HHsearch results for GI: 254780898 and protein with PDBid: 2nlk_A
>2nlk_A Protein tyrosine phosphatase, receptor type, G variant (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1249, HPTPG, RPTPG; 2.40A {Homo sapiens}
Probab=98.00 E-value=2.8e-05 Score=52.26 Aligned_cols=121 Identities=10% Similarity=0.067 Sum_probs=70.5
Q ss_pred CHHHHHHHHHHCCCCEEEECCCCCCC------CCCHHHH-HHH-------------------------------------
Q ss_conf 98999999997499389973787876------5444579-999-------------------------------------
Q gi|254780898|r 59 NGTFIEYLKKEYGIKSILNLRGKLPE------SWHKEEE-KAA------------------------------------- 94 (207)
Q Consensus 59 ~~~~~~~l~k~~GIktIInLr~~~~~------~~~~~e~-~~~------------------------------------- 94 (207)
+-.+|..++-+.++++||-|....|. .++..+. +..
T Consensus 106 Ti~dFW~MVw~~~~~~IVmLt~~~E~~~~kc~~YwP~~~~~~~g~~~V~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 185 (627)
T 2nlk_A 106 TFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPK 185 (627)
T ss_dssp GHHHHHHHHHHHTCCEEEECSCSEETTEECCCCCSCSSSEEEETTEEEEEEEEEECSSEEEEEEEEEETTSCCCCTTCTT
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEECCEEEEEEEEEECCCEEEEEEEEEEEEEEECCCCCCC
T ss_conf 19999999870489989988986318753475678999970756789999999961665888999997676411235666
Q ss_pred ---HHCCCEEEEE-ECCCCCCC-CHHHHHHHHHHHHC----CCCCEEEECCCCCCHHHHHHHHHHHHH-----CCCCHHH
Q ss_conf ---9669849987-52688898-98999999999942----799499982899888999999999998-----3999899
Q gi|254780898|r 95 ---NDLGIQLINF-PLSATREL-NDEQIKQLISILKT----APKPLLIHCKSGADRTGLASAVYLYIV-----AHYPKEE 160 (207)
Q Consensus 95 ---~~~gi~~i~i-p~~~~~~~-~~~~i~~~~~il~~----~~~PVlVHC~aG~~RTG~~~alyli~~-----~g~~~~e 160 (207)
+..-+.|+++ .+++.+.| +...+..+++.+.. .++|++|||.+|.||||+++++-.+.. ...+..+
T Consensus 186 ~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~PivVHCsaGvGRtGtfi~id~~l~~l~~~~~v~v~~ 265 (627)
T 2nlk_A 186 GRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLG 265 (627)
T ss_dssp CCTTEEEEEEEEECCCCSSSSCSCSHHHHHHHHHHHHTCCSSCCCEEEECSSSSHHHHHHHHHHHHHHHHHHHSEECHHH
T ss_pred CCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHCCCCCCHHH
T ss_conf 77861799999869698689989989999999999862169999999990899754134559987899985579889999
Q ss_pred HHHHHHH-CCCCCCCCCHHH
Q ss_conf 9996100-026426742459
Q gi|254780898|r 161 AHRQLSM-LYGHFPVLKTIT 179 (207)
Q Consensus 161 A~~el~~-~ygh~~~~~~~~ 179 (207)
+...|+- |.+-+-...+|.
T Consensus 266 ~v~~lR~qR~~~Vqt~~QY~ 285 (627)
T 2nlk_A 266 FLKHIRTQRNYLVQTEEQYI 285 (627)
T ss_dssp HHHHHTTTSTTSSCCHHHHH
T ss_pred HHHHHHHHHHCCCCCHHHHH
T ss_conf 99999875023468899999