Query gi|254780901|ref|YP_003065314.1| single-stranded-DNA-specific exonuclease protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 600
No_of_seqs 191 out of 2089
Neff 6.5
Searched_HMMs 13730
Date Wed Jun 1 10:54:36 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780901.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ir6a_ c.107.1.2 (A:) Exonucl 100.0 0 0 802.9 31.5 381 72-480 4-384 (385)
2 d1wpna_ c.107.1.1 (A:) Mangane 97.9 1.9E-05 1.4E-09 59.0 7.6 146 93-260 1-156 (187)
3 d1k20a_ c.107.1.1 (A:) Mangane 96.6 0.0027 1.9E-07 42.2 6.5 144 94-259 2-157 (310)
4 d2pi2a1 b.40.4.3 (A:44-171) Re 95.8 0.077 5.6E-06 30.8 10.6 83 510-596 20-110 (128)
5 d1x94a_ c.80.1.3 (A:) Phosphoh 92.3 0.29 2.1E-05 26.3 7.1 109 70-182 22-147 (191)
6 d1iuka_ c.2.1.8 (A:) Hypotheti 91.5 0.42 3E-05 25.0 7.2 53 83-136 4-57 (136)
7 d2jfga1 c.5.1.1 (A:1-93) UDP-N 90.7 0.23 1.7E-05 27.1 5.2 81 91-177 4-92 (93)
8 d1xm3a_ c.1.31.1 (A:) Thiazole 90.5 0.55 4E-05 24.1 9.7 96 74-177 107-203 (251)
9 d1tk9a_ c.80.1.3 (A:) Phosphoh 89.1 0.64 4.7E-05 23.6 6.5 105 74-181 24-145 (188)
10 d1x92a_ c.80.1.3 (A:) Phosphoh 89.0 0.7 5.1E-05 23.3 9.8 101 76-180 26-144 (194)
11 d1nria_ c.80.1.3 (A:) Hypothet 87.9 0.82 6E-05 22.7 16.7 180 73-273 41-242 (248)
12 d1pvva2 c.78.1.1 (A:151-313) O 86.3 0.56 4E-05 24.1 4.8 77 91-184 3-83 (163)
13 d1t70a_ d.159.1.9 (A:) Putativ 84.8 0.68 4.9E-05 23.4 4.6 73 94-169 2-77 (255)
14 d1t5la2 c.37.1.19 (A:415-595) 84.6 1.2 8.5E-05 21.5 8.4 91 78-198 17-107 (181)
15 d2z06a1 d.159.1.10 (A:1-252) H 84.2 0.98 7.2E-05 22.1 5.2 75 94-171 2-79 (252)
16 d1otha2 c.78.1.1 (A:185-354) O 82.9 0.74 5.4E-05 23.1 4.1 76 91-183 3-82 (170)
17 d1ozha1 c.31.1.3 (A:188-366) C 82.7 1.4 0.0001 21.0 9.2 132 80-228 8-150 (179)
18 d1u9ya1 c.61.1.2 (A:1-155) Pho 82.5 1.4 0.0001 20.9 7.7 71 92-162 47-128 (155)
19 d1t71a_ d.159.1.9 (A:) Hypothe 81.3 1.5 0.00011 20.7 5.3 76 91-169 3-83 (281)
20 d1usga_ c.93.1.1 (A:) Leucine- 80.8 1.6 0.00012 20.5 10.1 84 92-179 138-223 (346)
21 d1thfd_ c.1.2.1 (D:) Cyclase s 79.7 1.7 0.00013 20.2 5.2 72 112-184 35-107 (253)
22 d1ml4a2 c.78.1.1 (A:152-308) A 79.5 1.7 0.00013 20.2 7.3 78 91-184 3-81 (157)
23 d2fywa1 c.135.1.1 (A:1-265) Hy 79.1 1.4 0.0001 20.9 4.6 30 150-182 37-66 (265)
24 d1vd6a1 c.1.18.3 (A:8-224) Put 79.1 1.2 8.6E-05 21.5 4.1 28 161-188 16-43 (217)
25 d1dkua1 c.61.1.2 (A:8-166) Pho 77.7 1.9 0.00014 19.8 6.1 72 92-163 48-132 (159)
26 d1ka9f_ c.1.2.1 (F:) Cyclase s 77.3 1.4 0.0001 20.9 4.1 72 112-184 35-107 (251)
27 d1okga1 c.46.1.2 (A:7-162) 3-m 77.3 1.8 0.00013 20.0 4.7 52 72-125 68-120 (156)
28 d1dxya2 c.23.12.1 (A:1-100,A:3 76.7 2.1 0.00015 19.6 6.4 106 94-229 2-123 (131)
29 d1wv2a_ c.1.31.1 (A:) Thiazole 76.4 2.1 0.00015 19.5 9.9 94 76-177 111-205 (243)
30 d1vlva2 c.78.1.1 (A:153-313) O 75.4 2.2 0.00016 19.4 6.1 77 91-183 2-82 (161)
31 d1h5ya_ c.1.2.1 (A:) Cyclase s 74.5 2.2 0.00016 19.4 4.5 68 112-180 37-105 (252)
32 d1nmpa_ c.135.1.1 (A:) Hypothe 72.5 1.8 0.00013 20.1 3.6 29 150-181 36-64 (247)
33 d1rdua_ c.55.5.1 (A:) Hypothet 72.5 1.7 0.00012 20.2 3.5 53 126-181 39-91 (116)
34 d1ecfa1 c.61.1.1 (A:250-492) G 71.1 2.8 0.0002 18.6 7.0 129 22-178 52-186 (243)
35 d1vzwa1 c.1.2.1 (A:2-240) Phos 70.4 2.8 0.00021 18.5 6.1 71 111-183 35-106 (239)
36 d1guda_ c.93.1.1 (A:) D-allose 69.7 2.9 0.00021 18.4 5.6 70 114-184 25-95 (288)
37 d2c4ka1 c.61.1.2 (A:7-166) PRP 69.7 2.9 0.00021 18.4 8.5 70 92-161 51-132 (160)
38 d1jeoa_ c.80.1.3 (A:) Probable 68.6 3.1 0.00022 18.2 14.8 97 80-195 25-127 (177)
39 d2ji7a1 c.31.1.3 (A:195-369) O 67.5 3.2 0.00023 18.1 7.7 84 70-161 4-90 (175)
40 d1c4oa2 c.37.1.19 (A:410-583) 67.0 3.3 0.00024 18.0 8.3 74 78-158 17-90 (174)
41 d1tksa_ d.115.1.2 (A:) 3,4-dih 66.9 2.1 0.00015 19.6 3.0 91 82-172 6-111 (202)
42 d1gph11 c.61.1.1 (1:235-465) G 64.9 3.6 0.00026 17.7 5.5 132 19-178 43-180 (231)
43 d1dxha2 c.78.1.1 (A:151-335) O 64.9 3.6 0.00026 17.7 8.0 78 91-184 4-85 (185)
44 d1vmka_ c.56.2.1 (A:) Purine n 63.6 3.8 0.00027 17.6 4.0 128 75-206 2-158 (265)
45 d2anua1 c.6.3.1 (A:5-233) Hypo 61.8 2.4 0.00017 19.1 2.5 25 161-185 20-45 (229)
46 d1vpxa_ c.1.10.1 (A:) Decameri 61.3 4.1 0.0003 17.3 4.5 85 79-177 42-128 (218)
47 d1kwga3 c.23.16.5 (A:394-590) 60.8 4.2 0.00031 17.2 5.8 55 111-165 36-99 (197)
48 d2dria_ c.93.1.1 (A:) D-ribose 60.4 4.3 0.00031 17.1 6.9 68 113-183 24-92 (271)
49 d2gx8a1 c.135.1.1 (A:4-373) Ni 59.8 4 0.00029 17.3 3.4 31 150-184 38-68 (370)
50 d2d59a1 c.2.1.8 (A:4-142) Hypo 59.4 4.4 0.00032 17.0 9.0 94 83-179 10-104 (139)
51 d2uubb1 c.23.15.1 (B:7-240) Ri 59.4 4.4 0.00032 17.0 9.8 101 74-182 41-185 (234)
52 d1gm5a2 b.40.4.9 (A:106-285) R 58.6 4.5 0.00033 16.9 8.3 50 528-580 82-131 (180)
53 d1zpda1 c.31.1.3 (A:188-362) P 58.1 4.6 0.00034 16.9 8.9 86 77-163 7-103 (175)
54 d2iv2x2 c.81.1.1 (X:1-564) For 57.5 4.7 0.00034 16.8 8.9 104 78-185 80-207 (564)
55 d1duvg2 c.78.1.1 (G:151-333) O 57.4 4.7 0.00035 16.8 7.5 78 91-184 4-85 (183)
56 d1snna_ d.115.1.2 (A:) 3,4-dih 57.1 4.8 0.00035 16.7 6.7 91 82-172 3-125 (219)
57 d1zcca1 c.1.18.3 (A:1-240) Gly 56.3 4.9 0.00036 16.7 3.9 28 161-188 17-44 (240)
58 d1q6za1 c.31.1.3 (A:182-341) B 56.2 4.9 0.00036 16.6 6.2 79 80-159 7-95 (160)
59 d8abpa_ c.93.1.1 (A:) L-arabin 56.1 5 0.00036 16.6 6.9 71 114-188 25-96 (305)
60 d1tqxa_ c.1.2.2 (A:) D-ribulos 56.0 5 0.00036 16.6 3.4 13 76-88 15-27 (221)
61 d1f8fa2 c.2.1.1 (A:163-336) Be 55.7 5 0.00037 16.6 7.1 76 89-178 26-101 (174)
62 d1mkza_ c.57.1.1 (A:) MoaB {Es 55.6 5 0.00037 16.6 6.3 61 95-163 13-79 (170)
63 d1j4aa2 c.23.12.1 (A:2-103,A:3 55.1 5.1 0.00037 16.5 4.2 42 135-177 55-96 (134)
64 d2pjua1 c.92.3.1 (A:11-196) Pr 54.3 5.3 0.00038 16.4 7.0 113 45-179 53-166 (186)
65 d1gdea_ c.67.1.1 (A:) Aromatic 53.9 5.3 0.00039 16.4 7.3 101 75-183 92-202 (388)
66 d1p6qa_ c.23.1.1 (A:) CheY pro 52.9 4.9 0.00035 16.7 2.8 25 93-121 7-31 (129)
67 d1di6a_ c.57.1.1 (A:) MogA {Es 52.3 5.6 0.00041 16.2 5.1 61 95-161 7-75 (190)
68 d1m65a_ c.6.3.1 (A:) Hypotheti 52.2 3.7 0.00027 17.6 2.2 27 157-183 13-41 (244)
69 d1tjya_ c.93.1.1 (A:) AI-2 rec 52.0 5.7 0.00041 16.2 8.3 94 91-186 2-98 (316)
70 d2ftsa3 c.57.1.2 (A:499-653) G 51.8 5.7 0.00042 16.1 5.0 84 107-198 27-117 (155)
71 d2nqra3 c.57.1.2 (A:178-326) M 51.3 5.8 0.00042 16.1 7.3 84 107-198 27-115 (149)
72 d2g5ca2 c.2.1.6 (A:30-200) Pre 50.9 5.9 0.00043 16.0 6.9 44 94-149 3-46 (171)
73 d1vp8a_ c.49.1.2 (A:) Hypothet 50.9 5.9 0.00043 16.0 3.2 41 141-183 24-65 (190)
74 d1jbea_ c.23.1.1 (A:) CheY pro 49.9 4.4 0.00032 17.1 2.2 15 107-121 15-29 (128)
75 d1tuga1 c.78.1.1 (A:1-150,A:15 49.8 6.1 0.00044 15.9 7.7 19 192-210 122-140 (310)
76 d1pvda2 c.36.1.5 (A:2-181) Pyr 49.5 6.2 0.00045 15.9 3.8 70 300-403 28-99 (180)
77 d1b74a1 c.78.2.1 (A:1-105) Glu 47.8 6.5 0.00047 15.7 4.5 79 94-177 2-90 (105)
78 d1a2oa1 c.23.1.1 (A:1-140) Met 47.7 6.6 0.00048 15.7 3.4 49 139-190 16-66 (140)
79 d2gy9b1 c.23.15.1 (B:8-225) Ri 47.5 6.6 0.00048 15.7 11.2 97 74-178 38-177 (218)
80 d1uz5a3 c.57.1.2 (A:181-328) M 47.0 6.7 0.00049 15.6 8.6 80 107-196 27-113 (148)
81 d1jnra2 c.3.1.4 (A:2-256,A:402 45.7 7 0.00051 15.5 2.9 35 149-184 21-59 (356)
82 d1jlja_ c.57.1.1 (A:) Gephyrin 45.7 7 0.00051 15.5 4.3 46 107-156 22-73 (169)
83 d1ozha2 c.36.1.5 (A:7-187) Cat 45.1 7.1 0.00052 15.4 5.0 129 301-483 31-163 (181)
84 d1p3da1 c.5.1.1 (A:11-106) UDP 44.8 7.2 0.00052 15.4 7.0 27 150-177 68-95 (96)
85 d1ka9h_ c.23.16.1 (H:) GAT sub 44.8 7.2 0.00052 15.4 4.9 43 153-198 3-46 (195)
86 d1qapa1 c.1.17.1 (A:130-296) Q 44.3 2.4 0.00018 19.0 0.2 35 162-197 88-122 (167)
87 d1yt8a4 c.46.1.2 (A:243-372) T 44.0 7.4 0.00054 15.3 3.2 31 150-180 81-111 (130)
88 d1dbqa_ c.93.1.1 (A:) Purine r 43.4 7.5 0.00055 15.2 7.5 73 114-189 24-96 (282)
89 d1ys7a2 c.23.1.1 (A:7-127) Tra 43.4 7.5 0.00055 15.2 2.9 77 94-184 3-85 (121)
90 d2flia1 c.1.2.2 (A:3-219) D-ri 42.9 7.6 0.00056 15.2 4.1 95 75-179 13-113 (217)
91 d1pqwa_ c.2.1.1 (A:) Putative 42.9 7.7 0.00056 15.1 5.8 10 90-99 24-33 (183)
92 d1h1ya_ c.1.2.2 (A:) D-ribulos 42.8 7.7 0.00056 15.1 3.3 37 141-177 74-112 (220)
93 d1ibja_ c.67.1.3 (A:) Cystathi 42.3 7.8 0.00057 15.1 7.9 117 77-212 73-199 (380)
94 d1bgva1 c.2.1.7 (A:195-449) Gl 42.0 7.9 0.00057 15.1 8.5 31 137-167 132-162 (255)
95 d1wp9a2 c.37.1.19 (A:201-486) 42.0 7.9 0.00057 15.1 8.9 25 366-393 160-184 (286)
96 d3clsc1 c.26.2.3 (C:1-262) Sma 41.9 7.9 0.00058 15.0 5.9 99 71-177 36-143 (262)
97 d1b5pa_ c.67.1.1 (A:) Aspartat 41.6 8 0.00058 15.0 10.4 101 75-183 97-207 (382)
