++ L T + IE+ + + L +++ + + L +
Sbjct: 2473 AEAEQTEELLKELDTEQTERTIEIAQ---NLEIQHSLEENEKTLEQLENEIESTEELLEK 2529
Query: 412 LRAPIFEDKVIDHILKS------------------VQIVDRKVTFDQLFDNSSESSPEKL 453
+ A E ++ +L+ ++ + ++L E + E L
Sbjct: 2530 VDAEQTER--VEELLEQFETEKEIEQNQASMEDIDAEVKKNEALLEELDIKQDERAEEIL 2587
Query: 454 LDKSSKVETFQSEEAPS 470
+ S+ E Q E P+
Sbjct: 2588 EQQGSQPEGSQQEHIPT 2604
>gi|237709463|ref|ZP_04539944.1| phosphoglyceromutase [Bacteroides sp. 9_1_42FAA]
gi|237724938|ref|ZP_04555419.1| phosphoglyceromutase [Bacteroides sp. D4]
gi|265754664|ref|ZP_06089716.1| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
[Bacteroides sp. 3_1_33FAA]
gi|229436676|gb|EEO46753.1| phosphoglyceromutase [Bacteroides dorei 5_1_36/D4]
gi|229456519|gb|EEO62240.1| phosphoglyceromutase [Bacteroides sp. 9_1_42FAA]
gi|263234778|gb|EEZ20346.1| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
[Bacteroides sp. 3_1_33FAA]
Length = 504
Score = 36.5 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 25/266 (9%), Positives = 69/266 (25%), Gaps = 7/266 (2%)
Query: 59 GKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDIT---SGLIEGTVDLKLR 115
GK + ++E E ++ + ++ E D+ + + +L +
Sbjct: 208 GKQAADMV--QAMQESYDEGVTDEFIKPINNSTVDGTIKEGDVVIFFNYRNDRAKELTVV 265
Query: 116 LSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTV 175
L+ +P+ + + LQ D + +N + + ++ +
Sbjct: 266 LTQQDMPEQGMHTIPGLQFYCMTP-YDASFKGVHILFDKENVQNTLGEYLAANGKTQLHI 324
Query: 176 DYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDL 235
T +V + + L LK + E +IK
Sbjct: 325 AETEKYAHVTFFFNGGRETPYDAEERILVPSPKVATYDLKP-EMSAYEVKDKLVEAIKTQ 383
Query: 236 AGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKR 295
+ +N++ ++ + + AV+ E +
Sbjct: 384 KFDFIVVNYANGDMVGHTGIYEAIEKAVKAIDECVKDTVEAAKANDYEVIIIADHGNADH 443
Query: 296 QILDYISNKYTFDVPESLVENEYNGI 321
+ + + +
Sbjct: 444 ALNEDGTPNTAHSLNPVPFVYVTENK 469
>gi|310825131|ref|YP_003957489.1| foldase protein PrsA [Stigmatella aurantiaca DW4/3-1]
gi|309398203|gb|ADO75662.1| foldase protein PrsA [Stigmatella aurantiaca DW4/3-1]
Length = 330
Score = 36.5 bits (82), Expect = 8.6, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 50/128 (39%), Gaps = 3/128 (2%)
Query: 324 KVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSA 383
+ E+ ++ + EE + L + ++L ++ N+ VT +E+
Sbjct: 47 EFEQELWRELSSAEGPERTPEEVEPFKRALLDTLIKRMLLLQQ-AKQYNLTVTPDEVDRR 105
Query: 384 LYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFD 443
+ + G +P + + + +LAELRA +I+ + + VT ++L
Sbjct: 106 MLRLSGDYPA--ENFSEVLAQGQMSLAELRAREANRLIIEKLFTNHVYARVAVTEEELRA 163
Query: 444 NSSESSPE 451
+ E
Sbjct: 164 AYTAHEAE 171
>gi|313679080|ref|YP_004056819.1| ppic-type peptidyl-prolyl cis-trans isomerase [Oceanithermus
profundus DSM 14977]
gi|313151795|gb|ADR35646.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Oceanithermus
profundus DSM 14977]
Length = 621
Score = 36.5 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 373 IEVTEEEMQSALYQQLGRFPGHEKKMLDHFQK-----YPNALAELRAPIFEDKVIDHILK 427
I V+ E++ + Q R +++ D F + E+R + K ID + K
Sbjct: 96 IRVSSSEVKQQVDQLRERLGVTDREGYDRFLQSIGYTDSQLRDEIRTQLRIQKRIDELRK 155
Query: 428 SVQIVDRKVTF 438
V++ D + F
