Query gi|254780899|ref|YP_003065312.1| methionine aminopeptidase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 273
No_of_seqs 139 out of 5592
Neff 7.7
Searched_HMMs 23785
Date Tue May 31 22:38:30 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780899.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mx6_A Methionine aminopeptida 100.0 0 0 455.8 23.3 258 9-268 3-261 (262)
2 2b3h_A Methionine aminopeptida 100.0 0 0 452.6 24.6 253 7-261 68-320 (329)
3 2gg2_A Methionine aminopeptida 100.0 0 0 429.2 22.1 258 11-270 1-260 (263)
4 1qxy_A Methionyl aminopeptidas 100.0 0 0 413.7 22.3 251 12-263 1-252 (252)
5 3iu7_A Methionine aminopeptida 100.0 0 0 410.3 24.0 256 3-260 33-288 (288)
6 1o0x_A Methionine aminopeptida 100.0 0 0 405.6 21.6 253 6-260 8-261 (262)
7 2v3z_A XAA-Pro aminopeptidase; 100.0 0 0 393.6 15.7 246 2-266 163-429 (440)
8 2zsg_A Aminopeptidase P, putat 100.0 0 0 385.7 17.4 236 2-265 121-357 (359)
9 1kp0_A Creatine amidinohydrola 100.0 0 0 386.7 15.8 254 2-269 145-400 (402)
10 2iw2_A XAA-Pro dipeptidase; me 100.0 0 0 391.9 11.6 256 7-266 180-475 (494)
11 1wn1_A Dipeptidase; prolidase, 100.0 0 0 385.5 16.0 234 2-264 119-353 (356)
12 1wy2_A XAA-Pro dipeptidase; st 100.0 0 0 382.2 18.0 236 2-265 115-351 (351)
13 3l24_A XAA-Pro dipeptidase; PI 100.0 0 0 386.8 12.5 253 7-266 152-443 (517)
14 1chm_A Creatine amidinohydrola 100.0 0 0 383.1 14.6 254 2-269 145-400 (401)
15 2q8k_A Proliferation-associate 100.0 0 0 373.6 20.7 262 4-265 9-348 (401)
16 3ig4_A XAA-Pro aminopeptidase; 100.0 0 0 368.0 15.1 237 3-266 160-407 (427)
17 3biq_A FACT complex subunit SP 100.0 0 0 368.5 13.6 250 2-267 165-445 (467)
18 3cb6_A FACT complex subunit SP 100.0 0 0 363.6 12.3 253 2-267 165-437 (444)
19 1xgs_A Methionine aminopeptida 100.0 0 0 348.0 21.1 228 19-259 2-295 (295)
20 2nw5_A Methionine aminopeptida 100.0 0 0 340.8 20.3 244 9-261 36-358 (360)
21 1b6a_A Methionine aminopeptida 100.0 0 0 338.8 19.3 245 9-261 155-476 (478)
22 3ctz_A XAA-Pro aminopeptidase 100.0 0 0 337.4 13.4 238 8-270 315-575 (623)
23 2nw5_A Methionine aminopeptida 97.2 0.0021 8.7E-08 41.6 8.2 82 28-109 159-250 (360)
24 2q8k_A Proliferation-associate 96.7 0.0038 1.6E-07 39.8 6.6 81 22-109 145-239 (401)
25 1b6a_A Methionine aminopeptida 96.7 0.0021 8.8E-08 41.6 4.9 89 129-220 169-258 (478)
26 2b3h_A Methionine aminopeptida 96.5 0.0064 2.7E-07 38.3 6.5 86 129-220 84-172 (329)
27 1xgs_A Methionine aminopeptida 96.4 0.0095 4E-07 37.2 6.9 85 28-115 109-199 (295)
28 1wn1_A Dipeptidase; prolidase, 96.2 0.039 1.6E-06 33.1 9.0 80 130-218 141-220 (356)
29 1kp0_A Creatine amidinohydrola 96.2 0.046 1.9E-06 32.6 9.3 85 130-218 167-253 (402)
30 2zsg_A Aminopeptidase P, putat 96.1 0.049 2E-06 32.4 9.4 82 130-219 143-224 (359)
31 1wy2_A XAA-Pro dipeptidase; st 95.8 0.078 3.3E-06 31.1 9.3 82 130-219 137-218 (351)
32 3cb6_A FACT complex subunit SP 95.7 0.12 5.1E-06 29.8 10.3 20 199-218 270-289 (444)
33 1chm_A Creatine amidinohydrola 95.6 0.13 5.3E-06 29.7 9.7 78 131-218 168-253 (401)
34 3ig4_A XAA-Pro aminopeptidase; 95.6 0.062 2.6E-06 31.7 7.9 81 131-219 182-262 (427)
35 3mx6_A Methionine aminopeptida 95.5 0.045 1.9E-06 32.7 7.0 83 24-110 124-211 (262)
36 2gg2_A Methionine aminopeptida 95.0 0.079 3.3E-06 31.0 7.0 82 24-109 122-208 (263)
37 1o0x_A Methionine aminopeptida 94.8 0.2 8.2E-06 28.4 8.7 39 25-63 134-172 (262)
38 3biq_A FACT complex subunit SP 94.7 0.24 1E-05 27.8 10.0 89 131-219 188-297 (467)
39 2v3z_A XAA-Pro aminopeptidase; 94.5 0.25 1E-05 27.7 8.5 80 130-219 185-266 (440)
40 3iu7_A Methionine aminopeptida 94.4 0.28 1.2E-05 27.3 9.1 86 129-219 53-140 (288)
41 1qxy_A Methionyl aminopeptidas 93.1 0.42 1.8E-05 26.2 7.6 39 25-63 121-159 (252)
42 2iw2_A XAA-Pro dipeptidase; me 91.5 0.29 1.2E-05 27.2 5.2 84 130-219 197-283 (494)
43 1hxv_A Trigger factor; FKBP fo 51.9 6.8 0.00028 18.1 2.2 23 91-113 26-48 (113)
44 1iwp_G Glycerol dehydratase ga 35.1 20 0.00084 15.0 3.9 43 21-63 71-117 (141)
45 1eex_G Propanediol dehydratase 33.7 21 0.00089 14.8 5.0 25 145-169 124-149 (173)
46 2fk5_A Fuculose-1-phosphate al 33.3 10 0.00042 17.0 0.7 13 93-105 47-59 (200)
47 1e4c_P L-fuculose 1-phosphate 31.4 15 0.00062 15.9 1.3 15 93-107 48-62 (215)
48 3kmh_A D-lyxose isomerase; cup 26.2 28 0.0012 14.0 2.0 20 198-217 170-189 (246)
No 1
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=0 Score=455.80 Aligned_cols=258 Identities=51% Similarity=0.870 Sum_probs=243.5
Q ss_pred CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 39788539999999999999999999999997579988999999999999985983034433244455323446421112
Q gi|254780899|r 9 SGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVICHG 88 (273)
Q Consensus 9 ~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~~H~ 88 (273)
.+.|+||||+||++||+|++|++++++++.+.++||+||.||++.+++++.++|+...+..+.+|+.+++++.|...+|+
T Consensus 3 ~~m~~IKs~~EI~~mR~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~h~ 82 (262)
T 3mx6_A 3 GSMIKIHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHG 82 (262)
T ss_dssp ---CCCCCHHHHHHHHHHHHHHHHHHHHHGGGCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEECC
T ss_pred CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87227789999999999999999999999987769997999999999999986986467666567643205676504589
Q ss_pred CCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 12222001340579978766530002311123334444321036778776543221100112122104899999998629
Q gi|254780899|r 89 IPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSER 168 (273)
Q Consensus 89 ~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g 168 (273)
.|+|+++++||+|++|+|+.|+||++|++|||++|+++++++++|+++++|++++++++|||++++||+++++++++++|
T Consensus 83 ~~~d~~l~~Gd~v~iD~g~~~~gY~aD~tRT~~vg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~g 162 (262)
T 3mx6_A 83 IPNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHN 162 (262)
T ss_dssp CCCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCEEEEEEEEEECCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 89983658999899988999999992212136647999899999999999999999971398999999999999999868
Q ss_pred CEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEE-CCCCCEEEECCCCEEEEEEEEE
Q ss_conf 601047521233221135403653156454566451167378831114437776256-4688668833787167844218
Q gi|254780899|r 169 YSVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKV-LSDGWTAVTRDRSLSAQYEHTI 247 (273)
Q Consensus 169 ~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~-~~d~w~~~~~~g~~~~~~Ed~v 247 (273)
|+.+++++|||||+.+||.|.+++... .+++.+|++||||+|||++|.+..+.+. ..|+|++.++||++|+|+||||
T Consensus 163 ~~~~~~~~GHgiGl~~he~P~i~~~~~--~~~~~~L~~GmV~~iEp~~~~~~~~~~~~~~d~w~~~~~~g~~g~riEd~v 240 (262)
T 3mx6_A 163 YSVVRDYTGHGIGRVFHDKPSILNYGR--NGTGLTLKEGMFFTVEPMINAGNYDTILSKLDGWTVTTRDKSLSAQFEHTI 240 (262)
T ss_dssp CEECCSCCEEECSSSSSEEEEECSSCC--TTCSCBCCTTCEEEECCEEESSCSCEEECTTTSCCEEETTCCCEEECBEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCCEEEEECCCCEEEEEEEE
T ss_conf 942899862878886068986577776--899978348978998634761777604533789668852687488973099
Q ss_pred EECCCCCEECCCCCCCCCCCC
Q ss_conf 984798576526798867688
Q gi|254780899|r 248 GITKAGCEIFTLSPNNLGQPG 268 (273)
Q Consensus 248 lVT~~G~E~LT~~p~~l~~~~ 268 (273)
+||++|+|+||.+|++|+.|+
T Consensus 241 ~VTe~G~E~LT~~p~~L~~~~ 261 (262)
T 3mx6_A 241 GVTKDGFEIFTLSPKKLDYPP 261 (262)
T ss_dssp EECSSSEEESCCCTTCCCSSC
T ss_pred EECCCCCEECCCCCCCCCCCC
T ss_conf 996993778989976457998
No 2
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitabread fold; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=0 Score=452.59 Aligned_cols=253 Identities=45% Similarity=0.801 Sum_probs=241.7
Q ss_pred HHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 31397885399999999999999999999999975799889999999999999859830344332444553234464211
Q gi|254780899|r 7 RESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVIC 86 (273)
Q Consensus 7 ~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~~ 86 (273)
+....+.|||++||++||+||+|++++++++.+.++||+||.||+..+++++.++|+++++.+|.+||.++|+|.|..+|
T Consensus 68 ~~~~~~~IKs~~EI~~mR~A~~ia~~al~~a~~~ikpGvte~Ei~~~~~~~~~~~ga~~s~~~y~~fp~s~~~s~n~~~~ 147 (329)
T 2b3h_A 68 KGTSQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVIC 147 (329)
T ss_dssp TTCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEETTEEE
T ss_pred CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEECCCCEEEC
T ss_conf 57787378899999999999999999999999878589979999999999999866973565666778644678871631
Q ss_pred CCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 12122220013405799787665300023111233344443210367787765432211001121221048999999986
Q gi|254780899|r 87 HGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHS 166 (273)
Q Consensus 87 H~~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~ 166 (273)
|+.|++++|++||+|++|+++.|+||++|++|||++|++++++++++++++++++++++++|||++++||++++++++++
T Consensus 148 h~~p~~r~l~~GDiv~iD~~~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ai~~~~~~ 227 (329)
T 2b3h_A 148 HGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQA 227 (329)
T ss_dssp CCCCCSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTCBTTHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEEEECCEEECCEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 78998745468988998434512999641241567678899999999999999999999726998899999999999998
Q ss_pred CCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCEEEEEEEE
Q ss_conf 29601047521233221135403653156454566451167378831114437776256468866883378716784421
Q gi|254780899|r 167 ERYSVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQYEHT 246 (273)
Q Consensus 167 ~g~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~~~~~Ed~ 246 (273)
+||+.+++++||++|..+|+.|.+.++..+ +...+|++||||||||+||.+..+..+|+|+||++|+||.+|+|||||
T Consensus 228 ~G~~~~~~~~ghgiG~~~~~~~~~~~~~~~--~~~~~Le~GMVftIEP~i~~~~~~~~~~~d~wt~~t~dg~~gar~Edt 305 (329)
T 2b3h_A 228 NGFSVVRSYCGHGIHKLFHTAPNVPHYAKN--KAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHT 305 (329)
T ss_dssp TTCEECCSCCEEECSSSSSEEEEECCSSSC--CCCCBCCTTCEEEECCEEESSCCCEEECTTSCCEEETTCCCEEECBEE
T ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCC--CCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEEECCCCEEEECCE
T ss_conf 699542042465776743468743665544--678884698089989951038875144378865997379767996529
Q ss_pred EEECCCCCEECCCCC
Q ss_conf 898479857652679
Q gi|254780899|r 247 IGITKAGCEIFTLSP 261 (273)
Q Consensus 247 vlVT~~G~E~LT~~p 261 (273)
|+||++|+|+||+..
T Consensus 306 vlVTe~G~EvLT~r~ 320 (329)
T 2b3h_A 306 LLVTDTGCEILTRRL 320 (329)
T ss_dssp EEECSSSEEETTCCS
T ss_pred EEECCCCCEECCCCC
T ss_conf 999799577778999
No 3
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=0 Score=429.25 Aligned_cols=258 Identities=47% Similarity=0.836 Sum_probs=237.2
Q ss_pred CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 78853999999999999999999999999757998899999999999998598-30344332444553234464211121
Q gi|254780899|r 11 SINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNA-IPATLNYRGYKKSCCTSINHVICHGI 89 (273)
Q Consensus 11 ~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~-~~~~~~~~~f~~~~~~s~N~~~~H~~ 89 (273)
+|+||||+||++||+|+++++++++++.+.++||+||.||++.+++.+.+.++ ......+.+||.++++|.|+.++|+.
T Consensus 1 a~~IKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~ 80 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGI 80 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSTTCBHHHHHHHHHHHHHHTSCCEESSTTGGGCCSSSEEEETTEEECCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEECCC
T ss_conf 96368999999999999999999999998774899899999999999998568654565666889636655753406665
Q ss_pred CCC-CCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf 222-2001340579978766530002311123334444321036778776543221100112122104899999998629
Q gi|254780899|r 90 PSN-KQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSER 168 (273)
Q Consensus 90 p~d-~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g 168 (273)
|++ ++|++||+|++|+|+.|+||++|++|||++|++++++++++++++++++++++++|||++++||+++++++++++|
T Consensus 81 ~~~~~~l~~Gd~v~~D~g~~~~GY~~d~~Rt~~~G~~~~~~~~~~~~~~~a~~~~~~~ikpG~~~~dv~~a~~~~~~~~g 160 (263)
T 2gg2_A 81 PDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEG 160 (263)
T ss_dssp CCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCEEEEEEEEEECCEEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
T ss_conf 79983668999899997888999996500101117742111144589999999999884389918999999999999849
Q ss_pred CEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCEEEEEEEEEE
Q ss_conf 60104752123322113540365315645456645116737883111443777625646886688337871678442189
Q gi|254780899|r 169 YSVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQYEHTIG 248 (273)
Q Consensus 169 ~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~~~~~Ed~vl 248 (273)
|..+++++|||+|+.+||+|.+++.++ ...+.+|++||||+|||++|++..+++.++|+|+++++++.+|+|+||||+
T Consensus 161 ~~~~~~~~GHgiG~~~he~p~~~~~~~--~~~~~~L~~gmv~~iEp~~~~~~~~~~~~~d~~~v~~~~~~~g~~~Ed~v~ 238 (263)
T 2gg2_A 161 FSVVREYCGHGIGRGFHEEPQVLHYDS--RETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIV 238 (263)
T ss_dssp CEECSSCCEEECSSSSSEEEEECSSCC--TTCCCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCEECCCCCEEEEECCEECCCCCEEECCCCCEEEEECCCCEEEECCEEE
T ss_conf 943677401687873358974354435--432013479988998484761777337727886588526862899632899
Q ss_pred ECCCCCEECCCCCCCCCCCCCC
Q ss_conf 8479857652679886768878
Q gi|254780899|r 249 ITKAGCEIFTLSPNNLGQPGIS 270 (273)
Q Consensus 249 VT~~G~E~LT~~p~~l~~~~~~ 270 (273)
||+||+|+||..|.++.+..++
T Consensus 239 VTe~G~e~LT~~~~~~~~~~~~ 260 (263)
T 2gg2_A 239 VTDNGCEILTLRKDDTIPAIIS 260 (263)
T ss_dssp EETTEEEESSCCTTCCSCSEEE
T ss_pred ECCCCCEECCCCCCCCCHHHHC
T ss_conf 9499677789989631378754
No 4
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=0 Score=413.67 Aligned_cols=251 Identities=31% Similarity=0.486 Sum_probs=234.8
Q ss_pred EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88539999999999999999999999997579988999999999999985983034433244455323446421112122
Q gi|254780899|r 12 INIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVICHGIPS 91 (273)
Q Consensus 12 ~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~~H~~p~ 91 (273)
|-|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++++.+++..+.+|+.++|+|.|++.+|+.|+
T Consensus 1 ~~IKs~~Ei~~~R~A~~i~~~a~~~~~~~i~pG~se~El~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 80 (252)
T 1qxy_A 1 MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPS 80 (252)
T ss_dssp CBCCSHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCEEHHHHHHCCSSSSEEEETTEEECCCCC
T ss_pred CEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 98288999999999999999999999986758996999999999999984773676677786865797543233579999
Q ss_pred CCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCE
Q ss_conf 220013405799787665300023111233344443-2103677877654322110011212210489999999862960
Q gi|254780899|r 92 NKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKR-AAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYS 170 (273)
Q Consensus 92 d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~-~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~ 170 (273)
+++|++||+|++|+++.|+||++|++|||++|++++ .+++++++++++++++++++|||+++++++++++.+..+.++.
