RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780898|ref|YP_003065311.1| hypothetical protein
CLIBASIA_03975 [Candidatus Liberibacter asiaticus str. psy62]
         (207 letters)



>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress
           (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 151

 Score = 71.3 bits (174), Expect = 5e-14
 Identities = 36/147 (24%), Positives = 54/147 (36%), Gaps = 15/147 (10%)

Query: 43  NFHAVVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLI 102
           NF  V    I+RS  P+     +L+   G++SI+ L    PE + +   +     GI+L 
Sbjct: 7   NFSMVDNG-IFRSGFPDSANFSFLQT-LGLRSIIYLC---PEPYPESNLQFLKSNGIRLF 61

Query: 103 NFPLSATRELNDEQIKQLIS-----ILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYP 157
            F +   +E         I      +L     P+LIHCK G  RTG        +   + 
Sbjct: 62  QFGIEGNKEPFVNIPDHKIRMALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKL-QKWC 120

Query: 158 KEEAHRQLSMLYGHFPVLKTITMDITF 184
                 +    Y  F   K    D  F
Sbjct: 121 LTSIFDE----YQRFAAAKARVSDQRF 143


>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate
           phosphohydrolase (phytase) PhyA {Selenomonas ruminantium
           [TaxId: 971]}
          Length = 313

 Score = 51.2 bits (122), Expect = 7e-08
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 14/131 (10%)

Query: 69  EYGIKSILNLR-GKLPESWHKE-------EEKAANDLGIQLINFPLSATRELNDEQIKQL 120
            +    I  L   KLPE            E++ A   G++      +       E I + 
Sbjct: 143 LHKTVYIAPLGKHKLPEGGEVRRVQKVQTEQEVAEAAGMRYFRIAATDHVWPTPENIDRF 202

Query: 121 ISILKTAPK--PLLIHCKSGADRTGLASAVYLYIVAHY---PKEEAHRQLSMLYGHFPVL 175
           ++  +T P+   L  HC++G  RT     +   ++ +     K+  +RQ  +   ++   
Sbjct: 203 LAFYRTLPQDAWLHFHCEAGVGRTTAFMVMTD-MLKNPSVSLKDILYRQHEIGGFYYGEF 261

Query: 176 KTITMDITFEK 186
              T D    K
Sbjct: 262 PIKTKDKDSWK 272


>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 178

 Score = 48.2 bits (114), Expect = 5e-07
 Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 7/130 (5%)

Query: 41  TQNFHAVVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQ 100
           +Q  + V P  IY         I  L+K  GI  +LN                  D GI 
Sbjct: 20  SQPCNEVTPR-IYVGNASVAQDIPKLQK-LGITHVLNAAEGRSFMHVNTNANFYKDSGIT 77

Query: 101 LINFPLSATRELN-----DEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAH 155
            +    + T+E N     +     +   L      +L+HC+ G  R+      YL +   
Sbjct: 78  YLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQK 137

Query: 156 YPKEEAHRQL 165
              + A   +
Sbjct: 138 MDVKSALSIV 147


>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 182

 Score = 47.0 bits (111), Expect = 1e-06
 Identities = 23/137 (16%), Positives = 49/137 (35%), Gaps = 21/137 (15%)

Query: 43  NFHAVVPHEIYRSAQPNGT--------------FIEYLKKEYGIKSILNLRGKLPESWHK 88
           + + ++P        P+                +I+Y K  + + +I+ L  ++ ++   
Sbjct: 17  DLNWIIPDRFIAFCGPHSRARLESGYHQHSPETYIQYFKN-HNVTTIIRLNKRMYDA--- 72

Query: 89  EEEKAANDLGIQLINFPLSATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAV 148
              K   D G    +   +      D  +K+ + I + A   + +H K+G  RTG   A 
Sbjct: 73  ---KRFTDAGFDHHDLFFADGSTPTDAIVKEFLDICENAEGAIAVHSKAGLGRTGTLIAC 129

Query: 149 YLYIVAHYPKEEAHRQL 165
           Y+         E    +
Sbjct: 130 YIMKHYRMTAAETIAWV 146


>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB
           {Mycobacterium tuberculosis [TaxId: 1773]}
          Length = 272

 Score = 40.2 bits (93), Expect = 1e-04
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 1/109 (0%)

Query: 45  HAVVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINF 104
             +  H +      +    +    E   K +L   G   ES    +             +
Sbjct: 68  DGIDVHLLPFPDLADDDADDSAPHETAFKRLLTNDGSNGESGESSQSINDAATRYMTDEY 127

