HHsearch alignment for GI: 254780900 and conserved domain: TIGR01327
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase; InterPro: IPR006236 This group of sequences represent the long form of D-3-phosphoglycerate dehydrogenase, they include the serA gene of one pathway of serine biosynthesis. Shorter forms not in this group include SerA from Escherichia coli. ; GO: 0004617 phosphoglycerate dehydrogenase activity, 0006564 L-serine biosynthetic process.
Probab=93.44 E-value=0.44 Score=27.59 Aligned_cols=355 Identities=16% Similarity=0.182 Sum_probs=151.9
Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCHHHHHCCCCCCEEEECCCCCC
Q ss_conf 99998256678999999999899999973996599999826852002788771022078889844889989998648888
Q gi|254780900|r 6 KVGVAGLGTVGSALIRSIQKREGRFKDLDQHSFVVSAISARDKNIDRGIDCLRYEWFDDPLIMAGEADIDVFVELIGGED 85 (438)
Q Consensus 6 kIgiiG~G~VG~~~~~~l~~~~~~l~~~~g~~i~i~~i~~r~~~k~~~~~~~~~~~~~d~~~li~~~~IDvVVEliGg~~ 85 (438)
T Consensus 141 ~~g~~g~g~~g~~~~~~~~~----------~~~~~~~~-dp~~~~~~~-~~~g~~~~~~~~~~~~~~--d~~~~h~p~~~ 206 (535)
T TIGR01327 141 TLGVIGLGRIGSEVAKRAKA----------FGMKVLAY-DPYLPPERA-EKLGVELLADLDELLARA--DFITLHTPLTP 206 (535)
T ss_pred EEEEEECCHHHHHHHHHHHH----------HCCEEEEE-CCCCCHHHH-HHHCHHHHHHHHHHHHHC--CEEEEECCCCC
T ss_conf 00011123011467665443----------12046752-565663346-550213332078886324--53576336660
Q ss_pred CCH---HHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHCCCEE----EEECCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 511---3578888632702885041778876899998753139669----960564530131899987641286203433
Q gi|254780900|r 86 YPA---YDAVRIALMRGCHVVTANKALIASHGKDLALLAQKNNAIL----NFEAAVAGGIPIIRILKNYVEYDEINRVYG 158 (438)
Q Consensus 86 ~pA---~~~i~~AL~~GkhVVTANKallA~~g~eL~~lA~~~gv~l----~~easV~ggiPii~~l~~~l~~~~i~~i~G 158 (438)
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~-~~l~~~~~~g~~~~~~~d~~~~~p~~--p~~~~~~~l~~~~~~~~~ph 283 (535)
T TIGR01327 207 ETKGLIGAEELAKLKPGVIIVNCARGGLIDE-AALYEALEEGHVGGAALDVFEKEPPT--PFIGEDNPLLDLDNVVLTPH 283 (535)
T ss_pred HHHHHCCHHHHHHHCCCEEEEEECCCCCCCH-HHHHHHHHCCCHHHHEEEHHCCCCCC--CCCCCCHHHHCCCCCEECCC
T ss_conf 2332103256664047606985034663206-88998763131001000000025775--43244101210221011134
Q ss_pred EECCCHHHHEEHHHCCCCCHHHHHHHHHHCCCCCC---CCCCCCCH-------HHHHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 31420000000010068778899887876176156---53223211-------789999999999981885553100012
Q gi|254780900|r 159 IINGTCNYILSHMNNLGLSFQDCLEEARRQGYAEG---DATFDING-------VDSSHKIAILSAIAFGIDTSVEGVYCE 228 (438)
Q Consensus 159 IlnGT~nyIL~~m~~~g~~f~~al~~Aq~lGyaE~---DP~~Di~G-------~Daa~Kl~ILa~~~~g~~~~~~~v~~~ 228 (438)
T Consensus 284 ~g~~~-~~--~~-~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 359 (535)
T TIGR01327 284 LGAST-EE--AQ-ENVGLDVAEEVLDALKGLPVPNAVNLPGLDPDVLEKLKPYLDLAEKLGKLAGQLLGGGVRKVEVTYR 359 (535)
T ss_pred CCCCH-HH--HH-HHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 45421-46--67-7778888999999860331000102566564556766678888887777887640453203677750
Q ss_pred HH-HHCCHHHHHHHHHCC-------CEEEEEEEE-EECCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEE-EEE---E
Q ss_conf 23-204767403478719-------858741013-3136783569999864167730003665416898311-310---0
Q gi|254780900|r 229 GI-SNITLEDIRGAADFG-------YCIKFLAMA-RRKGKGIIRYVYPVLLKYDSVMALVDGITNAVVIETN-GLG---K 295 (438)
Q Consensus 229 gI-~~i~~~di~~a~~~g-------~~ikli~~~-~~~~~~i~~~V~P~li~~~~~la~v~g~~Nai~i~~~-~~g---~ 295 (438)
T Consensus 360 g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 431 (535)
T TIGR01327 360 GELAELETEPLTRALLKGLLKPVLDDEVNLVNAPALAKERGITVEESK--------SESSPDYDNLLEVTVTGDGGEERE 431 (535)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEC--------CCCCCCCCCEEEEEEECCCCCCCE
T ss_conf 431110025788999887764431121100000123320252245301--------113566452489998147874212
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 58972687666102068899999974177776556666783100234438853446532799992488874899999988
Q gi|254780900|r 296 LTMTGPGAGGSATASAVLGDICSIAKTNTQKSVSWALGKESSSFSVIHCDGVYEEEKEYFIRLTIRNFEGILDKITSQMS 375 (438)
Q Consensus 296 ~~~~G~GAG~~~TAsaV~sDli~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yYLRl~v~DkpGVLa~It~ila 375 (438)
T Consensus 432 ~~~~g~----------~~-------------------~~~~~~~~~~~~~~~~~~p~g~~~~~~~~d~pg~~g~~g~~~g 482 (535)
T TIGR01327 432 VSVAGT----------VF-------------------GGGGPRITEIDGFEVDLEPEGYLLIILHLDKPGVIGKVGSLLG 482 (535)
T ss_pred EEEEEE----------EE-------------------CCCCCEEEEECCEEEEECCCCEEEEEEECCCCCHHHHHHHHHH
T ss_conf 466432----------21-------------------4765036764150330035751789850676521455666641
Q ss_pred HCCCCEEEEEECCC-CCCCCEEEEEEEEEECCHHHHHHHHHHHHC
Q ss_conf 66995788882267-787761359999210488999999998623
Q gi|254780900|r 376 DFNISLRLFSCPHQ-EENSQEFSVFMITHKVSGKLIRDAIECFNG 419 (438)
Q Consensus 376 k~~ISIesi~Q~~~-~~~~~~~~IViiTh~~~e~~i~~ai~~i~~ 419 (438)
T Consensus 483 ~~~~~~~~~~~g~~~~~gg~~~~~~~~d~~~~~~~~~~-~~~~~~ 526 (535)
T TIGR01327 483 EAGINIAGFQLGRKDEKGGDALLLLSLDDPLPDEVLEE-LKELPG 526 (535)
T ss_pred HCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHH-HHHCCH
T ss_conf 03662000111544456762378886066677579999-863010