HHsearch alignment for GI: 254780900 and conserved domain: TIGR01127

>TIGR01127 ilvA_1Cterm threonine dehydratase; InterPro: IPR005789 Serine and threonine dehydratases , are functionally and structurally related pyridoxal-phosphate dependent enzymes. L-serine dehydratase () and D-serine dehydratase () catalyze the dehydratation of L-serine (respectively D-serine) into ammonia and pyruvate. Threonine dehydratase () (TDH) catalyzes the dehydratation of threonine into alpha-ketobutarate and ammonia. In Escherichia coli and other microorganisms, two classes of TDH are known to exist. One is involved in the biosynthesis of isoleucine, the other in hydroxamino acid catabolism. Threonine synthase () is also a pyridoxal-phosphate enzyme, it catalyzes the transformation of homoserine-phosphate into threonine. It has been shown that threonine synthase is distantly related to the serine/threonine dehydratases. In all these enzymes, the pyridoxal-phosphate group is attached to a lysine residue. A form of threonine dehydratase with two copies of the C-terminal domain is described by . This model describes a phylogenetically distinct which branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any domain. Many members of this model are found in species with other isoleucine biosynthetic enzymes.; GO: 0004794 L-threonine ammonia-lyase activity.
Probab=96.07  E-value=0.06  Score=33.69  Aligned_cols=283  Identities=16%  Similarity=0.152  Sum_probs=150.1

Q ss_pred             HCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCC-HHHHHHHHHH-HHHCCCCEEEEEEECCCHHHHEEHHHCC
Q ss_conf             3270288504177887689999875313966996056453-0131899987-6412862034333142000000001006
Q gi|254780900|r   97 MRGCHVVTANKALIASHGKDLALLAQKNNAILNFEAAVAG-GIPIIRILKN-YVEYDEINRVYGIINGTCNYILSHMNNL  174 (438)
Q Consensus        97 ~~GkhVVTANKallA~~g~eL~~lA~~~gv~l~~easV~g-giPii~~l~~-~l~~~~i~~i~GIlnGT~nyIL~~m~~~  174 (438)
T Consensus        46 ~~~~GVvaASAG---NHAQGVA~AA~~~Gi~---a~IVMPE~aP~~Kv~AT~~y-GAEV-----iL-------------~  100 (381)
T TIGR01127        46 QRKRGVVAASAG---NHAQGVALAAKVFGIK---AKIVMPEYAPLSKVKATKSY-GAEV-----IL-------------H  100 (381)
T ss_pred             HCCCCEEEECCC---CHHHHHHHHHHHCCCC---CEEECCCCCHHHHHHHHHHC-CCEE-----EE-------------C
T ss_conf             134755775045---4378999998761877---46878876735789997626-9618-----98-------------0


Q ss_pred             CCCHHHHHHHHH----HCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCCCCCC--CHHHH---HHHCCHHHHHHHH
Q ss_conf             877889988787----617615653223---21178999999999998188555310--00122---3204767403478
Q gi|254780900|r  175 GLSFQDCLEEAR----RQGYAEGDATFD---INGVDSSHKIAILSAIAFGIDTSVEG--VYCEG---ISNITLEDIRGAA  242 (438)
Q Consensus       175 g~~f~~al~~Aq----~lGyaE~DP~~D---i~G~Daa~Kl~ILa~~~~g~~~~~~~--v~~~g---I~~i~~~di~~a~  242 (438)
T Consensus       101 G~~~DEA~~~A~~~~~~~g~~fvHpF~D~~vmAGQGT------igLEi~ed~pd~D~viVPVGGGGLISGv~----~a~K  170 (381)
T TIGR01127       101 GADYDEAYALAEELAEEEGRVFVHPFDDEYVMAGQGT------IGLEIMEDLPDVDTVIVPVGGGGLISGVA----SAAK  170 (381)
T ss_pred             CCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCH------HHHHHHHCCCCCCEEEEEECCCCHHHHHH----HHHH
T ss_conf             8870789999999998609878740588778616748------99999964798137998417871287999----9998


Q ss_pred             HCCCEEEEEEEE----------------------EECCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEE-------
Q ss_conf             719858741013----------------------313678356999986416773000366541689831131-------
Q gi|254780900|r  243 DFGYCIKFLAMA----------------------RRKGKGIIRYVYPVLLKYDSVMALVDGITNAVVIETNGL-------  293 (438)
Q Consensus       243 ~~g~~ikli~~~----------------------~~~~~~i~~~V~P~li~~~~~la~v~g~~Nai~i~~~~~-------  293 (438)
T Consensus       171 ~~~P~VkvIGV~aE~ap~m~~Sl~~Gk~~~v~~~~tiADGIaVk~-p--G~lTF~i~-k~~VD~~V~V~eeEIA~A~~~L  246 (381)
T TIGR01127       171 KLNPEVKVIGVEAEGAPSMVESLREGKIKAVESVDTIADGIAVKK-P--GDLTFNIV-KEYVDEVVAVDEEEIAKAILLL  246 (381)
T ss_pred             HHCCCCEEEEEECCCCHHHHHHHHCCCEEEECCCCEEECCCEECC-C--CCCCHHHH-HHHCCCEEEECHHHHHHHHHHH
T ss_conf             728994799860278558999985199056045641415211637-8--87674789-9747970884737799999998


Q ss_pred             ---EEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEE--CCCCCHHH
Q ss_conf             ---0058972687666102068899999974177776556666783100234438853446532799992--48887489
Q gi|254780900|r  294 ---GKLTMTGPGAGGSATASAVLGDICSIAKTNTQKSVSWALGKESSSFSVIHCDGVYEEEKEYFIRLTI--RNFEGILD  368 (438)
Q Consensus       294 ---g~~~~~G~GAG~~~TAsaV~sDli~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yYLRl~v--~DkpGVLa  368 (438)
T Consensus       247 LEr~Ki~aEGAGA~gv---AA~L~~K~~~~kG~K~~~v~--SGGNID~~~l~~iI~kGL~~~GR~v~I~~~~~D~PG~L~  321 (381)
T TIGR01127       247 LERAKIVAEGAGAVGV---AAVLEDKVDYVKGKKVAVVV--SGGNIDLNLLEKIILKGLVKSGRKVRIETVIPDRPGALY  321 (381)
T ss_pred             HCCCCEEECCCHHHHH---HHHHHHHCCCCCCCEEEEEE--ECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHH
T ss_conf             6077478827458999---99997540368982899998--547768667778865522205836999999823898669


Q ss_pred             HHHHHHHHCCCCEEEEEECCCCCCC---CEEEEEEEEEECCHHHHHHHHHHHHCCCCCC
Q ss_conf             9999988669957888822677877---6135999921048899999999862383000
Q gi|254780900|r  369 KITSQMSDFNISLRLFSCPHQEENS---QEFSVFMITHKVSGKLIRDAIECFNGKSDAI  424 (438)
Q Consensus       369 ~It~ilak~~ISIesi~Q~~~~~~~---~~~~IViiTh~~~e~~i~~ai~~i~~l~~v~  424 (438)
T Consensus       322 ~ll~~~A~~~aNi~~i~hD-R~~~~~~~G~a~v~~~LEt~g~~H~~ei~~~L~~~Gy~f  379 (381)
T TIGR01127       322 KLLEVIAEERANIVKIEHD-RLSKEIPPGFAKVELELETRGKEHLDEILKVLRDKGYEF  379 (381)
T ss_pred             HHHHHHHHHCCCEEEEEEC-CCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCEE
T ss_conf             9999999816978999973-757777867538999984088689999999997637544