HHsearch alignment of GI: 254780901 and MMDB domain: 2fn9_A_1-106_247-290

>2fn9_A (A:1-106,A:247-290) Ribose ABC transporter, periplasmic ribose- binding protein; RBP, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima MSB8} PDB: 2fn8_A*
Probab=93.17  E-value=0.59  Score=26.93  Aligned_cols=103  Identities=14%  Similarity=0.113  Sum_probs=68.1

Q ss_pred             CEEEEE-CCCCCHHHHH-HHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC-HHHHHHHH
Q ss_conf             799994-0788615289-99999999769947998078743366889789887420268689996488762-34555554
Q gi|254780901|r   94 KIMIFG-DYDVDGAASV-ALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTS-YDALQYAT  170 (600)
Q Consensus        94 kI~I~g-DyD~DGitst-ail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~-~e~i~~a~  170 (600)
                      +|.+.- +.+-.-.++. .-+-+.++..|.++.+.-++.-.+   -....++.+...+++-||.+-...++ .+.++.+.
T Consensus         4 ~Igvi~~~~~~~f~~~i~~gie~aa~~~G~~v~l~~~~~d~~---~~~~~i~~l~~~~vdgIIi~~~~~~~~~~~i~~l~   80 (150)
T 2fn9_A            4 KMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQNDTA---KESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAK   80 (150)
T ss_dssp             EEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHH---HHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHH
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH---HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf             899994899898999999999999998599899996899989---99999999996599869873156521499999999


Q ss_pred             HCCCCEEEECCCCCCCCCCCCEEEECCCC
Q ss_conf             17982799615447655567256523788
Q gi|254780901|r  171 NQGIDVIVIDHHQVKSEEIPAYALVNPNR  199 (600)
Q Consensus       171 ~~GidvIVtDHH~~~~~~p~a~aivNP~~  199 (600)
                      +.|+-|+.+|.+..+....-.+.-.+|+.
T Consensus        81 ~~gIPvV~id~~~~~~~~~~~~V~~Dp~~  109 (150)
T 2fn9_A           81 EAGIPVFCVDRGINARGLAVAQIYSDPKL  109 (150)
T ss_dssp             HTTCCEEEESSCCSCSSSSSEEEEECHHH
T ss_pred             HCCCCCEEECCCCCCCCCCCCEECCCHHH
T ss_conf             75996256436765455666666010999