HHsearch results for GI: 254780901 and protein with PDBid: 3kdf_D
>3kdf_D Replication protein A 32 kDa subunit; wheat GERM cell free, protein complex, center for eukaryotic structural genomics, PSI; HET: MSE; 1.98A {Homo sapiens} PDB: 2pqa_A 1quq_A 1l1o_B
Probab=95.58 E-value=0.16 Score=30.18 Aligned_cols=86 Identities=15% Similarity=0.281 Sum_probs=62.3
Q ss_pred CCCEEEECCEEEEEEEEECC--------CEEEEEEECCCCCEEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEEEEECC
Q ss_conf 98468427809988888479--------6499999849987799999778787012355306998799999976654578
Q gi|254780901|r 507 PNPVFAFPNHKLQSIRVVNL--------AHLQMTFESQDSETLQAIAFRVYGTPLGEFLMQSRGKRMHVTGHLCVNYWRG 578 (600)
Q Consensus 507 peP~F~~~~~~i~~~r~vGk--------~Hlkl~l~~~~g~~i~aI~Fn~~~~~~~~~~~~~~g~~idii~~l~~N~~~G 578 (600)
++-.|.+.+..+..++++|. ....+.+.|..|..+++.+|--.+....+......|..+.+.|+++. |+|
T Consensus 20 ~~~~f~i~g~~v~~V~iVG~V~~v~~~~t~~~y~IdDgTG~~i~v~~w~~~~~~~~~~~~i~~g~yVrV~G~lk~--~~~ 97 (132)
T 3kdf_D 20 VDEVFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRS--FQN 97 (132)
T ss_dssp SSSCEEETTEECCEEEEEEEEEEEEECSSEEEEEEECSSSSCEEEEEEC---------CCCCTTCEEEEEEEEEE--ETT
T ss_pred CCCCEEECCEEEEEEEEEEEEEEEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEE--ECC
T ss_conf 899789999999999999999999987978999998899994899997787756332540547999999999953--098
Q ss_pred CCEEEEEEEEEEECCCCC
Q ss_conf 110589999801113112
Q gi|254780901|r 579 SKRCQLRVLDASPVEGHH 596 (600)
Q Consensus 579 ~~s~QL~I~Di~p~e~~~ 596 (600)
++ |+.+..++|+++-+
T Consensus 98 ~~--~I~~~~i~~v~D~N 113 (132)
T 3kdf_D 98 KK--SLVAFKIMPLEDMN 113 (132)
T ss_dssp EE--EEEEEEEEECSSTH
T ss_pred EE--EEEEEEEEEECCCC
T ss_conf 58--99999999927957