T Consensus 81 ~~~i~~Gd~v~~d~g~~~~gY~~D~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~~v~~~~~~~~~~~~~~ 160 (252)
T 1qxy_A 81 KRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLK 160 (252)
T ss_dssp SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSCCSCTHHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHHHTTCE
T ss_pred CCCCCCCCEEEEECCEEECCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 74246899899862518998974005622358886202578999999999999987279984426899999999853875
Q ss_pred ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCEEEEEEEEEEEC
Q ss_conf 10475212332211354036531564545664511673788311144377762564688668833787167844218984
Q gi|254780899|r 171 VVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQYEHTIGIT 250 (273)
Q Consensus 171 ~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~~~~~Ed~vlVT 250 (273)
.+.+++||++|+..||.|.... .....+++.+|++||||+|||++|.++.++..++|+|++++.+|++|+|+||||+||
T Consensus 161 ~~~~~~Gh~~G~~~~~~p~~~~-~~~~~~~~~~le~GMV~~iEP~i~~~~~~~~~~~~~w~~~~~~g~~g~r~Ed~vlVT 239 (252)
T 1qxy_A 161 VIKNLTGHGVGLSLHEAPAHVL-NYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVT 239 (252)
T ss_dssp ECTTCCEEECSSSSSEEEEEEC-SSCCTTCCCBCCTTBEEEECCEEESSCSSCEECSSSSCEECTTCCCEEEEEEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCEEEEECCEEECCCCCEEECCCCCEEEEECCCEEEEEEEEEEEC
T ss_conf 1255557767774023763223-556666676588973999899564388641434888669850796388853099993
Q ss_pred CCCCEECCCCCCC
Q ss_conf 7985765267988
Q gi|254780899|r 251 KAGCEIFTLSPNN 263 (273)
Q Consensus 251 ~~G~E~LT~~p~~ 263 (273)
+||||+||++|++
T Consensus 240 e~G~e~LT~~~~e 252 (252)
T 1qxy_A 240 KDGPILTTKIEEE 252 (252)
T ss_dssp TTCCEETTCC---
T ss_pred CCCCEECCCCCCC
T ss_conf 9942879899999
No 5
>3iu7_A Methionine aminopeptidase; enzyme-inhibitor complex, cobalt, hydrolase, metal-binding, protease; HET: FCD; 1.40A {Mycobacterium tuberculosis} PDB: 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A
Probab=100.00 E-value=0 Score=410.30 Aligned_cols=256 Identities=40% Similarity=0.713 Sum_probs=240.2
Q ss_pred CCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 72033139788539999999999999999999999997579988999999999999985983034433244455323446
Q gi|254780899|r 3 SSSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSIN 82 (273)
Q Consensus 3 ~~~~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N 82 (273)
+.+.+....|.|||++||++||+|++|+++++.++.+.++||+||.||++.+.+++.+.|..+...+..+|+..++.+.|
T Consensus 33 ~~~~~~~~~r~IKs~~EI~~mR~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 112 (288)
T 3iu7_A 33 KPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLN 112 (288)
T ss_dssp SSSCSCSSSCSBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEET
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 89876566786699999999999999999999999987758999999999999999986996654565688752003453
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 42111212222001340579978766530002311123334444321036778776543221100112122104899999
Q gi|254780899|r 83 HVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQR 162 (273)
Q Consensus 83 ~~~~H~~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~ 162 (273)
.+.+|+.++++++++||+|++|+++.|+||++|++|||++|+++++++++|++++++++++++++|||+++++++.++++
T Consensus 113 ~~~~~~~~~~~~~~~Gd~v~vD~g~~~~GY~~D~~RT~~~g~~~~~~~~~~~~~~e~~~~~i~~~rPG~~~~dv~~a~~~ 192 (288)
T 3iu7_A 113 EVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIES 192 (288)
T ss_dssp TEEECCCCSSCBCCTTCEEEEEEEEEETTEEEEEEEEEECSSCCHHHHHHHHHHHHHHHHHHHTCCTTSBTHHHHHHHHH
T ss_pred EEECCCCCCCCCCCCCCEEEEEEEEEECCEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 26337899873425666799851158998984135304624644210058999999999999870599899998799999
Q ss_pred HHHHCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCEEEE
Q ss_conf 99862960104752123322113540365315645456645116737883111443777625646886688337871678
Q gi|254780899|r 163 YAHSERYSVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQ 242 (273)
Q Consensus 163 ~~~~~g~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~~~~ 242 (273)
+++++||..+++++|||+|+..|+.|....... ...+.+|++||||||||++|++..++++++|+|++++.||++|+|
T Consensus 193 ~~~~~g~~~~~~~~ghg~g~~~~~~p~~~~~~~--~~~~~~Le~GMV~tiEP~iy~~~~~~~~~~d~w~~~t~~g~~gvr 270 (288)
T 3iu7_A 193 YANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQ--PAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQ 270 (288)
T ss_dssp HHHHTTCEECSSSCEEBCSSSSSCSCEECSSCC--TTCCCBCCTTBEEEECCEEESSCSCEEECTTSCCEEETTCCCEEE
T ss_pred HHHHCCCCEEECEEECCCCCCCCCCCCCCCCCC--CCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEEECCCCEEE
T ss_conf 999849974203035168776555874343466--777877279968998996431887615526886378526975788
Q ss_pred EEEEEEECCCCCEECCCC
Q ss_conf 442189847985765267
Q gi|254780899|r 243 YEHTIGITKAGCEIFTLS 260 (273)
Q Consensus 243 ~Ed~vlVT~~G~E~LT~~ 260 (273)
+||||+||+||+|+||..
T Consensus 271 iEd~vlVTe~G~E~LT~l 288 (288)
T 3iu7_A 271 FEHTLLVTDTGVEILTCL 288 (288)
T ss_dssp CBEEEEECSSSEEESSCC
T ss_pred ECCEEEECCCCCEEECCC
T ss_conf 561899949937770779
No 6
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=0 Score=405.57 Aligned_cols=253 Identities=36% Similarity=0.569 Sum_probs=234.7
Q ss_pred HHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33139788539999999999999999999999997579988999999999999985983034433244455323446421
Q gi|254780899|r 6 SRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVI 85 (273)
Q Consensus 6 ~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~ 85 (273)
.+.-..|+||||+||++||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+.+.+.++.+++.+++.+.++..
T Consensus 8 ~~~~~m~~VKs~~EI~~~R~A~~ia~~~~~~~~~~i~pG~te~ev~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 87 (262)
T 1o0x_A 8 HHHHHMIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEV 87 (262)
T ss_dssp -----CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTTGGGCCCSEEEEETTBC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 25543056298999999999999999999999987768997999999999999982885323676777765685367553
Q ss_pred CCC-CCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 112-1222200134057997876653000231112333444432103677877654322110011212210489999999
Q gi|254780899|r 86 CHG-IPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYA 164 (273)
Q Consensus 86 ~H~-~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~ 164 (273)
.|+ .++++.+++||++++|+++.|+||++|++||+++|+++++++++|++++++++++++++|||++++||++++++++
T Consensus 88 ~~~~~~~~~~~~~gd~v~id~g~~~~gy~~d~tRT~~~G~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~ 167 (262)
T 1o0x_A 88 VHGLPLKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETV 167 (262)
T ss_dssp SCCCCCTTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEEEEECEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 33235775010169833898222247772666542030787889999999999999999987479989999999999999
Q ss_pred HHCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCEEEEEE
Q ss_conf 86296010475212332211354036531564545664511673788311144377762564688668833787167844
Q gi|254780899|r 165 HSERYSVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLSAQYE 244 (273)
Q Consensus 165 ~~~g~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~~~~~E 244 (273)
++.||+.+++++|||+|+.+||+|.++++.. .+++.+|++||||+|||++|.+..++..++|+|++++.+|.+++|+|
T Consensus 168 ~~~g~~~~~~~~GHgiGl~~he~p~~~~~~~--~~~~~~le~Gmv~tvEp~~~~~~~~~~~~~d~~~~~~~~g~~g~~iE 245 (262)
T 1o0x_A 168 ESVGFNVIRDYVGHGVGRELHEDPQIPNYGT--PGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFE 245 (262)
T ss_dssp HHTTCEECCSSCEEECSSSSSEEEEECSCCC--TTCSCBCCTTCEEEECCEEESSCCCEEECTTSSCEEETTCCCEEECB
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCEEEECCEEECCCCCEEECCCCCEEEECCCCCEEEEC
T ss_conf 9829997868740735781678864356567--99987865896899777354178733772688779822895177755
Q ss_pred EEEEECCCCCEECCCC
Q ss_conf 2189847985765267
Q gi|254780899|r 245 HTIGITKAGCEIFTLS 260 (273)
Q Consensus 245 d~vlVT~~G~E~LT~~ 260 (273)
|||+||+||+|+||+.
T Consensus 246 d~vlVTe~G~E~LT~~ 261 (262)
T 1o0x_A 246 HTILITENGAEILTKE 261 (262)
T ss_dssp EEEEECSSSEEESSCC
T ss_pred EEEEECCCCCEECCCC
T ss_conf 0999959968565999
No 7
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidase P, manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=100.00 E-value=0 Score=393.59 Aligned_cols=246 Identities=21% Similarity=0.265 Sum_probs=218.8
Q ss_pred CCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77203313978853999999999999999999999999757998899999999999998598303443324445532344
Q gi|254780899|r 2 LSSSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSI 81 (273)
Q Consensus 2 ~~~~~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~ 81 (273)
+|........|.|||++||++||+|++|+++++.++.+.++||+||.|+.+.+...+.+.|+. +.+|+.+++++.
T Consensus 163 vd~~~~l~~~R~iKs~~Ei~~~r~a~~i~~~~~~~~~~~~~~G~tE~ei~a~~~~~~~~~g~~-----~~~~~~i~~~g~ 237 (440)
T 2v3z_A 163 IDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGAR-----YPSYNTIVGSGE 237 (440)
T ss_dssp ECCHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCC-----EESSCCEEEEGG
T ss_pred ECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC-----CCCCCCEECCCC
T ss_conf 315999999983599999999999999999999988876468988999999999999984311-----246785542688
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 64211121222200134057997876653000231112333-44443210367787765432211001121221048999
Q gi|254780899|r 82 NHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPV-GKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAI 160 (273)
Q Consensus 82 N~~~~H~~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~-G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~ 160 (273)
|.+.+|+.|+++++++||+|++|+|+.|+||++|++|||++ |+++++++++|++++++++++++++|||++++||+.++
T Consensus 238 ~~~~~h~~~~~~~~~~gd~v~~D~g~~~~gY~sD~tRt~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~ 317 (440)
T 2v3z_A 238 NGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEV 317 (440)
T ss_dssp GGGSTTCCCCCSBCCTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCTTCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEEECCEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 65542246773314489879998124999786366369997992899999999876689999998724798289999999
Q ss_pred HHHHHHCC------------------C-EECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCC
Q ss_conf 99998629------------------6-0104752123322113540365315645456645116737883111443777
Q gi|254780899|r 161 QRYAHSER------------------Y-SVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGS 221 (273)
Q Consensus 161 ~~~~~~~g------------------~-~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~ 221 (273)
.+.+.+.+ + ..+.|++|||+|+.+||.|.+. .+++.+|+||||||||||+|++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~Gh~~Gl~~he~p~~~------~~~~~~L~~gMv~tiEPgiy~~~~ 391 (440)
T 2v3z_A 318 VRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYG------QDRSRILEPGMVLTVAPGLYIAPD 391 (440)
T ss_dssp HHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCSSSSSCCSCCC------GGGCCCCCTTCEEEECCEEEECTT
T ss_pred HHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCEECCCCEEEECCEEEECCC
T ss_conf 99999754541754443223210465456521686686898888788567------999987589978998997686898
Q ss_pred CCEECCCCCEEEECCCCEEEEEEEEEEECCCCCEECCC-CCCCCCC
Q ss_conf 62564688668833787167844218984798576526-7988676
Q gi|254780899|r 222 SAKVLSDGWTAVTRDRSLSAQYEHTIGITKAGCEIFTL-SPNNLGQ 266 (273)
Q Consensus 222 ~~~~~~d~w~~~~~~g~~~~~~Ed~vlVT~~G~E~LT~-~p~~l~~ 266 (273)
+ .+...++++|+|+||||+||++|||+||+ .||+.++
T Consensus 392 ~--------~~~~~~~~~GvriEd~vlVte~G~e~LT~~~pk~~~e 429 (440)
T 2v3z_A 392 A--------EVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEE 429 (440)
T ss_dssp C--------SSCGGGTTEEEECBEEEEEETTEEEESSTTSCCSHHH
T ss_pred C--------EECCCCCEEEEEECCEEEECCCCCEECCCCCCCCHHH
T ss_conf 5--------0412277379997238999799573489999999999
No 8
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=0 Score=385.67 Aligned_cols=236 Identities=19% Similarity=0.338 Sum_probs=217.6
Q ss_pred CCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77203313978853999999999999999999999999757998899999999999998598303443324445532344
Q gi|254780899|r 2 LSSSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSI 81 (273)
Q Consensus 2 ~~~~~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~ 81 (273)
+|+.......|.|||++||++||+|+++++++++++.+.++||++|.|+.+.+.+.+.+.|+.. ..|+..+++|.
T Consensus 121 vd~~~~~~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~-----~~~~~~v~~g~ 195 (359)
T 2zsg_A 121 IGIDDEVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGAEG-----VAFDTIVASGC 195 (359)
T ss_dssp EECHHHHHHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHHHTTCSE-----ESSCCEEEEGG
T ss_pred ECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC-----CCCCCEECCCC
T ss_conf 4171699997707999999999999999999999988752378857787766666777517642-----24661431467
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 64211121222200134057997876653000231112333444432103677877654322110011212210489999
Q gi|254780899|r 82 NHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQ 161 (273)
Q Consensus 82 N~~~~H~~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~ 161 (273)
|...+|+.++++++++||+|++|+|+.|+||++|++|||++|+|+++++++|++++++++++++++|||+++++++++++
T Consensus 196 ~~~~~~~~~~~~~~~~gd~v~~d~g~~~~gY~~d~~Rt~~~G~p~~~~~~~~~~~~~~~~~~~~~~kpG~~~~~v~~~~~ 275 (359)
T 2zsg_A 196 RSALPHGKASDKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAR 275 (359)
T ss_dssp GGGSTTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHH
T ss_pred CCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 74444355444320136669994033038712330232046874078999999999999999997179995331589999
Q ss_pred HHHHHCCCE-ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCEE
Q ss_conf 999862960-1047521233221135403653156454566451167378831114437776256468866883378716
Q gi|254780899|r 162 RYAHSERYS-VVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLS 240 (273)
Q Consensus 162 ~~~~~~g~~-~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~~ 240 (273)
+++++.||. .+.+++|||+|+.+||.|.+. .+++.+|+|||||+|||++|++ |..|
T Consensus 276 ~~~~~~g~~~~~~~~~GHgiGl~~~e~P~i~------~~~~~~L~~gmv~~iEp~~~~~-----------------~~~g 332 (359)
T 2zsg_A 276 EFIREKGYGEFFGHSLGHGIGLEVHEGPAIS------FRNDSPLPENVVFTVEPGIYLE-----------------GKFG 332 (359)
T ss_dssp HHHHHTTCGGGBCSCSEEECSSSSSEEEEES------TTCCCBCCTTBEEEECCEEEET-----------------TTEE
T ss_pred HHHHHCCCCCCCCCCEECCCCCCCCCCCCCC------CCCCCCCCCCCEEEECCCEEEC-----------------CCCE
T ss_conf 9999728876355516551078778898216------8989756998099989918829-----------------9778
Q ss_pred EEEEEEEEECCCCCEECCCCCCCCC
Q ss_conf 7844218984798576526798867
Q gi|254780899|r 241 AQYEHTIGITKAGCEIFTLSPNNLG 265 (273)
Q Consensus 241 ~~~Ed~vlVT~~G~E~LT~~p~~l~ 265 (273)
+|+||+|+||+||+|+||.+|++|.