Sbjct: 156 KVKLTDEEARF 166
>gi|68250200|ref|YP_249312.1| methionyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|81335378|sp|Q4QJZ5|SYM_HAEI8 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|68058399|gb|AAX88652.1| methionyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
Length = 682
Score = 36.5 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 29/402 (7%), Positives = 104/402 (25%), Gaps = 53/402 (13%)
Query: 60 KSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
K + +E +++ + + P + + + + + + + +
Sbjct: 104 KQLTAEIYNKLKANGF---IKSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCE 160
Query: 120 IL-----------PQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESE 168
+ P+ +S + + D + + E ++ + +
Sbjct: 161 VCASTYSPMDLINPRSAVSGTTPIVKESEHFFFDLPAFEGMLKEWTRSGSLQSEIANKMQ 220
Query: 169 IGDK-----VTVDYTVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIE 223
+ + + K + + + + + L + G
Sbjct: 221 EWFESGLQQWDISRDAPYFGFEIPGAKDKFFYVWLDAPIGYMASFKNLC-EREGIDFNEF 279
Query: 224 RFFPEDHSIKDLAGKKVR-LNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIK 282
D + GK + + G+ + + S+
Sbjct: 280 WAEGSDAELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSKSRGTF 339
Query: 283 QHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSI 342
+ + + Y + K + + ++ +Q+V ++ + + ++
Sbjct: 340 IQASTYLNHIDPECLRYYYAAKLNDRIED--LDFNLEDFVQRVNTDIVNKLVNLASRNA- 396
Query: 343 DEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHF 402
G + K + ++ +E + + Q + + +
Sbjct: 397 ------------------GFIAKRFEGKLSDKLEDEALFAEFTAQAEQ--------IAAY 430
Query: 403 QKYPNALAELRAPI-FEDKVIDHILKSV--QIVDRKVTFDQL 441
+ +R + DK +I + I + +L
Sbjct: 431 YESREYNKAIREIMALTDKANKYIDEKAPWVIAKEEGKEAEL 472
>gi|297685239|ref|XP_002820203.1| PREDICTED: CDK5 regulatory subunit-associated protein 2-like
isoform 2 [Pongo abelii]
Length = 1814
Score = 36.5 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 23/204 (11%), Positives = 68/204 (33%), Gaps = 5/204 (2%)
Query: 268 ESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRF 327
+ +A + + + L + + D+ +LV +E + ++++++
Sbjct: 169 KDVTAAQAELEKAFAGAEMEKALRLRLESRLSEMKKMHEGDLAMALVLDEKDRLIEELKL 228
Query: 328 EMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQ 387
+ S Q + + ++ + ++ E + E +
Sbjct: 229 SLKSKEALIQCLKEEKSQMASPDENVSSGELRGLCAAPREEKERETEAAQMEHEKERNNF 288
Query: 388 LGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
R E+ + + K E + + DK I + +++ ++KV ++L +
Sbjct: 289 EERIQALEEDLRE---KEREIATEKKNSLKRDKAIQGLTMALKSKEKKV--EELNSEIEK 343
Query: 448 SSPEKLLDKSSKVETFQSEEAPSE 471
S + + + E +E
Sbjct: 344 LSAAFAKAREALQKAQTQEFQGTE 367
>gi|317130675|ref|YP_004096957.1| LPXTG-motif cell wall anchor domain protein [Bacillus
cellulosilyticus DSM 2522]
gi|315475623|gb|ADU32226.1| LPXTG-motif cell wall anchor domain protein [Bacillus
cellulosilyticus DSM 2522]
Length = 1622
Score = 36.5 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 43/430 (10%), Positives = 136/430 (31%), Gaps = 23/430 (5%)
Query: 60 KSILSETIDEIIKEI--VPEILSKRDE---RAAMRPSITINEGESDITSGLIEGTVDLKL 114
K + + +I E + E + ++ +AA ++ E D D
Sbjct: 766 KDAIEAATEALIDETKKLEEAVEAKELANAKAAGEEALEKTEKAQDRYYNAGGEESDELY 825
