HHsearch alignment for GI: 254780900 and conserved domain: cd05313
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=94.68 E-value=0.28 Score=29.04 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=28.2
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
Q ss_conf 26999982566789999999998999999739965999998268520
Q gi|254780900|r 4 VLKVGVAGLGTVGSALIRSIQKREGRFKDLDQHSFVVSAISARDKNI 50 (438)
Q Consensus 4 ~ikIgiiG~G~VG~~~~~~l~~~~~~l~~~~g~~i~i~~i~~r~~~k 50 (438)
T Consensus 38 g~~vaIQGfGnVG~~aA~~l~e--------~G--akvVaVsD~~G~i 74 (254)
T cd05313 38 GKRVAISGSGNVAQYAAEKLLE--------LG--AKVVTLSDSKGYV 74 (254)
T ss_pred CCEEEEECCCHHHHHHHHHHHH--------CC--CEEEEEECCCCEE
T ss_conf 9999998977999999999997--------79--9799998578508