RPSBLAST alignment of GI: 254780897 and SCOP domain: d1t11a2

Alignment

 Score = 77.7 bits (191), Expect = 2e-15
 Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 9/136 (6%)

Query: 1   MQVIEKFSEGLKRELDVIIPSNRLTDSFNERIEDIRSKANIKGFRPGKVPLSHIKSLYGK 60
           MQV  +  EGL+R L++ +P+  + D+    + +I       GFR GKVP+  +  +YGK
Sbjct: 1   MQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK 60

Query: 61  SILSETIDEIIKEIVPEILSKRDERAAMRPSITINEGESDITSGLIEGTVDLKLRLSYDI 120
           ++  + + E+++    E + K     A  P+    E              DL    ++++
Sbjct: 61  AVRQDVLGEVMQRHFIEAIVKEKINPAGAPTFAPVEIGEGK---------DLVFTATFEV 111

Query: 121 LPQIEISSFDDLQVTQ 136
            P++E+   +++ V +
Sbjct: 112 YPEVELKGLENIAVEK 127

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosome binding domain-like
superfamily: Trigger factor ribosome-binding domain
family: Trigger factor ribosome-binding domain
domain: Trigger factor ribosome-binding domain
species: Vibrio cholerae [TaxId: 666]