98 d1vkfa_ c.1.29.1 (A:) Glycerol 41.0 8.1 0.00059 14.9 7.0 73 106-185 30-106 (172)
99 d2g2ca1 c.57.1.1 (A:1-163) Put 41.0 7.1 0.00052 15.4 2.2 51 102-156 21-73 (163)
100 d1jf8a_ c.44.1.1 (A:) Arsenate 40.9 6.7 0.00049 15.6 2.0 18 133-150 39-56 (130)
101 d1y5ea1 c.57.1.1 (A:12-166) Mo 40.7 8.2 0.0006 14.9 6.2 56 95-156 7-68 (155)
102 d1uara1 c.46.1.2 (A:2-144) Sul 40.7 8.2 0.0006 14.9 4.6 51 72-125 57-108 (143)
103 d1mvoa_ c.23.1.1 (A:) PhoP rec 40.7 7.9 0.00058 15.0 2.4 53 93-159 3-55 (121)
104 d1u9la_ a.60.4.2 (A:) Transcri 40.6 8.2 0.0006 14.9 4.6 55 30-89 5-60 (68)
105 d1udca_ c.2.1.2 (A:) Uridine d 40.3 8.3 0.00061 14.9 8.0 76 94-178 2-78 (338)
106 d2aizp1 d.79.7.1 (P:1-134) Pep 40.1 8.4 0.00061 14.8 4.7 48 60-111 33-80 (134)
107 d1zh2a1 c.23.1.1 (A:2-120) Tra 40.0 6.5 0.00048 15.7 1.9 37 147-187 22-58 (119)
108 d1v5xa_ c.1.2.4 (A:) N-(5'phos 40.0 6.1 0.00045 15.9 1.7 23 158-180 6-28 (200)
109 d1edga_ c.1.8.3 (A:) Endogluca 40.0 8.4 0.00061 14.8 2.5 57 111-185 65-126 (380)
110 d1o1za_ c.1.18.3 (A:) Hypothet 39.7 8.5 0.00062 14.8 2.6 29 161-189 20-48 (226)
111 d2aaaa2 c.1.8.1 (A:1-381) Fung 39.5 8.5 0.00062 14.8 3.5 67 102-178 41-116 (381)
112 d1jnra3 d.168.1.1 (A:257-401) 39.1 3.1 0.00023 18.2 0.1 21 126-146 5-25 (145)
113 d1ekxa2 c.78.1.1 (A:151-310) A 39.1 8.7 0.00063 14.7 7.3 79 91-184 3-82 (160)
114 d1piia1 c.1.2.4 (A:255-452) N- 39.0 6.5 0.00047 15.7 1.7 20 158-177 6-25 (198)
115 d2c1ia1 c.6.2.3 (A:268-463) Pe 39.0 8.7 0.00063 14.7 5.5 46 101-150 7-54 (196)
116 d2j0sa2 c.37.1.19 (A:244-411) 38.5 8.8 0.00064 14.7 6.7 78 90-197 32-109 (168)
117 d1yioa2 c.23.1.1 (A:3-130) Res 38.5 8.5 0.00062 14.8 2.3 23 163-185 36-58 (128)
118 d1kgsa2 c.23.1.1 (A:2-123) Pho 38.4 8.9 0.00065 14.7 2.9 44 106-159 11-54 (122)
119 d1vj0a2 c.2.1.1 (A:156-337) Hy 38.3 8.9 0.00065 14.6 6.6 74 89-178 26-105 (182)
120 d1g57a_ d.115.1.2 (A:) 3,4-dih 38.3 8.5 0.00062 14.8 2.2 70 81-178 11-80 (209)
121 g1sse.1 g.78.1.1 (A:,B:) YAP1 37.8 6 0.00044 16.0 1.4 23 84-109 71-93 (121)
122 d1y5ia2 c.81.1.1 (A:1-1074) Re 37.7 9.1 0.00066 14.6 9.3 117 79-203 163-302 (1074)
123 d1wu2a3 c.57.1.2 (A:181-324) M 37.1 9.2 0.00067 14.5 2.9 58 108-172 32-91 (144)
124 d1pvda1 c.31.1.3 (A:182-360) P 36.8 9.3 0.00068 14.5 8.4 79 79-158 17-106 (179)
125 d1peya_ c.23.1.1 (A:) Sporulat 36.2 9.5 0.00069 14.4 5.3 56 92-161 1-56 (119)
126 d1ovma1 c.31.1.3 (A:181-341) I 36.2 9.5 0.00069 14.4 9.5 83 78-161 15-108 (161)
127 d1nsja_ c.1.2.4 (A:) N-(5'phos 35.9 7.8 0.00057 15.1 1.7 20 158-177 7-26 (205)
128 d1k4ia_ d.115.1.2 (A:) 3,4-dih 35.7 9.7 0.0007 14.4 2.9 22 82-103 4-25 (216)
129 d1xvia_ c.108.1.10 (A:) Putati 35.7 9.7 0.0007 14.4 4.6 60 92-175 2-61 (232)
130 d2ez9a1 c.31.1.3 (A:183-365) P 35.3 9.8 0.00071 14.3 11.6 77 80-159 18-104 (183)
131 d1xvla1 c.92.2.2 (A:49-327) Mn 35.1 9.9 0.00072 14.3 3.0 53 106-160 10-66 (279)
132 d1ceoa_ c.1.8.3 (A:) Endogluca 35.0 9.9 0.00072 14.3 2.2 22 164-185 73-94 (340)
133 d2f1ka2 c.2.1.6 (A:1-165) Prep 34.9 9.9 0.00072 14.3 5.7 43 94-150 2-44 (165)
134 d1gu7a2 c.2.1.1 (A:161-349) 2, 34.9 10 0.00073 14.3 3.8 42 139-180 44-85 (189)
135 d1xnya2 c.14.1.4 (A:268-530) P 34.6 4 0.00029 17.4 0.0 27 475-501 222-248 (263)
136 d1m6ia2 c.3.1.5 (A:264-400) Ap 34.6 10 0.00073 14.2 8.2 84 73-163 19-109 (137)
137 d2pw9a1 c.97.1.5 (A:7-257) Unc 33.9 10 0.00075 14.1 3.7 17 387-403 221-237 (251)
138 d3ct6a1 c.54.1.2 (A:1-123) PTS 33.7 10 0.00075 14.1 7.2 65 112-177 18-86 (123)
139 d1dz3a_ c.23.1.1 (A:) Sporulat 33.7 10 0.00075 14.1 2.2 23 163-185 37-59 (123)
140 d1sc6a2 c.23.12.1 (A:7-107,A:2 33.7 10 0.00076 14.1 5.4 38 137-177 59-96 (132)
141 d1ny5a1 c.23.1.1 (A:1-137) Tra 33.6 10 0.00076 14.1 2.9 23 163-185 34-56 (137)
142 d2ihta1 c.31.1.3 (A:198-374) C 33.4 10 0.00076 14.1 8.0 82 77-161 4-100 (177)
143 d1urha1 c.46.1.2 (A:2-148) 3-m 33.4 10 0.00076 14.1 4.9 51 72-125 64-116 (147)
144 d2naca2 c.23.12.1 (A:1-147,A:3 33.3 10 0.00076 14.1 5.4 82 84-177 58-140 (186)
145 d1y0pa2 c.3.1.4 (A:111-361,A:5 33.3 11 0.00076 14.1 3.7 44 141-185 8-51 (308)
146 d1dbwa_ c.23.1.1 (A:) Transcri 33.1 11 0.00077 14.1 2.7 16 109-124 16-31 (123)
147 d2a22a1 d.159.1.7 (A:4-196) Va 33.0 11 0.00077 14.0 6.4 30 168-197 114-144 (193)
148 d1yb5a2 c.2.1.1 (A:121-294) Qu 32.8 11 0.00078 14.0 7.1 33 89-125 26-58 (174)
149 d2aeea1 c.61.1.1 (A:1-208) Oro 32.2 11 0.00079 13.9 4.7 103 65-177 39-146 (208)
150 d1hdoa_ c.2.1.2 (A:) Biliverdi 31.8 11 0.00081 13.9 7.1 71 91-178 2-72 (205)
151 d1y81a1 c.2.1.8 (A:6-121) Hypo 31.7 11 0.00081 13.9 7.7 87 93-182 2-89 (116)
152 d1byka_ c.93.1.1 (A:) Trehalos 31.6 11 0.00081 13.9 6.4 39 141-182 50-88 (255)
153 d2f7wa1 c.57.1.1 (A:2-174) Mog 31.5 11 0.00082 13.9 3.6 59 95-156 7-72 (173)
154 d2a9pa1 c.23.1.1 (A:2-118) DNA 31.1 11 0.00083 13.8 2.2 51 94-158 2-52 (117)
155 d1qkka_ c.23.1.1 (A:) Transcri 31.0 11 0.00083 13.8 2.0 23 163-185 34-56 (140)
156 d1srva_ c.8.5.1 (A:) GroEL, A 30.4 12 0.00085 13.7 5.9 101 73-183 34-139 (145)
157 d2nu7a1 c.2.1.8 (A:2-120) Succ 30.4 12 0.00085 13.7 5.6 82 90-178 4-92 (119)
158 d2ayxa1 c.23.1.1 (A:817-949) S 30.3 12 0.00085 13.7 2.9 52 94-159 10-61 (133)
159 d1t4ba1 c.2.1.3 (A:1-133,A:355 30.0 12 0.00086 13.7 5.3 87 93-183 2-99 (146)
160 d1kmma2 d.104.1.1 (A:4-325) Hi 29.7 8.3 0.00061 14.9 1.0 26 432-457 287-313 (322)
161 d1mb4a1 c.2.1.3 (A:1-132,A:355 29.6 12 0.00087 13.6 5.0 85 94-182 2-97 (147)
162 d1tqja_ c.1.2.2 (A:) D-ribulos 29.6 12 0.00087 13.6 3.8 89 76-179 15-116 (221)
163 d1jqba2 c.2.1.1 (A:1140-1313) 29.6 12 0.00087 13.6 6.5 60 80-154 18-77 (174)
164 d1p5dx1 c.84.1.1 (X:9-154) Pho 29.4 12 0.00088 13.6 3.6 31 157-187 73-106 (146)
165 d2a9va1 c.23.16.1 (A:1-196) GM 29.1 12 0.00089 13.6 3.4 26 154-179 5-31 (196)
166 d2r8ba1 c.69.1.14 (A:44-246) U 28.9 12 0.00089 13.5 6.3 17 378-396 103-119 (203)
167 d1mxsa_ c.1.10.1 (A:) KDPG ald 28.8 12 0.0009 13.5 6.0 97 77-183 2-99 (216)
168 d2afwa1 c.56.5.8 (A:33-361) Gl 28.8 12 0.0009 13.5 3.3 18 74-91 48-65 (329)
169 d1vkya_ e.53.1.1 (A:) Queuosin 28.6 12 0.0009 13.5 3.0 12 384-395 245-256 (332)
170 d1rpxa_ c.1.2.2 (A:) D-ribulos 28.3 13 0.00091 13.5 4.0 132 61-203 13-157 (230)
171 d1oi7a1 c.2.1.8 (A:1-121) Succ 28.1 13 0.00092 13.4 5.0 18 161-178 76-93 (121)
172 d1oywa3 c.37.1.19 (A:207-406) 27.6 13 0.00094 13.4 7.7 65 83-158 19-89 (200)
173 d1eo1a_ c.55.5.1 (A:) Hypothet 27.6 13 0.00094 13.4 4.5 45 135-182 51-95 (124)
174 d1vjza_ c.1.8.3 (A:) Endogluca 27.4 12 0.0009 13.5 1.6 22 165-186 66-87 (325)
175 d1t9ba2 c.36.1.5 (A:89-263) Ac 27.2 13 0.00095 13.3 3.7 119 301-467 30-149 (175)
176 d1krwa_ c.23.1.1 (A:) NTRC rec 27.1 13 0.00096 13.3 3.1 55 92-160 3-57 (123)
177 d1zesa1 c.23.1.1 (A:3-123) Pho 26.3 13 0.00098 13.2 2.3 53 93-159 1-53 (121)
178 d1kida_ c.8.5.1 (A:) GroEL, A 25.9 14 0.001 13.2 4.4 101 73-183 42-147 (193)
179 d1zcza2 c.97.1.4 (A:158-452) A 25.2 14 0.001 13.1 4.6 22 444-465 235-256 (295)
180 d1qe3a_ c.69.1.1 (A:) Thermoph 25.2 9.3 0.00068 14.5 0.6 45 56-100 138-187 (483)
181 d2r25b1 c.23.1.1 (B:1087-1214) 25.1 14 0.001 13.1 3.6 21 444-464 104-124 (128)
182 d1ioka2 c.8.5.1 (A:191-366) Gr 25.1 14 0.001 13.1 2.0 100 74-183 36-140 (176)
183 d1vdma1 c.61.1.1 (A:1-153) Ppr 24.8 14 0.001 13.0 3.5 100 74-176 7-113 (153)
184 d1n2za_ c.92.2.2 (A:) Vitamin 24.6 14 0.0011 13.0 3.8 38 142-180 50-87 (245)
185 d1gdha2 c.23.12.1 (A:2-100,A:2 24.6 14 0.0011 13.0 4.5 66 103-177 29-94 (129)
186 d2ax3a2 c.104.1.1 (A:1-211) Hy 24.3 15 0.0011 12.9 6.3 44 360-404 33-76 (211)
187 d1ddza2 c.53.2.1 (A:326-564) b 24.1 13 0.00092 13.4 1.1 21 163-183 114-135 (239)
188 d1a04a2 c.23.1.1 (A:5-142) Nit 24.0 15 0.0011 12.9 3.9 25 162-186 37-61 (138)
189 d2c42a1 c.36.1.8 (A:2-258) Pyr 24.0 15 0.0011 12.9 2.6 20 384-403 152-171 (257)
190 d2ae9a1 a.237.1.1 (A:1-76) The 24.0 12 0.00091 13.5 1.1 12 206-217 17-28 (76)
191 d2grea2 c.56.5.4 (A:3-73,A:187 23.9 15 0.0011 12.9 4.5 66 92-162 59-131 (233)
192 d1t5ia_ c.37.1.19 (A:) Spliceo 23.8 15 0.0011 12.9 8.1 73 80-160 16-88 (168)
193 d1s2ma2 c.37.1.19 (A:252-422) 23.7 15 0.0011 12.9 7.3 62 91-159 31-92 (171)
194 d2go7a1 c.108.1.6 (A:3-206) Hy 23.6 15 0.0011 12.9 9.7 137 30-180 39-181 (204)
195 d2z1aa2 d.159.1.2 (A:28-329) 5 23.3 15 0.0011 12.8 3.7 19 166-184 73-91 (302)
196 d1qdlb_ c.23.16.1 (B:) Anthran 23.2 15 0.0011 12.8 4.1 35 151-185 2-37 (195)
197 d1toaa_ c.92.2.2 (A:) Periplas 23.2 15 0.0011 12.8 4.7 52 106-159 6-61 (277)