T Consensus 333 ~r~ed~~~Vt~~G~e~lt~~p~~l~ 357 (359)
T 2zsg_A 333 IRIEEDVVLKEQGCEILTTLPRSIF 357 (359)
T ss_dssp EECBEEEEEETTEEEECCCSCCSCE
T ss_pred EEEEEEEEECCCCCEECCCCCCCEE
T ss_conf 9983599994992478979698358
No 9
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=0 Score=386.70 Aligned_cols=254 Identities=15% Similarity=0.085 Sum_probs=219.5
Q ss_pred CCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCC
Q ss_conf 7720331397885399999999999999999999999975799889999999999999859830-344332444553234
Q gi|254780899|r 2 LSSSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIP-ATLNYRGYKKSCCTS 80 (273)
Q Consensus 2 ~~~~~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~-~~~~~~~f~~~~~~s 80 (273)
+|........|.|||++||++||+|+++++.++.++.+.++||+||.|++..+.+.+.+.|... ++.....+....+.+
T Consensus 145 vd~~~~i~~~R~iKs~~Ei~~lr~A~~i~~~a~~~~~~~~~~G~tE~ev~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 224 (402)
T 1kp0_A 145 VDVGZPVMWZRVIKSSEEZBLIRZGARISDIGGAATAAAISAGVPEYEVAIATTBAMVRZIARBFPYVELMDTWIWFQSG 224 (402)
T ss_dssp EECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEEEEG
T ss_pred EECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECC
T ss_conf 63536899986459999999999978999999999999840688477999999999998546578865434765311036
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 46421112122220013405799787665300023111233344443210367787765432211001121221048999
Q gi|254780899|r 81 INHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAI 160 (273)
Q Consensus 81 ~N~~~~H~~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~ 160 (273)
.|.+.+|+.|+++++++||+|++|+|+.|+||++|++|||++|+|+++++++|++++++++++++++|||+++++|++++
T Consensus 225 ~~~~~~h~~~~~~~i~~Gd~v~iD~g~~~~Gy~aD~tRt~~~g~~~~~~~~~~~~~~~~~~a~~~~~kpG~~~~~v~~~~ 304 (402)
T 1kp0_A 225 INTDGAHNPVTBRVVZRGDILSLNCFPMIFGYYTALERTLFLZZVBDASLZIWZKNTAVHRRGLZLIKPGARCKDIASEL 304 (402)
T ss_dssp GGGGSTTCCEECCBCCTTCEEEEEEEEEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHH
T ss_pred CCCCCCCCCCCCEEECCCCEEEEECCCCEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 66565546887315418837998356405676313001001377218899999999999999999726998799999999
Q ss_pred HHHHHHCCCE-ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCE
Q ss_conf 9999862960-104752123322113540365315645456645116737883111443777625646886688337871
Q gi|254780899|r 161 QRYAHSERYS-VVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSL 239 (273)
Q Consensus 161 ~~~~~~~g~~-~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~ 239 (273)
++++.+.|+. .+.|++|||+|+..||.|.... .....+++.+||+||||+|||++|.+.. .+|..
T Consensus 305 ~~~~~~~g~~~~~~~~~GHgiGl~~h~~~~~~~-~~~~~~~~~~Le~GMv~~iEPg~y~~~~-------------~~g~g 370 (402)
T 1kp0_A 305 NBMYRZWDLLRYRTFGYGHSFGVLBHYYGREAG-VELREDIZTVLEPGMVVSMEPMVMBPEG-------------EPGAG 370 (402)
T ss_dssp HHHHHHTTCGGGBCSCSCBBCEEEETTEECCTT-CBCCTTCCCBCCTTCEEEECCEEEECTT-------------STTCE
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCEECCCCEEEECCEEECCCC-------------CCCEE
T ss_conf 999997086742688765505877888876788-7005999978489978999397205876-------------68803
Q ss_pred EEEEEEEEEECCCCCEECCCCCCCCCCCCC
Q ss_conf 678442189847985765267988676887
Q gi|254780899|r 240 SAQYEHTIGITKAGCEIFTLSPNNLGQPGI 269 (273)
Q Consensus 240 ~~~~Ed~vlVT~~G~E~LT~~p~~l~~~~~ 269 (273)
|+|+||+|+||++|+|+||++|+++++..|
T Consensus 371 GvriEd~v~Vt~~G~e~LT~~P~~~~~~ii 400 (402)
T 1kp0_A 371 GYREHDILVIKENBTENITGFPFGPEHNII 400 (402)
T ss_dssp EEECBEEEEEETTEEEECCCSCCSTTTCEE
T ss_pred EEEEEEEEEECCCCCEECCCCCCCHHHCCC
T ss_conf 999988999969925799899998788116
No 10
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, acetylation, peptidase D, polymorphism, collagen degradation, metalloaminopeptidase; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=100.00 E-value=0 Score=391.87 Aligned_cols=256 Identities=18% Similarity=0.219 Sum_probs=213.4
Q ss_pred HHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 31397885399999999999999999999999975799889999999999999859830344332444553234464211
Q gi|254780899|r 7 RESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVIC 86 (273)
Q Consensus 7 ~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~~ 86 (273)
.....|.|||++||++||+|++|+++++.++++.++||++|.||++.+...+.++|+.. +.+|+.++++|.|++++
T Consensus 180 ~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~~~~G~~E~ei~~~~~~~~~~~g~~~----~~~~~~iv~~g~n~~~~ 255 (494)
T 2iw2_A 180 EIVECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMR----HSSYTCICGSGENSAVL 255 (494)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHCCC----EESSCCEEEEGGGGGCS
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC----CCCCCCCCCCCCCCCCC
T ss_conf 99998755999999999999999999999988744689989999998888987427877----67766555446565443
Q ss_pred CC----CCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 12----122220013405799787665300023111233-3444432103677877654322110011212210489999
Q gi|254780899|r 87 HG----IPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYP-VGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQ 161 (273)
Q Consensus 87 H~----~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~-~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~ 161 (273)
|| .++++++++||+|++|+|+.|+||++|++|||+ .|+++++|+++|++++++++++++++|||+++++++.+++
T Consensus 256 H~~~~~~~~~~~l~~Gd~vl~D~g~~~~gY~sDitRT~~~~G~~s~~~~~~~~~v~~~~~~~~~~~kpG~~~~~~~~~~~ 335 (494)
T 2iw2_A 256 HYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLAD 335 (494)
T ss_dssp SCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 33454578864334898688753222488856777587530467788889999999999999986178985110127889
Q ss_pred HHHHHC------------------CCE-ECCCCCCCCCCCCCCCCCEEEECCC-------CCCCCCCEECCCCEEEECCE
Q ss_conf 999862------------------960-1047521233221135403653156-------45456645116737883111
Q gi|254780899|r 162 RYAHSE------------------RYS-VVEVFCGHGIGKSFHEKPEILHFYD-------PLYPSVGTFQEGMVFTIEPM 215 (273)
Q Consensus 162 ~~~~~~------------------g~~-~~~~~~GHgiGl~~hE~P~i~~~~~-------~~~~~~~~le~GMV~aiEP~ 215 (273)
+++.+. ++. .+.|++|||||+++||.|.+..... .......+|+||||||||||
T Consensus 336 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~H~~GH~iGl~vHd~p~~~~~~~~~~~~~~~~~~~~~~L~~GMV~tiEPG 415 (494)
T 2iw2_A 336 RIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPG 415 (494)
T ss_dssp HHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCSCSSCTTCCCCCSTTGGGCSCCCBCCTTCEEEECCE
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 99998642147653028999875368323246988877763567766576543345656556778975489999988996
Q ss_pred EECCCCCCE-ECCCCCEEE--------ECCCCEEEEEEEEEEECCCCCEECCCCCCCCCC
Q ss_conf 443777625-646886688--------337871678442189847985765267988676
Q gi|254780899|r 216 LNVGGSSAK-VLSDGWTAV--------TRDRSLSAQYEHTIGITKAGCEIFTLSPNNLGQ 266 (273)
Q Consensus 216 i~~~~~~~~-~~~d~w~~~--------~~~g~~~~~~Ed~vlVT~~G~E~LT~~p~~l~~ 266 (273)
||++..... .+.|+|+.. .-.|..|+||||+|+||++|||+||..|+++++
T Consensus 416 iY~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gGiRiED~vlVTe~G~e~LT~~p~~~~e 475 (494)
T 2iw2_A 416 IYFIDHLLDEALADPARASFFNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEE 475 (494)
T ss_dssp EECCHHHHHHHHHCHHHHTTBCHHHHHHHTTCCEEECBEEEEECSSSEEECCCCCCSHHH
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCEEEECEEEEECCCCCEECCCCCCCHHH
T ss_conf 365754210013677525523753143424887224231899979967858889999999
No 11
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii OT3} PDB: 2how_A
Probab=100.00 E-value=0 Score=385.54 Aligned_cols=234 Identities=20% Similarity=0.235 Sum_probs=215.1
Q ss_pred CCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77203313978853999999999999999999999999757998899999999999998598303443324445532344
Q gi|254780899|r 2 LSSSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSI 81 (273)
Q Consensus 2 ~~~~~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~ 81 (273)
+|..+.....|.|||++||++||+|+++++.+++++++.++||+||.|+...++......+.. .+|+.++++|.
T Consensus 119 ~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~~G~tE~ei~~~~~~~~~~~~~~------~~~~~i~~~g~ 192 (356)
T 1wn1_A 119 QPLSSLIKELRMIKDKEEVKMMEHASRIADKVFEEILTWDLIGMKERELALKIELLIRELSDG------IAFEPIVASGE 192 (356)
T ss_dssp EETHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHHHSSE------ESSCCEEEEGG
T ss_pred EECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC------CCCCCCCCCCC
T ss_conf 986799999997399999999999999899999999999763996999988898765403333------45675114678
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 64211121222200134057997876653000231112333444432103677877654322110011212210489999
Q gi|254780899|r 82 NHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQ 161 (273)
Q Consensus 82 N~~~~H~~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~ 161 (273)
|.+.+|+.|+++++++||+|++|+|+.|+||++|++|||++|+++++++++|++++++++++++++|||++++||+++++
T Consensus 193 ~~~~~h~~~~~r~~~~Gd~v~id~g~~~~gY~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~~v~~~~~ 272 (356)
T 1wn1_A 193 NAANPHHEPGERKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAR 272 (356)
T ss_dssp GGGCTTCCCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSSCCHHHHHHHHHHHHHHHHHHHHCBTTSBHHHHHHHHH
T ss_pred CCCCCEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 63100001435533379757998740123324676632026886388899999999999999986789989999899887
Q ss_pred HHHHHCCCE-ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCEE
Q ss_conf 999862960-1047521233221135403653156454566451167378831114437776256468866883378716
Q gi|254780899|r 162 RYAHSERYS-VVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLS 240 (273)
Q Consensus 162 ~~~~~~g~~-~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~~ 240 (273)
+++.+.||. ...+++|||+|+.+||.|.+. .+.+.+|++||||+|||++|.+ |..|
T Consensus 273 ~~~~~~g~~~~~~~~~GHgiG~~~~e~p~i~------~~~~~~l~~gmv~~iep~~~~~-----------------~~~g 329 (356)
T 1wn1_A 273 EVISKAGYGEYFIHRTGHGLGLDVHEEPYIG------PDGEVILKNGMTFTIEPGIYVP-----------------GLGG 329 (356)
T ss_dssp HHHHTTTCGGGCCSCSEEECSSSSSEEEEES------TTCCCBCCTTCEEEECCEEEET-----------------TTEE
T ss_pred HHHHHHCCCCCCCCCCEEECCCCCCCCCCCC------CCCCCEECCCCEEEECCEEEEC-----------------CCCE
T ss_conf 7888726776677873775158757897227------9999787899789997914879-----------------9886
Q ss_pred EEEEEEEEECCCCCEECCCCCCCC
Q ss_conf 784421898479857652679886
Q gi|254780899|r 241 AQYEHTIGITKAGCEIFTLSPNNL 264 (273)
Q Consensus 241 ~~~Ed~vlVT~~G~E~LT~~p~~l 264 (273)
+|+||+|+||++|+|+||.+|++|
T Consensus 330 ~~~ed~~~Vt~~G~e~Lt~~p~~l 353 (356)
T 1wn1_A 330 VRIEDDIVVDEGKGRRLTKAEREL 353 (356)
T ss_dssp EECBEEEEEETTEEEESCCCCCSC
T ss_pred EEECCEEEEECCCCEECCCCCCEE
T ss_conf 996767999899878898999768
No 12
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/proteomics initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii OT3} PDB: 1pv9_A
Probab=100.00 E-value=0 Score=382.21 Aligned_cols=236 Identities=22% Similarity=0.314 Sum_probs=215.8
Q ss_pred CCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77203313978853999999999999999999999999757998899999999999998598303443324445532344
Q gi|254780899|r 2 LSSSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSI 81 (273)
Q Consensus 2 ~~~~~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~ 81 (273)
+|..+.....|.|||++||++||+|+++++.++.++.+.++||+||.|+.+.+...+.+.|+... .|..+++++.
T Consensus 115 vd~~~~i~~lR~iKs~~EI~~~r~a~~i~~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~-----~~~~~~~~~~ 189 (351)
T 1wy2_A 115 KKVDDVIRDMRIIKSEKEIKIIEKACEIADKAVMAAIEEITEGKKEREVAAKVEYLMKMNGAEKP-----AFDTIIASGY 189 (351)
T ss_dssp EECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSEE-----SSCCEEEEGG
T ss_pred EECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCC-----CCCCEEECCC
T ss_conf 88489999988219999999999999888898887776415783431133333344420576312-----5784030467
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 64211121222200134057997876653000231112333444432103677877654322110011212210489999
Q gi|254780899|r 82 NHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQ 161 (273)
Q Consensus 82 N~~~~H~~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~ 161 (273)
|.+.+|+.++++++++||++++|+++.|+||++|++|||++|+|+++++++|+++++++.++++++|||++++||+++++
T Consensus 190 ~~~~~~~~~~~~~l~~gd~v~id~g~~~~gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~ 269 (351)
T 1wy2_A 190 RSALPHGVASDKRIERGDLVVIDLGALYQHYNSDITRTIVVGSPNEKQKEIYEIVLEAQKKAVESAKPGITAKELDSIAR 269 (351)
T ss_dssp GGGSTTCBCCSCBCCTTCEEEEEECEEETTEECCEEEEEESSCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 75453234665402389989999567358863563458990899999999999999999999997689988999999999
Q ss_pred HHHHHCCCE-ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCEE
Q ss_conf 999862960-1047521233221135403653156454566451167378831114437776256468866883378716
Q gi|254780899|r 162 RYAHSERYS-VVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSLS 240 (273)
Q Consensus 162 ~~~~~~g~~-~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~~ 240 (273)
+++++.||. .+.|++|||+|+.+||.|.+. .+++.+|++||||+|||++|.+ +.+|
T Consensus 270 ~~~~~~g~~~~~~~~~GHgiGl~~~E~p~i~------~~~~~~l~~gmv~~iEp~~~~~-----------------~~~g 326 (351)
T 1wy2_A 270 NIIAEYGYGEYFNHSLGHGVGLEVHEWPRVS------QYDETVLREGMVITIEPGIYIP-----------------KIGG 326 (351)
T ss_dssp HHHHHTTCGGGCCSCSEEECSSSSSEEEEES------TTCCCBCCTTCEEEECCEEEET-----------------TTEE
T ss_pred HHHHHCCCCCCCCCCEEECCCCCCCCCCCCC------CCCCCEECCCCEEEECCEEEEC-----------------CCCE
T ss_conf 9999849985378861411288878798568------8999765899889999977979-----------------9898
Q ss_pred EEEEEEEEECCCCCEECCCCCCCCC
Q ss_conf 7844218984798576526798867
Q gi|254780899|r 241 AQYEHTIGITKAGCEIFTLSPNNLG 265 (273)
Q Consensus 241 ~~~Ed~vlVT~~G~E~LT~~p~~l~ 265 (273)
+|+||+|+||++|+|+||.+|++|.
