HHsearch alignment of GI: 254780901 and MMDB domain: 2fn9_A_1-106_247-290
>2fn9_A (A:1-106,A:247-290) Ribose ABC transporter, periplasmic ribose- binding protein; RBP, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima MSB8} PDB: 2fn8_A*
Probab=93.17 E-value=0.59 Score=26.93 Aligned_cols=103 Identities=14% Similarity=0.113 Sum_probs=68.1
Q ss_pred CEEEEE-CCCCCHHHHH-HHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC-HHHHHHHH
Q ss_conf 799994-0788615289-99999999769947998078743366889789887420268689996488762-34555554
Q gi|254780901|r 94 KIMIFG-DYDVDGAASV-ALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTS-YDALQYAT 170 (600)
Q Consensus 94 kI~I~g-DyD~DGitst-ail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~-~e~i~~a~ 170 (600)
+|.+.- +.+-.-.++. .-+-+.++..|.++.+.-++.-.+ -....++.+...+++-||.+-...++ .+.++.+.
T Consensus 4 ~Igvi~~~~~~~f~~~i~~gie~aa~~~G~~v~l~~~~~d~~---~~~~~i~~l~~~~vdgIIi~~~~~~~~~~~i~~l~ 80 (150)
T 2fn9_A 4 KMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIFDSQNDTA---KESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAK 80 (150)
T ss_dssp EEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHH---HHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH---HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 899994899898999999999999998599899996899989---99999999996599869873156521499999999
Q ss_pred HCCCCEEEECCCCCCCCCCCCEEEECCCC
Q ss_conf 17982799615447655567256523788
Q gi|254780901|r 171 NQGIDVIVIDHHQVKSEEIPAYALVNPNR 199 (600)
Q Consensus 171 ~~GidvIVtDHH~~~~~~p~a~aivNP~~ 199 (600)
+.|+-|+.+|.+..+....-.+.-.+|+.
T Consensus 81 ~~gIPvV~id~~~~~~~~~~~~V~~Dp~~ 109 (150)
T 2fn9_A 81 EAGIPVFCVDRGINARGLAVAQIYSDPKL 109 (150)
T ss_dssp HTTCCEEEESSCCSCSSSSSEEEEECHHH
T ss_pred HCCCCCEEECCCCCCCCCCCCEECCCHHH
T ss_conf 75996256436765455666666010999