HHsearch results for GI: 254780898 and protein with PDBid: 2cm2_A
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* 2f71_A* ...
Probab=98.24 E-value=6.1e-06 Score=56.38 Aligned_cols=121 Identities=10% Similarity=0.155 Sum_probs=71.3
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCCCC------CCCHHHHHH---HHH-------------------------------CC
Q ss_conf 98999999997499389973787876------544457999---996-------------------------------69
Q gi|254780898|r 59 NGTFIEYLKKEYGIKSILNLRGKLPE------SWHKEEEKA---AND-------------------------------LG 98 (207)
Q Consensus 59 ~~~~~~~l~k~~GIktIInLr~~~~~------~~~~~e~~~---~~~-------------------------------~g 98 (207)
+-.+|..++-+.++++||.|....|. .++..+... ... .-
T Consensus 97 T~~dFW~MV~e~~~~~IVmL~~~~E~~~~k~~~y~p~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~l~v~~~~~~~~r~ 176 (304)
T 2cm2_A 97 TCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETRE 176 (304)
T ss_dssp SHHHHHHHHHHHTBCEEEECSCSEETTEECSCCCSCSSTTSCEEETTTTEEEEEEEEEECSSEEEEEEEEEETTTCCEEE
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCEECCCCCCCCCCCCCEEECCCEEEEEEEEEEECCCEEEEEEEEEECCCCCCEE
T ss_conf 49999999984599889985464369985355768977896236546269999989970487599999999778886479
Q ss_pred CEEEEEE-CCCCCCC-CHHHHHHHHHHHHC------CCCCEEEECCCCCCHHHHHHHHHH---HHHC-----CCCHHHHH
Q ss_conf 8499875-2688898-98999999999942------799499982899888999999999---9983-----99989999
Q gi|254780898|r 99 IQLINFP-LSATREL-NDEQIKQLISILKT------APKPLLIHCKSGADRTGLASAVYL---YIVA-----HYPKEEAH 162 (207)
Q Consensus 99 i~~i~ip-~~~~~~~-~~~~i~~~~~il~~------~~~PVlVHC~aG~~RTG~~~alyl---i~~~-----g~~~~eA~ 162 (207)
+.|+++. +++.+.| +...+..++..... ..+||+|||.+|.||||+++|+.. ++.+ ..+..++.
T Consensus 177 v~h~~y~~Wpd~~~P~~~~~~~~~~~~v~~~~~~~~~~~PivVHCs~GvgRtGtf~ald~~~~~l~~~~~~~~vdV~~~v 256 (304)
T 2cm2_A 177 ILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL 256 (304)
T ss_dssp EEEEEECCCCSSSCCSSSHHHHHHHHHHHHHTTTSTTSBCEEEESSSSSSHHHHHHHHHHHHHHHHHSSCGGGCCHHHHH
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEECHHHHH
T ss_conf 98984589976797998799999999999973017888978998899995245999999999999852688736699999
Q ss_pred HHHHH-CCCCCCCCCHHH
Q ss_conf 96100-026426742459
Q gi|254780898|r 163 RQLSM-LYGHFPVLKTIT 179 (207)
Q Consensus 163 ~el~~-~ygh~~~~~~~~ 179 (207)
..|+- |++-+.-..+|.
T Consensus 257 ~~lR~qR~~~Vqt~~QY~ 274 (304)
T 2cm2_A 257 LEMRKFRMGLIQTADQLR 274 (304)
T ss_dssp HHHTTTSTTCSCSHHHHH
T ss_pred HHHHHHCCCCCCCHHHHH
T ss_conf 999853753169999999