HHsearch results for GI: 254780898 and protein with PDBid: 1rxd_A
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=99.73 E-value=3.5e-17 Score=127.17 Aligned_cols=109 Identities=17% Similarity=0.308 Sum_probs=86.7
Q ss_pred CCCCCH---HHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHH-----C
Q ss_conf 389998---99999999749938997378787654445799999669849987526888989899999999994-----2
Q gi|254780898|r 55 SAQPNG---TFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELNDEQIKQLISILK-----T 126 (207)
Q Consensus 55 S~qP~~---~~~~~l~k~~GIktIInLr~~~~~~~~~~e~~~~~~~gi~~i~ip~~~~~~~~~~~i~~~~~il~-----~ 126 (207)
...|.. +++...++++||++||||..... +.+..+..|+++.++|++|...|+.+.+..+...++ .
T Consensus 21 t~~P~~~t~~~f~~~l~~~gi~~Iv~l~e~~y------~~~~~~~~gi~~~~~p~~D~~~p~~~~l~~~~~~~~~~~~~~ 94 (159)
T 1rxd_A 21 THNPTNATLNKFIEELKKYGVTTIVRVCEATY------DTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREE 94 (159)
T ss_dssp CCCCCGGGHHHHHHHHHHTTEEEEEECSCCCS------CCHHHHHTTCEEEECCC--CCCCCHHHHHHHHHHHHHHHHHS
T ss_pred ECCCCCCHHHHHHHHHHHCCCCEEEECCCCCC------CHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 65998110999999999859979998999978------869999739479997546988969999999999999999758
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH-CCC
Q ss_conf 79949998289988899999999999839998999996100-026
Q gi|254780898|r 127 APKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQLSM-LYG 170 (207)
Q Consensus 127 ~~~PVlVHC~aG~~RTG~~~alyli~~~g~~~~eA~~el~~-~yg 170 (207)
.++||+|||++|.||||+++|+|++. .|++.++|++.+.- |.+
T Consensus 95 ~~~~V~VHC~aG~gRSgt~~a~yl~~-~g~~~~~Al~~vr~~R~~ 138 (159)
T 1rxd_A 95 PGCCIAVHCVAGLGRAPVLVALALIE-GGMKYEDAVQFIRQKRRG 138 (159)
T ss_dssp TTCEEEEECSSSSTTHHHHHHHHHHH-TTCCHHHHHHHHHTTCTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHCCC
T ss_conf 99978978599988799999999999-297999999999986889