Query: 115 RLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVT 174
+ ++ ++ ++ E + ++ ++ + A E+ ++ + +
Sbjct: 826 EA-VEAAKEVLNNALQATPAEKEAIEAATEALNDATKKLEEAAEAKELANAKAAGEEALQ 884
Query: 175 VDYTVSVDNVILEDQ-SKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+ S + + + + ++ + + K + E ++
Sbjct: 885 EATKAKDRYYNAGGEESDELYEVVEAAKEVLNNALQATPVEKDAIEAATEALNDATKKLE 944
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
+ A + + + A +S + +++ L
Sbjct: 945 EAA----EQKELENAKAAGEDALDEAEKAHDRYKKSGGEASDELYEAVEEAKNTLQEALH 1000
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
+ + + T + +++E + + ++++ + Q ++ + D
Sbjct: 1001 QDPLNKETIEEATALLEAAILELNMETTTKDLETDITNVDSIDQLLEVKQKIDSSDISED 1060
Query: 354 AKRRVLTGIVLGTIGEKNNIE-VTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAEL 412
K + T +V + K + V E+++Q + +K + NA+ ++
Sbjct: 1061 RKAHLYTNLVNKWLETKTSFSFVDEDQVQQLVDAVEQSDKEETEKQQAYIALIENAIDDV 1120
Query: 413 -----------RAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVE 461
+ E+KVI+ +++V + K L + + ++ + + E
Sbjct: 1121 AKHDKPVNAETKFQQPENKVIELAIQNVTSDEEKQRLTTLLELTVDARALSMQTAFTFAE 1180
Query: 462 TFQSEEAPSE 471
E S+
Sbjct: 1181 GDTWESITSK 1190
>gi|16271817|ref|NP_438154.1| tail protein [Temperate phage phiNIH1.1]
gi|16156209|gb|AAL15083.1| tail protein [temperate phage PhiNIH1.1]
Length = 1086
Score = 36.5 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 20/205 (9%), Positives = 66/205 (32%), Gaps = 8/205 (3%)
Query: 263 VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGIL 322
ES +R + +++ + L K ++++ + L
Sbjct: 468 QEGLVESNKQLRDSVREGVQERKKGLESVKESTAAHQKLADEIIKLAAKENKTAGEKRNL 527
Query: 323 QKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQS 382
+ E++ + + L + K R+ T + E+ +S
Sbjct: 528 KNKIDELNGSIDGLNLAYDKNSNSLSHNADQIKSRISAMEAESTWQTAQQNLLNIEQKRS 587
Query: 383 ALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLF 442
+ ++L +K N A + + ++K+ + + ++ + + + +
Sbjct: 588 EVSKKLAENAE--------LRKKWNEEANVSDSVRKEKIAELTEEEAKLKNMQTQLQEEY 639
Query: 443 DNSSESSPEKLLDKSSKVETFQSEE 467
+ +S + ++ E+ + +
Sbjct: 640 NKTSATQQAAADAMAAAEESGSARQ 664
>gi|21910753|ref|NP_665021.1| putative minor tail protein - phage associated [Streptococcus
pyogenes MGAS315]
gi|28876331|ref|NP_795590.1| putative minor tail protein [Streptococcus pyogenes phage 315.4]
gi|28895556|ref|NP_801906.1| tail protein [Streptococcus pyogenes SSI-1]
gi|21904957|gb|AAM79824.1| putative minor tail protein - phage-associated [Streptococcus
pyogenes MGAS315]
gi|28810805|dbj|BAC63739.1| putative tail protein [Streptococcus pyogenes SSI-1]
Length = 1086
Score = 36.5 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 20/205 (9%), Positives = 66/205 (32%), Gaps = 8/205 (3%)
Query: 263 VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGIL 322
ES +R + +++ + L K ++++ + L
Sbjct: 468 QEGLVESNKQLRDSVREGVQERKKGLESVKESTAAHQKLADEIIKLAAKENKTAGEKRNL 527
Query: 323 QKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQS 382
+ E++ + + L + K R+ T + E+ +S
Sbjct: 528 KNKIDELNGSIDGLNLAYDKNSNSLSHNADQIKSRISAMEAESTWQTAQQNLLNIEQKRS 587
Query: 383 ALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLF 442
+ ++L +K N A + + ++K+ + + ++ + + + +