198 d1v1qa_ b.40.4.3 (A:) Primosom 23.2 15 0.0011 12.8 10.1 53 540-594 53-106 (111)
199 d1jl3a_ c.44.1.1 (A:) Arsenate 23.1 15 0.0011 12.8 2.4 20 132-151 37-56 (137)
200 d1oj7a_ e.22.1.2 (A:) Hypothet 23.1 15 0.0011 12.8 2.9 32 189-222 172-203 (390)
201 d1i6pa_ c.53.2.1 (A:) beta-car 22.8 16 0.0011 12.7 1.7 13 90-102 31-43 (214)
202 d1vhca_ c.1.10.1 (A:) Hypothet 22.6 16 0.0011 12.7 5.8 90 83-182 5-95 (212)
203 d2eg6a1 c.1.9.4 (A:4-346) Dihy 22.6 16 0.0011 12.7 1.4 27 81-107 55-82 (343)
204 d1kwga2 c.1.8.1 (A:1-393) A4 b 22.4 16 0.0012 12.7 2.0 21 164-184 55-75 (393)
205 d2pl1a1 c.23.1.1 (A:1-119) Pho 22.3 16 0.0012 12.7 2.9 16 109-124 13-28 (119)
206 d2idob1 a.237.1.1 (B:2-76) Hom 22.3 14 0.001 13.1 1.1 11 207-217 18-28 (75)
207 d1d7ya2 c.3.1.5 (A:116-236) NA 22.0 16 0.0012 12.6 7.5 75 72-153 11-90 (121)
208 d2ji7a3 c.36.1.9 (A:370-552) O 21.9 16 0.0012 12.6 5.1 18 75-92 5-22 (183)
209 d1chua2 c.3.1.4 (A:2-237,A:354 21.8 16 0.0012 12.6 1.7 37 145-183 3-39 (305)
210 d1p90a_ c.55.5.2 (A:) NafY cor 21.6 16 0.0012 12.6 3.8 44 135-181 53-96 (123)
211 d1kola2 c.2.1.1 (A:161-355) Fo 21.5 16 0.0012 12.6 5.9 91 70-178 8-99 (195)
212 d1m5wa_ c.1.24.1 (A:) Pyridoxi 21.4 16 0.0012 12.5 7.7 63 112-177 78-151 (242)
213 d1bjta_ e.11.1.1 (A:) DNA topo 21.4 16 0.0012 12.5 2.3 27 92-118 100-126 (760)
214 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 21.3 17 0.0012 12.5 7.7 28 149-177 60-88 (89)
215 d1ybha1 c.31.1.3 (A:281-459) A 21.3 17 0.0012 12.5 8.9 77 80-161 7-95 (179)
216 d1j5wa_ d.104.1.1 (A:) Glycyl- 21.0 11 0.00081 13.9 0.3 92 80-176 5-103 (281)
217 d1mb3a_ c.23.1.1 (A:) Cell div 21.0 17 0.0012 12.5 2.2 54 93-160 2-55 (123)
218 d1jq5a_ e.22.1.2 (A:) Glycerol 20.9 17 0.0012 12.5 4.4 88 83-177 20-113 (366)
219 d2fzwa2 c.2.1.1 (A:163-338) Al 20.9 17 0.0012 12.5 6.9 34 89-127 26-59 (176)
220 d3pmga2 c.84.1.1 (A:191-303) P 20.8 17 0.0012 12.5 4.7 39 150-188 27-66 (113)
221 d1qo2a_ c.1.2.1 (A:) Phosphori 20.8 17 0.0012 12.4 5.9 68 112-181 35-103 (241)
222 d2c0ra1 c.67.1.4 (A:2-362) Pho 20.7 17 0.0012 12.4 4.3 55 412-467 300-360 (361)
223 d1sjpa2 c.8.5.1 (A:189-372) Gr 20.7 17 0.0012 12.4 4.8 100 74-183 35-139 (184)
224 d1vi6a_ c.23.15.1 (A:) Ribosom 20.6 17 0.0012 12.4 9.4 133 75-228 41-180 (193)
225 d1o2da_ e.22.1.2 (A:) Alcohol 20.6 17 0.0012 12.4 3.4 73 81-160 16-97 (359)
226 d1wl8a1 c.23.16.1 (A:1-188) GM 20.5 17 0.0012 12.4 3.8 34 153-186 3-37 (188)
227 d1y4ia1 c.67.1.3 (A:2-398) Met 20.3 17 0.0013 12.4 9.1 78 80-169 66-144 (397)
228 d1gpma2 c.23.16.1 (A:3-207) GM 20.1 17 0.0013 12.3 3.6 30 153-182 8-38 (205)
No 1
>d1ir6a_ c.107.1.2 (A:) Exonuclease RecJ {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=0 Score=802.87 Aligned_cols=381 Identities=31% Similarity=0.470 Sum_probs=346.7
Q ss_pred HHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 55614879999999999977997999940788615289999999997699479980787433668897898874202686
Q gi|254780901|r 72 PLILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQ 151 (600)
Q Consensus 72 P~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~ 151 (600)
++.|+||++|++||.+||+++|+|+|||||||||+||||||+++|+++|+++.||||+|++||||+|.+.++++.+ +++
T Consensus 4 ~~~l~~m~~A~~~i~~ai~~~e~I~I~gDyD~DGitS~aIl~~~L~~~g~~~~~~Ip~R~~eGyGl~~~~i~~~~~-~~~ 82 (385)
T d1ir6a_ 4 LLPLKGLREAAALLEEALRQGKRIRVHGDYDADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLMERVPEHLE-ASD 82 (385)
T ss_dssp CCCCTTHHHHHHHHHHHHHTTCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEECCCTTTSCSSCCGGGHHHHHT-TCS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHH-CCC
T ss_conf 7673589999999999997799799992778606799999999999889975998778665699868999999853-377
Q ss_pred EEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 89996488762345555541798279961544765556725652378888643344304788999999999997021488
Q gi|254780901|r 152 LIITVDCGSTSYDALQYATNQGIDVIVIDHHQVKSEEIPAYALVNPNRLDDLSGQGHLCAAGVVFLVLVLIYRILRQDNK 231 (600)
Q Consensus 152 LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~~~~~~p~a~aivNP~~~~~~~p~~~l~gaGvaf~l~~al~~~l~~~~~ 231 (600)
|||||||||++++++++++++|+||||||||+| .+.|++.+++||++.+ ++++++|||||||+|++++.+.+...
T Consensus 83 LiItvD~G~~~~e~i~~~~~~gi~vIv~DHH~~-~~~~~~~~iv~~~~~~--~~~~~~~gaGva~~l~~~l~~~~~~~-- 157 (385)
T d1ir6a_ 83 LFLTVDCGITNHAELRELLENGVEVIVTDHHTP-GKTPPPGLVVHPALTP--DLKEKPTGAGVAFLLLWALHERLGLP-- 157 (385)
T ss_dssp EEEESSCCTTCGGGHHHHTTSCCEEEEECCSCC-CSSCCSSEEECGGGST--TCCCCCCHHHHHHHHHHHHHHTTTCC--
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCEECCCCCCC-CCCCCHHHHHCCCCCC--CCHHCCCHHHHHHHHHHHHHHHHHHH--
T ss_conf 699823652203667667632872321465465-6574012121576788--50101302578999999886432442--
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH
Q ss_conf 76407799999998775420111144411899998788775168874357898708886424234566677430623331
Q gi|254780901|r 232 VPLNFDLLSLLDLVALATVCDVVPLIGLNRAYVVKGLMVARRQGNPGLKALIERVNISSPITAENLGYMIGPSINAGGRI 311 (600)
Q Consensus 232 ~~~~~~l~~~ldlvaiGTvaD~vpL~~eNR~lvk~GL~~l~~~~~~gl~~L~~~~~~~~~i~~~di~f~iaPrINAaGRl 311 (600)
++.+|++|||+|||||||||.++||++|+.||+.+++++++|+++|++..+.+ .+++||+|.|+|||||+|||
T Consensus 158 -----~~~~~l~L~aiGtiaD~~pL~~eNR~lv~~gl~~~~~~~~~g~~~L~~~~~~~--~~~~di~f~i~P~iNA~GRl 230 (385)
T d1ir6a_ 158 -----PPLEYADLAAVGTIADVAPLWGWNRALVKEGLARIPASSWVGLRLLAEAVGYT--GKAVEVAFRIAPRINAASRL 230 (385)
T ss_dssp -----CCGGGHHHHHHHHHHTTCCCSSHHHHHHHHHHHHCTTCSCHHHHHHHHHTTCC--SCSHHHHHTHHHHHHHHHHT
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC--CCHHHHHHHHHHHHCCCCCC
T ss_conf -----20244455456455455401367889987777785114558899997542213--20122111113111333444
Q ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 21222210020342589999999999899999999999999999998752112434750262057858122222278998
Q gi|254780901|r 312 GESNLGSRLLISDDSQELEMLAMKLDVLNQNRRLMESAMLEQAEAKVLTQCDDIQQASVIVVEGDRWHPGIVGLLAARLK 391 (600)
Q Consensus 312 ~~a~~av~lL~~~d~~~a~~la~~L~~lN~~Rk~~e~~i~~~a~~~~~~~~~~~~~~~~ivv~~~~wh~GViGIVAsrL~ 391 (600)
+++..+++||+++|.+++..++.+|+.+|++||+++++++++|.++.. +...++++++++||+||+|||||||+
T Consensus 231 ~~a~~a~~lL~~~~~~~a~~~a~~l~~~N~~Rk~~~~~i~~~a~~~~~------~~~~~i~~~~~~~~~GviGivAsrl~ 304 (385)
T d1ir6a_ 231 GEAEKALRLLLTDDAAEAQALVGELHRLNARRQTLEEAMLRKLLPQAD------PEAKAIVLLDPEGHPGVMGIVASRIL 304 (385)
T ss_dssp TCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCC------TTSSSEEEECTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CCCCEEEEECCCCCCCHHHHHHHHHH
T ss_conf 431021244441236789999999887777899999999999875430------33515999537766202204589999
Q ss_pred HHHHCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCHH
Q ss_conf 84201079988637983799986489861888888530335301156532223146422215889999999998622644
Q gi|254780901|r 392 EKFGRPSFAISFEEDGKGIGSGRSIEGFDIGKMVSFAVEEGILVKGGGHAMAAGLTVERVNFGRLCDFFQKFAHNIVPAL 471 (600)
Q Consensus 392 e~y~kP~iv~s~~~dg~~kGS~RSi~g~~l~~~l~~~~~~~ll~~~GGH~~AaG~ti~~~~l~~f~~~l~~~~~~~~~~~ 471 (600)
++|+||+++++. .|||+||++|+|+.++|+.|++ +|.+||||++|||||++++++++|+++|++++++.. +
T Consensus 305 ~~~~kP~iv~~~-----~kGS~Rs~~g~~l~~~l~~~~~--~l~~~GGH~~AaG~~i~~~~~~~F~~~l~~~~~~~~--~ 375 (385)
T d1ir6a_ 305 EATLRPVFLVAQ-----GKGTVRSLAPISAVEALRSAED--LLLRYGGHKEAAGFAMDEALFPAFKARVEAYAARFP--D 375 (385)
T ss_dssp HHHCSCEEEEET-----TEEEEECCSSCCHHHHHHTTGG--GCSEEEECSSEEEEECCGGGHHHHHHHHHHHHHSSC--C
T ss_pred HHCCCCEEEEEC-----CEEEEECCCCCCHHHHHHHHHC--HHHCCCCHHHCCEEEECHHHHHHHHHHHHHHHHHCC--C
T ss_conf 972997899966-----7387768999789999998745--301379916704679749899999999999998563--5
Q ss_pred HCCCCEEEE
Q ss_conf 337714760
Q gi|254780901|r 472 ITTPVFKID 480 (600)
Q Consensus 472 ~~~~~l~iD 480 (600)
..++...+|
T Consensus 376 ~~~~~~~~d 384 (385)
T d1ir6a_ 376 PVREVALLD 384 (385)
T ss_dssp TTTTCCSTT
T ss_pred CCCHHHHCC
T ss_conf 322044247
No 2
>d1wpna_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Bacillus subtilis [TaxId: 1423]}
Probab=97.93 E-value=1.9e-05 Score=59.05 Aligned_cols=146 Identities=18% Similarity=0.164 Sum_probs=80.5
Q ss_pred CCEEEEEC--CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC-------CCCCCHHHHHHHHHCCCCEEEEECCCCCCH
Q ss_conf 97999940--788615289999999997699479980787433-------668897898874202686899964887623
Q gi|254780901|r 93 EKIMIFGD--YDVDGAASVALMMRFLSHCSVNANMYIPDRIVD-------GYGPNPSLMEKFINEGAQLIITVDCGSTSY 163 (600)
Q Consensus 93 ekI~I~gD--yD~DGitstail~~~L~~~g~~v~~~IP~R~~e-------GYGl~~~~i~~~~~~g~~LiItvD~Gi~~~ 163 (600)
+||+|.|+ -|.|++.|+.-|+.+|+++|.++..+.+..... -.++....+........+.++.|||+....
