HHsearch alignment for GI: 254780900 and conserved domain: COG0743
>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism].
Probab=98.49 E-value=9.8e-07 Score=67.30 Aligned_cols=137 Identities=22% Similarity=0.263 Sum_probs=99.2
Q ss_pred CEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE-CCCCCC----CCCCCCC------------------C
Q ss_conf 26999982-5667899999999989999997399659999982-685200----2788771------------------0
Q gi|254780900|r 4 VLKVGVAG-LGTVGSALIRSIQKREGRFKDLDQHSFVVSAISA-RDKNID----RGIDCLR------------------Y 59 (438)
Q Consensus 4 ~ikIgiiG-~G~VG~~~~~~l~~~~~~l~~~~g~~i~i~~i~~-r~~~k~----~~~~~~~------------------~ 59 (438)
T Consensus 1 ~k~i~iLGSTGSIG~qtLdVi~~~p~~--------f~vval~ag~n~~~l~~q~~~f~P~~v~~~d~~~~~~l~~~~~~~ 72 (385)
T COG0743 1 MKKLTILGSTGSIGTQTLDVIRRNPDK--------FEVVALAAGKNVELLAEQIREFKPKYVVIADESAAKELEDLLPGT 72 (385)
T ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCC--------EEEEEEECCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCC
T ss_conf 945999716873428899999968985--------799997348749999999998498458855767799987531476
Q ss_pred HH---CCCHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 22---078889844889989998648888511357888863270288504177887689999875313966996056453
Q gi|254780900|r 60 EW---FDDPLIMAGEADIDVFVELIGGEDYPAYDAVRIALMRGCHVVTANKALIASHGKDLALLAQKNNAILNFEAAVAG 136 (438)
Q Consensus 60 ~~---~~d~~~li~~~~IDvVVEliGg~~~pA~~~i~~AL~~GkhVVTANKallA~~g~eL~~lA~~~gv~l~~easV~g 136 (438)
T Consensus 73 ~v~~G~~~l~e~a~~~~~d~Vm~AivG~aG--L~pTlaAi~aGK~iaLANKEsLV~aG~l~~~~~k~~g~~ll------- 143 (385)
T COG0743 73 EVLVGEEGLCELAAEDDADVVMNAIVGAAG--LLPTLAAIKAGKTIALANKESLVTAGELVMDAAKESGAQLL------- 143 (385)
T ss_pred EEEECHHHHHHHHHCCCCCEEEEHHHHHCC--CHHHHHHHHCCCCEEECCHHHHHCCHHHHHHHHHHCCCEEE-------
T ss_conf 586437789999846777877420310121--37799999828812434533531250999999997398770-------
Q ss_pred HHHH---HHHHHHHHHCCCCEEEEEE
Q ss_conf 0131---8999876412862034333
Q gi|254780900|r 137 GIPI---IRILKNYVEYDEINRVYGI 159 (438)
Q Consensus 137 giPi---i~~l~~~l~~~~i~~i~GI 159 (438)
T Consensus 144 --PVDSEH~AifQ~L~~~~~~~v~~i 167 (385)
T COG0743 144 --PVDSEHNAIFQCLQGETQKGVKKI 167 (385)
T ss_pred --CCCCHHHHHHHHCCCCCCCCEEEE
T ss_conf --558357899987376556760179