Sbjct: 588 EVSKKLAENAE--------LRKKWNEEANVSDSVRKEKIAELTEEEAKLKNMQTQLQEEY 639
Query: 443 DNSSESSPEKLLDKSSKVETFQSEE 467
+ +S + ++ E+ + +
Sbjct: 640 NKTSATQQAAADAMAAAEESGSARQ 664
>gi|167465135|ref|ZP_02330224.1| putative PpiC-type peptidyl-prolyl cis-trans isomerase
[Paenibacillus larvae subsp. larvae BRL-230010]
Length = 246
Score = 36.5 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 33/95 (34%), Gaps = 4/95 (4%)
Query: 363 VLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVI 422
+ + +++++ ++ L + + E +Q L R + +D
Sbjct: 74 AIKMEAQSAGLQISDADIDKELKVMMQAYESEEV----FYQSMKEQLGMSRQEVKDDVYY 129
Query: 423 DHILKSVQIVDRKVTFDQLFDNSSESSPEKLLDKS 457
+L+ V D +V+ ++ D E +
Sbjct: 130 KLLLEKVATKDIQVSDSEIQDYIQAHPEEYAKKRE 164
>gi|118088943|ref|XP_419901.2| PREDICTED: similar to bullous pemphigoid antigen 1, 230/240kDa
[Gallus gallus]
Length = 7774
Score = 36.5 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 25/219 (11%), Positives = 65/219 (29%), Gaps = 12/219 (5%)
Query: 260 DLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYN 319
++A +A + K ++L+ I + + E
Sbjct: 3785 EVARTKMQLESTAFDVQFFISEHAQDLSPNQSKQLLRLLNTIQKSFQEVQETVTSQVESL 3844
Query: 320 GILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTG------IVLGTIGEKNNI 373
+ E+ ++ E+ + ML + ++ + E
Sbjct: 3845 ETQLQAAQELGDQKDVAERQQECKEKLQEICDMLTQTENRLIGQQESLLIGDSKAELEQY 3904
Query: 374 EVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVID-----HILKS 428
+ +EE+Q + K + ++ L++ + E K+ + +L
Sbjct: 3905 QTKQEEIQKDMRASAQTLAEIVKNTENFLKENGGKLSQEDKAVLEQKLNEAKTKCLLLSQ 3964
Query: 429 VQIVDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSEE 467
+ + K D+ + + EK+ E+ + E
Sbjct: 3965 -KAEESKKELDKAMTTAIKQETEKVAAIEQLEESKNTIE 4002
>gi|269792688|ref|YP_003317592.1| hypothetical protein Taci_1078 [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100323|gb|ACZ19310.1| hypothetical protein Taci_1078 [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 340
Score = 36.5 bits (82), Expect = 9.2, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 3/122 (2%)
Query: 310 PESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGE 369
+ V + + + EM Q D + D+ + ++ G+ L +
Sbjct: 41 GDYPVAKLDGKKIMRSQVEMRLREVAEQFGDRVTSGDVPMIRRMILDDIVVGMELTKAAK 100
Query: 370 KNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNALA-ELRAPIFEDKVIDHILKS 428
I+V +EE+ L +FP K+ D + K ELR + E+ + +++
Sbjct: 101 AEGIKVAKEEVDQYLASMQAQFPT--KEAYDEYLKRSGMTERELRRKVEENIAVGKLMEK 158
Query: 429 VQ 430
V
Sbjct: 159 VT 160
>gi|145555|gb|AAA23587.1| ORF [Escherichia coli]
Length = 43
Score = 36.5 bits (82), Expect = 9.3, Method: Composition-based stats.
Identities = 7/43 (16%), Positives = 23/43 (53%)
Query: 404 KYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSS 446
K + +R E++ ++ +L ++ +++ TF++L + +
Sbjct: 1 KNKELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA 43
>gi|189464550|ref|ZP_03013335.1| hypothetical protein BACINT_00893 [Bacteroides intestinalis DSM
17393]
gi|189438340|gb|EDV07325.1| hypothetical protein BACINT_00893 [Bacteroides intestinalis DSM
17393]
Length = 504
Score = 36.5 bits (82), Expect = 9.4, Method: Composition-based stats.
