HHsearch alignment for GI: 254780900 and conserved domain: PRK11589

>PRK11589 gcvR glycine cleavage system transcriptional repressor; Provisional.
Probab=96.64  E-value=0.009  Score=39.48  Aligned_cols=39  Identities=3%  Similarity=0.228  Sum_probs=33.4

Q ss_pred             HCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             446532799992488874899999988669957888822
Q gi|254780900|r  349 EEEKEYFIRLTIRNFEGILDKITSQMSDFNISLRLFSCP  387 (438)
Q Consensus       349 ~~~~~yYLRl~v~DkpGVLa~It~ilak~~ISIesi~Q~  387 (438)
T Consensus        91 ~~~~~~~v~v~g~D~PGIV~~vt~~la~~~InI~~L~T~  129 (183)
T PRK11589         91 AMPATVWVQVEVADSPHLIERFTALFDSHHMNIAELVSR  129 (183)
T ss_pred             CCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHEEE
T ss_conf             778159999997898988999999999869987652221