T Consensus 1 ~kI~I~~H~~pD~DaigSalal~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD~~~~~~ 80 (187)
T d1wpna_ 1 EKILIFGHQNPDTDTICSAIAYADLKNKLGFNAEPVRLGQVNGETQYALDYFKQESPRLVETAANEVNGVILVDHNERQQ 80 (187)
T ss_dssp CCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEESSCCCHHHHHHHHHTTCCCCEECSCSTTTCSEEEEESCCCGGG
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHC
T ss_conf 94999359999868999999999999982998599988999978999998767754100011100011033115697210
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCCCC-EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 4555554179827996154476555672-565237888864334430478899999999999702148876407799999
Q gi|254780901|r 164 DALQYATNQGIDVIVIDHHQVKSEEIPA-YALVNPNRLDDLSGQGHLCAAGVVFLVLVLIYRILRQDNKVPLNFDLLSLL 242 (600)
Q Consensus 164 e~i~~a~~~GidvIVtDHH~~~~~~p~a-~aivNP~~~~~~~p~~~l~gaGvaf~l~~al~~~l~~~~~~~~~~~l~~~l 242 (600)
........-.++|+|||...+..... ..++.+. .=|.+-+.|.+++.. + .+....+.
T Consensus 81 --~~~~~~~~~~v~vIDHH~~~~~~~~~~~~~~~~~---------~sst~~iv~~l~~~~----~----~~i~~~~A--- 138 (187)
T d1wpna_ 81 --SIKDIEEVQVLEVIDHHRIANFETAEPLYYRAEP---------VGCTATILNKMYKEN----N----VKIEKEIA--- 138 (187)
T ss_dssp --SCTTGGGSEEEEEEECSCCCSCCCSSCCEEEECS---------SSCHHHHHHHHHHHT----T----CCCCHHHH---
T ss_pred --CHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCC---------CCCHHHHHHHHHHHH----C----CCCCHHHH---
T ss_conf --5567852684799824665566756631562586---------355999999999981----8----99999999---
Q ss_pred HHHHHHHHHCCCCCCCCC
Q ss_conf 998775420111144411
Q gi|254780901|r 243 DLVALATVCDVVPLIGLN 260 (600)
Q Consensus 243 dlvaiGTvaD~vpL~~eN 260 (600)
.+...|.+.|-.-+...|
T Consensus 139 ~~L~~gI~tDTg~F~~~~ 156 (187)
T d1wpna_ 139 GLMLSAIISDSLLFKSPT 156 (187)
T ss_dssp HHHHHHHHHHHTTTTSTT
T ss_pred HHHHHHHHHHHCCCCCCC
T ss_conf 999989999717677899
No 3
>d1k20a_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Streptococcus gordonii [TaxId: 1302]}
Probab=96.63 E-value=0.0027 Score=42.20 Aligned_cols=144 Identities=18% Similarity=0.201 Sum_probs=68.8
Q ss_pred CEEEEECC--CCCHHHHHHHHHHHHH-HCCCCEEEEECCCCC-------CCCCCCH-HHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 79999407--8861528999999999-769947998078743-------3668897-89887420268689996488762
Q gi|254780901|r 94 KIMIFGDY--DVDGAASVALMMRFLS-HCSVNANMYIPDRIV-------DGYGPNP-SLMEKFINEGAQLIITVDCGSTS 162 (600)
Q Consensus 94 kI~I~gDy--D~DGitstail~~~L~-~~g~~v~~~IP~R~~-------eGYGl~~-~~i~~~~~~g~~LiItvD~Gi~~ 162 (600)
||.|+|+- |.|++.|+.-+..+++ ..|.++..+...... +-+|+.. +.+........+.+|.||+...+
T Consensus 2 kIlV~GH~~pD~DsigSalala~~l~~~~g~~~~~~~~~~~~~e~~~~l~~~~i~~~~li~~~~~~~~~~vilVDhn~~~ 81 (310)
T d1k20a_ 2 KILVFGHQNPDSDAIGSSYAFAYLAREAYGLDTEAVALGEPNEETAFVLDYFGVAAPRVITSAKAEGAEQVILTDHNEFQ 81 (310)
T ss_dssp CEEEECCSSCCHHHHHHHHHHHHHHHHHHCCCEEECBSSCCCHHHHHHHHHHTCCCCCBCSCTGGGTCSEEEEESCCCGG
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEECCCCCHH
T ss_conf 39998899978199999999999999847997499989999869999997669961556532013457417983799833
Q ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCC-CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 345555541798279961544765556-7256523788886433443047889999999999970214887640779999
Q gi|254780901|r 163 YDALQYATNQGIDVIVIDHHQVKSEEI-PAYALVNPNRLDDLSGQGHLCAAGVVFLVLVLIYRILRQDNKVPLNFDLLSL 241 (600)
Q Consensus 163 ~e~i~~a~~~GidvIVtDHH~~~~~~p-~a~aivNP~~~~~~~p~~~l~gaGvaf~l~~al~~~l~~~~~~~~~~~l~~~ 241 (600)
... ....+ .--+.|+|||..++... ....+++|.. -|.+-+.+.++ +..+ .+....+..
T Consensus 82 ~~~-~~~~~-~~v~~iIDHH~~~~~~~~~~~~~~~~~~---------gSt~tlV~~~~----~~~~----~~i~~~~A~- 141 (310)
T d1k20a_ 82 QSV-ADIAE-VEVYGVVDHHRVANFETANPLYMRLEPV---------GSASSIVYRMF----KEHS----VAVSKEIAG- 141 (310)
T ss_dssp GSC-TTGGG-SEEEEEEECSCCCSCCCSSCCEEEECSS---------SCHHHHHHHHH----HHTT----CCCCHHHHH-
T ss_pred HHH-HHHHH-CCEEEEEEECCCCCCCCCCCEEEEECCC---------CCHHHHHHHHH----HHHC----CCCCHHHHH-
T ss_conf 334-56743-6618999730467766667428997786---------84999999999----9708----998999999-
Q ss_pred HHHHHHHHHHCCCCCCCC
Q ss_conf 999877542011114441
Q gi|254780901|r 242 LDLVALATVCDVVPLIGL 259 (600)
Q Consensus 242 ldlvaiGTvaD~vpL~~e 259 (600)
+...|.+.|-+-+...
T Consensus 142 --lLl~gIl~DT~~f~~~ 157 (310)
T d1k20a_ 142 --LMLSGLISDTLLLKSP 157 (310)
T ss_dssp --HHHHHHHHHHTTTTST
T ss_pred --HHHHHHHHHHCCCCCC
T ss_conf --8750585761767889
No 4
>d2pi2a1 b.40.4.3 (A:44-171) Replication protein A 32 KDa subunit (RPA32) fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.80 E-value=0.077 Score=30.76 Aligned_cols=83 Identities=16% Similarity=0.288 Sum_probs=61.7
Q ss_pred EEEECCEEEEEEEEECC--------CEEEEEEECCCCCEEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEEEEECCCCE
Q ss_conf 68427809988888479--------6499999849987799999778787012355306998799999976654578110
Q gi|254780901|r 510 VFAFPNHKLQSIRVVNL--------AHLQMTFESQDSETLQAIAFRVYGTPLGEFLMQSRGKRMHVTGHLCVNYWRGSKR 581 (600)
Q Consensus 510 ~F~~~~~~i~~~r~vGk--------~Hlkl~l~~~~g~~i~aI~Fn~~~~~~~~~~~~~~g~~idii~~l~~N~~~G~~s 581 (600)
.|.+.+..+...+.+|. ....+.+.|..|..+++.+|--.+....+......|..+.+.|+++ .|+|++
T Consensus 20 ~f~i~g~~v~~V~iVG~V~~i~~~~t~~~y~idDgTG~~i~v~~w~~~~~~~~~~~~i~~g~yVrV~G~lk--~f~~~~- 96 (128)
T d2pi2a1 20 VFRIGNVEISQVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLR--SFQNKK- 96 (128)
T ss_dssp EEEETTEEESEEEEEEEEEEEEECSSEEEEEEECSSSSCEEEEEECC-------CCCCCTTCEEEEEEEEE--EETTEE-
T ss_pred CEEECCEEEEEEEEEEEEEEEEECCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEE--EECCEE-
T ss_conf 78999999999999999989996587799999889999489999788887722143056898999999997--118858-
Q ss_pred EEEEEEEEEECCCCC
Q ss_conf 589999801113112
Q gi|254780901|r 582 CQLRVLDASPVEGHH 596 (600)
Q Consensus 582 ~QL~I~Di~p~e~~~ 596 (600)
|+.+..++|+++-+
T Consensus 97 -~i~~~~i~~v~d~N 110 (128)
T d2pi2a1 97 -SLVAFKIMPLEDMN 110 (128)
T ss_dssp -EEEEEEEEECSCTH
T ss_pred -EEEEEEEEEECCCC
T ss_conf -99999999937967
No 5
>d1x94a_ c.80.1.3 (A:) Phosphoheptose isomerase GmhA1 {Vibrio cholerae [TaxId: 666]}
Probab=92.28 E-value=0.29 Score=26.31 Aligned_cols=109 Identities=15% Similarity=0.237 Sum_probs=60.2
Q ss_pred CCHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH--HHHHHHHCCCC---EEEEECC------CCCCCCCCC
Q ss_conf 995561487999999999997799799994078861528999--99999976994---7998078------743366889
Q gi|254780901|r 70 PDPLILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVAL--MMRFLSHCSVN---ANMYIPD------RIVDGYGPN 138 (600)
Q Consensus 70 ~dP~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstai--l~~~L~~~g~~---v~~~IP~------R~~eGYGl~ 138 (600)
.+-..+..+++|++.+.++++++.+|.++| +-|-.+.|- ..+++..+... ....-.+ -+...+|..