T Consensus 327 ~riEd~v~Vt~~G~e~Lt~~p~~li 351 (351)
T 1wy2_A 327 VRIEDTILITKNGSKRLTKTERELI 351 (351)
T ss_dssp EECBEEEEEETTEEEESCCSCSCCC
T ss_pred EEEEEEEEECCCCCEECCCCCCCCC
T ss_conf 9987799997992578999981209
No 13
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=100.00 E-value=0 Score=386.82 Aligned_cols=253 Identities=15% Similarity=0.060 Sum_probs=204.7
Q ss_pred HHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 31397885399999999999999999999999975799889999999999999859830344332444553234464211
Q gi|254780899|r 7 RESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVIC 86 (273)
Q Consensus 7 ~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~~ 86 (273)
.....|.|||++||++||+|++|+++++.++++.++||+||.|+++.+...+...++ ..+|+.++|+|.|++++
T Consensus 152 ~i~~lR~IKs~~EI~~mR~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~------~~~~~~ivasG~n~a~~ 225 (517)
T 3l24_A 152 FYHYHRAYKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEIQQAYLLATQHSEN------DNPYGNIVALNENCAIL 225 (517)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTCCGG------GSSSCCEEEEGGGGGCT
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC------CCCCCCEECCCCCCCCC
T ss_conf 999988379999999999999999999998775068987499999999999971797------68878755257886676
Q ss_pred CCCCCCCCC-CCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 121222200-1340579978766530002311123334444321036778776543221100112122104899999998
Q gi|254780899|r 87 HGIPSNKQL-REGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAH 165 (273)
Q Consensus 87 H~~p~d~~l-~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~ 165 (273)
||.|+++.+ ++||+|++|+|+.|+||++|++|||++|.++ +++++|+.+++++.++++++|||+++++++.++.+++.
T Consensus 226 H~~~~~~~~~~~gdlvliD~G~~~~GY~sDitRT~~vg~~~-e~~~~y~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~i~ 304 (517)
T 3l24_A 226 HYTHFDRVAPATHRSFLIDAGANFNGYAADITRTYDFTGEG-EFAELVATMKQHQIALMNQLAPGKLYGELHLDCHQRVA 304 (517)
T ss_dssp TCCCCCSSCCSSCCEEEEEEEEEETTEEEEEEEEEESSSCS-HHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHH
T ss_pred CCCCCHHCCCCCCCEEEEECCCEECCCCCCCEEEEEECCCH-HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 64651002356764389842620065124531899978604-57799999999999999985478728888999999999
Q ss_pred H------------------CCCE-ECCCCCCCCCCCCCCCCCEEEECCCC----------CCCCCCEECCCCEEEECCEE
Q ss_conf 6------------------2960-10475212332211354036531564----------54566451167378831114
Q gi|254780899|r 166 S------------------ERYS-VVEVFCGHGIGKSFHEKPEILHFYDP----------LYPSVGTFQEGMVFTIEPML 216 (273)
Q Consensus 166 ~------------------~g~~-~~~~~~GHgiGl~~hE~P~i~~~~~~----------~~~~~~~le~GMV~aiEP~i 216 (273)
+ .+|. .+.|++|||||+++||.|.+...... ..+.+.+|+|||||||||||
T Consensus 305 ~~l~~~g~~~~~~~~~~~~~~~~~~~~H~~GHgiGl~vHE~p~~~~~~~~~~~~~~~~~~~~~~~~~Le~GMV~TIEPGI 384 (517)
T 3l24_A 305 QTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIGLQVHDVGGFMADEQGAHQEPPEGHPFLRCTRKIEANQVFTIEPGL 384 (517)
T ss_dssp HHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCSSSSSCCCCTTC---------------CCTTCBCCTTEEEEECCEE
T ss_pred HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
T ss_conf 98865687304599999715545679999758888665678665556655555665455544568732899899889972
Q ss_pred ECCCCCCEECCCCCEE--------EECCCCEEEEEEEEEEECCCCCEECCC-CCCCCCC
Q ss_conf 4377762564688668--------833787167844218984798576526-7988676
Q gi|254780899|r 217 NVGGSSAKVLSDGWTA--------VTRDRSLSAQYEHTIGITKAGCEIFTL-SPNNLGQ 266 (273)
Q Consensus 217 ~~~~~~~~~~~d~w~~--------~~~~g~~~~~~Ed~vlVT~~G~E~LT~-~p~~l~~ 266 (273)
|++......+.+.|.. ....+..|+||||+|+||+||||+||+ .|.+|..
T Consensus 385 Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gGvRIED~VlVTedG~E~LT~~~~~~~~~ 443 (517)
T 3l24_A 385 YFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHEDSLENMTRELRLRLTT 443 (517)
T ss_dssp ECCHHHHHHHHTSGGGGGBCHHHHHHHGGGCEEECBEEEEECSSCEEEHHHHTTCC---
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCEEEECCCCCEECCCCCCCCCCH
T ss_conf 74722001124655441014321466537884332748999899576899999977347
No 14
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=0 Score=383.14 Aligned_cols=254 Identities=15% Similarity=0.111 Sum_probs=222.2
Q ss_pred CCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 77203313978853999999999999999999999999757998899999999999998598303-44332444553234
Q gi|254780899|r 2 LSSSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPA-TLNYRGYKKSCCTS 80 (273)
Q Consensus 2 ~~~~~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~-~~~~~~f~~~~~~s 80 (273)
+|........|.|||++||++||+|+++++.++.++.+.++||++|.|+.+.+.+...+.++... ...+.+|..+++++
T Consensus 145 vd~~~~i~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 224 (401)
T 1chm_A 145 VDVAAACMRMRMIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFEDVELMDTWTWFQSG 224 (401)
T ss_dssp EECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHCSSCCBCCCEEEEEEG
T ss_pred EECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 51667999988119999999999989999999999999987189789999999999988421233433445655413566
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 46421112122220013405799787665300023111233344443210367787765432211001121221048999
Q gi|254780899|r 81 INHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAI 160 (273)
Q Consensus 81 ~N~~~~H~~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~ 160 (273)
.|...+|+.++++++++||+|++|+|+.|+||++|++|||++|+|+++++++|++++++++++++++|||+++++|++++
T Consensus 225 ~~~~~~h~~~~~~~i~~Gd~v~id~g~~~~GY~~d~tRt~~vG~~~~~~~~~~~~~~~~~~~~~~~~rpG~~~~~i~~~~ 304 (401)
T 1chm_A 225 INTDGAHNPVTTRKVNKGDILSLNCFPMIAGYYTALERTLFLDHCSDDHLRLWQVNVEVHEAGLKLIKPGARCSDIAREL 304 (401)
T ss_dssp GGGGSTTCCEESCBCCTTCEEEEEEECEETTEECCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 77545544422244669988999503068764046325786033444320235789999999998568884640599999
Q ss_pred HHHHHHCCCEE-CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECCCCE
Q ss_conf 99998629601-04752123322113540365315645456645116737883111443777625646886688337871
Q gi|254780899|r 161 QRYAHSERYSV-VEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRDRSL 239 (273)
Q Consensus 161 ~~~~~~~g~~~-~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~g~~ 239 (273)
++.+++.||.. +.+.+|||+|+..||.|..... ....+.+.+|++||||+|||++|++.. .+|..
T Consensus 305 ~~~~~~~g~~~~~~~~~GhgiG~~~~~~~~~~~~-~~~~~~~~~L~~GMv~siEp~iy~~~~-------------~~g~~ 370 (401)
T 1chm_A 305 NEIFLKHDVLQYRTFGYGHSFGTLSHYYGREAGL-ELREDIDTVLEPGMVVSMEPMIMLPEG-------------LPGAG 370 (401)
T ss_dssp HHHHHHHTCGGGBCSCSCBBCSBEETTEECCTTS-BCCTTCCCBCCTTCEEEECCEEEECTT-------------STTCE
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EECCCCCCEECCCCEEEECCEEECCCC-------------CCCEE
T ss_conf 9999976996115777566478778888766887-024899988889978998898674677-------------67512
Q ss_pred EEEEEEEEEECCCCCEECCCCCCCCCCCCC
Q ss_conf 678442189847985765267988676887
Q gi|254780899|r 240 SAQYEHTIGITKAGCEIFTLSPNNLGQPGI 269 (273)
Q Consensus 240 ~~~~Ed~vlVT~~G~E~LT~~p~~l~~~~~ 269 (273)
|+|+||+|+||++|+|+||.+|++++.+.|
T Consensus 371 gvr~Ed~v~Vt~~G~e~LT~~P~~~~~~~i 400 (401)
T 1chm_A 371 GYREHDILIVNENGAENITKFPYGPEKNII 400 (401)
T ss_dssp EEECBEEEEEETTEEEECCCSCCSHHHHEE
T ss_pred EEEEEEEEEECCCCCEECCCCCCCHHHCCC
T ss_conf 899988999989916788899998353443
No 15
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcription; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=100.00 E-value=0 Score=373.56 Aligned_cols=262 Identities=18% Similarity=0.220 Sum_probs=229.2
Q ss_pred CHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCC
Q ss_conf 2033139788539999999999999999999999997579988999999999999985983---0344332444553234
Q gi|254780899|r 4 SSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAI---PATLNYRGYKKSCCTS 80 (273)
Q Consensus 4 ~~~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~---~~~~~~~~f~~~~~~s 80 (273)
+.+-+...++||+++||++||+|++|++++++++.+.++||+|+.||+..+.+++.+.++. .......|++..+|+|
T Consensus 9 ~~~~~~~~~~i~~d~~i~KyR~Aa~Ia~~~l~~v~~~ikpG~s~~El~~~~~~~i~e~gak~~~~~~~~~~G~afPtciS 88 (401)
T 2q8k_A 9 SGEDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTSIS 88 (401)
T ss_dssp -----CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHCC-CCBHHHHHHHHHHHHHHHHHTSSTTCTTCCEEEEEEEEEE
T ss_pred CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEC
T ss_conf 87427777503899999999999999999999999777699979999999999999725853366655467777673611
Q ss_pred CCCCCCCCCC----CCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 4642111212----22200134057997876653000231112333444-----43210367787765432211001121
Q gi|254780899|r 81 INHVICHGIP----SNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKI-----KRAAERILQVTYESLYKGIAAVKLNA 151 (273)
Q Consensus 81 ~N~~~~H~~p----~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~-----~~~~~~l~~~~~~a~~~~i~~ikpG~ 151 (273)
+|++++||.| ++++|++||+|+||+|+.|+||++|++|||++|++ +++++++++++++|++++++++|||+
T Consensus 89 vN~~v~H~~P~~~~~~~~Lk~GDvVkID~G~~~dGY~aD~arT~~vG~~~~~~~s~~~~~l~~aa~~a~~~ai~~vkPG~ 168 (401)
T 2q8k_A 89 VNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGN 168 (401)
T ss_dssp ETTEEECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHCSTTC
T ss_pred CCCEEECCCCCCCCCCEECCCCCEEEEEEEEEECCEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 36664236788888771626999899973112388300325999988704455799999999999998764454137884
Q ss_pred CCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCE-EEECCCC---CCCCCCEECCCCEEEECCEEECCCCCCEECC
Q ss_conf 22104899999998629601047521233221135403-6531564---5456645116737883111443777625646
Q gi|254780899|r 152 NIEDIGKAIQRYAHSERYSVVEVFCGHGIGKSFHEKPE-ILHFYDP---LYPSVGTFQEGMVFTIEPMLNVGGSSAKVLS 227 (273)
Q Consensus 152 ~~~ei~~a~~~~~~~~g~~~~~~~~GHgiGl~~hE~P~-i~~~~~~---~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~ 227 (273)
++++|..+++++++++||..+++++||++|+.+|+.|. |.+.+.. ..+...+|++||||+|||+++.+...+..++
T Consensus 169 ~~~ei~~ai~~v~~~~g~~~v~~~~gH~ig~~~~~~~~~I~~~p~~~~~~~~~~~~le~G~V~aIEp~vstg~g~~~~~~ 248 (401)
T 2q8k_A 169 QNTQVTEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAG 248 (401)
T ss_dssp BHHHHHHHHHHHHHTTTCEECTTCEEEEEBTTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEESSCCCCEECS
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEECCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCCEEECC
T ss_conf 03405899988788559843347655665226726986635689865457898738996818878754305898427878
Q ss_pred CCCEEEE--------------------------------------------------------------CCCCEEEEEEE
Q ss_conf 8866883--------------------------------------------------------------37871678442
Q gi|254780899|r 228 DGWTAVT--------------------------------------------------------------RDRSLSAQYEH 245 (273)
Q Consensus 228 d~w~~~~--------------------------------------------------------------~~g~~~~~~Ed 245 (273)
|+||+.. ++|++.+||||
T Consensus 249 ~~~ti~~~~~~~~y~lk~~~sr~~l~~I~~kf~t~PF~~R~l~de~~~~~gl~e~v~~~~l~~Ypvl~e~~g~~vAqfEh 328 (401)
T 2q8k_A 249 QRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKF 328 (401)
T ss_dssp CCCCEEEECTTCCCCCSSHHHHHHHHHHHHHHTTSCEEGGGCC--HHHHHHHHHHHHTTSEEEECCEECCTTCCEEEEEE
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCEECCCCEEECCCCEEEEEEE
T ss_conf 87569853644445566689999999999876987776666276167899999998679732479638018998989888
Q ss_pred EEEECCCCCEECCCCCCCCC
Q ss_conf 18984798576526798867
Q gi|254780899|r 246 TIGITKAGCEIFTLSPNNLG 265 (273)
Q Consensus 246 ~vlVT~~G~E~LT~~p~~l~ 265 (273)
||+||++|+++||..|-.++
T Consensus 329 Tvlvt~~G~~~lT~~p~~~~ 348 (401)
T 2q8k_A 329 TVLLMPNGPMRITSGPFEPD 348 (401)
T ss_dssp EEEEETTEEEECCCCCCCGG
T ss_pred EEEECCCCCEEECCCCCCHH
T ss_conf 99999999878489999854
No 16
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, structural genomics, center for structural genomics of infectious diseases; HET: SO4; 2.89A {Bacillus anthracis}
Probab=100.00 E-value=0 Score=368.03 Aligned_cols=237 Identities=17% Similarity=0.202 Sum_probs=205.3
Q ss_pred CCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 72033139788539999999999999999999999997579988999999999999985983034433244455323446
Q gi|254780899|r 3 SSSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSIN 82 (273)
Q Consensus 3 ~~~~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N 82 (273)
|........|.|||++||++||+|++++++++.++.+.++||++|.|+.+.+...+.+.|+. +.+|+.+++++.|
T Consensus 160 d~~~~~~~lR~iKs~~Ei~~lr~a~~i~~~~~~~~~~~~~~G~te~e~~a~~~~~~~~~g~~-----~~~~~~~~~~g~~ 234 (427)
T 3ig4_A 160 NVYPNICELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHAKADMMEYELEAQFDFTLKSSGIK-----HHAFNTILASGKN 234 (427)
T ss_dssp ECHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEHHHHHHHHHHHHHHTTCC-----EESSCCEEEEGGG
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC-----CCCCCCCCCCCCC
T ss_conf 44899999970799999999999999999999997651578984899999986678743985-----5665653124788
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 4211121222200134057997876653000231112333-444432103677877654322110011212210489999
Q gi|254780899|r 83 HVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPV-GKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQ 161 (273)
Q Consensus 83 ~~~~H~~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~-G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~ 161 (273)
.+.+|+.+++++|++||+|++|+|+.|+||++|++|||++ |+|+++++++|++++++++++++++|||+++++|+++++
T Consensus 235 ~~~~h~~~~~~~i~~gd~v~~d~g~~~~gY~~d~~RT~~v~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~~v~~a~~ 314 (427)
T 3ig4_A 235 ATVLHYEDNDAQIQNGDLVLLDLGAQKDYYNADISYTFPANGTFSSRQKQIYNIVLNALKETTEIIKPGLKFAALNEHAK 314 (427)
T ss_dssp GGSTTCCCCCSEECTTCEEEEEECEEETTEECCEEEEEETTSCCCHHHHHHHHHHHHHHHHHHHTCCTTCBTHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHH
T ss_conf 75653588876157998899983343245434761799988783599999999999999999987179985899188889
Q ss_pred HHHHHC----CCE----ECCCCCCCCCCCCCCCCC-EEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEE
Q ss_conf 999862----960----104752123322113540-36531564545664511673788311144377762564688668
Q gi|254780899|r 162 RYAHSE----RYS----VVEVFCGHGIGKSFHEKP-EILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTA 232 (273)
Q Consensus 162 ~~~~~~----g~~----~~~~~~GHgiGl~~hE~P-~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~ 232 (273)
+.+.+. |+. ...+++|||+|+.+++.+ .++ ..++.+|+|||||+|||++|+++
T Consensus 315 ~~~~~~~~~~g~~~~~~~~~~~~~Hg~G~~~g~~~~~~~------~~~~~~Le~GMv~~vEP~iy~~~------------ 376 (427)
T 3ig4_A 315 KVLAEGCKAVGLIQEDEELSKYYYHGVSHFLGLDTHDVG------TYKDRVLEEGMVITIEPGLYIEE------------ 376 (427)
T ss_dssp HHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCSSSSSCCC------CCTTCBCCTTCEEEECCEEEEGG------------
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCEECCCCEEEECCEEEECC------------
T ss_conf 999987765485535655567868887787899888678------99998768984899969778569------------
Q ss_pred EECCCCEEEEEEEEEEECCCCCEECCC-CCCCCCC
Q ss_conf 833787167844218984798576526-7988676
Q gi|254780899|r 233 VTRDRSLSAQYEHTIGITKAGCEIFTL-SPNNLGQ 266 (273)
Q Consensus 233 ~~~~g~~~~~~Ed~vlVT~~G~E~LT~-~p~~l~~ 266 (273)
+++|+|+||+|+||++|||+||+ +|++|++
T Consensus 377 ----~~~Gvried~v~VT~~G~e~LT~~~p~~~~~ 407 (427)
T 3ig4_A 377 ----ESIGIRIEDDILVTKDGHENLSKDIIREVEE 407 (427)
T ss_dssp ----GTEEEECBEEEEECSSSEEETTTTSCCSHHH
T ss_pred ----CCEEEEEEEEEEECCCCCEECCCCCCCCHHH
T ss_conf ----8179995029999899783688899999999
No 17
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, activator, chromosomal protein, coiled coil, DNA damage; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=0 Score=368.53 Aligned_cols=250 Identities=13% Similarity=0.078 Sum_probs=208.2
Q ss_pred CCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC------CCHHHHHHHHHHHHHHCCC------------
Q ss_conf 7720331397885399999999999999999999999975799------8899999999999998598------------
Q gi|254780899|r 2 LSSSSRESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPG------TTTEEIDDFVLKFGMENNA------------ 63 (273)
Q Consensus 2 ~~~~~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G------~se~el~~~~~~~~~~~g~------------ 63 (273)
+|........|.|||++||++||+|+++++.+|+++.+.+++| +++.++.+.++..+...+.
