HHsearch results for GI: 254780899 and protein with PDBid: 3biq_A
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, activator, chromosomal protein, coiled coil, DNA damage; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=0 Score=368.53 Aligned_cols=250 Identities=13% Similarity=0.078 Sum_probs=208.2
Q ss_pred CCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC------CCHHHHHHHHHHHHHHCCC------------
Q ss_conf 7720331397885399999999999999999999999975799------8899999999999998598------------
Q gi|254780899|r 2 LSSSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPG------TTTEEIDDFVLKFGMENNA------------ 63 (273)
Q Consensus 2 ~~~~~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G------~se~el~~~~~~~~~~~g~------------ 63 (273)
+|........|.|||++||++||+|+++++.+|+++.+.+++| +++.++.+.++..+...+.
T Consensus 165 vd~~~~l~~lR~vKs~~Ei~~ir~A~~i~~~~~~~~~~~i~~gi~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~ 244 (467)
T 3biq_A 165 IDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKLSDKIENKIDDVKFLKQLSPDLSALC 244 (467)
T ss_dssp EECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTS
T ss_pred EECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
T ss_conf 87589999999629999999999999999999999998765554355664699999999999986323320230110023
Q ss_pred -----CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf -----3034433244455323446421-1121222200134057997876653000231112333444432103677877
Q gi|254780899|r 64 -----IPATLNYRGYKKSCCTSINHVI-CHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTY 137 (273)
Q Consensus 64 -----~~~~~~~~~f~~~~~~s~N~~~-~H~~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~ 137 (273)
.........|++++++|.|.++ +|+.|++++|++||+|++|+|+.|+||++|++|||++ +++++++++|++++
T Consensus 245 ~~~~~~~~~~~~~~y~~IvasG~n~~~~~h~~~~~~~l~~gd~vlvD~G~~y~gY~sDitRT~~v-~~~~~~~~~y~~v~ 323 (467)
T 3biq_A 245 PPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTNDQLYGNGCILASCGIRYNNYCSNITRTFLI-DPSEEMANNYDFLL 323 (467)
T ss_dssp CTTCCCCGGGEEESSCCEEECTTCCCCSTTCCCCSSBCCCSEEEEEEECEEETTEECCEEEEEEE-SCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCCCCCCEEEEEE-ECCHHHHHHHHHHH
T ss_conf 43222367877766575115677656567768998632459989998355999561574379985-07589999999999
Q ss_pred HHHHHHH-HCCCCCCCCCHHHHHHHHHHHHCCCE---ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEEC
Q ss_conf 6543221-10011212210489999999862960---1047521233221135403653156454566451167378831
Q gi|254780899|r 138 ESLYKGI-AAVKLNANIEDIGKAIQRYAHSERYS---VVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIE 213 (273)
Q Consensus 138 ~a~~~~i-~~ikpG~~~~ei~~a~~~~~~~~g~~---~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiE 213 (273)
+++++++ +++|||+++++|+.++++++.++|+. .+.|++||||||++||.|.+.+ ..++..+|++||||+||
T Consensus 324 ~~~~~~~~~~~kpG~~~~~v~~~~~~~i~~~g~~~~~~f~h~~GHgiGl~~hE~p~~~~----~~~~~~~L~~GMv~tie 399 (467)
T 3biq_A 324 TLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIGLEFRDSNFILN----VKNDYRKIQRGDCFNIS 399 (467)
T ss_dssp HHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCCGGGBSS----TTCCSCCCCTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCEECCCCEEEEC
T ss_conf 99999999997639959999999999999729454432999987825786679998668----89998887999999983
Q ss_pred CEEECCCCCCEECCCCCEEEECCCCEEEEEEEEEEECCCC---CEECCCCCCCCCCC
Q ss_conf 1144377762564688668833787167844218984798---57652679886768
Q gi|254780899|r 214 PMLNVGGSSAKVLSDGWTAVTRDRSLSAQYEHTIGITKAG---CEIFTLSPNNLGQP 267 (273)
Q Consensus 214 P~i~~~~~~~~~~~d~w~~~~~~g~~~~~~Ed~vlVT~~G---~E~LT~~p~~l~~~ 267 (273)
||+|....+ ...+.+|+|+||||+||++| +++||..|++++++
T Consensus 400 pGiy~~~~~-----------~~~~~~girieD~vlvt~~g~~~~~llt~~pk~~~~I 445 (467)
T 3biq_A 400 FGFNNLKDS-----------QSANNYALQLADTVQIPLDETEPPRFLTNYTKAKSQI 445 (467)
T ss_dssp EEEEEECCS-----------SCSSCEEEEEEEEEECCSSTTSCCEESCCSCCCHHHH
T ss_pred CEECCCCCC-----------CCCCCEEEEECCEEEEECCCCCCCEECCCCCCCHHHH
T ss_conf 855668888-----------7668628995127999429985616886799539997