HHsearch alignment for GI: 254780899 and conserved domain: cd01089
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=0 Score=337.53 Aligned_cols=216 Identities=18% Similarity=0.297 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCC----CC
Q ss_conf 999999999999999999997579988999999999999985983---03443324445532344642111212----22
Q gi|254780899|r 20 LENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAI---PATLNYRGYKKSCCTSINHVICHGIP----SN 92 (273)
Q Consensus 20 I~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~---~~~~~~~~f~~~~~~s~N~~~~H~~p----~d 92 (273)
T Consensus 1 IeKmR~Ag~i~a~~l~~~~~~i~pG~tt~eld~~~~~~i~~~~~~~~~~~~~~~~G~~~p~CiSvNe~v~HGiP~~~~~~ 80 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDAT 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCCCC
T ss_conf 97899999999999999995786999699999999999998304325676666677786727502544456899988887
Q ss_pred CCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCC-----CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf 200134057997876653000231112333444432-----103677877654322110011212210489999999862
Q gi|254780899|r 93 KQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRA-----AERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSE 167 (273)
Q Consensus 93 ~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~-----~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~ 167 (273)
T Consensus 81 ~~L~~GDiV~iD~g~~~dGy~~D~a~T~~VG~~~~~~~~~~~~~L~~~t~~al~~gI~~~~pG~~~~dI~~ai~~~~~~~ 160 (228)
T cd01089 81 YTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDY 160 (228)
T ss_pred CCCCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
T ss_conf 35468998999776886877987569999489671023379999999999999999997079989689999999999984
Q ss_pred CCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCEEEEEEEEE
Q ss_conf 96010475212332211354036531564545664511673788311144377762564688668833787167844218
Q gi|254780899|r 168 RYSVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQYEHTI 247 (273)
Q Consensus 168 g~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~~~~~Ed~v 247 (273)
T Consensus 161 g~~~v~~~~gH~~~~~~~~~~~~~~-------~~e~~~~~~~~~~~~~-----------------~~~dg~~~A~fEhTv 216 (228)
T cd01089 161 GCTPVEGVLSHQLKRVVSSGEGKAK-------LVECVKHGLLFPYPVL-----------------YEKEGEVVAQFKLTV 216 (228)
T ss_pred CCEEEECCCCCCCCCCCCCCCCCCC-------CCCCCCCCEEEEEEEE-----------------ECCCCCEEEEEEEEE
T ss_conf 9967745205699981777999888-------5413546718888789-----------------857998887833799
Q ss_pred EECCCCCEECCC
Q ss_conf 984798576526
Q gi|254780899|r 248 GITKAGCEIFTL 259 (273)
Q Consensus 248 lVT~~G~E~LT~ 259 (273)
T Consensus 217 lVT~~G~eILTg 228 (228)
T cd01089 217 LLTPNGVTVLTG 228 (228)
T ss_pred EECCCCCEECCC
T ss_conf 997998877389