T Consensus 165 vd~~~~l~~lR~vKs~~Ei~~ir~A~~i~~~~~~~~~~~i~~gi~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~ 244 (467)
T 3biq_A 165 IDISLGLSKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKLSDKIENKIDDVKFLKQLSPDLSALC 244 (467)
T ss_dssp EECHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTS
T ss_pred EECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
T ss_conf 87589999999629999999999999999999999998765554355664699999999999986323320230110023
Q ss_pred -----CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf -----3034433244455323446421-1121222200134057997876653000231112333444432103677877
Q gi|254780899|r 64 -----IPATLNYRGYKKSCCTSINHVI-CHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTY 137 (273)
Q Consensus 64 -----~~~~~~~~~f~~~~~~s~N~~~-~H~~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~ 137 (273)
.........|++++++|.|.++ +|+.|++++|++||+|++|+|+.|+||++|++|||++ +++++++++|++++
T Consensus 245 ~~~~~~~~~~~~~~y~~IvasG~n~~~~~h~~~~~~~l~~gd~vlvD~G~~y~gY~sDitRT~~v-~~~~~~~~~y~~v~ 323 (467)
T 3biq_A 245 PPNYKFNFDLLDWTYSPIIQSGKKFDLRVSARSTNDQLYGNGCILASCGIRYNNYCSNITRTFLI-DPSEEMANNYDFLL 323 (467)
T ss_dssp CTTCCCCGGGEEESSCCEEECTTCCCCSTTCCCCSSBCCCSEEEEEEECEEETTEECCEEEEEEE-SCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCCCCCCEEEEEE-ECCHHHHHHHHHHH
T ss_conf 43222367877766575115677656567768998632459989998355999561574379985-07589999999999
Q ss_pred HHHHHHH-HCCCCCCCCCHHHHHHHHHHHHCCCE---ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEEC
Q ss_conf 6543221-10011212210489999999862960---1047521233221135403653156454566451167378831
Q gi|254780899|r 138 ESLYKGI-AAVKLNANIEDIGKAIQRYAHSERYS---VVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIE 213 (273)
Q Consensus 138 ~a~~~~i-~~ikpG~~~~ei~~a~~~~~~~~g~~---~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiE 213 (273)
+++++++ +++|||+++++|+.++++++.++|+. .+.|++||||||++||.|.+.+ ..++..+|++||||+||
T Consensus 324 ~~~~~~~~~~~kpG~~~~~v~~~~~~~i~~~g~~~~~~f~h~~GHgiGl~~hE~p~~~~----~~~~~~~L~~GMv~tie 399 (467)
T 3biq_A 324 TLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIGLEFRDSNFILN----VKNDYRKIQRGDCFNIS 399 (467)
T ss_dssp HHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCCGGGBSS----TTCCSCCCCTTCEEEEE
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCEECCCCEEEEC
T ss_conf 99999999997639959999999999999729454432999987825786679998668----89998887999999983
Q ss_pred CEEECCCCCCEECCCCCEEEECCCCEEEEEEEEEEECCCC---CEECCCCCCCCCCC
Q ss_conf 1144377762564688668833787167844218984798---57652679886768
Q gi|254780899|r 214 PMLNVGGSSAKVLSDGWTAVTRDRSLSAQYEHTIGITKAG---CEIFTLSPNNLGQP 267 (273)
Q Consensus 214 P~i~~~~~~~~~~~d~w~~~~~~g~~~~~~Ed~vlVT~~G---~E~LT~~p~~l~~~ 267 (273)
||+|....+ ...+.+|+|+||||+||++| +++||..|++++++
T Consensus 400 pGiy~~~~~-----------~~~~~~girieD~vlvt~~g~~~~~llt~~pk~~~~I 445 (467)
T 3biq_A 400 FGFNNLKDS-----------QSANNYALQLADTVQIPLDETEPPRFLTNYTKAKSQI 445 (467)
T ss_dssp EEEEEECCS-----------SCSSCEEEEEEEEEECCSSTTSCCEESCCSCCCHHHH
T ss_pred CEECCCCCC-----------CCCCCEEEEECCEEEEECCCCCCCEECCCCCCCHHHH
T ss_conf 855668888-----------7668628995127999429985616886799539997
No 18
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H3/H4 chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=100.00 E-value=0 Score=363.60 Aligned_cols=253 Identities=18% Similarity=0.172 Sum_probs=207.5
Q ss_pred CCCHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHH-----HHHHCC--CCCCHHHHHHHHHHHHHHCC----------CC
Q ss_conf 77203313978853999999999999999999999-----999757--99889999999999999859----------83
Q gi|254780899|r 2 LSSSSRESGSINIYTPEELENIRSACNVVARCLDS-----LTPIIK--PGTTTEEIDDFVLKFGMENN----------AI 64 (273)
Q Consensus 2 ~~~~~~~~~~~~IKs~~EI~~~R~A~~i~~~~~~~-----~~~~i~--~G~se~el~~~~~~~~~~~g----------~~ 64 (273)
+|........|.|||++||++||+|++|++++|+. +...++ +++|+.++.+.++..+...+ ..
T Consensus 165 vD~s~~l~~lR~iKs~~EI~~mr~Aa~i~~~~~~~~~~~~i~~~i~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 244 (444)
T 3cb6_A 165 VDASLGLAKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFFQTKSLKLGDI 244 (444)
T ss_dssp EECHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCBHHHHHHHHHGGGGCHHHHTCGGGCCTTC
T ss_pred EECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 96789999998569999999999999989999999999999997502676019999999999998614566544202565
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 03443324445532344642111212222001340579978766530002311123334444321036778776543221
Q gi|254780899|r 65 PATLNYRGYKKSCCTSINHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGI 144 (273)
Q Consensus 65 ~~~~~~~~f~~~~~~s~N~~~~H~~p~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i 144 (273)
.......+|++++++|.|.+++|+.++++.+++||+|++|+|+.|+|||+|++|||++| |+++|+++|+++++++++++
T Consensus 245 ~~~~~~~~y~piv~sG~~~~~~h~~~s~~~~~~gd~vlid~G~~y~gY~sditRT~~v~-ps~e~~~~y~~~~~~~~~~i 323 (444)
T 3cb6_A 245 DLDQLEWCYTPIIQSGGSYDLKPSAITDDRNLHGDVVLCSLGFRYKSYCSNVGRTYLFD-PDSEQQKNYSFLVALQKKLF 323 (444)
T ss_dssp CGGGEEESSCCEEECTTCCCCSTTCCCCSSBCCSSEEEEEECEEETTEECCEEEEEEES-CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCC-CCHHHHHHHHHHHHHHHHHH
T ss_conf 77766566686544468666777889987213588799998131088865411035678-86899999999999999878
Q ss_pred HCCCCCCCCCHHHHHHHHHHHHCCCE---ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCC
Q ss_conf 10011212210489999999862960---104752123322113540365315645456645116737883111443777
Q gi|254780899|r 145 AAVKLNANIEDIGKAIQRYAHSERYS---VVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGS 221 (273)
Q Consensus 145 ~~ikpG~~~~ei~~a~~~~~~~~g~~---~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~ 221 (273)
+++|||+++++|++++++++++.+++ .+.|++|||+|+.+||.|.+.+ .+++.+|++||||+||||++.
T Consensus 324 ~~lkpG~~~~~v~~~~~~~i~~~~~~~~~~~~h~~GHgiGl~~hE~p~~~~-----~~~~~~l~~GMv~~iepGi~~--- 395 (444)
T 3cb6_A 324 EYCRDGAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGIGIEFRESSLLVN-----AKNPRVLQAGMTLNLSIGFGN--- 395 (444)
T ss_dssp HHCSTTCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCBGGGCCS-----TTCCCBCCTTCEEEEEEEEEE---
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCEECCCCEEEECCCCCC---
T ss_conf 644799908998799999999837773036899825527887789987668-----999988899979998685366---
Q ss_pred CCEECCCCCEEEECCCCEEEEEEEEEEECCCCCEECCCCCCCCCCC
Q ss_conf 6256468866883378716784421898479857652679886768
Q gi|254780899|r 222 SAKVLSDGWTAVTRDRSLSAQYEHTIGITKAGCEIFTLSPNNLGQP 267 (273)
Q Consensus 222 ~~~~~~d~w~~~~~~g~~~~~~Ed~vlVT~~G~E~LT~~p~~l~~~ 267 (273)
+.+.+...+..+.+|+|+||||+||++|+|+||++|++|.++
T Consensus 396 ----l~~~~~~~~~~~~~gi~ieDtv~Vt~~g~e~LT~~pk~~~~i 437 (444)
T 3cb6_A 396 ----LINPHPKNSQSKEYALLLIDTIQITRSDPIVFTDSPKAQGDI 437 (444)
T ss_dssp ----EECSSCCTTSCSEEEEEEEEEEECCSSSCEETTCCCCSHHHH
T ss_pred ----CCCCCCCCCCCCCEEEEEEEEEEECCCCCEECCCCCCCHHHC
T ss_conf ----666666644167147999889999799477698999977882
No 19
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=100.00 E-value=0 Score=347.98 Aligned_cols=228 Identities=25% Similarity=0.404 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCC
Q ss_conf 999999999999999999999757998899999999999998598303443324445532344642111212---22200
Q gi|254780899|r 19 ELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVICHGIP---SNKQL 95 (273)
Q Consensus 19 EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~~H~~p---~d~~l 95 (273)
||+.||+|++|++++++++.+.++||+||.||++.++..+.+.|+.++ || +|.|.|+.++|+.| ++++|
T Consensus 2 EIe~~r~Ag~Ia~~~~~~~~~~ikpG~te~el~~~~~~~i~~~G~~~a------fp--~~is~n~~~~h~~P~~~~~~~l 73 (295)
T 1xgs_A 2 DTEKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMELGGKPA------FP--VNLSINEIAAHYTPYKGDTTVL 73 (295)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEES------SC--CEEEETTEEECCCCCTTCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC------CC--EEEECCCCCCCCCCCCCCCEEE
T ss_conf 189999999999999999998786899499999999999998799277------87--0588187525767888888572
Q ss_pred CCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEECCCC
Q ss_conf 13405799787665300023111233344443210367787765432211001121221048999999986296010475
Q gi|254780899|r 96 REGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVF 175 (273)
Q Consensus 96 ~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~~~~~~ 175 (273)
++||+|++|+|+.|+||++|++|||.+|+. ++++++++++|++++++++|||++++||+++++++++++||..++++
T Consensus 74 ~~GDiV~iD~g~~~~GY~aD~arT~~vg~~---~~~l~~a~~~al~~ai~~ikpG~~~~eI~~~i~~~~~~~g~~~~~~~ 150 (295)
T 1xgs_A 74 KEGDYLKIDVGVHIDGFIADTAVTVRVGME---EDELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPIVNL 150 (295)
T ss_dssp CTTCEEEEEEEEEETTEEEEEEEEEETTSC---CCHHHHHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHHTTTCEECTTC
T ss_pred CCCCEEEEEECEEECCEEECCEEEEECCCC---CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 389999997231477387303417761432---07899999999999888745997212677999999998187622353
Q ss_pred CCCCCCC-CCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEE----------------------
Q ss_conf 2123322-11354036531564545664511673788311144377762564688668----------------------
Q gi|254780899|r 176 CGHGIGK-SFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTA---------------------- 232 (273)
Q Consensus 176 ~GHgiGl-~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~---------------------- 232 (273)
+||++|. ..|++|.++++..+ ++..+|++||||||||+++.|...+..++++|+.
T Consensus 151 ~gH~ig~~~~h~~~~i~~~~~~--~~~~~l~~GmV~aIEP~~s~G~g~v~~~~~~~~~~~~~~~~~~~~~~r~~~~~i~~ 228 (295)
T 1xgs_A 151 SGHKIERYKLHAGISIPNIYRP--HDNYVLKEGDVFAIEPFATIGAGQVIEVPPTLIYMYVRDVPVRVAQARFLLAKIKR 228 (295)
T ss_dssp CEEECBTTBSSCSCEECSSCCT--TCCCBCCTTCEEEECCEEESSCSCEEEEEEEEEEEECCCCCCSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCEECCCCCC--CCCCEEEECEEEEEEEEEECCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 6876257556589876364358--99978888808987406864898078779976899726665542777877999998
Q ss_pred ----------------------------------------EECCCCEEEEEEEEEEECCCCCEECCC
Q ss_conf ----------------------------------------833787167844218984798576526
Q gi|254780899|r 233 ----------------------------------------VTRDRSLSAQYEHTIGITKAGCEIFTL 259 (273)
Q Consensus 233 ----------------------------------------~~~~g~~~~~~Ed~vlVT~~G~E~LT~ 259 (273)
++++|++.+||||||+||++|+|+||+
T Consensus 229 ~~~~~pF~~r~l~~~~~~~~~~~~l~~~~~~~~~~~ypvl~~~~g~~vaqfehTv~v~~~g~~v~T~ 295 (295)
T 1xgs_A 229 EYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAIYGYPVLKEIRNGIVAQFEHTIIVEKDSVIVTTE 295 (295)
T ss_dssp HTTTSCEESGGGTTTSCHHHHHHHHHHHHHHTSEEEEEEEEETTCCCEEECBEEEEECSSSEEETTC
T ss_pred HCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEEEEEECCCCCEEECC
T ss_conf 6699765088860544057899999999877993158951801898887788899998997389469
No 20
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=100.00 E-value=0 Score=340.79 Aligned_cols=244 Identities=20% Similarity=0.210 Sum_probs=211.3
Q ss_pred CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 39788539999999999999999999999997579988999999999999985983034433244455323446421112
Q gi|254780899|r 9 SGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVICHG 88 (273)
Q Consensus 9 ~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~~H~ 88 (273)
...+++|++++|+.||+|++|++++++.+.+.++||+|+.||+..+++.+.+.++.+...+ .+|| +|+|+|++++||
T Consensus 36 ~~~~~~~~~d~i~~~r~A~~I~~~~~~~~~~~ikpG~t~~el~~~ie~~i~~~~~~~~~~g-~aFP--~~isvN~~v~H~ 112 (360)
T 2nw5_A 36 MEIENFTESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGERNNG-IGFP--AGMSMNSCAAHY 112 (360)
T ss_dssp CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSGGGG-EEEE--EEEEETTEEECC
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-CCCC--EEEEECCEEEEC
T ss_conf 6655058899999999999999999999997677999499999999999998468776668-8888--167767887726
Q ss_pred CC----CCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 12----22200134057997876653000231112333444432103677877654322110011212210489999999
Q gi|254780899|r 89 IP----SNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYA 164 (273)
Q Consensus 89 ~p----~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~ 164 (273)
.| ++++|++||+|+||+|+.++||++|++|||++|+. .+++++++++++++++++++||++..+++.++++++
T Consensus 113 ~P~~~~~~~~lk~GDlV~ID~G~~~dGY~sD~trT~~vg~~---~~~~~~~~~~a~~aa~~~~~~g~~~~~ig~~i~~v~ 189 (360)
T 2nw5_A 113 TVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKEN---LEPLLVAAREGTETGIKSLGVDVRVCDIGRDINEVI 189 (360)
T ss_dssp CCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCGG---GHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCEEEEECCEEECCEEEEEEEEEEECCC---CHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHEEEH
T ss_conf 88888655453489989995150899898532368761333---206788999999999986534854124334110101
Q ss_pred HHC---------CCEECCCCCCCCCCCC-CCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEE--
Q ss_conf 862---------9601047521233221-1354036531564545664511673788311144377762564688668--
Q gi|254780899|r 165 HSE---------RYSVVEVFCGHGIGKS-FHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTA-- 232 (273)
Q Consensus 165 ~~~---------g~~~~~~~~GHgiGl~-~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~-- 232 (273)
.+. ++..+++++|||+|.. .|+.|.++++. .+...+|++||||+|||+++.+...+...+++|+.
