HHsearch alignment for GI: 254780899 and conserved domain: cd01089

>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00  E-value=0  Score=337.53  Aligned_cols=216  Identities=18%  Similarity=0.297  Sum_probs=193.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCC----CC
Q ss_conf             999999999999999999997579988999999999999985983---03443324445532344642111212----22
Q gi|254780899|r   20 LENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAI---PATLNYRGYKKSCCTSINHVICHGIP----SN   92 (273)
Q Consensus        20 I~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~---~~~~~~~~f~~~~~~s~N~~~~H~~p----~d   92 (273)
T Consensus         1 IeKmR~Ag~i~a~~l~~~~~~i~pG~tt~eld~~~~~~i~~~~~~~~~~~~~~~~G~~~p~CiSvNe~v~HGiP~~~~~~   80 (228)
T cd01089           1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDAT   80 (228)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCEEECCCCCCCCCC
T ss_conf             97899999999999999995786999699999999999998304325676666677786727502544456899988887


Q ss_pred             CCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCC-----CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
Q ss_conf             200134057997876653000231112333444432-----103677877654322110011212210489999999862
Q gi|254780899|r   93 KQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRA-----AERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSE  167 (273)
Q Consensus        93 ~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~-----~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~  167 (273)
T Consensus        81 ~~L~~GDiV~iD~g~~~dGy~~D~a~T~~VG~~~~~~~~~~~~~L~~~t~~al~~gI~~~~pG~~~~dI~~ai~~~~~~~  160 (228)
T cd01089          81 YTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDY  160 (228)
T ss_pred             CCCCCCCEEEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
T ss_conf             35468998999776886877987569999489671023379999999999999999997079989689999999999984


Q ss_pred             CCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCEEEEEEEEE
Q ss_conf             96010475212332211354036531564545664511673788311144377762564688668833787167844218
Q gi|254780899|r  168 RYSVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQYEHTI  247 (273)
Q Consensus       168 g~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~~~~~Ed~v  247 (273)
T Consensus       161 g~~~v~~~~gH~~~~~~~~~~~~~~-------~~e~~~~~~~~~~~~~-----------------~~~dg~~~A~fEhTv  216 (228)
T cd01089         161 GCTPVEGVLSHQLKRVVSSGEGKAK-------LVECVKHGLLFPYPVL-----------------YEKEGEVVAQFKLTV  216 (228)
T ss_pred             CCEEEECCCCCCCCCCCCCCCCCCC-------CCCCCCCCEEEEEEEE-----------------ECCCCCEEEEEEEEE
T ss_conf             9967745205699981777999888-------5413546718888789-----------------857998887833799


Q ss_pred             EECCCCCEECCC
Q ss_conf             984798576526
Q gi|254780899|r  248 GITKAGCEIFTL  259 (273)
Q Consensus       248 lVT~~G~E~LT~  259 (273)
T Consensus       217 lVT~~G~eILTg  228 (228)
T cd01089         217 LLTPNGVTVLTG  228 (228)
T ss_pred             EECCCCCEECCC
T ss_conf             997998877389