Identities = 22/256 (8%), Positives = 67/256 (26%), Gaps = 5/256 (1%)
Query: 69 EIIKEIVPEILSKRDERAAMRPSITINEGESDIT---SGLIEGTVDLKLRLSYDILPQIE 125
+ ++E E ++ + + + E D+ + + +L + L+ +P+
Sbjct: 216 QAMQESYDEGVTDEFIKPIVNGNFDGTIKEGDVVIFFNYRNDRAKELTVVLTQQDMPEQG 275
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ + LQ D + +N + ++ ++ + T +V
Sbjct: 276 MHAIPGLQYYCMTP-YDASFKGVHILFDKENVQNTLGEYLAAQGKTQLHIAETEKYAHVT 334
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ + L LK + E +I + +N++
Sbjct: 335 FFFNGGRETPYDAEERILVPSPKVATYDLKP-EMSAYEVKDKLVEAINTQKFDFIVVNYA 393
Query: 246 IKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
++ + + AV+ E + + + +
Sbjct: 394 NGDMVGHTGIYDAIEKAVKAIDECVKDTVEAAKANDYEVIIIADHGNADHALNEDGTPNT 453
Query: 306 TFDVPESLVENEYNGI 321
+
Sbjct: 454 AHSLNPVPFVYVTENK 469
>gi|255692965|ref|ZP_05416640.1| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
[Bacteroides finegoldii DSM 17565]
gi|260621276|gb|EEX44147.1| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
[Bacteroides finegoldii DSM 17565]
Length = 504
Score = 36.5 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 23/256 (8%), Positives = 69/256 (26%), Gaps = 5/256 (1%)
Query: 69 EIIKEIVPEILSKRDERAAMRPSITINEGESDIT---SGLIEGTVDLKLRLSYDILPQIE 125
+ ++E E ++ + + ++ E D+ + + +L + L+ +P+
Sbjct: 216 QAMQESYDEGVTDEFIKPIVNANVDGTIKEGDVVIFFNYRNDRAKELTVVLTQQDMPEAG 275
Query: 126 ISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVDNVI 185
+ + LQ D + +N + ++ ++ + T +V
Sbjct: 276 MHTIPGLQYYCMTP-YDASFKGVHILFDKENVANTLGEYLSAKGMSQLHIAETEKYAHVT 334
Query: 186 LEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRLNFS 245
+ F L LK + E +I + + +NF+
Sbjct: 335 FFFNGGRETPFDKEDRILVPSPKVATYDLKP-EMSAYEVKDKLVAAINENKYDFIVVNFA 393
Query: 246 IKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKY 305
++ + + AV + + + + + +
Sbjct: 394 NGDMVGHTGIYEAIEKAVVAVDACVKDVIEAAKAQDYEAIIIADHGNADHALNEDGTPNT 453
Query: 306 TFDVPESLVENEYNGI 321
+
Sbjct: 454 AHSLNPVPCVYVTENK 469
>gi|94990822|ref|YP_598922.1| phage protein [Streptococcus pyogenes MGAS10270]
gi|94544330|gb|ABF34378.1| phage protein [Streptococcus pyogenes MGAS10270]
Length = 1093
Score = 36.5 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 20/205 (9%), Positives = 66/205 (32%), Gaps = 8/205 (3%)
Query: 263 VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGIL 322
ES +R + +++ + L K ++++ + L
Sbjct: 475 QEGLVESNKQLRDSVREGVQERKKGLESVKESTAAHQKLADEIIKLAAKENKTAGEKRNL 534
Query: 323 QKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQS 382
+ E++ + + L + K R+ T + E+ +S
Sbjct: 535 KNKIDELNGSIDGLNLAYDKNSNSLSHNADQIKSRISAMEAESTWQTAQQNLLNIEQKRS 594
Query: 383 ALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLF 442
+ ++L +K N A + + ++K+ + + ++ + + + +
Sbjct: 595 EVSKKLAENAE--------LRKKWNEEANVSDSVRKEKIAELTEEEAKLKNMQTQLQEEY 646
Query: 443 DNSSESSPEKLLDKSSKVETFQSEE 467
+ +S + ++ E+ + +
Sbjct: 647 NKTSATQQAAADAMAAAEESGSARQ 671
>gi|71903898|ref|YP_280701.1| phage protein [Streptococcus pyogenes MGAS6180]
gi|71802993|gb|AAX72346.1| phage protein [Streptococcus pyogenes MGAS6180]
Length = 1093
Score = 36.5 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 20/205 (9%), Positives = 66/205 (32%), Gaps = 8/205 (3%)
Query: 263 VRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGIL 322
ES +R + +++ + L K ++++ + L
Sbjct: 475 QEGLVESNKQLRDSVREGVQERKKGLESVKESTAAHQKLADEIIKLAAKENKTAGEKRNL 534
Query: 323 QKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQS 382
+ E++ + + L + K R+ T + E+ +S
Sbjct: 535 KNKIDELNGSIDGLNLAYDKNSNSLSHNADQIKSRISAMEAESTWQTAQQNLLNIEQKRS 594
Query: 383 ALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLF 442
+ ++L +K N A + + ++K+ + + ++ + + + +
Sbjct: 595 EVSKKLAENAE--------LRKKWNEEANVSDSVRKEKIAELTEEEAKLKNMQTQLQEEY 646
Query: 443 DNSSESSPEKLLDKSSKVETFQSEE 467
+ +S + ++ E+ + +
Sbjct: 647 NKTSATQQAAADAMAAAEESGSARQ 671
>gi|54020648|ref|YP_116175.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
gi|53987821|gb|AAV28022.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
Length = 755
Score = 36.5 bits (82), Expect = 9.6, Method: Composition-based stats.
