HHsearch results for GI: 254780898 and protein with PDBid: 2cm2_A

>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* 2f71_A* ...
Probab=98.24  E-value=6.1e-06  Score=56.38  Aligned_cols=121  Identities=10%  Similarity=0.155  Sum_probs=71.3

Q ss_pred             CHHHHHHHHHHCCCCEEEECCCCCCC------CCCHHHHHH---HHH-------------------------------CC
Q ss_conf             98999999997499389973787876------544457999---996-------------------------------69
Q gi|254780898|r   59 NGTFIEYLKKEYGIKSILNLRGKLPE------SWHKEEEKA---AND-------------------------------LG   98 (207)
Q Consensus        59 ~~~~~~~l~k~~GIktIInLr~~~~~------~~~~~e~~~---~~~-------------------------------~g   98 (207)
                      +-.+|..++-+.++++||.|....|.      .++..+...   ...                               .-
T Consensus        97 T~~dFW~MV~e~~~~~IVmL~~~~E~~~~k~~~y~p~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~l~v~~~~~~~~r~  176 (304)
T 2cm2_A           97 TCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETRE  176 (304)
T ss_dssp             SHHHHHHHHHHHTBCEEEECSCSEETTEECSCCCSCSSTTSCEEETTTTEEEEEEEEEECSSEEEEEEEEEETTTCCEEE
T ss_pred             HHHHHHHHHHHCCCCEEEECCCCCCCCEECCCCCCCCCCCCCEEECCCEEEEEEEEEEECCCEEEEEEEEEECCCCCCEE
T ss_conf             49999999984599889985464369985355768977896236546269999989970487599999999778886479


Q ss_pred             CEEEEEE-CCCCCCC-CHHHHHHHHHHHHC------CCCCEEEECCCCCCHHHHHHHHHH---HHHC-----CCCHHHHH
Q ss_conf             8499875-2688898-98999999999942------799499982899888999999999---9983-----99989999
Q gi|254780898|r   99 IQLINFP-LSATREL-NDEQIKQLISILKT------APKPLLIHCKSGADRTGLASAVYL---YIVA-----HYPKEEAH  162 (207)
Q Consensus        99 i~~i~ip-~~~~~~~-~~~~i~~~~~il~~------~~~PVlVHC~aG~~RTG~~~alyl---i~~~-----g~~~~eA~  162 (207)
                      +.|+++. +++.+.| +...+..++.....      ..+||+|||.+|.||||+++|+..   ++.+     ..+..++.
T Consensus       177 v~h~~y~~Wpd~~~P~~~~~~~~~~~~v~~~~~~~~~~~PivVHCs~GvgRtGtf~ald~~~~~l~~~~~~~~vdV~~~v  256 (304)
T 2cm2_A          177 ILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVL  256 (304)
T ss_dssp             EEEEEECCCCSSSCCSSSHHHHHHHHHHHHHTTTSTTSBCEEEESSSSSSHHHHHHHHHHHHHHHHHSSCGGGCCHHHHH
T ss_pred             EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEECHHHHH
T ss_conf             98984589976797998799999999999973017888978998899995245999999999999852688736699999


Q ss_pred             HHHHH-CCCCCCCCCHHH
Q ss_conf             96100-026426742459
Q gi|254780898|r  163 RQLSM-LYGHFPVLKTIT  179 (207)
Q Consensus       163 ~el~~-~ygh~~~~~~~~  179 (207)
                      ..|+- |++-+.-..+|.
T Consensus       257 ~~lR~qR~~~Vqt~~QY~  274 (304)
T 2cm2_A          257 LEMRKFRMGLIQTADQLR  274 (304)
T ss_dssp             HHHTTTSTTCSCSHHHHH
T ss_pred             HHHHHHCCCCCCCHHHHH
T ss_conf             999853753169999999