HHsearch alignment for GI: 254780898 and conserved domain: cd01447
>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain. This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.
Probab=95.77 E-value=0.017 Score=36.15 Aligned_cols=82 Identities=18% Similarity=0.177 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCC-C-EEEEEECCCC---CCCCHHHHHHHHHHHHCCCCCEE
Q ss_conf 99899999999749938997378787654445799999669-8-4998752688---89898999999999942799499
Q gi|254780898|r 58 PNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLG-I-QLINFPLSAT---RELNDEQIKQLISILKTAPKPLL 132 (207)
Q Consensus 58 P~~~~~~~l~k~~GIktIInLr~~~~~~~~~~e~~~~~~~g-i-~~i~ip~~~~---~~~~~~~i~~~~~il~~~~~PVl 132 (207)
T Consensus 1 Isp~ea~~ll~~~~~-~lIDVR~~~E~----------~~~G~I~gA~~ip~~~l~~~~~~~~----~~~~~~~~~~~~iv 65 (103)
T cd01447 1 LSPEDARALLGSPGV-LLVDVRDPREL----------ERTGMIPGAFHAPRGMLEFWADPDS----PYHKPAFAEDKPFV 65 (103)
T ss_pred CCHHHHHHHHHCCCE-EEEECCCHHHH----------HHCCCCCCCEECCHHHHHHHHCCCC----HHHHHHCCCCCEEE
T ss_conf 988999999838895-99989888999----------8248678888077767777628230----44565218888799
Q ss_pred EECCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 9828998889999999999983999
Q gi|254780898|r 133 IHCKSGADRTGLASAVYLYIVAHYP 157 (207)
Q Consensus 133 VHC~aG~~RTG~~~alyli~~~g~~ 157 (207)
T Consensus 66 ~~C~~G~-RS~~aa-~~L-~~~Gy~ 87 (103)
T cd01447 66 FYCASGW-RSALAG-KTL-QDMGLK 87 (103)
T ss_pred EECCCCC-HHHHHH-HHH-HHCCCC
T ss_conf 9869980-599999-999-985984