Identities = 21/200 (10%), Positives = 56/200 (28%), Gaps = 8/200 (4%)
Query: 229 DHSIKDLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFL 288
D + D G N+ + + L + + + + +
Sbjct: 563 DLRLWDENGVVSIFNWIQRVQRTILANYEIDPELEKDYEFTYFFNNFVFEITNLIETFKF 622
Query: 289 VRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQ 348
K I NK ++ + + +K + Q
Sbjct: 623 NVAISKLMIYINFLNKKQKIPSKNYLTDFLIIFSVFAPHTAEELLEKLGQKPLNFQIWPQ 682
Query: 349 YYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLDHFQKYPNA 408
+ + V + +E+T+E+ Q + + + + ++ +
Sbjct: 683 FDRSKIFKNTFHLPVSINGKNRGILELTDEKSQEEIIEIAKKDYK-----IRNYLQNKQI 737
Query: 409 LAELRAPIFEDKVIDHILKS 428
+ + P K+++ ILK+
Sbjct: 738 IKVIYIP---RKILNFILKN 754
>gi|38233152|ref|NP_938919.1| putative sialidase precursor [Corynebacterium diphtheriae NCTC
13129]
gi|38199411|emb|CAE49054.1| Putative sialidase precursor [Corynebacterium diphtheriae]
Length = 721
Score = 36.5 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 382 SALYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFE-DKVIDHILKSVQIVDRKVTFDQ 440
L ++L ++ ++ A+ +L +F+ + + K + ++ V+ D
Sbjct: 539 EKLTEELAAARKENDELKTQVKESEEAVGDLADKVFKLENAVTEAKKKATVAEKAVS-DA 597
Query: 441 LFD-NSSESSPEK 452
L +ES E+
Sbjct: 598 LAKLQEAESIAEE 610
>gi|107122962|gb|ABF83589.1| CDK5RAP2 [Gorilla gorilla]
Length = 1893
Score = 36.5 bits (82), Expect = 9.8, Method: Composition-based stats.
Identities = 25/204 (12%), Positives = 68/204 (33%), Gaps = 5/204 (2%)
Query: 268 ESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLVENEYNGILQKVRF 327
+ +A + + + L + + D+ +LV +E + ++++++
Sbjct: 169 KDVTAAQAELEKAFAGTETEKALRLRLESKLSEMKKMHEGDLAMALVLDEKDRLIEELKL 228
Query: 328 EMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQ 387
+ S Q + + ++ + ++ E + E Q
Sbjct: 229 SLKSKEALIQCLKEEKSQMASPDENVSSGELRGLCAAPREEKERETEAAQMEHQKERNSF 288
Query: 388 LGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKVIDHILKSVQIVDRKVTFDQLFDNSSE 447
R E+ + + K E + + DK I + +++ ++KV ++L +
Sbjct: 289 EERIQALEEDLRE---KEREIATEKKNSLKRDKAIQGLTMALKSKEKKV--EELNSEIEK 343
Query: 448 SSPEKLLDKSSKVETFQSEEAPSE 471
S + + + E SE
Sbjct: 344 LSAAFAKAREALQKAQTQEFQGSE 367
>gi|291045225|ref|NP_596869.4| titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 36.5 bits (82), Expect = 9.9, Method: Composition-based stats.