T Consensus 190 ~~~~~~~~~~~~~~~~v~~~~gHgiG~~~~~~~~~ip~~~---~~~~~~le~GmV~tIEp~~s~g~g~i~~~~~~~~~~~ 266 (360)
T 2nw5_A 190 SSYEVEIGGRMWPIRPISDLHGHSISQFRIHGGISIPAVN---NRDTTRIKGDSFYAVETFATTGKGSIDDRPPCSHFVL 266 (360)
T ss_dssp TTCEEECSSSEEECEECTTCCEEEEBTTBSCCSCEECSSC---CCCCCBCCSSEEEEEEEEEESSCSCCEECSCCCCEEE
T ss_pred HHCCEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCEEECCEEEEEEEECCCCCCEEEECCCCEEEEE
T ss_conf 2101101333021010036435555652023788757536---8998889636288765330478844787799449995
Q ss_pred ---------------------------------------------------------------EECCCCEEEEEEEEEEE
Q ss_conf ---------------------------------------------------------------83378716784421898
Q gi|254780899|r 233 ---------------------------------------------------------------VTRDRSLSAQYEHTIGI 249 (273)
Q Consensus 233 ---------------------------------------------------------------~~~~g~~~~~~Ed~vlV 249 (273)
+++||++.+||||||+|
T Consensus 267 ~~~~~~~l~~~~~~~~~~~i~~~~~~~PF~~r~l~~~~~~~~~~~~~l~~l~~~~iv~~ypvl~e~~g~~vAQfEhTvlV 346 (360)
T 2nw5_A 267 NTYKSRKLFNKDLIKVYEFVKDSLGTLPFSPRHLDYYGLVKGGSLKSVNLLTMMGLLTPYPPLNDIDGCKVAQFEHTVYL 346 (360)
T ss_dssp CSSCCCCCCSHHHHHHHHHHHHHTTTCCBCHHHHHHTTCSTTCSHHHHHHHHHTTSEEECCCEECSTTCCEEEEEEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEEEEEE
T ss_conf 15665210148899999999975586765045521100123558999988874697204783180189889887789999
Q ss_pred CCCCCEECCCCC
Q ss_conf 479857652679
Q gi|254780899|r 250 TKAGCEIFTLSP 261 (273)
Q Consensus 250 T~~G~E~LT~~p 261 (273)
|++|+|+||+-+
T Consensus 347 t~~G~eiLT~~~ 358 (360)
T 2nw5_A 347 SEHGKEVLTRGD 358 (360)
T ss_dssp ETTEEEECSCCS
T ss_pred CCCCCEECCCCC
T ss_conf 999777838999
No 21
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=100.00 E-value=0 Score=338.78 Aligned_cols=245 Identities=20% Similarity=0.231 Sum_probs=209.5
Q ss_pred CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 39788539999999999999999999999997579988999999999999985983034433244455323446421112
Q gi|254780899|r 9 SGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVICHG 88 (273)
Q Consensus 9 ~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~~H~ 88 (273)
.+.+..+++++|+.||+|++|+.++++.+.+.|+||||+.||+..+++.+.+.++.+.+..+.+|| +|+|+|++++||
T Consensus 155 ~r~~~~~~ed~l~~~RkAaeI~~~vl~~~~~~IKPGmt~~EI~e~iE~~ir~~~~~~g~~~GiaFP--t~iSvN~~aaHy 232 (478)
T 1b6a_A 155 KKALDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFP--TGCSLNNCAAHY 232 (478)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTCBTTTEEEEEE--EEEEETTEEECC
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC--EEEECCCEEECC
T ss_conf 645432699999999999999999999999767799979999999999999865767765578877--275336775557
Q ss_pred CCC---CCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf 122---22001340579978766530002311123334444321036778776543221100112122104899999998
Q gi|254780899|r 89 IPS---NKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAH 165 (273)
Q Consensus 89 ~p~---d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~ 165 (273)
+|+ +++|++||+|+||+|++|+||++|++|||++|+ ...++++++++|+++++++++||+++++|..+++.+++
T Consensus 233 tP~~~d~~vLk~GDvVkID~Gv~idGYisD~ArTv~VG~---~~~~L~~av~eAl~aaIkaakpGvr~~dIg~aI~ev~e 309 (478)
T 1b6a_A 233 TPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFNP---KYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVME 309 (478)
T ss_dssp CCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSSG---GGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEEEEEEEECCEEEEEEEEEECCC---HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 888877714679998999860798999876667885260---13368999999999999864269827677899999999
Q ss_pred HC---------CCEECCCCCCCCCCCC-CCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECC--------
Q ss_conf 62---------9601047521233221-13540365315645456645116737883111443777625646--------
Q gi|254780899|r 166 SE---------RYSVVEVFCGHGIGKS-FHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLS-------- 227 (273)
Q Consensus 166 ~~---------g~~~~~~~~GHgiGl~-~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~-------- 227 (273)
+. ++..+++++||+||+. +|+.|.+++.. .+...+|++|||||||||++.+...+.-..
T Consensus 310 s~~~ei~~k~yg~k~I~nl~GHgIG~~~ih~~k~Ip~~k---~~~~~kLeeGmVfAIEPf~StG~G~v~ed~~~s~y~k~ 386 (478)
T 1b6a_A 310 SYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPIVK---GGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKN 386 (478)
T ss_dssp TCEEEETTEEEECEECTTCEEEEEBTTBSCCSCEEESSS---SCCCCBCCTTCEEEEEEEEESSCSCCEECSCCCEEEEC
T ss_pred HHCCEECCCCCCCEEECCCCEEEECCCCCCCCCCCCCCC---CCCCCEECCCCEEEEEEEEECCCCEEEECCCCEEEEEE
T ss_conf 706451232248615457202442120214897368657---88898906998899975677798717607871588850
Q ss_pred ---------------------------------------CCC-----------------EEEECCCCEEEEEEEEEEECC
Q ss_conf ---------------------------------------886-----------------688337871678442189847
Q gi|254780899|r 228 ---------------------------------------DGW-----------------TAVTRDRSLSAQYEHTIGITK 251 (273)
Q Consensus 228 ---------------------------------------d~w-----------------~~~~~~g~~~~~~Ed~vlVT~ 251 (273)
+.| -++..+|++++||||||+||+
T Consensus 387 ~~~~~~~Lk~~~ar~lL~~I~~~F~tlPF~~R~le~~~~~k~~~gl~~lv~~giv~~Yp~L~d~~Gs~vAQfEHTIlv~~ 466 (478)
T 1b6a_A 387 FDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILLRP 466 (478)
T ss_dssp TTCCCCCCCSHHHHHHHHHHHHHTTTSCEEHHHHHHTTCCSCHHHHHHHHHTTSEEEECCEECSTTCCEEEEEEEEEECS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEECCCCCEEEEEEEEEEECC
T ss_conf 45664212348889999999986688875155554224077999999997658744688317369988877668999989
Q ss_pred CCCEECCCCC
Q ss_conf 9857652679
Q gi|254780899|r 252 AGCEIFTLSP 261 (273)
Q Consensus 252 ~G~E~LT~~p 261 (273)
+|+|+||+-.
T Consensus 467 ~g~EVlTrgd 476 (478)
T 1b6a_A 467 TCKEVVSRGD 476 (478)
T ss_dssp SCEEETTCCS
T ss_pred CCCEECCCCC
T ss_conf 9586817999
No 22
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=0 Score=337.40 Aligned_cols=238 Identities=17% Similarity=0.109 Sum_probs=201.8
Q ss_pred HCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-----CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 13978853999999999999999999999999757998-----8999999999999985983034433244455323446
Q gi|254780899|r 8 ESGSINIYTPEELENIRSACNVVARCLDSLTPIIKPGT-----TTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSIN 82 (273)
Q Consensus 8 ~~~~~~IKs~~EI~~~R~A~~i~~~~~~~~~~~i~~G~-----se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N 82 (273)
....|.|||+.||+.||+|+.+.+.++..+...+++|+ ++.+++..+.++....+.. ...+|++++++|.|
T Consensus 315 I~~lRaIKn~~EI~~mR~A~~~d~~Al~~~l~~L~~~~~~~~i~e~~~~~~l~~~r~~~~~~----~~~Sf~tI~asG~n 390 (623)
T 3ctz_A 315 ICIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQADF----VDLSFPTISSTGPT 390 (623)
T ss_dssp HHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCBHHHHHHHHHHHHHTSTTE----EEESSCCEEEEGGG
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC----CCCCCCCCCCCCCC
T ss_conf 89977449989999999999988899998888875036305689888999999988632775----45432222355776
Q ss_pred CCCCCCCC---CCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC-CCCCCHHHH
Q ss_conf 42111212---22200134057997876653000231112333444432103677877654322110011-212210489
Q gi|254780899|r 83 HVICHGIP---SNKQLREGDIVNVDVTYVVNGWHGDSSRMYPVGKIKRAAERILQVTYESLYKGIAAVKL-NANIEDIGK 158 (273)
Q Consensus 83 ~~~~H~~p---~d~~l~~GD~v~iD~g~~~~GY~~D~~RT~~~G~~~~~~~~l~~~~~~a~~~~i~~ikp-G~~~~ei~~ 158 (273)
++++||.| +++++++||++++|.|+.|+||++|++|||++|+|+++++++|+++++++.++..+++| |+++.+++.
T Consensus 391 ~A~~Hy~~~~~~~~~i~~gd~~liD~G~~y~gy~tDiTRT~~~G~pt~e~k~~y~~vl~~~~~~~~a~~p~g~~g~~~d~ 470 (623)
T 3ctz_A 391 GAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDS 470 (623)
T ss_dssp GGCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSCCCHHHHHHHHHHHHHHHHHHTCCEETTCBGGGGGG
T ss_pred CCCCCCCCCCCCCCEECCCCCEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 55345321102221001688505655469745036626874478899999988999999999999985799980489999
Q ss_pred HHHHHHHHCCCEECCCCCCCCCC--CCCCCCCEEEECCCCCCCCCCEECCCCEEEECCEEECCCCCCEECCCCCEEEECC
Q ss_conf 99999986296010475212332--2113540365315645456645116737883111443777625646886688337
Q gi|254780899|r 159 AIQRYAHSERYSVVEVFCGHGIG--KSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAVTRD 236 (273)
Q Consensus 159 a~~~~~~~~g~~~~~~~~GHgiG--l~~hE~P~i~~~~~~~~~~~~~le~GMV~aiEP~i~~~~~~~~~~~d~w~~~~~~ 236 (273)
+++..++++|+. +.|++|||+| +++||.|...+. ..+++.+|+||||||+|||+|.+
T Consensus 471 ~ar~~l~~~G~~-~~hgtGHGvG~~l~VHE~P~~i~~---~~~~~~~Le~GMv~siEPG~Y~~----------------- 529 (623)
T 3ctz_A 471 FARSALWDSGLD-YLHGTGHGVGSFLNVHEGPCGISY---KTFSDEPLEAGMIVTDEPGYYED----------------- 529 (623)
T ss_dssp GGTHHHHHTTCC-CSSCSEEBCCSSSCSSCCSCEECT---TCSCSCBCCTTCEEEECCEEEET-----------------
T ss_pred HHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCEECCCCEEEECCEEEEC-----------------
T ss_conf 999999980999-788998658999988889864665---79999774899999889988988-----------------
Q ss_pred CCEEEEEEEEEEECCC------------CCEECCCCCCCCCCCCCC
Q ss_conf 8716784421898479------------857652679886768878
Q gi|254780899|r 237 RSLSAQYEHTIGITKA------------GCEIFTLSPNNLGQPGIS 270 (273)
Q Consensus 237 g~~~~~~Ed~vlVT~~------------G~E~LT~~p~~l~~~~~~ 270 (273)
|.+|+|+||+|+||+. |+|.||..|-+......+
T Consensus 530 g~~GiRiEn~v~Vte~~~~~~~~~~~fl~fe~lT~~P~~~~li~~~ 575 (623)
T 3ctz_A 530 GAFGIRIENVVLVVPVKTKYNFNNRGSLTLEPLTLVPIQTKMIDVD 575 (623)
T ss_dssp TTEEEECBEEEEEEEECCSSCCSSSCEEEEEECCCCCCCGGGSCGG
T ss_pred CCEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCHHHCCHH
T ss_conf 9589970218999978975667887633555222786627544845
No 23
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=97.15 E-value=0.0021 Score=41.61 Aligned_cols=82 Identities=5% Similarity=-0.122 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC--C---CCC-CCCCCCCC---CCCCCCCC-CCCCCCCC
Q ss_conf 999999999999757998899999999999998598303443--3---244-45532344---64211121-22220013
Q gi|254780899|r 28 NVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLN--Y---RGY-KKSCCTSI---NHVICHGI-PSNKQLRE 97 (273)
Q Consensus 28 ~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~--~---~~f-~~~~~~s~---N~~~~H~~-p~d~~l~~ 97 (273)
+.+..+++++.+.++||++..++...+++...+.+....... + .+| .+.+.-.. ...+|++. ..+.+|++
T Consensus 159 ~~~~~a~~aa~~~~~~g~~~~~ig~~i~~v~~~~~~~~~~~~~~~~~v~~~~gHgiG~~~~~~~~~ip~~~~~~~~~le~ 238 (360)
T 2nw5_A 159 VAAREGTETGIKSLGVDVRVCDIGRDINEVISSYEVEIGGRMWPIRPISDLHGHSISQFRIHGGISIPAVNNRDTTRIKG 238 (360)
T ss_dssp HHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHTTCEEECSSSEEECEECTTCCEEEEBTTBSCCSCEECSSCCCCCCBCCS
T ss_pred HHHHHHHHHHHHHHCCCCEECCCCHHHEEEHHHCCEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf 89999999999865348541243341101012101101333021010036435555652023788757536899888963
Q ss_pred CEEEEEEEEEEE
Q ss_conf 405799787665
Q gi|254780899|r 98 GDIVNVDVTYVV 109 (273)
Q Consensus 98 GD~v~iD~g~~~ 109 (273)
|+++.+|.....
T Consensus 239 GmV~tIEp~~s~ 250 (360)
T 2nw5_A 239 DSFYAVETFATT 250 (360)
T ss_dssp SEEEEEEEEEES
T ss_pred CEEEEEEEECCC
T ss_conf 628876533047
No 24
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcription; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=96.73 E-value=0.0038 Score=39.83 Aligned_cols=81 Identities=15% Similarity=0.268 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CC-----
Q ss_conf 9999999999999999997579988999999999999985983034433244455323446421112------12-----
Q gi|254780899|r 22 NIRSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVICHG------IP----- 90 (273)
Q Consensus 22 ~~R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~~H~------~p----- 90 (273)
..+...+.+..+++++.+.++||++..|+...+++.+.+.|..+- .++.| -+....+.|+ .|
T Consensus 145 ~~~~l~~aa~~a~~~ai~~vkPG~~~~ei~~ai~~v~~~~g~~~v-~~~~g------H~ig~~~~~~~~~I~~~p~~~~~ 217 (401)
T 2q8k_A 145 RKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPI-EGMLS------HQLKQHVIDGEKTIIQNPTDQQK 217 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHTTTCEEC-TTCEE------EEEBTTBSSCSCEEESSCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC-CCCCC------CCCCCEEECCCCEECCCCCCCCC
T ss_conf 999999999998764454137884034058999887885598433-47655------66522672698663568986545
Q ss_pred ---CCCCCCCCEEEEEEEEEEE
Q ss_conf ---2220013405799787665
Q gi|254780899|r 91 ---SNKQLREGDIVNVDVTYVV 109 (273)
Q Consensus 91 ---~d~~l~~GD~v~iD~g~~~ 109 (273)
....|++|+++.||.+...
