HHsearch results for GI: 254780898 and protein with PDBid: 1lar_A
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=98.16 E-value=3.3e-06 Score=58.05 Aligned_cols=121 Identities=9% Similarity=0.068 Sum_probs=73.6
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCCCC------CCCHHHHH-HH-----------------------------HHCCCEEE
Q ss_conf 98999999997499389973787876------54445799-99-----------------------------96698499
Q gi|254780898|r 59 NGTFIEYLKKEYGIKSILNLRGKLPE------SWHKEEEK-AA-----------------------------NDLGIQLI 102 (207)
Q Consensus 59 ~~~~~~~l~k~~GIktIInLr~~~~~------~~~~~e~~-~~-----------------------------~~~gi~~i 102 (207)
+-++|..++-+.+++.||-|....|. .++..+.. .+ +..-+.|+
T Consensus 98 T~~dFW~MIw~~~~~~IVmL~~~~E~~~~kc~~YwP~~~~~~~g~~~v~~~~~~~~~~~~~r~l~l~~~~~~~~r~v~h~ 177 (575)
T 1lar_A 98 TMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGTETCGLIQVTLLDTVELATYTVRTFALHKSGSSEKRELRQF 177 (575)
T ss_dssp THHHHHHHHHHTTCCEEEECSCSEETTEECCCCCSCSSSEEEETTEEEEEEEEEECSSEEEEEEEEEETTSCCEEEEEEE
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEEEEECCCCCCEEEEEE
T ss_conf 89999999840699889988883116733562578999962123289999999987985999999998899981899999
Q ss_pred EE-ECCCCCCC-CHHHHHHHHHHHHC----CCCCEEEECCCCCCHHHHHHHHHHHH-----HCCCCHHHHHHHHHH-CCC
Q ss_conf 87-52688898-98999999999942----79949998289988899999999999-----839998999996100-026
Q gi|254780898|r 103 NF-PLSATREL-NDEQIKQLISILKT----APKPLLIHCKSGADRTGLASAVYLYI-----VAHYPKEEAHRQLSM-LYG 170 (207)
Q Consensus 103 ~i-p~~~~~~~-~~~~i~~~~~il~~----~~~PVlVHC~aG~~RTG~~~alyli~-----~~g~~~~eA~~el~~-~yg 170 (207)
++ .+++.+.| +...+..|+..+.. ..+|++|||.+|.||||+++|+.-+. ....+..+....|+- |.+
T Consensus 178 ~y~~Wpd~g~P~~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvgRtgtf~~id~~~~~~~~~~~v~v~~~v~~lR~qR~~ 257 (575)
T 1lar_A 178 QFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNY 257 (575)
T ss_dssp EECCSCSSSCCSCSHHHHHHHHHHHHHSCTTCCCEEEESSSSSSHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHTTSTT
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
T ss_conf 97974888937998999999999985467899998998899987324899999999999706987999999999975404
Q ss_pred CCCCCCHHH
Q ss_conf 426742459
Q gi|254780898|r 171 HFPVLKTIT 179 (207)
Q Consensus 171 h~~~~~~~~ 179 (207)
-+....+|.
T Consensus 258 ~vqt~~Qy~ 266 (575)
T 1lar_A 258 MVQTEDQYV 266 (575)
T ss_dssp SSCSHHHHH
T ss_pred CCCCHHHHH
T ss_conf 468989999