Identities = 36/407 (8%), Positives = 106/407 (26%), Gaps = 40/407 (9%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPL----SHI--- 54
+V + +++ +P E + ++ KVP +
Sbjct: 9200 KVQVTKVPEVSKKI---VPQKPSRTPVQEEVIEV------------KVPAVHTKKMVISE 9244
Query: 55 KSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKL 114
+ ++ S E + + E+ EI+++ A+ + ++ V
Sbjct: 9245 EKMFFASHTEEEVSVTVPEVQKEIVTEEKIHVAISKRVEPPPKVPELPEKPAPEEVAPVP 9304
Query: 115 RLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVT 174
P ++ V ++ V + + V E + +
Sbjct: 9305 IPKKVEPPAPKVPEVPKKPVPEEKKPVPVPKKEPAAPPKVPEVPKKPVPEEKIPVPVAKK 9364
Query: 175 VDY-TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+ V V +++ + + + + K ++++ E+
Sbjct: 9365 KEAPPAKVPEVQKGVVTEEKITIVTQREESPPPAVPEIPKKKVPEERKPVPRKEEEVPPP 9424
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
+ ++V P+P + R S+K + V ++
Sbjct: 9425 PKVPALPKKPVPEEKVAVPVP-----------VAKKAPPPRAEVSKKTVVEEKRFVAEEK 9473
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
+ +V + ++ + + E ++
Sbjct: 9474 LSFAVPQRVEVTRHEVSAEEEWSYSEEEEGVSISVYREEEREEEEEAEVTEYEVMEEPEE 9533
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLD 400
I+ +E E+ +++ P K+ +
Sbjct: 9534 YVVEEKLHIISKR------VEAEPAEVTERQEKKIVLKPKIPAKIEE 9574
>gi|225131084|gb|ACN81321.1| titin [Homo sapiens]
Length = 33423
Score = 36.5 bits (82), Expect = 9.9, Method: Composition-based stats.
Identities = 36/407 (8%), Positives = 106/407 (26%), Gaps = 40/407 (9%)
Query: 2 QVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPL----SHI--- 54
+V + +++ +P E + ++ KVP +
Sbjct: 9200 KVQVTKVPEVSKKI---VPQKPSRTPVQEEVIEV------------KVPAVHTKKMVISE 9244
Query: 55 KSLYGKSILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKL 114
+ ++ S E + + E+ EI+++ A+ + ++ V
Sbjct: 9245 EKMFFASHTEEEVSVTVPEVQKEIVTEEKIHVAISKRVEPPPKVPELPEKPAPEEVAPVP 9304
Query: 115 RLSYDILPQIEISSFDDLQVTQDICEVDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVT 174
P ++ V ++ V + + V E + +
Sbjct: 9305 IPKKVEPPAPKVPEVPKKPVPEEKKPVPVPKKEPAAPPKVPEVPKKPVPEEKIPVPVAKK 9364
Query: 175 VDY-TVSVDNVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIK 233
+ V V +++ + + + + K ++++ E+
Sbjct: 9365 KEAPPAKVPEVQKGVVTEEKITIVTQREESPPPAVPEIPKKKVPEERKPVPRKEEEVPPP 9424
Query: 234 DLAGKKVRLNFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKV 293
+ ++V P+P + R S+K + V ++
Sbjct: 9425 PKVPALPKKPVPEEKVAVPVP-----------VAKKAPPPRAEVSKKTVVEEKRFVAEEK 9473
Query: 294 KRQILDYISNKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHML 353
+ +V + ++ + + E ++
Sbjct: 9474 LSFAVPQRVEVTRHEVSAEEEWSYSEEEEGVSISVYREEEREEEEEAEVTEYEVMEEPEE 9533
Query: 354 AKRRVLTGIVLGTIGEKNNIEVTEEEMQSALYQQLGRFPGHEKKMLD 400
I+ +E E+ +++ P K+ +
Sbjct: 9534 YVVEEKLHIISKR------VEAEPAEVTERQEKKIVLKPKIPAKIEE 9574
>gi|195121786|ref|XP_002005400.1| GI20451 [Drosophila mojavensis]
gi|193910468|gb|EDW09335.1| GI20451 [Drosophila mojavensis]
Length = 971
Score = 36.5 bits (82), Expect = 9.9, Method: Composition-based stats.
