HHsearch results for GI: 254780901 and protein with PDBid: 3kdf_D

>3kdf_D Replication protein A 32 kDa subunit; wheat GERM cell free, protein complex, center for eukaryotic structural genomics, PSI; HET: MSE; 1.98A {Homo sapiens} PDB: 2pqa_A 1quq_A 1l1o_B
Probab=95.58  E-value=0.16  Score=30.18  Aligned_cols=86  Identities=15%  Similarity=0.281  Sum_probs=62.3

Q ss_pred             CCCEEEECCEEEEEEEEECC--------CEEEEEEECCCCCEEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEEEEECC
Q ss_conf             98468427809988888479--------6499999849987799999778787012355306998799999976654578
Q gi|254780901|r  507 PNPVFAFPNHKLQSIRVVNL--------AHLQMTFESQDSETLQAIAFRVYGTPLGEFLMQSRGKRMHVTGHLCVNYWRG  578 (600)
Q Consensus       507 peP~F~~~~~~i~~~r~vGk--------~Hlkl~l~~~~g~~i~aI~Fn~~~~~~~~~~~~~~g~~idii~~l~~N~~~G  578 (600)
                      ++-.|.+.+..+..++++|.        ....+.+.|..|..+++.+|--.+....+......|..+.+.|+++.  |+|
T Consensus        20 ~~~~f~i~g~~v~~V~iVG~V~~v~~~~t~~~y~IdDgTG~~i~v~~w~~~~~~~~~~~~i~~g~yVrV~G~lk~--~~~   97 (132)
T 3kdf_D           20 VDEVFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRS--FQN   97 (132)
T ss_dssp             SSSCEEETTEECCEEEEEEEEEEEEECSSEEEEEEECSSSSCEEEEEEC---------CCCCTTCEEEEEEEEEE--ETT
T ss_pred             CCCCEEECCEEEEEEEEEEEEEEEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEE--ECC
T ss_conf             899789999999999999999999987978999998899994899997787756332540547999999999953--098


Q ss_pred             CCEEEEEEEEEEECCCCC
Q ss_conf             110589999801113112
Q gi|254780901|r  579 SKRCQLRVLDASPVEGHH  596 (600)
Q Consensus       579 ~~s~QL~I~Di~p~e~~~  596 (600)
                      ++  |+.+..++|+++-+
T Consensus        98 ~~--~I~~~~i~~v~D~N  113 (132)
T 3kdf_D           98 KK--SLVAFKIMPLEDMN  113 (132)
T ss_dssp             EE--EEEEEEEEECSSTH
T ss_pred             EE--EEEEEEEEEECCCC
T ss_conf             58--99999999927957