HHsearch results for GI: 254780898 and protein with PDBid: 1yn9_A

>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=99.68  E-value=3.5e-16  Score=120.82  Aligned_cols=98  Identities=18%  Similarity=0.276  Sum_probs=81.4

Q ss_pred             CCCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHH-----CCCCCEEEECCCCCCHHHH
Q ss_conf             49938997378787654445799999669849987526888989899999999994-----2799499982899888999
Q gi|254780898|r   70 YGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELNDEQIKQLISILK-----TAPKPLLIHCKSGADRTGL  144 (207)
Q Consensus        70 ~GIktIInLr~~~~~~~~~~e~~~~~~~gi~~i~ip~~~~~~~~~~~i~~~~~il~-----~~~~PVlVHC~aG~~RTG~  144 (207)
                      ..|+.||||....  ..|+  .+..++.||+|+++|+.+...|+.+.+.+|++.++     +.+++|+|||.+|.+|||+
T Consensus        54 ~~i~~Vi~Lt~~~--~~Y~--~~~~~~~gi~y~~i~~~d~~~P~~~~i~~f~~~v~~~~~~~~~~~V~VHC~~G~~Rtg~  129 (169)
T 1yn9_A           54 PSIGAIIDLTNTS--KYYD--GVHFLRAGLLYKKIQVPGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGY  129 (169)
T ss_dssp             TTEEEEEECCSCS--CSCC--THHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHHHHHSTTSEEEEECSSSSHHHHH
T ss_pred             CCEEEEEECCCCC--CCCC--HHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
T ss_conf             8703999857998--7759--89986559779998838999898599999999999999859998699988999974799


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHCCCC
Q ss_conf             999999998399989999961000264
Q gi|254780898|r  145 ASAVYLYIVAHYPKEEAHRQLSMLYGH  171 (207)
Q Consensus       145 ~~alyli~~~g~~~~eA~~el~~~ygh  171 (207)
                      ++++|||...||+.++|++.+.-..++
T Consensus       130 li~~YL~~~~~~s~~~Ai~~~~~~Rp~  156 (169)
T 1yn9_A          130 MVCRYLMHTLGIAPQEAIDRFEKARGH  156 (169)
T ss_dssp             HHHHHHHHHHCCCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf             999999997299999999999987899