Query: 105 PLSATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIV 153
               TR      + +++++L  A +P+L HC +G DRTG   A+ L  V
Sbjct: 128 RQFPTRNGAQRALHRVVTLLA-AGRPVLTHCFAGKDRTGFVVALVLEAV 175


>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 176

 Score = 37.3 bits (86), Expect = 9e-04
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 68  KEYGIKSILNL--RGKLPESWHKEEEKAANDLGIQLINFPLSATRELNDEQIKQLISILK 125
           K  GI+ I     RG+L +             GI   + P++     +     +++  L 
Sbjct: 44  KSCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGTPDIASCCEIMEELT 103

Query: 126 TA---PKPLLIHCKSGADRTGLASAVYL 150
           T     +  LIH   G  R+ L +A  L
Sbjct: 104 TCLKNYRKTLIHSYGGLGRSCLVAACLL 131


>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1
           [TaxId: 9606]}
          Length = 145

 Score = 36.2 bits (83), Expect = 0.002
 Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 7/119 (5%)

Query: 47  VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106
           ++P+ ++  +  + + ++ L+   GI ++LN+    P  +    E       I + +   
Sbjct: 7   ILPY-LFLGSCSHSSDLQGLQA-CGITAVLNVSASCPNHF----EGLFRYKSIPVEDNQ- 59

Query: 107 SATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165
                   ++    I  +K +   +L+H ++G  R+      YL        +EA   +
Sbjct: 60  MVEISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFV 118


>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain
           {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 194

 Score = 33.1 bits (75), Expect = 0.017
 Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 19/114 (16%)

Query: 63  IEYLK-KEYGIKSILNL----RGKLPESWHKEEEKAANDLGIQLINFPL-----SATREL 112
             YLK  +  +  +++L    R        KE        GI+ I           T E 
Sbjct: 47  SNYLKSLKVKMSLLVDLTNTSRFYDRNDIEKE--------GIKYIKLQCKGHGECPTTEN 98

Query: 113 NDEQIKQLISILKTAP-KPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165
            +  I+      + +P + + +HC  G +RTG     +L     +  E A    
Sbjct: 99  TETFIRLCERFNERSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATF 152



 Score = 24.7 bits (53), Expect = 6.2
 Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 56  AQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEE 91
               G +++ L + YG          LP+ W  E+E
Sbjct: 159 GIYKGDYLKELFRRYGDIEEAPPPPVLPD-WCFEDE 193


>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1
           (mkp3) [TaxId: 9606]}
          Length = 144

 Score = 32.1 bits (72), Expect = 0.038
 Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 5/119 (4%)

Query: 47  VVPHEIYRSAQPNGTFIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPL 106
           ++P  +Y     + T ++ L++ +GIK ILN+   LP  +    E     + I       
Sbjct: 7   ILPF-LYLGCAKDSTNLDVLEE-FGIKYILNVTPNLPNLFENAGEFKYKQIPIS---DHW 61

Query: 107 SATRELNDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQL 165
           S        +    I   +     +L+H  +G  R+   +  YL    +    +A+  +
Sbjct: 62  SQNLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIV 120


>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human
           (Homo sapiens), pr-1 [TaxId: 9606]}
          Length = 152

 Score = 31.2 bits (70), Expect = 0.069
 Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 13/111 (11%)

Query: 62  FIEYLKKEYGIKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELNDEQIKQLI 121
           FIE LKK YG+ +I+ +     ++   E+E      GI ++++P       +++ +   +
Sbjct: 25  FIEELKK-YGVTTIVRVCEATYDTTLVEKE------GIHVLDWPFDDGAPPSNQIVDDWL 77

Query: 122 SILKT-----APKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQLSM 167
           S++K          + +HC +G  R  +  A+ L I      E+A + +  
Sbjct: 78  SLVKIKFREEPGCCIAVHCVAGLGRAPVLVALAL-IEGGMKYEDAVQFIRQ 127


>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase
           {Pseudomonas putida [TaxId: 303]}
          Length = 160

 Score = 31.0 bits (69), Expect = 0.083
 Identities = 11/77 (14%), Positives = 21/77 (27%), Gaps = 12/77 (15%)

