HHsearch alignment for GI: 254780900 and conserved domain: cd04873
>cd04873 ACT_UUR-ACR-like ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD. This ACT domain family, ACT_UUR_ACR-like, includes the two C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD; including those enzymes similar to the GlnD found in enteric Escherichia coli and those found in photosynthetic, nitrogen-fixing bacterium Rhodospirillum rubrum. Also included in this CD are the four ACT domains of a novel protein composed almost entirely of ACT domain repeats (the ACR protein) and like proteins. These ACR proteins, found in Arabidopsis and Oryza, are proposed to function as novel regulatory or sensor proteins in plants. This CD also includes the first of the two ACT domains that comprise the Glycine Cleavage System Transcriptional Repressor (GcvR) protein and related domains, as well as, the N-terminal ACT domain of a yet characterized Arabidopsis/Oryza predicted t
Probab=95.31 E-value=0.17 Score=30.51 Aligned_cols=60 Identities=17% Similarity=0.277 Sum_probs=41.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEECCH----HHHHHHHHHH
Q ss_conf 9999248887489999998866995788882267787761359999210488----9999999986
Q gi|254780900|r 356 IRLTIRNFEGILDKITSQMSDFNISLRLFSCPHQEENSQEFSVFMITHKVSG----KLIRDAIECF 417 (438)
Q Consensus 356 LRl~v~DkpGVLa~It~ilak~~ISIesi~Q~~~~~~~~~~~IViiTh~~~e----~~i~~ai~~i 417 (438)
T Consensus 3 i~i~~~DrpgLl~~i~~~l~~~~l~I~~A~I~T-~~-~~~~D~F~V~d~~g~~~~~~~~~~l~~~L 66 (70)
T cd04873 3 VEVYAPDRPGLLADITRVLADLGLNIHDARIST-TG-ERALDVFYVTDSDGRPLDPERIARLEEAL 66 (70)
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEE-CC-CEEEEEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf 999968978899999999988795077999996-49-98999999988996939999999999999