T Consensus 218 ~~~~~~~le~G~V~aIEp~vst 239 (401)
T 2q8k_A 218 KDHEKAEFEVHEVYAVDVLVSS 239 (401)
T ss_dssp HHSCCCBCCTTCEEEEEEEEES
T ss_pred CCCCCCEEEECCEEEEEEEECC
T ss_conf 7898738996818878754305
No 25
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=96.66 E-value=0.0021 Score=41.57 Aligned_cols=89 Identities=10% Similarity=0.051 Sum_probs=58.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEE-CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCC
Q ss_conf 1036778776543221100112122104899999998629601-047521233221135403653156454566451167
Q gi|254780899|r 129 AERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSV-VEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEG 207 (273)
Q Consensus 129 ~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~~-~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~G 207 (273)
.|+.-+++.++++.+.+.||||++..||...++..+.+.+-.. +....+..+++++-+ +...+.|..+++.+|++|
T Consensus 169 ~RkAaeI~~~vl~~~~~~IKPGmt~~EI~e~iE~~ir~~~~~~g~~~GiaFPt~iSvN~---~aaHytP~~~d~~vLk~G 245 (478)
T 1b6a_A 169 FREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFPTGCSLNN---CAAHYTPNAGDTTVLQYD 245 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTCBTTTEEEEEEEEEEETT---EEECCCCCTTCCCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC---EEECCCCCCCCCCCCCCC
T ss_conf 99999999999999997677999799999999999998657677655788772753367---755578888777146799
Q ss_pred CEEEECCEEECCC
Q ss_conf 3788311144377
Q gi|254780899|r 208 MVFTIEPMLNVGG 220 (273)
Q Consensus 208 MV~aiEP~i~~~~ 220 (273)
.++.|+-++.+.+
T Consensus 246 DvVkID~Gv~idG 258 (478)
T 1b6a_A 246 DICKIDFGTHISG 258 (478)
T ss_dssp CCEEEEEEEEETT
T ss_pred CEEEEEEEEEECC
T ss_conf 9899986079899
No 26
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitabread fold; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=96.49 E-value=0.0064 Score=38.32 Aligned_cols=86 Identities=17% Similarity=0.173 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEE-CCCCCCCC--CCCCCCCCCEEEECCCCCCCCCCEEC
Q ss_conf 1036778776543221100112122104899999998629601-04752123--32211354036531564545664511
Q gi|254780899|r 129 AERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSV-VEVFCGHG--IGKSFHEKPEILHFYDPLYPSVGTFQ 205 (273)
Q Consensus 129 ~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~~-~~~~~GHg--iGl~~hE~P~i~~~~~~~~~~~~~le 205 (273)
.|+.-+++.++++.+.+.+|||++..||+.+++..+.+.|... ...+.+.. +.... ...+.+. .+++..|+
T Consensus 84 mR~A~~ia~~al~~a~~~ikpGvte~Ei~~~~~~~~~~~ga~~s~~~y~~fp~s~~~s~--n~~~~h~----~p~~r~l~ 157 (329)
T 2b3h_A 84 MRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSV--NEVICHG----IPDRRPLQ 157 (329)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSSEEEE--TTEEECC----CCCSCBCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEECCC--CEEECCC----CCCCCCCC
T ss_conf 99999999999999998785899799999999999998669735656667786446788--7163178----99874546
Q ss_pred CCCEEEECCEEECCC
Q ss_conf 673788311144377
Q gi|254780899|r 206 EGMVFTIEPMLNVGG 220 (273)
Q Consensus 206 ~GMV~aiEP~i~~~~ 220 (273)
+|.++.|+.+.+..+
T Consensus 158 ~GDiv~iD~~~~~~G 172 (329)
T 2b3h_A 158 EGDIVNVDITLYRNG 172 (329)
T ss_dssp TTCEEEEEEEEEETT
T ss_pred CCCEEEEECCEEECC
T ss_conf 898899843451299
No 27
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=96.39 E-value=0.0095 Score=37.17 Aligned_cols=85 Identities=15% Similarity=0.169 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC---CCCCCCC-CC-CCCCCCCCEEEE
Q ss_conf 999999999999757998899999999999998598303443324445532344---6421112-12-222001340579
Q gi|254780899|r 28 NVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSI---NHVICHG-IP-SNKQLREGDIVN 102 (273)
Q Consensus 28 ~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~---N~~~~H~-~p-~d~~l~~GD~v~ 102 (273)
+.+.++++++.+.++||++..|+...+++.+.+.|..+.. ++. .+.+.-.. .-.++|+ .+ .+.+|++|.++.
T Consensus 109 ~a~~~al~~ai~~ikpG~~~~eI~~~i~~~~~~~g~~~~~-~~~--gH~ig~~~~h~~~~i~~~~~~~~~~~l~~GmV~a 185 (295)
T 1xgs_A 109 EAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPIV-NLS--GHKIERYKLHAGISIPNIYRPHDNYVLKEGDVFA 185 (295)
T ss_dssp HHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHHTTTCEECT-TCC--EEECBTTBSSCSCEECSSCCTTCCCBCCTTCEEE
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC-CCC--CCCCCCCCCCCCCEECCCCCCCCCCEEEECEEEE
T ss_conf 9999999998887459972126779999999981876223-536--8762575565898763643589997888880898
Q ss_pred EEEEEEE-EEECCC
Q ss_conf 9787665-300023
Q gi|254780899|r 103 VDVTYVV-NGWHGD 115 (273)
Q Consensus 103 iD~g~~~-~GY~~D 115 (273)
||..... .|+..+
T Consensus 186 IEP~~s~G~g~v~~ 199 (295)
T 1xgs_A 186 IEPFATIGAGQVIE 199 (295)
T ss_dssp ECCEEESSCSCEEE
T ss_pred EEEEEECCCCEEEE
T ss_conf 74068648980787
No 28
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii OT3} PDB: 2how_A
Probab=96.15 E-value=0.039 Score=33.08 Aligned_cols=80 Identities=8% Similarity=-0.015 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCE
Q ss_conf 03677877654322110011212210489999999862960104752123322113540365315645456645116737
Q gi|254780899|r 130 ERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMV 209 (273)
Q Consensus 130 ~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV 209 (273)
++..+++..++.++++.++||.+-.||...++......+..... ..-.+.|-.- ..+| ..+.+..+++|-+
T Consensus 141 r~A~~i~~~~~~~~~~~i~~G~tE~ei~~~~~~~~~~~~~~~~~-~~i~~~g~~~----~~~h----~~~~~r~~~~Gd~ 211 (356)
T 1wn1_A 141 EHASRIADKVFEEILTWDLIGMKERELALKIELLIRELSDGIAF-EPIVASGENA----ANPH----HEPGERKIRKGDI 211 (356)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHHHSSEESS-CCEEEEGGGG----GCTT----CCCCSCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCC----CCCE----ECCCCCCCCCCCE
T ss_conf 99999899999999999763996999988898765403333456-7511467863----1000----0143553337975
Q ss_pred EEECCEEEC
Q ss_conf 883111443
Q gi|254780899|r 210 FTIEPMLNV 218 (273)
Q Consensus 210 ~aiEP~i~~ 218 (273)
+.++.+...
T Consensus 212 v~id~g~~~ 220 (356)
T 1wn1_A 212 IILDYGARW 220 (356)
T ss_dssp EEEEECEEE
T ss_pred EEEEEEECC
T ss_conf 799874012
No 29
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=96.15 E-value=0.046 Score=32.62 Aligned_cols=85 Identities=7% Similarity=-0.088 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEECCC--CCCCCCCCCCCCCCEEEECCCCCCCCCCEECCC
Q ss_conf 036778776543221100112122104899999998629601047--521233221135403653156454566451167
Q gi|254780899|r 130 ERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEV--FCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEG 207 (273)
Q Consensus 130 ~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~~~~~--~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~G 207 (273)
++..+++..++.++.+.++||++-.|+..++.+.+.+.|...+.. .+..++.....+....+| ....+.++++|
T Consensus 167 r~A~~i~~~a~~~~~~~~~~G~tE~ev~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~~~~~i~~G 242 (402)
T 1kp0_A 167 RZGARISDIGGAATAAAISAGVPEYEVAIATTBAMVRZIARBFPYVELMDTWIWFQSGINTDGAH----NPVTBRVVZRG 242 (402)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHSSSCEEEEEEEEEEEGGGGGSTT----CCEECCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCC----CCCCCEEECCC
T ss_conf 99789999999999998406884779999999999985465788654347653110366656554----68873154188
Q ss_pred CEEEECCEEEC
Q ss_conf 37883111443
Q gi|254780899|r 208 MVFTIEPMLNV 218 (273)
Q Consensus 208 MV~aiEP~i~~ 218 (273)
.++-++-+...
T Consensus 243 d~v~iD~g~~~ 253 (402)
T 1kp0_A 243 DILSLNCFPMI 253 (402)
T ss_dssp CEEEEEEEEEE
T ss_pred CEEEEECCCCE
T ss_conf 37998356405
No 30
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=96.14 E-value=0.049 Score=32.44 Aligned_cols=82 Identities=10% Similarity=0.062 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCE
Q ss_conf 03677877654322110011212210489999999862960104752123322113540365315645456645116737
Q gi|254780899|r 130 ERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMV 209 (273)
Q Consensus 130 ~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV 209 (273)
++..+++..++.++++.++||.+-.|+...+...+.+.|.........=.-|-+ +... .....+..+++|.+
T Consensus 143 r~A~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~~~~~~v~~g~~----~~~~----~~~~~~~~~~~gd~ 214 (359)
T 2zsg_A 143 KQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGAEGVAFDTIVASGCR----SALP----HGKASDKVVERGDV 214 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHHHTTCSEESSCCEEEEGGG----GGST----TCCCCSCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCC----CCCC----CCCCCCCEECCCCE
T ss_conf 999999999999988752378857787766666777517642246614314677----4444----35544432013666
Q ss_pred EEECCEEECC
Q ss_conf 8831114437
Q gi|254780899|r 210 FTIEPMLNVG 219 (273)
Q Consensus 210 ~aiEP~i~~~ 219 (273)
+.++.+....
T Consensus 215 v~~d~g~~~~ 224 (359)
T 2zsg_A 215 IVIDFGATYE 224 (359)
T ss_dssp EEEEECEEET
T ss_pred EEEEECCCCC
T ss_conf 9994033038
No 31
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/proteomics initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii OT3} PDB: 1pv9_A
Probab=95.83 E-value=0.078 Score=31.08 Aligned_cols=82 Identities=9% Similarity=0.040 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCE
Q ss_conf 03677877654322110011212210489999999862960104752123322113540365315645456645116737
Q gi|254780899|r 130 ERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMV 209 (273)
Q Consensus 130 ~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV 209 (273)
++..+++..++.++++.++||.+-.++...+.....+.|.........-.-|.. ..+++ ....+..+++|.+
T Consensus 137 r~a~~i~~~~~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~----~~~~~~~l~~gd~ 208 (351)
T 1wy2_A 137 EKACEIADKAVMAAIEEITEGKKEREVAAKVEYLMKMNGAEKPAFDTIIASGYR----SALPH----GVASDKRIERGDL 208 (351)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCSEESSCCEEEEGGG----GGSTT----CBCCSCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCEEECCCC----CCCCC----CCCCCCCCCCCCE
T ss_conf 999988889888777641578343113333334442057631257840304677----54532----3466540238998
Q ss_pred EEECCEEECC
Q ss_conf 8831114437
Q gi|254780899|r 210 FTIEPMLNVG 219 (273)
Q Consensus 210 ~aiEP~i~~~ 219 (273)
+.++-+....
T Consensus 209 v~id~g~~~~ 218 (351)
T 1wy2_A 209 VVIDLGALYQ 218 (351)
T ss_dssp EEEEECEEET
T ss_pred EEEEECCCCC
T ss_conf 9999567358
No 32
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H3/H4 chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=95.71 E-value=0.12 Score=29.78 Aligned_cols=20 Identities=10% Similarity=-0.132 Sum_probs=13.1
Q ss_pred CCCCEECCCCEEEECCEEEC
Q ss_conf 56645116737883111443
Q gi|254780899|r 199 PSVGTFQEGMVFTIEPMLNV 218 (273)
Q Consensus 199 ~~~~~le~GMV~aiEP~i~~ 218 (273)
..+..++.|-++.++-+...
T Consensus 270 ~s~~~~~~gd~vlid~G~~y 289 (444)
T 3cb6_A 270 ITDDRNLHGDVVLCSLGFRY 289 (444)
T ss_dssp CCCSSBCCSSEEEEEECEEE
T ss_pred CCCCCCCCCCEEEEEEEECC
T ss_conf 99872135887999981310
No 33
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=95.62 E-value=0.13 Score=29.69 Aligned_cols=78 Identities=6% Similarity=-0.034 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEC--------CCCCCCCCCCCCCCCCEEEECCCCCCCCCC
Q ss_conf 367787765432211001121221048999999986296010--------475212332211354036531564545664
Q gi|254780899|r 131 RILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVV--------EVFCGHGIGKSFHEKPEILHFYDPLYPSVG 202 (273)
Q Consensus 131 ~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~~~--------~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~ 202 (273)
+..+++..++.++++.++||++-.|+..++.....+.|.... ...+++|..-. .+| ....+.
T Consensus 168 ~A~~i~~~a~~~~~~~i~~G~te~ei~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~------~~h----~~~~~~ 237 (401)
T 1chm_A 168 HGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFEDVELMDTWTWFQSGINTD------GAH----NPVTTR 237 (401)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHCSSCCBCCCEEEEEEGGGGG------STT----CCEESC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC------CCC----CCCCCC
T ss_conf 9899999999999999871897899999999999884212334334456554135667754------554----442224
Q ss_pred EECCCCEEEECCEEEC
Q ss_conf 5116737883111443
Q gi|254780899|r 203 TFQEGMVFTIEPMLNV 218 (273)
Q Consensus 203 ~le~GMV~aiEP~i~~ 218 (273)
++++|.++.|+.+...
T Consensus 238 ~i~~Gd~v~id~g~~~ 253 (401)
T 1chm_A 238 KVNKGDILSLNCFPMI 253 (401)
T ss_dssp BCCTTCEEEEEEECEE
T ss_pred CCCCCCEEEEECCEEE
T ss_conf 4669988999503068
No 34
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, structural genomics, center for structural genomics of infectious diseases; HET: SO4; 2.89A {Bacillus anthracis}
Probab=95.55 E-value=0.062 Score=31.72 Aligned_cols=81 Identities=14% Similarity=0.131 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCCCEE
Q ss_conf 36778776543221100112122104899999998629601047521233221135403653156454566451167378
Q gi|254780899|r 131 RILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVF 210 (273)
Q Consensus 131 ~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~GMV~ 210 (273)
+..+.+..++.++++.++||++-.|+.+.+...+.+.|........--+.|-. ..++|+ ...+.++++|.++
T Consensus 182 ~a~~i~~~~~~~~~~~~~~G~te~e~~a~~~~~~~~~g~~~~~~~~~~~~g~~----~~~~h~----~~~~~~i~~gd~v 253 (427)
T 3ig4_A 182 EAIAVTKDGIYNVLKHAKADMMEYELEAQFDFTLKSSGIKHHAFNTILASGKN----ATVLHY----EDNDAQIQNGDLV 253 (427)
T ss_dssp HHHHHHHHHHHHHHHHCCSSEEHHHHHHHHHHHHHHTTCCEESSCCEEEEGGG----GGSTTC----CCCCSEECTTCEE
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC----CCCCCC----CCCCCCCCCCCEE
T ss_conf 99999999999976515789848999999866787439855665653124788----756535----8887615799889
Q ss_pred EECCEEECC
Q ss_conf 831114437
Q gi|254780899|r 211 TIEPMLNVG 219 (273)
Q Consensus 211 aiEP~i~~~ 219 (273)
.++.+....
T Consensus 254 ~~d~g~~~~ 262 (427)
T 3ig4_A 254 LLDLGAQKD 262 (427)
T ss_dssp EEEECEEET
T ss_pred EEEECCCCC
T ss_conf 998334324
No 35
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=95.48 E-value=0.045 Score=32.66 Aligned_cols=83 Identities=13% Similarity=0.180 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCC-CCCCCCCC
Q ss_conf 9999999999999999757998899999999999998598303443324445532344642111----212-22200134
Q gi|254780899|r 24 RSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVICH----GIP-SNKQLREG 98 (273)
Q Consensus 24 R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~~H----~~p-~d~~l~~G 98 (273)
|+..+++.++++++.+.+|||++..|+...+++.+.+.|-.. +..+ +.+.+...+.. .|. ..+ ++.+|++|
T Consensus 124 ~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~g~~~-~~~~--~GHgiGl~~he-~P~i~~~~~~~~~~~L~~G 199 (262)
T 3mx6_A 124 KRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNYSV-VRDY--TGHGIGRVFHD-KPSILNYGRNGTGLTLKEG 199 (262)
T ss_dssp HHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHTTCEE-CCSC--CEEECSSSSSE-EEEECSSCCTTCSCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC-CCCC--CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCC
T ss_conf 999999999999999971398999999999999999868942-8998--62878886068-9865777768999783489
Q ss_pred EEEEEEEEEEEE
Q ss_conf 057997876653
Q gi|254780899|r 99 DIVNVDVTYVVN 110 (273)
Q Consensus 99 D~v~iD~g~~~~ 110 (273)
.++.++.+....