Query: 109 TRELNDEQIKQLISILKTAPKPLLI------------HCKSGADRTGLASAVYLYIVAHY 156
           +  LND+ +  L+  L +A  P ++             C   A+R      V        
Sbjct: 1   SVRLNDQDLDILVKALNSASNPAIVLGPDVDAANANADCVMLAERLKAPVWVAPSAPRCP 60

Query: 157 PKEEAHRQLSMLYGHFP 173
                     ++     
Sbjct: 61  FPTRHPCFRGLMPAGIA 77


>d1l5ja1 a.118.15.1 (A:1-160) Aconitase B, N-terminal domain
           {Escherichia coli [TaxId: 562]}
          Length = 160

 Score = 28.2 bits (63), Expect = 0.57
 Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 15/78 (19%)

Query: 112 LNDEQIKQLISILKTAPKP-------LLIHC-KSGADRTGLASAVYL-------YIVAHY 156
           L+  Q+  L+ +LK  P         LL +    G D      A +L             
Sbjct: 22  LDANQMAALVELLKNPPAGEEEFLLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLL 81

Query: 157 PKEEAHRQLSMLYGHFPV 174
             E+A   L  + G + +
Sbjct: 82  TPEKAIELLGTMQGGYNI 99


>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase
           {Klebsiella pneumoniae [TaxId: 573]}
          Length = 179

 Score = 27.6 bits (60), Expect = 0.83
 Identities = 8/58 (13%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 114 DEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQLSMLYGH 171
           D+ I Q+  ++  A  P+ +     A +   + A+   +   +    +  Q +     
Sbjct: 7   DDAIDQVAKLIAQAKNPIFL-LGLMASQPENSKALRRLLETSHIPVTSTYQAAGAVNQ 63


>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase
           {Streptomyces clavuligerus [TaxId: 1901]}
          Length = 177

 Score = 27.3 bits (59), Expect = 1.2
 Identities = 9/59 (15%), Positives = 18/59 (30%), Gaps = 1/59 (1%)

Query: 113 NDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYLYIVAHYPKEEAHRQLSMLYGH 171
             +   Q  ++L  A  P+L+   + A R+G   A+                   +   
Sbjct: 5   WQKAADQAAALLAEAKHPVLV-VGAAAIRSGAVPAIRALAERLNIPVITTYIAKGVLPV 62


>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten
           (Pten tumor suppressor), N-terminal domain {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 174

 Score = 26.9 bits (59), Expect = 1.2
 Identities = 18/81 (22%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 94  ANDLGIQLINFPLSATRELNDEQIKQLISILKTAPK-----PLLIHCKSGADRTGLASAV 148
                 ++  +P         E IK     L             IHCK+G  RTG+    
Sbjct: 65  TAKFNCRVAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICA 124

Query: 149 YLYIVAHYPK-EEAHRQLSML 168
           YL     + K +EA      +
Sbjct: 125 YLLHRGKFLKAQEALDFYGEV 145


>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic
           subunit {Thale cress (Arabidopsis thaliana), chloroplast
           [TaxId: 3702]}
          Length = 179

 Score = 26.9 bits (58), Expect = 1.3
 Identities = 5/21 (23%), Positives = 13/21 (61%)

Query: 113 NDEQIKQLISILKTAPKPLLI 133
            D  ++Q++ ++  + KP+L 
Sbjct: 5   EDSHLEQIVRLISESKKPVLY 25


>d1vq2a_ c.97.1.2 (A:) Deoxycytidylate deaminase {Bacteriophage T4
           [TaxId: 10665]}
          Length = 193

 Score = 26.0 bits (56), Expect = 2.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)

Query: 98  GIQLINFPLSATRELNDEQIKQLI 121
           GI++ N P     +LN E I +  
Sbjct: 168 GIEVFNVPKKNLNKLNWENINEFC 191


>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus
           plantarum [TaxId: 1590]}
          Length = 183

 Score = 25.8 bits (55), Expect = 2.9
 Identities = 6/23 (26%), Positives = 12/23 (52%)

Query: 111 ELNDEQIKQLISILKTAPKPLLI 133
           E + + + +L   L  A +PL+ 
Sbjct: 14  EPDVQAVTRLTQTLLAAERPLIY 36


>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter
           formigenes [TaxId: 847]}
          Length = 175

 Score = 25.7 bits (55), Expect = 3.3
 Identities = 4/21 (19%), Positives = 13/21 (61%)

