RPSBLAST alignment of GI: 254780897 and protein with PDBid: 2d3o
>2d3o_1 Trigger factor, TF; ribosome, nascent chain, protein folding, SRP; 3.35A {Deinococcus radiodurans} PDB: 2aar_7 Length = 112
Score = 67.5 bits (165), Expect = 6e-12
Identities = 22/123 (17%), Positives = 48/123 (39%), Gaps = 12/123 (9%)
Query: 1 MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
M + EG K E V +P+ + ++++ + + GFRPGK P I++ GK
Sbjct: 1 MAELIS-KEGNKVEFKVSVPAAEVNRAYDQVWAGLARDVRVPGFRPGKAPRKVIENRVGK 59
Query: 61 S-ILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYD 119
+ S+ D +++ + L + ++ + +S + + +
Sbjct: 60 GYVESQVRDRLLETHYSQGLRELGLNLV-DATVDPQDVQSG---------QAFEFTVKGE 109
Query: 120 ILP 122
P
Sbjct: 110 TYP 112