T Consensus 22 ~~~~~~~~I~~aa~~i~~~~~~~~kI~~~G---~GgSa~~A~h~a~~~~~~~~~~~~~~~~~~~~~~~~~ta~~nd~~~~ 98 (191)
T d1x94a_ 22 SDDHNIAQIEAAAKLIADSFKQGGKVLSCG---NGGSHCDAMHFAEELTGRYRENRPGYPGIAISDPSHLSCVSNDFGYD 98 (191)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTTTCCEEEEC---SSSHHHHHHHHHHHHHHHHCTTCSSCSEEEC---------------C
T ss_pred HCHHHHHHHHHHHHHHHHHHHCCCEEEEEE---CCCCCCCHHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCHH
T ss_conf 455409999999999999998699799983---89875207578676025644223421011143166777765036607
Q ss_pred HHHHHH---HHHCCCCEEEEEC-CCCC--CHHHHHHHHHCCCCEEEECCC
Q ss_conf 789887---4202686899964-8876--234555554179827996154
Q gi|254780901|r 139 PSLMEK---FINEGAQLIITVD-CGST--SYDALQYATNQGIDVIVIDHH 182 (600)
Q Consensus 139 ~~~i~~---~~~~g~~LiItvD-~Gi~--~~e~i~~a~~~GidvIVtDHH 182 (600)
....+. ..+.| |++|..- .|.+ -.+++++|+++|+.||.+=--
T Consensus 99 ~~~~~~l~~~~~~g-Dvli~iS~SG~s~~ii~a~~~Ak~~g~~~i~it~~ 147 (191)
T d1x94a_ 99 YVFSRYVEAVGAKG-DVLFGLSTSGNSGNILKAIEAAKAKGMKTIALTGK 147 (191)
T ss_dssp CHHHHHHHHHCCTT-CEEEEEESSSCCHHHHHHHHHHHHHTCEEEEEEET
T ss_pred HHHHHHHHHHCCCC-CEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECC
T ss_conf 78888999828998-98999836875420012279998579769999568
No 6
>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}
Probab=91.48 E-value=0.42 Score=25.04 Aligned_cols=53 Identities=11% Similarity=0.143 Sum_probs=35.5
Q ss_pred HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC-CCCCC
Q ss_conf 9999999779979999407886152899999999976994799807874-33668
Q gi|254780901|r 83 RRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRI-VDGYG 136 (600)
Q Consensus 83 ~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~-~eGYG 136 (600)
+.|.+.+.+-+.|.|+|--+--+-.|-.+ .++|+..|.++..+-|+.- .+.+|
T Consensus 4 ~~i~~~L~~pksIAVVGaS~~~~k~g~~v-~~~L~~~g~~~~~v~~~~~~~~i~g 57 (136)
T d1iuka_ 4 QELRAYLSQAKTIAVLGAHKDPSRPAHYV-PRYLREQGYRVLPVNPRFQGEELFG 57 (136)
T ss_dssp HHHHHHHHHCCEEEEETCCSSTTSHHHHH-HHHHHHTTCEEEEECGGGTTSEETT
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCHHHH-HHHHHCCCCCCEEEEECCCCCEEEC
T ss_conf 99999985789699996469999736899-9999638997148873035433400
No 7
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=90.68 E-value=0.23 Score=27.11 Aligned_cols=81 Identities=16% Similarity=0.304 Sum_probs=47.7
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCC-------CCCCCCCCHHHHHHHHHCCCCEEEEECCCCC-C
Q ss_conf 7997999940788615289999999997699479980787-------4336688978988742026868999648876-2
Q gi|254780901|r 91 NSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDR-------IVDGYGPNPSLMEKFINEGAQLIITVDCGST-S 162 (600)
Q Consensus 91 ~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R-------~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~-~ 162 (600)
++++|+|+| . |.|+-++ .++|.+.|++|..+=.+. +.++--+.........-.+.+++|. =-|+. +
T Consensus 4 ~~K~v~ViG---l-G~sG~s~-a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~-SPGi~~~ 77 (93)
T d2jfga1 4 QGKNVVIIG---L-GLTGLSC-VDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWLMAADLIVA-SPGIALA 77 (93)
T ss_dssp TTCCEEEEC---C-SHHHHHH-HHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCCHHHHHHCSEEEE-CTTSCTT
T ss_pred CCCEEEEEE---E-CHHHHHH-HHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEECCCCHHHHCCCCEEEE-CCCCCCC
T ss_conf 899999996---7-8999999-99999779989996087682557898406515525663432225878998-8987999
Q ss_pred HHHHHHHHHCCCCEE
Q ss_conf 345555541798279
Q gi|254780901|r 163 YDALQYATNQGIDVI 177 (600)
Q Consensus 163 ~e~i~~a~~~GidvI 177 (600)
++.+.+|+++|+.||
T Consensus 78 ~~~~~~a~~~gi~ii 92 (93)
T d2jfga1 78 HPSLSAAADAGIEIV 92 (93)
T ss_dssp SHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHCCCCEE
T ss_conf 999999998699748
No 8
>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]}
Probab=90.48 E-value=0.55 Score=24.07 Aligned_cols=96 Identities=25% Similarity=0.278 Sum_probs=67.0
Q ss_pred HCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CHHHHHHHHHCCCCE
Q ss_conf 6148799999999999779979999407886152899999999976994799807874336688-978988742026868
Q gi|254780901|r 74 ILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGP-NPSLMEKFINEGAQL 152 (600)
Q Consensus 74 ~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl-~~~~i~~~~~~g~~L 152 (600)
++||+.+-++--..-++++=+++-|..-| -++.+-|...|..+..-...-.--|-|+ |+..++.+.++ .++
T Consensus 107 L~PD~~etl~Aae~Lv~eGF~VlpY~~~D-------~v~ak~Le~~Gc~avMPlgsPIGSg~Gl~n~~~l~~i~~~-~~v 178 (251)
T d1xm3a_ 107 LLPDPVETLKASEQLLEEGFIVLPYTSDD-------VVLARKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQ-AKV 178 (251)
T ss_dssp CCBCHHHHHHHHHHHHHTTCCEEEEECSC-------HHHHHHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHH-CSS
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEECCCC-------HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHC-CCC
T ss_conf 68887799999999986896799961789-------8999999874871388766454148875786799999861-896
Q ss_pred EEEECCCCCCHHHHHHHHHCCCCEE
Q ss_conf 9996488762345555541798279
Q gi|254780901|r 153 IITVDCGSTSYDALQYATNQGIDVI 177 (600)
Q Consensus 153 iItvD~Gi~~~e~i~~a~~~GidvI 177 (600)
-+.||-||..--....|.++|.|-+
T Consensus 179 PvIvDAGIG~pSdAa~AMElG~daV 203 (251)
T d1xm3a_ 179 PVIVDAGIGSPKDAAYAMELGADGV 203 (251)
T ss_dssp CBEEESCCCSHHHHHHHHHTTCSEE
T ss_pred CEEEECCCCCHHHHHHHHHCCCCEE
T ss_conf 6897358898899999997039999
No 9
>d1tk9a_ c.80.1.3 (A:) Phosphoheptose isomerase GmhA1 {Campylobacter jejuni [TaxId: 197]}
Probab=89.09 E-value=0.64 Score=23.58 Aligned_cols=105 Identities=15% Similarity=0.214 Sum_probs=58.2
Q ss_pred HCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH--HHHHHHHHCCCCE---EEEECC-C------CCCCCCCCHHH
Q ss_conf 6148799999999999779979999407886152899--9999999769947---998078-7------43366889789
Q gi|254780901|r 74 ILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVA--LMMRFLSHCSVNA---NMYIPD-R------IVDGYGPNPSL 141 (600)
Q Consensus 74 ~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitsta--il~~~L~~~g~~v---~~~IP~-R------~~eGYGl~~~~ 141 (600)
....++++++.+.++++++.||.++| .-|-.+.| .-.++...++.+- ...... . +.-.||...-.
T Consensus 24 ~~~~I~~~~~~i~~~l~~ggkI~~~G---nGgSa~~A~h~a~el~~~~~~~r~~l~~i~l~~~~a~~ta~~nd~~~e~~f 100 (188)
T d1tk9a_ 24 LKGQIAKVGELLCECLKKGGKILICG---NGGSAADAQHFAAELSGRYKKERKALAGIALTTDTSALSAIGNDYGFEFVF 100 (188)
T ss_dssp GHHHHHHHHHHHHHHHHTTCCEEEEE---STHHHHHHHHHHHHHHSCSSSCCCCCCEEESSCCHHHHHHHHHHTCGGGHH
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEC---CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 19999999999999998599899987---887522364777762587655544433425778612232323546779999
Q ss_pred HHHHHH--CCCCEEEEEC-CCCC--CHHHHHHHHHCCCCEEEECC
Q ss_conf 887420--2686899964-8876--23455555417982799615
Q gi|254780901|r 142 MEKFIN--EGAQLIITVD-CGST--SYDALQYATNQGIDVIVIDH 181 (600)
Q Consensus 142 i~~~~~--~g~~LiItvD-~Gi~--~~e~i~~a~~~GidvIVtDH 181 (600)
.+.+.. ..-|++|..- .|.+ =.+++++|+++|+.+|.+==
T Consensus 101 ~~ql~~~~~~gDili~iS~SG~S~nii~a~~~Ak~~g~~ti~ltg 145 (188)
T d1tk9a_ 101 SRQVEALGNEKDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSG 145 (188)
T ss_dssp HHHHHHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEC
T ss_conf 999998368884799953798881268888999851153899807
No 10
>d1x92a_ c.80.1.3 (A:) Phosphoheptose isomerase GmhA1 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=89.02 E-value=0.7 Score=23.26 Aligned_cols=101 Identities=20% Similarity=0.311 Sum_probs=56.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH--HHHHHHCCCC---EEEEEC-CC------CCCCCCCC---HH
Q ss_conf 4879999999999977997999940788615289999--9999976994---799807-87------43366889---78
Q gi|254780901|r 76 TDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALM--MRFLSHCSVN---ANMYIP-DR------IVDGYGPN---PS 140 (600)
Q Consensus 76 ~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail--~~~L~~~g~~---v~~~IP-~R------~~eGYGl~---~~ 140 (600)
..+++|++.|.++++++.||.++| .-|-.|+|-. .++.+.+..+ ...... +. ..-.||.. .+
T Consensus 26 ~~i~~a~~~i~~~~~~~~kif~~G---nGgSas~A~h~a~dl~~~~~~~r~~~~~i~l~~~~s~~ta~~Nd~g~~~~f~~ 102 (194)
T d1x92a_ 26 PYIEQASLVMVNALLNEGKILSCG---NGGSAGDAQHFSSELLNRFERERPSLPAVALTTDSSTITSIANDYSYNEVFSK 102 (194)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEC---STHHHHHHHHHHHHHHTCSSSCCCCCCEEETTCCHHHHHHHHHHTCGGGTTHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEC---CCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHCCCCCHHHHHHH
T ss_conf 999999999999998599799987---87627888888877642021344333122203424677764055679999999
Q ss_pred HHHHHHHCCCCEEEEEC-CCCCC--HHHHHHHHHCCCCEEEEC
Q ss_conf 98874202686899964-88762--345555541798279961
Q gi|254780901|r 141 LMEKFINEGAQLIITVD-CGSTS--YDALQYATNQGIDVIVID 180 (600)
Q Consensus 141 ~i~~~~~~g~~LiItvD-~Gi~~--~e~i~~a~~~GidvIVtD 180 (600)
-++.+...| +++|... .|.+. .+++++|+++|+.+|..=
T Consensus 103 ql~~~~~~g-Dvli~iS~SG~S~nvi~a~~~Ak~~g~~~i~lt 144 (194)
T d1x92a_ 103 QIRALGQPG-DVLLAISTSGNSANVIQAIQAAHDREMLVVALT 144 (194)
T ss_dssp HHHHHCCTT-CEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHCCCC-CEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEE
T ss_conf 999856899-589999668885135799999875384699998
No 11
>d1nria_ c.80.1.3 (A:) Hypothetical protein HI0754 {Haemophilus influenzae [TaxId: 727]}
Probab=87.86 E-value=0.82 Score=22.73 Aligned_cols=180 Identities=16% Similarity=0.207 Sum_probs=101.9
Q ss_pred HHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH-HH--HHHHHHHHCCC---CEEEEECCCC------CCC-CCCCH
Q ss_conf 561487999999999997799799994078861528-99--99999997699---4799807874------336-68897
Q gi|254780901|r 73 LILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAAS-VA--LMMRFLSHCSV---NANMYIPDRI------VDG-YGPNP 139 (600)
Q Consensus 73 ~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGits-ta--il~~~L~~~g~---~v~~~IP~R~------~eG-YGl~~ 139 (600)
..+++++++++.+.++++++-+|..+| + |.++ .+ .-.++...|+. .+.+.|.--. .|+ .+-..
T Consensus 41 ~~l~~I~~av~~i~~~l~~gGrl~y~G---~-GtSgrla~~dA~E~~ptf~~~~~~v~~~iagg~~al~~~~e~~ed~~~ 116 (248)
T d1nria_ 41 SCLPQISLAVEQIVQAFQQGGRLIYIG---A-GTSGRLGVLDASECPPTFGVSTEMVKGIIAGGECAIRHPVEGAEDNTK 116 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEEE---S-HHHHHHHHHHHHHHHHHHCCCTTSEEEEETTCTHHHHSCCTTGGGCTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEE---C-CCCCHHHHHHHHHCCCCCCCCCHHEEEEECCCHHHHHHHHHHCCCCHH
T ss_conf 979999999999999986398599982---6-853028998998707756888034011001581888743641156579
Q ss_pred HHHHHHHHC---CCCEEEEECC-CCC--CHHHHHHHHHCCCCEEEECCCCCCCCCC-CCEEEECCCCCCCCCCCCCHHHH
Q ss_conf 898874202---6868999648-876--2345555541798279961544765556-72565237888864334430478
Q gi|254780901|r 140 SLMEKFINE---GAQLIITVDC-GST--SYDALQYATNQGIDVIVIDHHQVKSEEI-PAYALVNPNRLDDLSGQGHLCAA 212 (600)
Q Consensus 140 ~~i~~~~~~---g~~LiItvD~-Gi~--~~e~i~~a~~~GidvIVtDHH~~~~~~p-~a~aivNP~~~~~~~p~~~l~ga 212 (600)
....++.+. .-|++|.+=+ |.+ -..++++|+++|+.+|-+=... ..++. .++..|+|.-...-.--..=..+
T Consensus 117 ~~~~~l~~~~~~~~DvvIgISaSG~Tp~vl~al~~Ak~~Ga~ti~i~~n~-~s~l~~~ad~~I~~~~GpEv~~gstr~ka 195 (248)
T d1nria_ 117 AVLNDLQSIHFSKNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNP-KSEMAEIADIAIETIVGPEILTGSSRLKS 195 (248)
T ss_dssp HHHHHHHHTTCCTTSEEEEECTTSCCHHHHHHHHHHHHHTCEEEEEESST-TCHHHHHSSEEEECCCCSCSSTTCTTTHH
T ss_pred HHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCC-CHHCCCCCCEEEEECCCHHHHHCCCCHHH
T ss_conf 99989986488823179998259886334899999876286507986278-30103233403663467377633432346
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCCCCCCHHHHHHHHHHHHH
Q ss_conf 8999999999997021488764077999999987754201--111444118999987887751
Q gi|254780901|r 213 GVVFLVLVLIYRILRQDNKVPLNFDLLSLLDLVALATVCD--VVPLIGLNRAYVVKGLMVARR 273 (600)
Q Consensus 213 Gvaf~l~~al~~~l~~~~~~~~~~~l~~~ldlvaiGTvaD--~vpL~~eNR~lvk~GL~~l~~ 273 (600)
|.|=|++.-+. .-.-.+-+|-|=+ ||.|.-.|.-|.....+.+.+
T Consensus 196 gtaqK~iLn~i----------------sT~~mi~lGkv~~n~Mvd~~~~N~KL~~Ra~~i~~~ 242 (248)
T d1nria_ 196 GTAQKMVLNML----------------TTASMILLGKCYENLMVDVQASNEKLKARAVRIVMQ 242 (248)
T ss_dssp HHHHHHHHHHH----------------HHHHHHHTTSCBTTBCTTCCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH----------------HHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf 68999999999----------------999999853131371564113248899999999999
No 12
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=86.35 E-value=0.56 Score=24.06 Aligned_cols=77 Identities=19% Similarity=0.308 Sum_probs=50.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHC----CCCEEEEECCCCCCHHHH
Q ss_conf 7997999940788615289999999997699479980787433668897898874202----686899964887623455
Q gi|254780901|r 91 NSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINE----GAQLIITVDCGSTSYDAL 166 (600)
Q Consensus 91 ~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~----g~~LiItvD~Gi~~~e~i 166 (600)
++.+|++.||+ .-++.| +..+|..+|.++...-|. +|.+..+.++.+.+. +...-++-| -.+++
T Consensus 3 ~gl~Ia~VGD~---~nv~~S-li~~l~~~g~~v~~~~P~----~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~ea~ 70 (163)
T d1pvva2 3 KGVKVVYVGDG---NNVAHS-LMIAGTKLGADVVVATPE----GYEPDEKVIKWAEQNAAESGGSFELLHD----PVKAV 70 (163)
T ss_dssp TTCEEEEESCC---CHHHHH-HHHHHHHTTCEEEEECCT----TCCCCHHHHHHHHHHHHHHTCEEEEESC----HHHHT
T ss_pred CCCEEEEECCC---CHHHHH-HHHHHHHCCCEEEEECCC----CCCCCHHHHHHHHHHHHCCCCEEEEECC----HHHHH
T ss_conf 89999998897---189999-999999859948973650----0278768999998751035550899659----89986
Q ss_pred HHHHHCCCCEEEECCCCC
Q ss_conf 555417982799615447
Q gi|254780901|r 167 QYATNQGIDVIVIDHHQV 184 (600)
Q Consensus 167 ~~a~~~GidvIVtDHH~~ 184 (600)
.+.|||.||.-..