Identities = 39/387 (10%), Positives = 117/387 (30%), Gaps = 23/387 (5%)
Query: 68 DEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDILPQIEIS 127
DE+ + EIL + I+ + + +T+ L E + Y Q
Sbjct: 601 DELFDKAKGEILDE----VVTLSQISAKKWDDALTTKLWEKLSNYVFENIYLPAAQSGSQ 656
Query: 128 SFDDLQVTQDICE-----VDEKEIDRQMAEIAKNNVAFEVKETESEIGDKVTVDYTVSVD 182
+ + V + + + K ++ + + ++ + ++ D V +V
Sbjct: 657 NSFNTMVDIKLRQWAEQALPAKSVEAGWEALQQEFISLMERAKKAHDHDDVFDQLKAAVV 716
Query: 183 NVILEDQSKKNVQFIVGSADLFSETTEILVGLKTGDQKEIERFFPEDHSIKDLAGKKVRL 242
+ + S ++ + + + V KT + + F E+ LA + L
Sbjct: 717 DEAIRRHSWEDKAIDMLRVIQLNTLEDRFVHDKT--EWDQAVKFLENSVNAKLAQTEETL 774
Query: 243 NFSIKEVFSPLPVVVNNDLAVRLGFESESAMRGLCSQKIKQHSEFLVRQKVKRQILDYIS 302
+ + S + +H L ++ + +
Sbjct: 775 AQMFGPGPWTRFAQWKSLTPDQQKRRSVKGELDKILKNDSKHLPSLSYDEL-TTVRKNLQ 833
Query: 303 NKYTFDVPESLVENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGI 362
+ + + + + + + + + + +
Sbjct: 834 RDNVEVDTDYIRQTWFPVYRKHFLQQALQRAKDCRKAYYLYTQQGSECEVSCSD------ 887
Query: 363 VLGTIGEKNNIEVTEEEMQSA-LYQQLGRFPGHEKKMLDHFQKYPNALAELRAPIFEDKV 421
V+ + I+VT ++ + ++ R K +LD F + +A + K
Sbjct: 888 VVLFWRIQQVIKVTGNALRQQVINREARRLDKEIKAVLDEFSEDEER----KAQLLTGKR 943
Query: 422 IDHILKSVQIVDRKVTFDQLFDNSSES 448
+ + +++ + ++ ++ ++
Sbjct: 944 VQLAEELIKVRQIQEKLEEFINSLNQE 970
>gi|257877910|ref|ZP_05657563.1| peptidase M41 [Enterococcus casseliflavus EC20]
gi|257812076|gb|EEV40896.1| peptidase M41 [Enterococcus casseliflavus EC20]
Length = 702
Score = 36.5 bits (82), Expect = 10.0, Method: Composition-based stats.
Identities = 12/100 (12%), Positives = 34/100 (34%), Gaps = 12/100 (12%)
Query: 379 EMQSALYQQLGRFPGHEKKMLDHFQKYPNALAE--LRAPIFEDKVIDHILKSVQI----- 431
E+ + + L ++++ + +AE L + K I + + ++
Sbjct: 577 EIDQEVRKILMDAHQKAHEIIEEHRAQHKLIAEKLLEHETLDAKAIKSLFEEGKMPEGTE 636
Query: 432 -----VDRKVTFDQLFDNSSESSPEKLLDKSSKVETFQSE 466
++ TF++ E EK + + ++
Sbjct: 637 SSEYPSEKAQTFEEAKRALEEKDAEKQAAEKHSEDAPSND 676
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.306 0.106 0.244
Lambda K H
0.267 0.0327 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,708,743,737
Number of Sequences: 14124377
Number of extensions: 72594234
Number of successful extensions: 450944
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 3516
Number of HSP's successfully gapped in prelim test: 7227
Number of HSP's that attempted gapping in prelim test: 387947
Number of HSP's gapped (non-prelim): 38139
length of query: 473
length of database: 4,842,793,630
effective HSP length: 143
effective length of query: 330
effective length of database: 2,823,007,719
effective search space: 931592547270
effective search space used: 931592547270
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 82 (36.5 bits)