HHsearch alignment for GI: 254780900 and conserved domain: COG2844
>COG2844 GlnD UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, chaperones].
Probab=95.21 E-value=0.29 Score=28.84 Aligned_cols=100 Identities=11% Similarity=0.176 Sum_probs=59.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCH--HHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEE
Q ss_conf 610206889999997417777-655666678310023443885--34465327999924888748999999886699578
Q gi|254780900|r 306 SATASAVLGDICSIAKTNTQK-SVSWALGKESSSFSVIHCDGV--YEEEKEYFIRLTIRNFEGILDKITSQMSDFNISLR 382 (438)
Q Consensus 306 ~~TAsaV~sDli~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~yYLRl~v~DkpGVLa~It~ilak~~ISIe 382 (438)
T Consensus 741 ~dr~~~~~~~l~~~l~s~~~~~~~~~r~~r~~~~f~i~p~v~i~~t~~~~~t~lEv~alDRpGLLa~v~~v~~dl~l~i~ 820 (867)
T COG2844 741 EDRRAALRGELIEALLSGKAQPPRRRRIPRKLRHFPIPPRVTILPTASNDKTVLEVRALDRPGLLAALAGVFADLGLSLH 820 (867)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEE
T ss_conf 25788889999999856887876445667655411478812546565777448999967865379999999874556401
Q ss_pred EEEECCCCCCCCEEEEEEEEEECCH
Q ss_conf 8882267787761359999210488
Q gi|254780900|r 383 LFSCPHQEENSQEFSVFMITHKVSG 407 (438)
Q Consensus 383 si~Q~~~~~~~~~~~IViiTh~~~e 407 (438)
T Consensus 821 ~AkItT~--GErveD~F~vt~~~~~ 843 (867)
T COG2844 821 SAKITTF--GERVEDVFIVTDADGQ 843 (867)
T ss_pred EEEECCC--CCCCEEEEEEECCCCC
T ss_conf 3253034--6531258999635555