HHsearch alignment for GI: 254780900 and conserved domain: cd04878

>cd04878 ACT_AHAS N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS). ACT_AHAS: N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS). AHAS catalyses the first common step in the biosynthesis of the three branched-chain amino acids. The first step involves the condensation of either pyruvate or 2-ketobutyrate with the two-carbon hydroxyethyl fragment derived from another pyruvate molecule, covalently bound to the coenzyme thiamine diphosphate. Bacterial AHASs generally consist of regulatory and catalytic subunits. The effector (valine) binding sites are proposed to be located in two symmetrically related positions in the interface between a pair of N-terminal ACT domains with the C-terminal domain of IlvH contacting the catalytic dimer. Plants Arabidopsis and Oryza have tandem IlvH subunits; both the first and second ACT domain sequences are present in this CD. Members of
Probab=97.93  E-value=9.2e-05  Score=53.44  Aligned_cols=70  Identities=11%  Similarity=0.255  Sum_probs=57.3

Q ss_pred             EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCC
Q ss_conf             799992488874899999988669957888822677877613599992104889999999986238300047
Q gi|254780900|r  355 FIRLTIRNFEGILDKITSQMSDFNISLRLFSCPHQEENSQEFSVFMITHKVSGKLIRDAIECFNGKSDAIRY  426 (438)
Q Consensus       355 YLRl~v~DkpGVLa~It~ilak~~ISIesi~Q~~~~~~~~~~~IViiTh~~~e~~i~~ai~~i~~l~~v~~~  426 (438)
T Consensus         2 tisvlveN~pGvL~Rit~lF~rRg~NI~Sl~v~~-te~~~~sR~tivv~-~~~~~i~qi~kQL~KlidVi~V   71 (72)
T cd04878           2 TLSVLVENEPGVLNRISGLFARRGFNIESLTVGP-TEDPGISRITIVVE-GDDDVIEQIVKQLNKLVDVLKV   71 (72)
T ss_pred             EEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEE-CCCCCEEEEEEEEE-CCHHHHHHHHHHHHCCCCEEEE
T ss_conf             7999997787899999999860785567899861-37998489999997-8889999999998577687995