RPSBLAST alignment of GI: 254780899 and protein with PDBid: 3cb6

>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H3/H4 chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A Length = 444
 Score =  166 bits (422), Expect = 4e-42
 Identities = 47/271 (17%), Positives = 86/271 (31%), Gaps = 33/271 (12%)

Query: 14  IYTPEELENIRSACNVVARCL-----DSLTPIIKPGT--TTEEIDDFVLKF--------- 57
           I   +EL NI+ A  V    +     D L+  I  G   T  +  D +            
Sbjct: 177 IKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFFQT 236

Query: 58  -GMENNAIPATLNYRGYKKSCCTSINHVICHGIPSNKQLREGDIVNVDVTYVVNGWHGDS 116
             ++   I        Y     +  ++ +     ++ +   GD+V   + +    +  + 
Sbjct: 237 KSLKLGDIDLDQLEWCYTPIIQSGGSYDLKPSAITDDRNLHGDVVLCSLGFRYKSYCSNV 296

Query: 117 SRMYPVGKIKRAAERILQVTYESLYKGIAAVKLNANIEDIGKAIQRYAHSERYSVVEVF- 175
            R Y         ++          K     +  A I DI   I     ++R  +   F 
Sbjct: 297 GRTYLFDPDSE-QQKNYSFLVALQKKLFEYCRDGAVIGDIYTKILGLIRAKRPDLEPNFV 355

Query: 176 --CGHGIGKSFHEKPEILHFYDPLYPSVGTFQEGMVFTIEPMLNVGGSSAKVLSDGWTAV 233
              G GIG  F E   +++  +P        Q GM   +             L +     
Sbjct: 356 RNLGAGIGIEFRESSLLVNAKNP-----RVLQAGMTLNLSIGFG-------NLINPHPKN 403

Query: 234 TRDRSLSAQYEHTIGITKAGCEIFTLSPNNL 264
           ++ +  +     TI IT++   +FT SP   
Sbjct: 404 SQSKEYALLLIDTIQITRSDPIVFTDSPKAQ 434