T Consensus 71 -----~~adviy~~~~~~ 83 (163)
T d1pvva2 71 -----KDADVIYTDVWAS 83 (163)
T ss_dssp -----TTCSEEEECCCCC
T ss_pred -----HHCCEEEECCEEE
T ss_conf -----1444885411221
No 13
>d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]}
Probab=84.78 E-value=0.68 Score=23.40 Aligned_cols=73 Identities=15% Similarity=0.261 Sum_probs=55.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECC--CCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHH-HHH
Q ss_conf 799994078861528999999999769947998078--7433668897898874202686899964887623455-555
Q gi|254780901|r 94 KIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPD--RIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDAL-QYA 169 (600)
Q Consensus 94 kI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~--R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i-~~a 169 (600)
||+..| |+=|-++--.+.+.|..+..++.+.|-| -...|+|+++...+++.+.|++.| |.-|=+=+..++ ++.
T Consensus 2 kILfiG--DIvG~~Gr~~v~~~Lp~lk~~~DfVIaNgENaa~G~Git~~~~~~l~~~GvDvi-T~GNH~wdkkei~~~i 77 (255)
T d1t70a_ 2 RVLFIG--DVFGQPGRRVLQNHLPTIRPQFDFVIVNMENSAGGFGMHRDAARGALEAGAGCL-TLGNHAWHHKDIYPML 77 (255)
T ss_dssp EEEEEC--CBBHHHHHHHHHHHHHHHGGGCSEEEEECTBTTTTSSCCHHHHHHHHHHTCSEE-ECCTTTTSSTTHHHHH
T ss_pred EEEEEE--CCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEE-ECCCHHHCCHHHHHHH
T ss_conf 299995--178988999999872887863888999875578884899999999997678678-7372333023578988
No 14
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=84.64 E-value=1.2 Score=21.54 Aligned_cols=91 Identities=7% Similarity=0.115 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEC
Q ss_conf 79999999999977997999940788615289999999997699479980787433668897898874202686899964
Q gi|254780901|r 78 CDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVD 157 (600)
Q Consensus 78 m~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD 157 (600)
++.-+..|.+.+++++++.|| |--...+-.+...|+..|..+.++-.+.-.+ --..+++++.+...+++|+.|
T Consensus 17 vd~ll~~i~~~~~~~~~~iif----~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~---eR~~~l~~Fr~g~~~vLVaTd 89 (181)
T d1t5la2 17 IDDLIGEIRERVERNERTLVT----TLTKKMAEDLTDYLKEAGIKVAYLHSEIKTL---ERIEIIRDLRLGKYDVLVGIN 89 (181)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE----CSSHHHHHHHHHHHHTTTCCEEEECSSCCHH---HHHHHHHHHHHTSCSEEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEEE----EEHHHHHHHHHHHHHHCCCCEEEECCCCCHH---HHHHHHHHHHCCCCCEEEEHH
T ss_conf 999999999999629828999----6103466788887876794046741786388---999999999789988897624
Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCC
Q ss_conf 88762345555541798279961544765556725652378
Q gi|254780901|r 158 CGSTSYDALQYATNQGIDVIVIDHHQVKSEEIPAYALVNPN 198 (600)
Q Consensus 158 ~Gi~~~e~i~~a~~~GidvIVtDHH~~~~~~p~a~aivNP~ 198 (600)
. .+.|+|+ |....|||=.
T Consensus 90 v-----------~~rGiDi------------p~v~~VI~~d 107 (181)
T d1t5la2 90 L-----------LREGLDI------------PEVSLVAILD 107 (181)
T ss_dssp C-----------CSSSCCC------------TTEEEEEETT
T ss_pred H-----------HHCCCCC------------CCCCEEEEEC
T ss_conf 7-----------7713899------------9978899956
No 15
>d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]}
Probab=84.18 E-value=0.98 Score=22.12 Aligned_cols=75 Identities=12% Similarity=0.209 Sum_probs=55.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECC--CCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHH-HHHH
Q ss_conf 799994078861528999999999769947998078--7433668897898874202686899964887623455-5554
Q gi|254780901|r 94 KIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPD--RIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDAL-QYAT 170 (600)
Q Consensus 94 kI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~--R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i-~~a~ 170 (600)
||+..| |+=|-++--.+.+.|..+..++.+.|-| -...|+|++++..+++.+.|++.| |.-|=+=+..++ ++..
T Consensus 2 kiLfiG--DIvG~~Gr~~v~~~Lp~Lk~~~DfVIaNgENaa~G~Git~k~~~~L~~~GVDvI-T~GNH~wdkkei~~~i~ 78 (252)
T d2z06a1 2 RVLFIG--DVMAEPGLRAVGLHLPDIRDRYDLVIANGENAARGKGLDRRSYRLLREAGVDLV-SLGNHAWDHKEVYALLE 78 (252)
T ss_dssp EEEEEC--CBCHHHHHHHHHHHHHHHGGGCSEEEEECTTTTTTSSCCHHHHHHHHHHTCCEE-ECCTTTTSCTTHHHHHH
T ss_pred EEEEEE--CCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEE-ECCCCCCCCHHHHHHHC
T ss_conf 099996--068988999999876777851888999621368883899999999997079789-74750124345566640
Q ss_pred H
Q ss_conf 1
Q gi|254780901|r 171 N 171 (600)
Q Consensus 171 ~ 171 (600)
+
T Consensus 79 ~ 79 (252)
T d2z06a1 79 S 79 (252)
T ss_dssp H
T ss_pred C
T ss_conf 2
No 16
>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.86 E-value=0.74 Score=23.10 Aligned_cols=76 Identities=18% Similarity=0.298 Sum_probs=48.6
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHH----HHCCCCEEEEECCCCCCHHHH
Q ss_conf 7997999940788615289999999997699479980787433668897898874----202686899964887623455
Q gi|254780901|r 91 NSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKF----INEGAQLIITVDCGSTSYDAL 166 (600)
Q Consensus 91 ~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~----~~~g~~LiItvD~Gi~~~e~i 166 (600)
++.+|+++||. -. ++ --+.+++..+|.++.+..|.. |.+..+.++.. .+.|.+..+|-|. .+
T Consensus 3 ~gl~I~~vGD~--~n-V~-~Sli~~~~~~g~~~~~~~P~~----~~p~~~~~~~~~~~~~~~~~~i~~~~d~----~~-- 68 (170)
T d1otha2 3 KGLTLSWIGDG--NN-IL-HSIMMSAAKFGMHLQAATPKG----YEPDASVTKLAEQYAKENGTKLLLTNDP----LE-- 68 (170)
T ss_dssp TTCEEEEESCS--SH-HH-HHHHTTTGGGTCEEEEECCTT----CCCCHHHHHHHHHHHHHHTCCEEEESCH----HH--
T ss_pred CCCEEEEECCC--HH-HH-HHHHHHHHHCCCEEEEEECCC----CCCCHHHHHHHHHHHHCCCCEEEEECCH----HH--
T ss_conf 89999998375--64-89-999999998699799973432----4786688999999875169979998599----99--
Q ss_pred HHHHHCCCCEEEECCCC
Q ss_conf 55541798279961544
Q gi|254780901|r 167 QYATNQGIDVIVIDHHQ 183 (600)
Q Consensus 167 ~~a~~~GidvIVtDHH~ 183 (600)
.-.+.|+|.||-=.
T Consensus 69 ---~~~~advi~~~~~~ 82 (170)
T d1otha2 69 ---AAHGGNVLITDTWI 82 (170)
T ss_dssp ---HHTTCSEEEECCSS
T ss_pred ---HHHHHHHEEEECEE
T ss_conf ---97461232530104
No 17
>d1ozha1 c.31.1.3 (A:188-366) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]}
Probab=82.69 E-value=1.4 Score=20.97 Aligned_cols=132 Identities=13% Similarity=0.189 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEE------EECCC---CCCC-CCC-CHHHHHHHHHC
Q ss_conf 9999999999779979999407886152899999999976994799------80787---4336-688-97898874202
Q gi|254780901|r 80 KAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANM------YIPDR---IVDG-YGP-NPSLMEKFINE 148 (600)
Q Consensus 80 ~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~------~IP~R---~~eG-YGl-~~~~i~~~~~~ 148 (600)
.+++++.+.|.+-++.+|+....+...-+..-+.++...+|+.|.. .+|.. .--| +|. ......++.+
T Consensus 8 ~~i~~~~~~L~~AkrPvii~G~g~~~~~a~~~l~~lae~~giPv~tt~~~~g~~~~~~~~~~~G~~g~~~~~~~~~~~~- 86 (179)
T d1ozha1 8 DAIDQVAKLIAQAKNPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQAAGAVNQDNFSRFAGRVGLFNNQAGDRLLQ- 86 (179)
T ss_dssp HHHHHHHHHHHHCSSEEEEECGGGGSGGGHHHHHHHHHHHCCCEEECGGGTTTCCTTTCTTEEEECSSBTTCHHHHHHH-
T ss_pred HHHHHHHHHHHHCCCEEEEECHHHCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC-
T ss_conf 9999999999967997999851127130899999999743624896044432456553200001357655577764431-
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 68689996488762345555541798279961544765556725652378888643344304788999999999997021
Q gi|254780901|r 149 GAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQVKSEEIPAYALVNPNRLDDLSGQGHLCAAGVVFLVLVLIYRILRQ 228 (600)
Q Consensus 149 g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~~~~~~p~a~aivNP~~~~~~~p~~~l~gaGvaf~l~~al~~~l~~ 228 (600)
.++|||.+.+....+..-.+ ...+..||-+| ++|...+-.|+. +++=+|=+-.++.+|.+.+..
T Consensus 87 ~aDlvl~vG~~~~~~~~~~~-~~~~~kvI~id--------------~d~~~i~~~~~~-d~~i~gD~~~~l~~L~~~l~~ 150 (179)
T d1ozha1 87 LADLVICIGYSPVEYEPAMW-NSGNATLVHID--------------VLPAYEERNYTP-DVELVGDIAGTLNKLAQNIDH 150 (179)
T ss_dssp HCSEEEEESCCGGGSCGGGT-CCSCSEEEEEE--------------SSCCCCBTTBCC-SEEEESCHHHHHHHHHHTCCS
T ss_pred CCCCEEEECCCCCCCCCCCC-CCCCCCEEEEE--------------CCHHHCCCCCCC-CEEEEECHHHHHHHHHHHHHC
T ss_conf 56626997246553334453-42356089995--------------606641776689-727982899999999996433
No 18
>d1u9ya1 c.61.1.2 (A:1-155) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=82.52 E-value=1.4 Score=20.92 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=54.0
Q ss_pred CCCEEEEE-CCCC-CHHHHHHHHHHHHHHCCC-CEEEEEC--------CCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 99799994-0788-615289999999997699-4799807--------87433668897898874202686899964887
Q gi|254780901|r 92 SEKIMIFG-DYDV-DGAASVALMMRFLSHCSV-NANMYIP--------DRIVDGYGPNPSLMEKFINEGAQLIITVDCGS 160 (600)
Q Consensus 92 ~ekI~I~g-DyD~-DGitstail~~~L~~~g~-~v~~~IP--------~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi 160 (600)
++.+.|+. -++. |-+.-..++..+++..|+ ++...|| .|+..|--++...+.++.+.|++-|||+|--.
T Consensus 47 g~~vvvi~s~~~~~d~lmelll~~da~~~~~a~~I~~ViPY~~YaRQDr~~~~ge~iSak~va~ll~~g~d~iitvDlH~ 126 (155)
T d1u9ya1 47 DDEAVIINTQKNQNDAIVETILLCDALRDEGVKKITLVAPYLAYARQDKKFNPGEAISIRALAKIYSNIVDKLITINPHE 126 (155)
T ss_dssp SSEEEEECCCSSHHHHHHHHHHHHHHHHTTTCCEEEEECSSCTTCSCSSCSSTTBCCHHHHHHHHHHHHCSEEEEESCSC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf 86568870566656378899999999998478604784043032003312389975218999999864027159971785
Q ss_pred CC
Q ss_conf 62
Q gi|254780901|r 161 TS 162 (600)
Q Consensus 161 ~~ 162 (600)
..
