HHsearch alignment for GI: 254780900 and conserved domain: PRK05447
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.
Probab=98.69 E-value=3.1e-07 Score=70.84 Aligned_cols=130 Identities=20% Similarity=0.233 Sum_probs=93.9
Q ss_pred CEEEEEEC-CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC-CCC----CCCCCCCC-----------------CH
Q ss_conf 26999982-566789999999998999999739965999998268-520----02788771-----------------02
Q gi|254780900|r 4 VLKVGVAG-LGTVGSALIRSIQKREGRFKDLDQHSFVVSAISARD-KNI----DRGIDCLR-----------------YE 60 (438)
Q Consensus 4 ~ikIgiiG-~G~VG~~~~~~l~~~~~~l~~~~g~~i~i~~i~~r~-~~k----~~~~~~~~-----------------~~ 60 (438)
T Consensus 1 mk~i~IlGsTGSIG~~tL~Vi~~~~~--------~f~v~~lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~~~~~~~~~ 72 (379)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRRHPD--------RFRVVALSAGSNVELLAEQIREFRPKYVVVADEAAAKELKAALAGK 72 (379)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC--------CCEEEEEEECCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCC
T ss_conf 97899985695888999999995868--------7589999928979999999999499999992889999998755882
Q ss_pred H---CCCHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCH
Q ss_conf 2---0788898448899899986488885113578888632702885041778876899998753139669960564530
Q gi|254780900|r 61 W---FDDPLIMAGEADIDVFVELIGGEDYPAYDAVRIALMRGCHVVTANKALIASHGKDLALLAQKNNAILNFEAAVAGG 137 (438)
Q Consensus 61 ~---~~d~~~li~~~~IDvVVEliGg~~~pA~~~i~~AL~~GkhVVTANKallA~~g~eL~~lA~~~gv~l~~easV~gg 137 (438)
T Consensus 73 ~~~g~~~l~~~~~~~~~D~vi~aisG~~--GL~pt~~ai~~gk~laLANKEsiV~~G~li~~~~k~~~~~Ii-------- 142 (379)
T PRK05447 73 VLAGEEGLCELAALPEADVVVAAIVGAA--GLLPTLAAIKAGKRIALANKESLVCAGELVMDAAKKSGAQIL-------- 142 (379)
T ss_pred EEECHHHHHHHHHCCCCCEEEEEHHHHH--HHHHHHHHHHCCCEEEEECCCHHEECHHHHHHHHHHCCCEEE--------
T ss_conf 8868899999973678999998134364--579999999739938984340310247999999986398686--------
Q ss_pred HHH---HHHHHHHHHCCC
Q ss_conf 131---899987641286
Q gi|254780900|r 138 IPI---IRILKNYVEYDE 152 (438)
Q Consensus 138 iPi---i~~l~~~l~~~~ 152 (438)
T Consensus 143 -PvDSEH~Aifq~l~~~~ 159 (379)
T PRK05447 143 -PVDSEHSAIFQCLPGEN 159 (379)
T ss_pred -ECCHHHHHHHHHHHCCC
T ss_conf -43608899999972675