HHsearch alignment for GI: 254780900 and conserved domain: TIGR00691
>TIGR00691 spoT_relA RelA/SpoT family protein; InterPro: IPR004811 The functions of Escherichia coli RelA and SpoT differ somewhat. RelA (2.7.6.5 from EC) produces pppGpp (or ppGpp) from ATP and GTP (or GDP). SpoT (3.1.7.2 from EC) degrades ppGpp, but may also act as a secondary ppGpp synthetase. The two proteins are strongly similar. In many species, a single homolog to SpoT and RelA appears responsible for both ppGpp synthesis and ppGpp degradation. (p)ppGpp is a regulatory metabolite of the stringent response, but appears also to be involved in antibiotic biosynthesis in some species. ; GO: 0015969 guanosine tetraphosphate metabolic process.
Probab=95.47 E-value=0.12 Score=31.61 Aligned_cols=77 Identities=13% Similarity=0.146 Sum_probs=63.2
Q ss_pred HHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCC
Q ss_conf 344653279999248887489999998866995788882267787761359999210488999999998623830004
Q gi|254780900|r 348 YEEEKEYFIRLTIRNFEGILDKITSQMSDFNISLRLFSCPHQEENSQEFSVFMITHKVSGKLIRDAIECFNGKSDAIR 425 (438)
Q Consensus 348 ~~~~~~yYLRl~v~DkpGVLa~It~ilak~~ISIesi~Q~~~~~~~~~~~IViiTh~~~e~~i~~ai~~i~~l~~v~~ 425 (438)
T Consensus 662 ~~~~f~~~I~~~~~~~~~~L~~l~~~i~~~~~ni~~~~~~~~K~-~~~~~~~~~~~~~~~~~L~~i~~~ik~~~~v~~ 738 (741)
T TIGR00691 662 KPQRFIVEIQIEALDRKGVLSDLTTAISENDSNIVSISTETKKD-KREAILNITVEIKDYKHLLKIMKKIKNVEDVID 738 (741)
T ss_pred CCCEEEEEEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCC-CCEEEEEEEEEECCHHHHHHHHHHHCCCCCEEE
T ss_conf 86405889899861034689999999863872589700100258-836899999986087999999998516887588