Query: 113 NDEQIKQLISILKTAPKPLLI 133
            ++ I +   ++K A +P+++
Sbjct: 5   AEDAIARAADLIKNAKRPVIM 25


>d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic
           domain {Yersinia enterocolitica [TaxId: 630]}
          Length = 283

 Score = 25.5 bits (55), Expect = 3.7
 Identities = 7/38 (18%), Positives = 14/38 (36%)

Query: 113 NDEQIKQLISILKTAPKPLLIHCKSGADRTGLASAVYL 150
           N  + K   ++   +    +IH ++G  RT        
Sbjct: 196 NMYESKGSSAVADDSKLRPVIHSRAGVGRTAQLIGAMC 233


>d1jr2a_ c.113.1.1 (A:) Uroporphyrinogen III synthase (U3S, HemD)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 260

 Score = 25.3 bits (54), Expect = 4.2
 Identities = 7/55 (12%), Positives = 19/55 (34%)

Query: 72  IKSILNLRGKLPESWHKEEEKAANDLGIQLINFPLSATRELNDEQIKQLISILKT 126
           +K +L    K  +       +     G++    P+ +   L+     + +S  + 
Sbjct: 1   MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPED 55


>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans
           [TaxId: 1377]}
          Length = 177

 Score = 25.0 bits (53), Expect = 4.4
 Identities = 3/21 (14%), Positives = 10/21 (47%)

Query: 113 NDEQIKQLISILKTAPKPLLI 133
             + I   + +L  + +P++ 
Sbjct: 7   AAQDIDAAVELLNNSKRPVIY 27


>d3e11a1 d.92.1.17 (A:1-113) Uncharacterized protein Acel_2062
           {Acidothermus cellulolyticus [TaxId: 28049]}
          Length = 113

 Score = 25.0 bits (55), Expect = 4.4
 Identities = 3/28 (10%), Positives = 12/28 (42%)

Query: 129 KPLLIHCKSGADRTGLASAVYLYIVAHY 156
             +   C++ ++         ++ +AH+
Sbjct: 73  NTICALCETESEVIDEVRKTVVHEIAHH 100


>d2j9ua1 a.24.28.1 (A:148-241) Vacuolar protein sorting-associated
           protein 28, VPS28 {Baker's yeast (Saccharomyces
           cerevisiae) [TaxId: 4932]}
          Length = 94

 Score = 25.1 bits (55), Expect = 4.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 106 LSATRELNDEQIKQLISILKTA 127
           LS    L + QI++L+  L+ A
Sbjct: 65  LSIGDTLTETQIRELLFDLELA 86


>d1e29a_ a.3.1.1 (A:) Photosystem II associated cytochrome c549
           {Synechocystis sp., pcc 6803 [TaxId: 1143]}
          Length = 135

 Score = 24.8 bits (53), Expect = 6.2
 Identities = 6/44 (13%), Positives = 12/44 (27%)

Query: 86  WHKEEEKAANDLGIQLINFPLSATRELNDEQIKQLISILKTAPK 129
            +  E+  +               R   ++ I  +      APK
Sbjct: 81  SYDGEDDYSELHPNISRPDIYPEMRNYTEDDIFDVAGYTLIAPK 124


>d1l7va_ f.22.1.1 (A:) ABC transporter involved in vitamin B12
          uptake, BtuC {Escherichia coli [TaxId: 562]}
          Length = 324

 Score = 24.3 bits (52), Expect = 7.5
 Identities = 4/52 (7%), Positives = 23/52 (44%)

Query: 1  MIKIKKPRKNLLIFYIKILLGVLVLCAVSLGLYFLTITTFTQNFHAVVPHEI 52
          + + ++ +    +  + +L+ + +L ++  G  +++   +      +   +I
Sbjct: 4  LARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISPGDWFTPRGELFVWQI 55


>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase
           complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus
           [TaxId: 2234]}
          Length = 158

 Score = 24.2 bits (52), Expect = 7.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)

Query: 114 DEQIKQLISILKTAPKPLLI 133
            E+ K + +++K A +PLLI
Sbjct: 6   LEKGKPVANMIKKAKRPLLI 25


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.138    0.399 

Gapped
Lambda     K      H
   0.267   0.0708    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 750,251
Number of extensions: 33060
Number of successful extensions: 153
Number of sequences better than 10.0: 1
Number of HSP's gapped: 150
Number of HSP's successfully gapped: 31
Length of query: 207
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 126
Effective length of database: 1,295,466
Effective search space: 163228716
Effective search space used: 163228716
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (23.5 bits)