T Consensus 200 mV~~iEp~~~~~ 211 (262)
T 3mx6_A 200 MFFTVEPMINAG 211 (262)
T ss_dssp CEEEECCEEESS
T ss_pred CEEEEEEEEECC
T ss_conf 789986347617
No 36
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=94.98 E-value=0.079 Score=31.03 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC----CC-CCCCCCCCC
Q ss_conf 9999999999999999757998899999999999998598303443324445532344642111----21-222200134
Q gi|254780899|r 24 RSACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNAIPATLNYRGYKKSCCTSINHVICH----GI-PSNKQLREG 98 (273)
Q Consensus 24 R~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~~~~~~~~~~f~~~~~~s~N~~~~H----~~-p~d~~l~~G 98 (273)
++..+.+.++++++.+.+|||++..|+...+++.+.+.|... +..+. .+.+..+... .|+ +. ..+.+|++|
T Consensus 122 ~~~~~~~~~a~~~~~~~ikpG~~~~dv~~a~~~~~~~~g~~~-~~~~~--GHgiG~~~he-~p~~~~~~~~~~~~~L~~g 197 (263)
T 2gg2_A 122 ERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSV-VREYC--GHGIGRGFHE-EPQVLHYDSRETNVVLKPG 197 (263)
T ss_dssp HHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTTCEE-CSSCC--EEECSSSSSE-EEEECSSCCTTCCCBCCTT
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC-CCCCC--CCCCCCCCCC-CCCCCCCCCCCCCEECCCC
T ss_conf 144589999999999884389918999999999999849943-67740--1687873358-9743544354320134799
Q ss_pred EEEEEEEEEEE
Q ss_conf 05799787665
Q gi|254780899|r 99 DIVNVDVTYVV 109 (273)
Q Consensus 99 D~v~iD~g~~~ 109 (273)
.++.++.+...
T Consensus 198 mv~~iEp~~~~ 208 (263)
T 2gg2_A 198 MTFTIEPMVNA 208 (263)
T ss_dssp CEEEECCEEES
T ss_pred CEEEEECCEEC
T ss_conf 88998484761
No 37
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=94.84 E-value=0.2 Score=28.40 Aligned_cols=39 Identities=15% Similarity=0.216 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999999757998899999999999998598
Q gi|254780899|r 25 SACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNA 63 (273)
Q Consensus 25 ~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~ 63 (273)
++-..+.++++++.+.+|||++..|+...+++.+.+.|-
T Consensus 134 ~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~ 172 (262)
T 1o0x_A 134 ELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGF 172 (262)
T ss_dssp HHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 999999999999998747998999999999999998299
No 38
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, activator, chromosomal protein, coiled coil, DNA damage; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=94.75 E-value=0.24 Score=27.85 Aligned_cols=89 Identities=3% Similarity=-0.141 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCC------CCHHHHHHHHHHHHCCCE-----EC--CCCCCCCCCCC---CCCCCEEEECC
Q ss_conf 3677877654322110011212------210489999999862960-----10--47521233221---13540365315
Q gi|254780899|r 131 RILQVTYESLYKGIAAVKLNAN------IEDIGKAIQRYAHSERYS-----VV--EVFCGHGIGKS---FHEKPEILHFY 194 (273)
Q Consensus 131 ~l~~~~~~a~~~~i~~ikpG~~------~~ei~~a~~~~~~~~g~~-----~~--~~~~GHgiGl~---~hE~P~i~~~~ 194 (273)
+..+++..++.++++.++||.. -.++.+.+...+...++. .. ....+..+... .-=.|.+....
T Consensus 188 ~A~~i~~~~~~~~~~~i~~gi~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~IvasG~ 267 (467)
T 3biq_A 188 VSSKGSDKFMDLLSNEMVRAVDEELKITNAKLSDKIENKIDDVKFLKQLSPDLSALCPPNYKFNFDLLDWTYSPIIQSGK 267 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTSCTTCCCCGGGEEESSCCEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999999876555435566469999999999998632332023011002343222367877766575115677
Q ss_pred C----C-CCCCCCEECCCCEEEECCEEECC
Q ss_conf 6----4-54566451167378831114437
Q gi|254780899|r 195 D----P-LYPSVGTFQEGMVFTIEPMLNVG 219 (273)
Q Consensus 195 ~----~-~~~~~~~le~GMV~aiEP~i~~~ 219 (273)
. + ....+..|++|.++-++-+....
T Consensus 268 n~~~~~h~~~~~~~l~~gd~vlvD~G~~y~ 297 (467)
T 3biq_A 268 KFDLRVSARSTNDQLYGNGCILASCGIRYN 297 (467)
T ss_dssp CCCCSTTCCCCSSBCCCSEEEEEEECEEET
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECEEEC
T ss_conf 656567768998632459989998355999
No 39
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidase P, manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=94.48 E-value=0.25 Score=27.74 Aligned_cols=80 Identities=13% Similarity=0.125 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEC--CCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECCC
Q ss_conf 0367787765432211001121221048999999986296010--47521233221135403653156454566451167
Q gi|254780899|r 130 ERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVV--EVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQEG 207 (273)
Q Consensus 130 ~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~~~--~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~G 207 (273)
++..+++..++.++.+.++||++-.+|.+.+...+.+.|-... ....+ .|-. ..++|+ ...+.++++|
T Consensus 185 r~a~~i~~~~~~~~~~~~~~G~tE~ei~a~~~~~~~~~g~~~~~~~~i~~--~g~~----~~~~h~----~~~~~~~~~g 254 (440)
T 2v3z_A 185 RRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVG--SGEN----GCILHY----TENECEMRDG 254 (440)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCCEESSCCEEE--EGGG----GGSTTC----CCCCSBCCTT
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEC--CCCC----CCCCCC----CCCCCCCCCC
T ss_conf 99999999999988876468988999999999999984311246785542--6886----554224----6773314489
Q ss_pred CEEEECCEEECC
Q ss_conf 378831114437
Q gi|254780899|r 208 MVFTIEPMLNVG 219 (273)
Q Consensus 208 MV~aiEP~i~~~ 219 (273)
.++.++.+....
T Consensus 255 d~v~~D~g~~~~ 266 (440)
T 2v3z_A 255 DLVLIDAGCEYK 266 (440)
T ss_dssp CEEEEEECEEET
T ss_pred CEEEEEEEEEEC
T ss_conf 879998124999
No 40
>3iu7_A Methionine aminopeptidase; enzyme-inhibitor complex, cobalt, hydrolase, metal-binding, protease; HET: FCD; 1.40A {Mycobacterium tuberculosis} PDB: 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A
Probab=94.41 E-value=0.28 Score=27.34 Aligned_cols=86 Identities=13% Similarity=0.158 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEECCC-CCCCCCC-CCCCCCCEEEECCCCCCCCCCEECC
Q ss_conf 1036778776543221100112122104899999998629601047-5212332-2113540365315645456645116
Q gi|254780899|r 129 AERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEV-FCGHGIG-KSFHEKPEILHFYDPLYPSVGTFQE 206 (273)
Q Consensus 129 ~~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~~~~~-~~GHgiG-l~~hE~P~i~~~~~~~~~~~~~le~ 206 (273)
.++..+++.+++.++++.+|||.+-.||..+++..+.+.|...... ..+.... ...+.. ..++ ....+..+++
T Consensus 53 mR~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~ 127 (288)
T 3iu7_A 53 MRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNE-VICH----GIPDSTVITD 127 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTTGGGCCSSEEEEETT-EEEC----CCCSSCBCCT
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE-EECC----CCCCCCCCCC
T ss_conf 9999999999999999877589999999999999999869966545656887520034532-6337----8998734256
Q ss_pred CCEEEECCEEECC
Q ss_conf 7378831114437
Q gi|254780899|r 207 GMVFTIEPMLNVG 219 (273)
Q Consensus 207 GMV~aiEP~i~~~ 219 (273)
|.++.++-+....
T Consensus 128 Gd~v~vD~g~~~~ 140 (288)
T 3iu7_A 128 GDIVNIDVTAYIG 140 (288)
T ss_dssp TCEEEEEEEEEET
T ss_pred CCEEEEEEEEEEC
T ss_conf 6679985115899
No 41
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=93.11 E-value=0.42 Score=26.21 Aligned_cols=39 Identities=23% Similarity=0.423 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999999757998899999999999998598
Q gi|254780899|r 25 SACNVVARCLDSLTPIIKPGTTTEEIDDFVLKFGMENNA 63 (273)
Q Consensus 25 ~A~~i~~~~~~~~~~~i~~G~se~el~~~~~~~~~~~g~ 63 (273)
++.+.+.++.+++.+.+|||++..++...++....+.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~kpG~~~~~v~~~~~~~~~~~~~ 159 (252)
T 1qxy_A 121 KVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDL 159 (252)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 899999999999998727998442689999999985387
No 42
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, acetylation, peptidase D, polymorphism, collagen degradation, metalloaminopeptidase; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=91.47 E-value=0.29 Score=27.22 Aligned_cols=84 Identities=18% Similarity=0.207 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCE---ECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEECC
Q ss_conf 03677877654322110011212210489999999862960---104752123322113540365315645456645116
Q gi|254780899|r 130 ERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYS---VVEVFCGHGIGKSFHEKPEILHFYDPLYPSVGTFQE 206 (273)
Q Consensus 130 ~~l~~~~~~a~~~~i~~ikpG~~~~ei~~a~~~~~~~~g~~---~~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~~~le~ 206 (273)
++..+++.+++.++++.+|||++-.||.+.++..+.+.|-. .+...++ .|.+ ..++|+......++.++++
T Consensus 197 r~A~~i~~~a~~~~~~~~~~G~~E~ei~~~~~~~~~~~g~~~~~~~~~iv~--~g~n----~~~~H~~~~~~~~~~~l~~ 270 (494)
T 2iw2_A 197 RYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRGGMRHSSYTCICG--SGEN----SAVLHYGHAGAPNDRTIQN 270 (494)
T ss_dssp HHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHCCCEESSCCEEE--EGGG----GGCSSCSSTTSCSCCBCCT
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC--CCCC----CCCCCCCCCCCCCCCCCCC
T ss_conf 999999999999988744689989999998888987427877677665554--4656----5443334545788643348
Q ss_pred CCEEEECCEEECC
Q ss_conf 7378831114437
Q gi|254780899|r 207 GMVFTIEPMLNVG 219 (273)
Q Consensus 207 GMV~aiEP~i~~~ 219 (273)
|..+.++-+....
T Consensus 271 Gd~vl~D~g~~~~ 283 (494)
T 2iw2_A 271 GDMCLFDMGGEYY 283 (494)
T ss_dssp TCEEEEEECEEBT
T ss_pred CCEEEEEECCCCC
T ss_conf 9868875322248
No 43
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=51.85 E-value=6.8 Score=18.13 Aligned_cols=23 Identities=39% Similarity=0.560 Sum_probs=19.3
Q ss_pred CCCCCCCCEEEEEEEEEEEEEEC
Q ss_conf 22200134057997876653000
Q gi|254780899|r 91 SNKQLREGDIVNVDVTYVVNGWH 113 (273)
Q Consensus 91 ~d~~l~~GD~v~iD~g~~~~GY~ 113 (273)
.||++++||.|.||+-+.++|-.
T Consensus 26 ~dr~~~~GD~V~id~~~~~dG~~ 48 (113)
T 1hxv_A 26 SDKKLANGDIAIIDFTGIVDNKK 48 (113)
T ss_dssp ---CCCSSEEEEEEEEEEETTEE
T ss_pred CCCCCCCCCEEEEEEEEEECCEE
T ss_conf 76556899999999999999999
No 44
>1iwp_G Glycerol dehydratase gamma subunit; cobalamin, radical catalysis, lyase; HET: B12; 2.10A {Klebsiella pneumoniae} SCOP: a.23.2.1 PDB: 1mmf_G*
Probab=35.10 E-value=20 Score=14.98 Aligned_cols=43 Identities=14% Similarity=0.219 Sum_probs=24.7
Q ss_pred HHHHHHHHHH---HHHHHHHHHHCCCCCCHH-HHHHHHHHHHHHCCC
Q ss_conf 9999999999---999999999757998899-999999999998598
Q gi|254780899|r 21 ENIRSACNVV---ARCLDSLTPIIKPGTTTE-EIDDFVLKFGMENNA 63 (273)
Q Consensus 21 ~~~R~A~~i~---~~~~~~~~~~i~~G~se~-el~~~~~~~~~~~g~ 63 (273)
..+|+|++++ +.-+-++.+.+||+.|+. ||.+.+.+...+.++
T Consensus 71 ~NfrRAAELt~vPD~rvLeiYnaLRP~RStk~ELl~iA~eLe~~Y~A 117 (141)
T 1iwp_G 71 RNFRRAAELIAIPDERILAIYNALRPFRSSQAELLAIADELEHTWHA 117 (141)
T ss_dssp HHHHHHHTTTTSCHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 98999886106986999999996388845199999999999998597
No 45
>1eex_G Propanediol dehydratase; coenzyme B12, potassium ION, TIM barrel, lyase; HET: COY; 1.70A {Klebsiella oxytoca} SCOP: a.23.2.1 PDB: 1dio_G* 1egm_G* 1egv_G* 1iwb_G* 1uc4_G* 1uc5_G*
Probab=33.67 E-value=21 Score=14.83 Aligned_cols=25 Identities=8% Similarity=0.030 Sum_probs=12.8
Q ss_pred HCCCCCCCC-CHHHHHHHHHHHHCCC
Q ss_conf 100112122-1048999999986296
Q gi|254780899|r 145 AAVKLNANI-EDIGKAIQRYAHSERY 169 (273)
Q Consensus 145 ~~ikpG~~~-~ei~~a~~~~~~~~g~ 169 (273)
.++||+... .|+.+.+++.-.+++-
T Consensus 124 naLRP~RStk~ELl~iA~eLe~~Y~A 149 (173)
T 1eex_G 124 NALRPYRSTKEELLAIADDLESRYQA 149 (173)
T ss_dssp HHHSTTSCCHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 86388845199999999999988587
No 46
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus HB8} PDB: 2flf_A
Probab=33.33 E-value=10 Score=16.97 Aligned_cols=13 Identities=23% Similarity=0.470 Sum_probs=10.2
Q ss_pred CCCCCCEEEEEEE
Q ss_conf 2001340579978
Q gi|254780899|r 93 KQLREGDIVNVDV 105 (273)
Q Consensus 93 ~~l~~GD~v~iD~ 105 (273)
..+++.|++.+|+
T Consensus 47 ~~l~~~div~vd~ 59 (200)
T 2fk5_A 47 ARLTPEDLLEVPL 59 (200)
T ss_dssp GGCCGGGEEEEES
T ss_pred HHCCHHHCEEECC
T ss_conf 6699989042256
No 47
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=31.45 E-value=15 Score=15.87 Aligned_cols=15 Identities=33% Similarity=0.361 Sum_probs=11.1
Q ss_pred CCCCCCEEEEEEEEE
Q ss_conf 200134057997876
Q gi|254780899|r 93 KQLREGDIVNVDVTY 107 (273)
Q Consensus 93 ~~l~~GD~v~iD~g~ 107 (273)
..+++.|++.+|.-+
T Consensus 48 ~~l~~~di~~v~~~g 62 (215)
T 1e4c_P 48 EKLTESHIVFIDGNG 62 (215)
T ss_dssp GGCCGGGCEEECTTC
T ss_pred HHCCHHHEEEECCCC
T ss_conf 779898905323467
No 48
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=26.20 E-value=28 Score=14.03 Aligned_cols=20 Identities=20% Similarity=0.120 Sum_probs=16.4
Q ss_pred CCCCCEECCCCEEEECCEEE
Q ss_conf 45664511673788311144
Q gi|254780899|r 198 YPSVGTFQEGMVFTIEPMLN 217 (273)
Q Consensus 198 ~~~~~~le~GMV~aiEP~i~ 217 (273)
.+...+|.||..++|+|+++
T Consensus 170 ~G~~l~L~PGesiTI~Pg~~ 189 (246)
T 3kmh_A 170 AGSQLRLSPGESICLPPGLY 189 (246)
T ss_dssp TTCEEEECTTCEEEECTTEE
T ss_pred CCCEEEECCCCEEECCCCCE
T ss_conf 99779878999698079980
Done!