HHsearch alignment for GI: 254780900 and conserved domain: PRK06270
>PRK06270 homoserine dehydrogenase; Provisional.
Probab=100.00 E-value=0 Score=699.32 Aligned_cols=316 Identities=37% Similarity=0.532 Sum_probs=292.9
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC--CCCCC----------------CCCCHHCCCH
Q ss_conf 26999982566789999999998999999739965999998268520--02788----------------7710220788
Q gi|254780900|r 4 VLKVGVAGLGTVGSALIRSIQKREGRFKDLDQHSFVVSAISARDKNI--DRGID----------------CLRYEWFDDP 65 (438)
Q Consensus 4 ~ikIgiiG~G~VG~~~~~~l~~~~~~l~~~~g~~i~i~~i~~r~~~k--~~~~~----------------~~~~~~~~d~ 65 (438)
T Consensus 2 ~i~I~l~G~G~VG~~~~~~l~~~~~~l~~~~g~~l~v~~i~~s~~~~~~~~gid~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T PRK06270 2 EMKIALVGFGGVGQGLAELLAMKNEYLKKEYGLDLKVVAIADSSGAAIDPNGLDLELALKVKEETGKLADYPEGGGEIDG 81 (342)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH
T ss_conf 63199987688999999999987999999849978999999165433576678989998766411650003200012789
Q ss_pred HHHHCCCCCCEEEECC----CCCCCCHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH
Q ss_conf 8984488998999864----888851135788886327028850417788768999987531396699605645301318
Q gi|254780900|r 66 LIMAGEADIDVFVELI----GGEDYPAYDAVRIALMRGCHVVTANKALIASHGKDLALLAQKNNAILNFEAAVAGGIPII 141 (438)
Q Consensus 66 ~~li~~~~IDvVVEli----Gg~~~pA~~~i~~AL~~GkhVVTANKallA~~g~eL~~lA~~~gv~l~~easV~ggiPii 141 (438)
T Consensus 82 ~~~~~~~~~dvvve~t~~~~~~~-e~a~~~~~~aL~~G~~VVTANK~~la~~~~eL~~lA~~~g~~~~yEasVggGlPiI 160 (342)
T PRK06270 82 LEVIKSAEADVLVEATPTNIETG-EPALSHCRKALERGKHVVTSNKGPLALAYKELKELAKENGVCFRYEATVGGAMPII 160 (342)
T ss_pred HHHHCCCCCCEEEEEECCCCCCC-HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCH
T ss_conf 99842779998999304467774-88999999999779949998871789889999999997298499854411153538
Q ss_pred HHHHHHHHCCCCEEEEEEECCCHHHHEEHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99987641286203433314200000000100687788998878761761565322321178999999999998188555
Q gi|254780900|r 142 RILKNYVEYDEINRVYGIINGTCNYILSHMNNLGLSFQDCLEEARRQGYAEGDATFDINGVDSSHKIAILSAIAFGIDTS 221 (438)
Q Consensus 142 ~~l~~~l~~~~i~~i~GIlnGT~nyIL~~m~~~g~~f~~al~~Aq~lGyaE~DP~~Di~G~Daa~Kl~ILa~~~~g~~~~ 221 (438)
T Consensus 161 ~~l~~~l~gd~I~~I~GIlnGT~nyIL~~m~~~g~~F~~alkeAq~lGyaE~DP~~Dl~G~Daa~Kl~ILa~~~~g~~~~ 240 (342)
T PRK06270 161 RLAKETLAGNDIKSIKGILNGTTNYILTRMEEEGLSYDQALKEAQELGYAEADPTYDVEGIDAALKVVILANSILGADLT 240 (342)
T ss_pred HHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 98985307888458998867715898888775599899999999973998899521016885789999999998099988
Q ss_pred CCCCHHHHHHHCCHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEEEEEC
Q ss_conf 31000122320476740347871985874101331367835699998641677300036654168983113100589726
Q gi|254780900|r 222 VEGVYCEGISNITLEDIRGAADFGYCIKFLAMARRKGKGIIRYVYPVLLKYDSVMALVDGITNAVVIETNGLGKLTMTGP 301 (438)
Q Consensus 222 ~~~v~~~gI~~i~~~di~~a~~~g~~ikli~~~~~~~~~i~~~V~P~li~~~~~la~v~g~~Nai~i~~~~~g~~~~~G~ 301 (438)
T Consensus 241 ~~dv~~~gI~~i~~~di~~A~~~G~~iklva~~~~~~~--~~~V~p~~v~~~~pla-v~g~~N~i~i~t~~~g~l~~~G~ 317 (342)
T PRK06270 241 LKDVEVTGITRITPEAIRLAAKEGYRIKLIGEVSREAD--KLSVSPRLVPIGHPLA-VSGTLNAATFETDLAGDVTVSGP 317 (342)
T ss_pred HHHCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCC--EEEEEEEEECCCCCEE-ECCCCEEEEEEEEECCCEEEEEC
T ss_conf 56503478565999999999987996999999997898--8999989988999324-78985799998451685899978
Q ss_pred CCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 8766610206889999997417
Q gi|254780900|r 302 GAGGSATASAVLGDICSIAKTN 323 (438)
Q Consensus 302 GAG~~~TAsaV~sDli~i~~~~ 323 (438)
T Consensus 318 GAG~~~TAsaVlsDll~ia~~~ 339 (342)
T PRK06270 318 GAGSIETASAILSDLIAIHDRG 339 (342)
T ss_pred CCCCHHHHHHHHHHHHHHHHCC
T ss_conf 9891460999999999998632