RPSBLAST alignment of GI: 254780897 and SCOP domain: d1t11a1

Alignment

>d1t11a1 a.223.1.1 (A:248-376) Trigger factor, C-terminal domain {Vibrio cholerae [TaxId: 666]} Length = 129

 Score = 63.4 bits (154), Expect = 4e-11
 Identities = 24/133 (18%), Positives = 65/133 (48%), Gaps = 8/133 (6%)

Query: 257 VNNDLAVRLGFESES--AMRGLCSQKIKQHSEFLVRQKVKRQILDYISNKYTFDVPESLV 314
           +N++   R G       A++    + +++  +  ++ ++K Q ++ +  +    VP +L+
Sbjct: 1   LNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAIEGLVKENEIQVPSALI 60

Query: 315 ENEYNGILQKVRFEMSSANQKSQNVDSIDEEDLQYYHMLAKRRVLTGIVLGTIGEKNNIE 374
           + E N + Q+             NV++  +   + +   AKRRV+ G++LG +   + ++
Sbjct: 61  DQEINVLRQQAAQRFG------GNVEAAAQLPRELFEEQAKRRVVVGLLLGEVIRTHELK 114

Query: 375 VTEEEMQSALYQQ 387
             EE++++ + + 
Sbjct: 115 ADEEKVKALITEM 127

SCOP domain information

class: All alpha proteins
fold: Triger factor/SurA peptide-binding domain-like
superfamily: Triger factor/SurA peptide-binding domain-like
family: TF C-terminus
domain: Trigger factor, C-terminal domain
species: Vibrio cholerae [TaxId: 666]