T Consensus 127 ~~ 128 (155)
T d1u9ya1 127 TH 128 (155)
T ss_dssp GG
T ss_pred HH
T ss_conf 78
No 19
>d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=81.33 E-value=1.5 Score=20.66 Aligned_cols=76 Identities=21% Similarity=0.233 Sum_probs=53.4
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHC----CCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHH-
Q ss_conf 79979999407886152899999999976----9947998078743366889789887420268689996488762345-
Q gi|254780901|r 91 NSEKIMIFGDYDVDGAASVALMMRFLSHC----SVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDA- 165 (600)
Q Consensus 91 ~~ekI~I~gDyD~DGitstail~~~L~~~----g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~- 165 (600)
+.=||+..| |+=|-++--.+.+.|..+ ++++...=-.-...|+|++++..+++.+.|++.| |.-|=+=+..+
T Consensus 3 ~~MkILfiG--DIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Git~k~~~eL~~~GvDvI-T~GNH~wd~kei 79 (281)
T d1t71a_ 3 NSIKFIFLG--DVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKEAGVNYI-TMGNHTWFQKLD 79 (281)
T ss_dssp CCCEEEEEC--EEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHHHTCCEE-ECCTTTTCCGGG
T ss_pred CCCEEEEEE--CCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEE-ECCCHHHHCHHH
T ss_conf 654699997--16888899999998399999719999998876578993989999999997078679-757245533142
Q ss_pred HHHH
Q ss_conf 5555
Q gi|254780901|r 166 LQYA 169 (600)
Q Consensus 166 i~~a 169 (600)
+.+.
T Consensus 80 ~~~i 83 (281)
T d1t71a_ 80 LAVV 83 (281)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 7877
No 20
>d1usga_ c.93.1.1 (A:) Leucine-binding protein {Escherichia coli [TaxId: 562]}
Probab=80.80 E-value=1.6 Score=20.49 Aligned_cols=84 Identities=14% Similarity=0.142 Sum_probs=38.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEE--CCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 997999940788615289999999997699479980--787433668897898874202686899964887623455555
Q gi|254780901|r 92 SEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYI--PDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYA 169 (600)
Q Consensus 92 ~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~I--P~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a 169 (600)
.+++.|+.+.+..|...+..+.+.++..|.++.... |....+ -...+.+++..+++.|+.+-.+.....-+..+
T Consensus 138 ~~~v~i~~~~~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~~~d----~~~~~~~i~~~~~d~v~~~~~~~~~~~~~~~~ 213 (346)
T d1usga_ 138 PQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKD----FSALIARLKKENIDFVYYGGYYPEMGQMLRQA 213 (346)
T ss_dssp CSSEEEEECSSHHHHHHHHHHHHHHHHTTCCEEEEEECCTTCCC----CHHHHHHHHHTTCCEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC----HHHHHHHHHCCCCCEEEEECCCHHHHHEEECC
T ss_conf 51257732740464999998765541344227988734710010----03577786446987899956636665413001
Q ss_pred HHCCCCEEEE
Q ss_conf 4179827996
Q gi|254780901|r 170 TNQGIDVIVI 179 (600)
Q Consensus 170 ~~~GidvIVt 179 (600)
++.|++..+.
T Consensus 214 ~~~g~~~~~~ 223 (346)
T d1usga_ 214 RSVGLKTQFM 223 (346)
T ss_dssp HHTTCCCEEE
T ss_pred CCCCCCCEEE
T ss_conf 2445564277
No 21
>d1thfd_ c.1.2.1 (D:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]}
Probab=79.67 E-value=1.7 Score=20.22 Aligned_cols=72 Identities=18% Similarity=0.253 Sum_probs=50.0
Q ss_pred HHHHHHHCCCCEEEE-ECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 999999769947998-0787433668897898874202686899964887623455555417982799615447
Q gi|254780901|r 112 MMRFLSHCSVNANMY-IPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQV 184 (600)
Q Consensus 112 l~~~L~~~g~~v~~~-IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~~ 184 (600)
+.+.+...|++--+. =.++..+|...+.+.++++.+. +.+=++++-|+.+.+.++.+-+.|.+=||..-...
T Consensus 35 ~a~~~~~~g~dei~ivDld~~~~~~~~~~~~i~~i~~~-~~~pi~vgGGIr~~e~i~~~l~~Ga~kviigs~~~ 107 (253)
T d1thfd_ 35 LGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ-IDIPFTVGGGIHDFETASELILRGADKVSINTAAV 107 (253)
T ss_dssp HHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHC-CCCCCEEECCCCCCHHHHHHHHCCCCEEEECHHHH
T ss_conf 99999986999899975213224763479999999841-57300243030001244667862898999874885
No 22
>d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=79.54 E-value=1.7 Score=20.20 Aligned_cols=78 Identities=19% Similarity=0.318 Sum_probs=54.2
Q ss_pred CCCCEEEEECCCCC-HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 79979999407886-15289999999997699479980787433668897898874202686899964887623455555
Q gi|254780901|r 91 NSEKIMIFGDYDVD-GAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYA 169 (600)
Q Consensus 91 ~~ekI~I~gDyD~D-Gitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a 169 (600)
++-+|+++|| .. +=++-+ +...+..+|.++....|. +|-+.....+.+.+.+.+..++-|. .+++
T Consensus 3 ~gl~i~~vGD--~~~srV~~S-li~~~~~~g~~~~~~~P~----~~~~~~~~~~~~~~~~~~~~~~~d~----~~av--- 68 (157)
T d1ml4a2 3 DGLKIGLLGD--LKYGRTVHS-LAEALTFYDVELYLISPE----LLRMPRHIVEELREKGMKVVETTTL----EDVI--- 68 (157)
T ss_dssp SSEEEEEESC--TTTCHHHHH-HHHHGGGSCEEEEEECCG----GGCCCHHHHHHHHHTTCCEEEESCT----HHHH---
T ss_pred CCCEEEEECC--CCCCHHHHH-HHHHHHHCCCCEEEECCC----HHHCCHHHHHHHHHHCCCCEEECCH----HHHH---
T ss_conf 8999999847--866759999-999999669847997162----1101167787777641464142588----7852---
Q ss_pred HHCCCCEEEECCCCC
Q ss_conf 417982799615447
Q gi|254780901|r 170 TNQGIDVIVIDHHQV 184 (600)
Q Consensus 170 ~~~GidvIVtDHH~~ 184 (600)
.+.|||.||--.-
T Consensus 69 --~~aDvvy~~~~~~ 81 (157)
T d1ml4a2 69 --GKLDVLYVTRIQK 81 (157)
T ss_dssp --TTCSEEEECCCCG
T ss_pred --CCCCEEEEECCCC
T ss_conf --4381899643334
No 23
>d2fywa1 c.135.1.1 (A:1-265) Hypothetical protein SP1609 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=79.14 E-value=1.4 Score=20.86 Aligned_cols=30 Identities=20% Similarity=0.560 Sum_probs=23.7
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEEEECCC
Q ss_conf 868999648876234555554179827996154
Q gi|254780901|r 150 AQLIITVDCGSTSYDALQYATNQGIDVIVIDHH 182 (600)
Q Consensus 150 ~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH 182 (600)
.+.++|+|. ..+-++.|.+.|.|+|||-|-
T Consensus 37 ~kI~v~lD~---t~~vi~~Ai~~~adlIItHHp 66 (265)
T d2fywa1 37 QRVMVALDI---REETVAEAIEKGVDLIIVKHA 66 (265)
T ss_dssp SEEEEESCC---CHHHHHHHHHTTCSEEEESSC
T ss_pred CEEEEEECC---CHHHHHHHHHCCCCEEEECCC
T ss_conf 789999729---999999999769998996278
No 24
>d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]}
Probab=79.10 E-value=1.2 Score=21.48 Aligned_cols=28 Identities=14% Similarity=0.336 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf 6234555554179827996154476555
Q gi|254780901|r 161 TSYDALQYATNQGIDVIVIDHHQVKSEE 188 (600)
Q Consensus 161 ~~~e~i~~a~~~GidvIVtDHH~~~~~~ 188 (600)
++.++...|.+.|.+.|=+|=|.-.+..
T Consensus 16 NT~~a~~~a~~~G~~~iE~DV~~TkDg~ 43 (217)
T d1vd6a1 16 NTLESFRLALEAGLDGVELDVWPTRDGV 43 (217)
T ss_dssp TSHHHHHHHHHTTCSEEEEEEEECTTSC
T ss_pred HHHHHHHHHHHCCCCEEEEEEEEECCCC
T ss_conf 0599999999859898999888955998
No 25
>d1dkua1 c.61.1.2 (A:8-166) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]}
Probab=77.69 E-value=1.9 Score=19.80 Aligned_cols=72 Identities=18% Similarity=0.253 Sum_probs=52.5
Q ss_pred CCCEEEEEC-CC--CCHHHHHHHHHHHHHHCCCC-EEEEECC--------CCCCCCCCCHHHHHHHHH-CCCCEEEEECC
Q ss_conf 997999940-78--86152899999999976994-7998078--------743366889789887420-26868999648
Q gi|254780901|r 92 SEKIMIFGD-YD--VDGAASVALMMRFLSHCSVN-ANMYIPD--------RIVDGYGPNPSLMEKFIN-EGAQLIITVDC 158 (600)
Q Consensus 92 ~ekI~I~gD-yD--~DGitstail~~~L~~~g~~-v~~~IP~--------R~~eGYGl~~~~i~~~~~-~g~~LiItvD~ 158 (600)
++.+.|... +. -|-+.-.-++..+++..|++ +...+|- |+..|=.++...+-++.+ .|++-|||+|-
T Consensus 48 g~dv~ivqs~~~~~nd~lmelll~~~a~k~~~A~~i~~ViPY~~YsRQDr~~~~ge~isak~vA~lL~~~G~d~vitvDl 127 (159)
T d1dkua1 48 GCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDRKARSREPITAKLFANLLETAGATRVIALDL 127 (159)
T ss_dssp TCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTCSEEEEEESSCTTTTCCSCSSTTCCCHHHHHHHHHHHHTCCEEEEESC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCEEHHHHHHHHHHCCCCEEEEECC
T ss_conf 88508986388883789999999999999757762078602121101012348998523999863676418762688527
Q ss_pred CCCCH
Q ss_conf 87623
Q gi|254780901|r 159 GSTSY 163 (600)
Q Consensus 159 Gi~~~ 163 (600)
-....
T Consensus 128 H~~~i 132 (159)
T d1dkua1 128 HAPQI 132 (159)
T ss_dssp SSGGG
T ss_pred CCHHH
T ss_conf 85887
No 26
>d1ka9f_ c.1.2.1 (F:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]}
Probab=77.34 E-value=1.4 Score=20.91 Aligned_cols=72 Identities=11% Similarity=0.150 Sum_probs=50.9
Q ss_pred HHHHHHHCCCCEEEEE-CCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 9999997699479980-787433668897898874202686899964887623455555417982799615447
Q gi|254780901|r 112 MMRFLSHCSVNANMYI-PDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQV 184 (600)
Q Consensus 112 l~~~L~~~g~~v~~~I-P~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~~ 184 (600)
+.+.+...|++--+++ -++..++.+.+.+.++++.+. +.+-++++.|+.+.+.++.+-+.|.+=||+.....
T Consensus 35 ~a~~~~~~g~dei~iiDl~~~~~~~~~~~~~i~~i~~~-~~~pi~vgGGIrs~e~~~~ll~~Ga~kVii~s~~~ 107 (251)
T d1ka9f_ 35 AARAYDEAGADELVFLDISATHEERAILLDVVARVAER-VFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAV 107 (251)
T ss_dssp HHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTT-CCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC-CCCCHHEECCCCCHHHHHHHHHCCCCEEEECCHHH
T ss_conf 99999986999899984445212331678999988860-48512101153478888899974897799894454
No 27
>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}
Probab=77.25 E-value=1.8 Score=20.00 Aligned_cols=52 Identities=13% Similarity=0.172 Sum_probs=38.3
Q ss_pred HHHCCCHHHHHHHHHHH-HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 55614879999999999-9779979999407886152899999999976994799
Q gi|254780901|r 72 PLILTDCDKAARRIVQA-IYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANM 125 (600)
Q Consensus 72 P~~l~dm~~A~~ri~~a-i~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~ 125 (600)
|+-|++.++..+.+.+. |.++..|+||. |..|..+++-++-.|+.+|.+|..
T Consensus 68 ~~~lP~~~~~~~~l~~lGI~~~~~VVvYd--~~~g~~~A~R~~w~L~~~G~~v~i 120 (156)
T d1okga1 68 RHPLPPCAEFIDWCMANGMAGELPVLCYD--DECGAMGGCRLWWMLNSLGADAYV 120 (156)
T ss_dssp SSCCCCHHHHHHHHHHTTCSSSSCEEEEC--SSTTTTTHHHHHHHHHHHTCCEEE
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCEEEEEE--CCCCCHHHHHHHHHHHHCCCEEEE
T ss_conf 65668989999998741246772499980--788830878999999983984699
No 28
>d1dxya2 c.23.12.1 (A:1-100,A:300-330) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}
Probab=76.71 E-value=2.1 Score=19.60 Aligned_cols=106 Identities=12% Similarity=0.180 Sum_probs=47.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC----------------CCCCCHHHHHHHHHCCCCEEEEEC
Q ss_conf 7999940788615289999999997699479980787433----------------668897898874202686899964
Q gi|254780901|r 94 KIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVD----------------GYGPNPSLMEKFINEGAQLIITVD 157 (600)
Q Consensus 94 kI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~e----------------GYGl~~~~i~~~~~~g~~LiItvD 157 (600)
||++|+.++.|. ..+-++.+.++.++.++ |+..++ ..-++.+.++.++..+.++|.+.-
T Consensus 2 KIl~~~~~~~e~----~~l~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~d~ii~~~~~~~~~~vl~~l~~~~Lk~I~~~~ 76 (131)
T d1dxya2 2 KIIAYGARVDEI----QYFKQWAKDTGNTLEYH-TEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGIKFLTIRN 76 (131)
T ss_dssp EEEECSCCTTTH----HHHHHHHHHHCCEEEEC-SSCCCTTGGGGGTTCSEEEECCSSCBCHHHHHHHHHTTCCEEEESS
T ss_pred EEEEEECCCCCH----HHHHHHHHHCCEEEEEC-CCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCEEEEEECC
T ss_conf 899992275758----99999887769399986-8999889998836998999946888898998523347747998715
Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 887623455555417982799615447655567256523788886433443047889999999999970214
Q gi|254780901|r 158 CGSTSYDALQYATNQGIDVIVIDHHQVKSEEIPAYALVNPNRLDDLSGQGHLCAAGVVFLVLVLIYRILRQD 229 (600)
Q Consensus 158 ~Gi~~~e~i~~a~~~GidvIVtDHH~~~~~~p~a~aivNP~~~~~~~p~~~l~gaGvaf~l~~al~~~l~~~ 229 (600)
.|.... .+++|+++||.| .|- ++ |. .-+=|-.|+.++.++.|.+...
