HHsearch results for GI: 254780898 and protein with PDBid: 1jln_A
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Probab=98.30 E-value=9e-07 Score=61.63 Aligned_cols=121 Identities=12% Similarity=0.096 Sum_probs=72.4
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCCCC-----CCCHHHHHH---------------------------HHHCCCEEEEEE-
Q ss_conf 98999999997499389973787876-----544457999---------------------------996698499875-
Q gi|254780898|r 59 NGTFIEYLKKEYGIKSILNLRGKLPE-----SWHKEEEKA---------------------------ANDLGIQLINFP- 105 (207)
Q Consensus 59 ~~~~~~~l~k~~GIktIInLr~~~~~-----~~~~~e~~~---------------------------~~~~gi~~i~ip- 105 (207)
+-.+|..++-+.++++||.|....+. .++..+... .+..-+.++++.
T Consensus 113 T~~dFW~MV~e~~v~~IVmLt~~e~~~~~c~~y~p~~~~~~g~~~V~~~~~~~~~~~~~r~~~~~~~~~~~~V~~~~~~~ 192 (297)
T 1jln_A 113 TVNDFWQMVWQEDSPVIVMITKLKEKNEKCVLYWPEKRGIYGKVEVLVTGVTECDNYTIRNLVLKQGSHTQHVKHYWYTS 192 (297)
T ss_dssp GHHHHHHHHHHTTCCEEEECSCSBSSSBCCCCCSCSSEEEETTEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECC
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEECC
T ss_conf 69999999984689889987881118814677798556766328999999997587799973311688616999998788
Q ss_pred CCCCCCC-CHHHHHHHHHHHHC------CCCCEEEECCCCCCHHHHHHHHHHHHH----C-CCCHHHHHHHHHH-CCCCC
Q ss_conf 2688898-98999999999942------799499982899888999999999998----3-9998999996100-02642
Q gi|254780898|r 106 LSATREL-NDEQIKQLISILKT------APKPLLIHCKSGADRTGLASAVYLYIV----A-HYPKEEAHRQLSM-LYGHF 172 (207)
Q Consensus 106 ~~~~~~~-~~~~i~~~~~il~~------~~~PVlVHC~aG~~RTG~~~alyli~~----~-g~~~~eA~~el~~-~ygh~ 172 (207)
+++.+.| +...+..++..+.. .++|++|||.+|.||||+++|+..+.. . -.+..++...|+- |.+-+
T Consensus 193 Wpd~~vP~~~~~~l~~i~~v~~~~~~~~~~~PivVHCsaGvGRtG~fial~~~~~~l~~~~~vdv~~~V~~lR~qR~~~V 272 (297)
T 1jln_A 193 WPDHKTPDSAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRVDRGGMV 272 (297)
T ss_dssp SCTTSSCSCSHHHHHHHHHHHHHHHTCTTSCCEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHHHSTTSS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
T ss_conf 89889889868999999999998751468997688727874221089999999999861698799999999984444547
Q ss_pred CCCCHHH
Q ss_conf 6742459
Q gi|254780898|r 173 PVLKTIT 179 (207)
Q Consensus 173 ~~~~~~~ 179 (207)
.-..+|.
T Consensus 273 qt~~QY~ 279 (297)
T 1jln_A 273 QTSEQYE 279 (297)
T ss_dssp CSHHHHH
T ss_pred CCHHHHH
T ss_conf 9999999