HHsearch results for GI: 254780899 and protein with PDBid: 1o0x_A
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=0 Score=405.57 Aligned_cols=253 Identities=36% Similarity=0.569 Sum_probs=234.7
Q ss_pred HHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33139788539999999999999999999999997579988999999999999985983034433244455323446421
Q gi|254780899|r 6 SRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVI 85 (273)
Q Consensus 6 ~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~ 85 (273)
.+.-..|+||||+||++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+.+.+.++.+++.+++.+.++..
T Consensus 8 ~~~~~m~~VKs~~EI~~~R~A~~ia~~~~~~~~~~i~pG~te~ev~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 87 (262)
T 1o0x_A 8 HHHHHMIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEV 87 (262)
T ss_dssp -----CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 25543056298999999999999999999999987768997999999999999982885323676777765685367553
Q ss_pred CCC-CCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 112-1222200134057997876653000231112333444432103677877654322110011212210489999999
Q gi|254780899|r 86 CHG-IPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYA 164 (273)
Q Consensus 86 ~H~-~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~ 164 (273)
.|+ .++++.+++||++++|+++.|+||++|++||+++|+++++++++|++++++++++++++|||++++||++++++++
T Consensus 88 ~~~~~~~~~~~~~gd~v~id~g~~~~gy~~d~tRT~~~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~ 167 (262)
T 1o0x_A 88 VHGLPLKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETV 167 (262)
T ss_dssp SCCCCCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEEEEECEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 33235775010169833898222247772666542030787889999999999999999987479989999999999999
Q ss_pred HHCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCEEEEEE
Q ss_conf 86296010475212332211354036531564545664511673788311144377762564688668833787167844
Q gi|254780899|r 165 HSERYSVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQYE 244 (273)
Q Consensus 165 ~~~g~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~~~~~E 244 (273)
++.||+.+++++|||+|+.+||+|.++++.. .+++.+|++||||+|||++|.+..++..++|+|++++.+|.+++|+|
T Consensus 168 ~~~g~~~~~~~~GHgiGl~~he~p~~~~~~~--~~~~~~le~Gmv~tvEp~~~~~~~~~~~~~d~~~~~~~~g~~g~~iE 245 (262)
T 1o0x_A 168 ESVGFNVIRDYVGHGVGRELHEDPQIPNYGT--PGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFE 245 (262)
T ss_dssp HHTTCEECCSSCEEECSSSSSEEEEECSCCC--TTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETTCCCEEECB
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCEEEECCEEECCCCCEEECCCCCEEEECCCCCEEEEC
T ss_conf 9829997868740735781678864356567--99987865896899777354178733772688779822895177755
Q ss_pred EEEEECCCCCEECCCC
Q ss_conf 2189847985765267
Q gi|254780899|r 245 HTIGITKAGCEIFTLS 260 (273)
Q Consensus 245 d~vlVT~~G~E~LT~~ 260 (273)
|||+||+||+|+||+.
T Consensus 246 d~vlVTe~G~E~LT~~ 261 (262)
T 1o0x_A 246 HTILITENGAEILTKE 261 (262)
T ss_dssp EEEEECSSSEEESSCC
T ss_pred EEEEECCCCCEECCCC
T ss_conf 0999959968565999