HHsearch results for GI: 254780898 and protein with PDBid: 1yn9_A
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=99.68 E-value=3.5e-16 Score=120.82 Aligned_cols=98 Identities=18% Similarity=0.276 Sum_probs=81.4
Q ss_pred CCCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHH-----CCCCCEEEECCCCCCHHHH
Q ss_conf 49938997378787654445799999669849987526888989899999999994-----2799499982899888999
Q gi|254780898|r 70 YGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELNDEQIKQLISILK-----TAPKPLLIHCKSGADRTGL 144 (207)
Q Consensus 70 ~GIktIInLr~~~~~~~~~~e~~~~~~~gi~~i~ip~~~~~~~~~~~i~~~~~il~-----~~~~PVlVHC~aG~~RTG~ 144 (207)
..|+.||||.... ..|+ .+..++.||+|+++|+.+...|+.+.+.+|++.++ +.+++|+|||.+|.+|||+
T Consensus 54 ~~i~~Vi~Lt~~~--~~Y~--~~~~~~~gi~y~~i~~~d~~~P~~~~i~~f~~~v~~~~~~~~~~~V~VHC~~G~~Rtg~ 129 (169)
T 1yn9_A 54 PSIGAIIDLTNTS--KYYD--GVHFLRAGLLYKKIQVPGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGY 129 (169)
T ss_dssp TTEEEEEECCSCS--CSCC--THHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHHHHHSTTSEEEEECSSSSHHHHH
T ss_pred CCEEEEEECCCCC--CCCC--HHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
T ss_conf 8703999857998--7759--89986559779998838999898599999999999999859998699988999974799
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf 999999998399989999961000264
Q gi|254780898|r 145 ASAVYLYIVAHYPKEEAHRQLSMLYGH 171 (207)
Q Consensus 145 ~~alyli~~~g~~~~eA~~el~~~ygh 171 (207)
++++|||...||+.++|++.+.-..++
T Consensus 130 li~~YL~~~~~~s~~~Ai~~~~~~Rp~ 156 (169)
T 1yn9_A 130 MVCRYLMHTLGIAPQEAIDRFEKARGH 156 (169)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf 999999997299999999999987899