HHsearch results for GI: 254780898 and protein with PDBid: 1lar_A
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=98.34 E-value=9.1e-07 Score=61.59 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCCCC------CCCHHHHH-HH-----------------------------HHCCCEEE
Q ss_conf 98999999997499389973787876------54445799-99-----------------------------96698499
Q gi|254780898|r 59 NGTFIEYLKKEYGIKSILNLRGKLPE------SWHKEEEK-AA-----------------------------NDLGIQLI 102 (207)
Q Consensus 59 ~~~~~~~l~k~~GIktIInLr~~~~~------~~~~~e~~-~~-----------------------------~~~gi~~i 102 (207)
+-++|..++-+.++++||.|....+. .++..+.. .. +..-|.++
T Consensus 387 Ti~dFW~Mv~~~~v~~IVmL~~~~e~~~~kc~~Ywp~~~~~~~g~~~V~~~~~~~~~~~~~r~l~v~~~~~~~~r~V~~~ 466 (575)
T 1lar_A 387 STEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQF 466 (575)
T ss_dssp GHHHHHHHHHHTTCCEEEECSCSEETTEESSCCCSCSSSCEEETTEEEEEEEEEECSSEEEEEEEEEETTTTEEEEEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCEEEEEEEEEECCCEEEEEEEEEECCCCCEEEEEEE
T ss_conf 69999999986488789981354328842345447767883425589999999966977999999998999986999999
Q ss_pred EEE-CCCCCCC-CHHHHHHHHHHHH------CCCCCEEEECCCCCCHHHHHHHHHHHHH----CC-CCHHHHHHHHHH-C
Q ss_conf 875-2688898-9899999999994------2799499982899888999999999998----39-998999996100-0
Q gi|254780898|r 103 NFP-LSATREL-NDEQIKQLISILK------TAPKPLLIHCKSGADRTGLASAVYLYIV----AH-YPKEEAHRQLSM-L 168 (207)
Q Consensus 103 ~ip-~~~~~~~-~~~~i~~~~~il~------~~~~PVlVHC~aG~~RTG~~~alyli~~----~g-~~~~eA~~el~~-~ 168 (207)
++. +++.+.| +...+..++..+. ..++||+|||.+|.||||+++|+.-... .| .+..++.+.|+- |
T Consensus 467 ~y~~Wpd~~vP~~~~~~l~li~~v~~~~~~~~~~~PivVHCs~GvgRtG~f~al~~~i~~l~~~~~vdv~~~v~~lR~qR 546 (575)
T 1lar_A 467 QFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQR 546 (575)
T ss_dssp EECCSCSSSCCSSCHHHHHHHHHHHHHHHHTTCCSCEEEESSSSSSHHHHHHHHHHHHHHHHHHSEECHHHHHHHHTTTS
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC
T ss_conf 98999988907987899999999999998649989999993998369999999999999986069978999999998637
Q ss_pred CCCCCCCCHH
Q ss_conf 2642674245
Q gi|254780898|r 169 YGHFPVLKTI 178 (207)
Q Consensus 169 ygh~~~~~~~ 178 (207)
.+-+.-..+|
T Consensus 547 ~~~V~t~~QY 556 (575)
T 1lar_A 547 PAMVQTEDQY 556 (575)
T ss_dssp TTSSCSHHHH
T ss_pred CCCCCCHHHH
T ss_conf 2303999999