T Consensus 77 vG~d~I-D~~~a~~~gI~V------------------~n~--P~--~~--~~aVAE~~~~~~l~l~R~l~~~ 123 (131)
T d1dxya2 77 VGTDNI-DMTAMKQYGIRL------------------SNV--PA--YT--ETAVHNMVYFSLQHLVDFLTKG 123 (131)
T ss_dssp SCCTTB-CHHHHHHTTCEE------------------ECC--TT--SS--HHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCC-CCCCCCCCEEEE------------------EEC--CC--CC--CHHHHHHHHHHHHHHHCCHHHH
T ss_conf 544664-443113434899------------------957--99--78--5459999999999998162888
No 29
>d1wv2a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Pseudomonas aeruginosa [TaxId: 287]}
Probab=76.41 E-value=2.1 Score=19.55 Aligned_cols=94 Identities=20% Similarity=0.303 Sum_probs=41.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC-CHHHHHHHHHCCCCEEE
Q ss_conf 48799999999999779979999407886152899999999976994799807874336688-97898874202686899
Q gi|254780901|r 76 TDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGP-NPSLMEKFINEGAQLII 154 (600)
Q Consensus 76 ~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl-~~~~i~~~~~~g~~LiI 154 (600)
||+.+.++-...-++.+=+++-|..-| -++.+-|..+|..+..-.-+=..-|-|+ |+..++.+.++ .+.-+
T Consensus 111 Pd~~etl~Aa~~Lv~egF~Vlpy~~~D-------~v~ak~le~~Gc~~vMplgsPIGsg~Gi~n~~~l~~i~~~-~~vpv 182 (243)
T d1wv2a_ 111 PNVVETLKAAEQLVKDGFDVMVYTSDD-------PIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEE-AKVPV 182 (243)
T ss_dssp BCHHHHHHHHHHHHTTTCEEEEEECSC-------HHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHH-CSSCB
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCC-------HHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHCCCC-CCCCE
T ss_conf 858888998887613766787506878-------8987678871750466326522246320367888760015-78336
Q ss_pred EECCCCCCHHHHHHHHHCCCCEE
Q ss_conf 96488762345555541798279
Q gi|254780901|r 155 TVDCGSTSYDALQYATNQGIDVI 177 (600)
Q Consensus 155 tvD~Gi~~~e~i~~a~~~GidvI 177 (600)
.||-||..-..+..|.++|.|-+
T Consensus 183 ivdAGIg~psdaa~AMElG~dgV 205 (243)
T d1wv2a_ 183 LVDAGVGTASDAAIAMELGCEAV 205 (243)
T ss_dssp EEESCCCSHHHHHHHHHHTCSEE
T ss_pred EEECCCCCHHHHHHHHHCCCCEE
T ss_conf 85246687777999997459899
No 30
>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}
Probab=75.42 E-value=2.2 Score=19.36 Aligned_cols=77 Identities=18% Similarity=0.284 Sum_probs=48.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHH----HHCCCCEEEEECCCCCCHHHH
Q ss_conf 7997999940788615289999999997699479980787433668897898874----202686899964887623455
Q gi|254780901|r 91 NSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKF----INEGAQLIITVDCGSTSYDAL 166 (600)
Q Consensus 91 ~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~----~~~g~~LiItvD~Gi~~~e~i 166 (600)
++.||+++||- .-- ++. -+..++..+|.++...-|. +|-+....++.. .+.+.+.-+|-| -.+++
T Consensus 2 ~g~ki~~vGD~-~nn-V~~-Sli~~~~~~g~~i~~~~P~----~~~~~~~~~~~~~~~~~~~~~~i~~~~d----~~~ai 70 (161)
T d1vlva2 2 KGVKVVFMGDT-RNN-VAT-SLMIACAKMGMNFVACGPE----ELKPRSDVFKRCQEIVKETDGSVSFTSN----LEEAL 70 (161)
T ss_dssp TTCEEEEESCT-TSH-HHH-HHHHHHHHTTCEEEEESCG----GGCCCHHHHHHHHHHHHHHCCEEEEESC----HHHHH
T ss_pred CCCEEEEECCC-CCH-HHH-HHHHHHHHCCCEEEEECCH----HHHHHHHHHHHHHHHHHHCCCCEEEEEC----HHHHH
T ss_conf 99999999278-568-999-9999999859979995530----3341125788888887503876389706----78730
Q ss_pred HHHHHCCCCEEEECCCC
Q ss_conf 55541798279961544
Q gi|254780901|r 167 QYATNQGIDVIVIDHHQ 183 (600)
Q Consensus 167 ~~a~~~GidvIVtDHH~ 183 (600)
.+.|||.||-=.
T Consensus 71 -----~~aDviyt~~~q 82 (161)
T d1vlva2 71 -----AGADVVYTDVWA 82 (161)
T ss_dssp -----TTCSEEEECCCC
T ss_pred -----HHHHHEECCCEE
T ss_conf -----121000001001
No 31
>d1h5ya_ c.1.2.1 (A:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=74.52 E-value=2.2 Score=19.36 Aligned_cols=68 Identities=10% Similarity=0.108 Sum_probs=42.5
Q ss_pred HHHHHHHCCCCEEEEE-CCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf 9999997699479980-78743366889789887420268689996488762345555541798279961
Q gi|254780901|r 112 MMRFLSHCSVNANMYI-PDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVID 180 (600)
Q Consensus 112 l~~~L~~~g~~v~~~I-P~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtD 180 (600)
+.+.+...|++--+.+ -+.-..+...+...++++... +.+=++++.|+.+.+.++.+-+.|.+-||..
T Consensus 37 ~a~~~~~~gadei~ivDl~~~~~~~~~~~~~i~~i~~~-~~~pi~~gGGIr~~e~~~~ll~~G~~kVii~ 105 (252)
T d1h5ya_ 37 MAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEA-VSIPVLVGGGVRSLEDATTLFRAGADKVSVN 105 (252)
T ss_dssp HHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHH-CSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH-CCCCCEEECCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 99999987999899971334322454089999988750-4886313045211455566752488079834
No 32
>d1nmpa_ c.135.1.1 (A:) Hypothetical protein YbgI {Escherichia coli [TaxId: 562]}
Probab=72.52 E-value=1.8 Score=20.10 Aligned_cols=29 Identities=24% Similarity=0.438 Sum_probs=24.2
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf 86899964887623455555417982799615
Q gi|254780901|r 150 AQLIITVDCGSTSYDALQYATNQGIDVIVIDH 181 (600)
Q Consensus 150 ~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDH 181 (600)
.++++++|. ..+.++.|.+.|+|+|||-|
T Consensus 36 ~kI~v~lD~---t~~vi~~A~~~g~dlIItHH 64 (247)
T d1nmpa_ 36 QKIVTGVTA---SQALLDEAVRLGADAVIVHH 64 (247)
T ss_dssp CEEEEEEEC---CHHHHHHHHHTTCSEEEEEE
T ss_pred CEEEEEECC---CHHHHHHHHHCCCCEEEECC
T ss_conf 989999769---99999999977999999888
No 33
>d1rdua_ c.55.5.1 (A:) Hypothetical protein TM1290 {Thermotoga maritima [TaxId: 2336]}
Probab=72.51 E-value=1.7 Score=20.23 Aligned_cols=53 Identities=17% Similarity=0.500 Sum_probs=38.4
Q ss_pred EECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf 80787433668897898874202686899964887623455555417982799615
Q gi|254780901|r 126 YIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDH 181 (600)
Q Consensus 126 ~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDH 181 (600)
.+.+|...+||-.....+.+...+++.+|+...|-.+. ..+++.||+|+.++.
T Consensus 39 ~ie~~~~~~~~~~~~~~~~l~~~~v~~vi~~~iG~~a~---~~L~~~GI~v~~~~~ 91 (116)
T d1rdua_ 39 VVENTIADAHGTGPKVVQSLVSKGVEYLIASNVGRNAF---ETLKAAGVKVYRFEG 91 (116)
T ss_dssp EEECCCCSCCCSSCSHHHHHHTTTCCEEECSSCCSSCH---HHHHTTTCEEECCCS
T ss_pred EEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCHHHH---HHHHHCCCEEEECCC
T ss_conf 99756788765532789999986999999888698899---999987999997499
No 34
>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=71.08 E-value=2.8 Score=18.62 Aligned_cols=129 Identities=19% Similarity=0.279 Sum_probs=72.8
Q ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCC--HHHCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 78889889999998819999999999967889789886619667771899--5561487999999999997799799994
Q gi|254780901|r 22 LGQEGINRALAITQKHAIPDIVARVLVNRNVSIDYAKDFLNPSIRLLMPD--PLILTDCDKAARRIVQAIYNSEKIMIFG 99 (600)
Q Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~a~iL~~Rgi~~~~~~~fL~p~l~~l~~d--P~~l~dm~~A~~ri~~ai~~~ekI~I~g 99 (600)
.++.....+...++.+|++...+ ++.||-+ -+.|+-|+-.. ... -..|.-+ ...-++++|++.-
T Consensus 52 vP~s~~~~a~g~a~~l~~p~~~~-~ikn~~~----~RtfI~p~~~~-R~~~v~~K~~~~--------~~~i~gk~vvlVD 117 (243)
T d1ecfa1 52 IPETSCDIALEIARILGKPYRQG-FVKNRYV----GRTFIMPGQQL-RRKSVRRKLNAN--------RAEFRDKNVLLVD 117 (243)
T ss_dssp CTTTTHHHHHHHHHHHTCCBCCC-EEECSCC----CCCCCCSSSCC-CCCCSTTTEEEC--------GGGTTTCCEEEEE
T ss_pred CCCCCHHHHHHHHHHCCCHHHHH-HHHCCCC----HHHHHCCCHHH-HHHHHHHCCCCC--------HHEECCCEEEEEH
T ss_conf 66664235589998829714422-2312420----03320875899-998876423320--------1113155179972
Q ss_pred CCCCCHHHHHHHHHHHHHHCCC-CEEEEE---CCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCC
Q ss_conf 0788615289999999997699-479980---787433668897898874202686899964887623455555417982
Q gi|254780901|r 100 DYDVDGAASVALMMRFLSHCSV-NANMYI---PDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGID 175 (600)
Q Consensus 100 DyD~DGitstail~~~L~~~g~-~v~~~I---P~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~Gid 175 (600)
|-=|=|.|+-. +.+.|+..|+ +|+..| |-|...-||+.....++++..+ .+.+++ ++..|.|
T Consensus 118 DSIVRGtT~k~-iv~~L~~~gakeih~~i~sPpi~~pc~yGId~p~~~ELIA~~-----------~s~eei--~~~igaD 183 (243)
T d1ecfa1 118 DSIVRGTTSEQ-IIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHG-----------REVDEI--RQIIGAD 183 (243)
T ss_dssp SCCSSSHHHHH-HHHHHHHTTCSSEEEEESSCCCCSCCCSSCCCCCGGGCTTTT-----------CCHHHH--HHHHTCS
T ss_pred HHHHHHHHHHH-HHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHC-----------CCHHHH--HHHHHHH
T ss_conf 57776466999-999999719986899963331145432355532035677515-----------510677--7887654
Q ss_pred EEE
Q ss_conf 799
Q gi|254780901|r 176 VIV 178 (600)
Q Consensus 176 vIV 178 (600)
-+.
T Consensus 184 sL~ 186 (243)
T d1ecfa1 184 GLI 186 (243)
T ss_dssp EEE
T ss_pred HHH
T ss_conf 664
No 35
>d1vzwa1 c.1.2.1 (A:2-240) Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA {Streptomyces coelicolor [TaxId: 1902]}
Probab=70.37 E-value=2.8 Score=18.51 Aligned_cols=71 Identities=14% Similarity=0.137 Sum_probs=50.3
Q ss_pred HHHHHHHHCCCCEEEEEC-CCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCC
Q ss_conf 999999976994799807-8743366889789887420268689996488762345555541798279961544
Q gi|254780901|r 111 LMMRFLSHCSVNANMYIP-DRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQ 183 (600)
Q Consensus 111 il~~~L~~~g~~v~~~IP-~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~ 183 (600)
-+.+.+...|++--|.+- ++. .+-+.+...++.+... +.+=|+++.|+.+.+.++.+-+.|.+-+|+--..
T Consensus 35 ~~a~~~~~~ga~~l~i~DLd~~-~~~~~~~~~i~~i~~~-~~~pi~vGGGIrs~~~~~~ll~~Ga~kVvi~s~~ 106 (239)
T d1vzwa1 35 EAALAWQRSGAEWLHLVDLDAA-FGTGDNRALIAEVAQA-MDIKVELSGGIRDDDTLAAALATGCTRVNLGTAA 106 (239)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHH-HTSCCCHHHHHHHHHH-CSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHCCCCEEEEEEECCC-CCCCCHHHHHHHHHHH-CCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHHH
T ss_conf 9999999869988999730022-2344008999988764-0860676300134301210001266411356776
No 36
>d1guda_ c.93.1.1 (A:) D-allose-binding protein {Escherichia coli [TaxId: 562]}
Probab=69.70 E-value=2.9 Score=18.41 Aligned_cols=70 Identities=16% Similarity=0.140 Sum_probs=44.3
Q ss_pred HHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCC-CHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 999976994799807874336688978988742026868999648876-23455555417982799615447
Q gi|254780901|r 114 RFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGST-SYDALQYATNQGIDVIVIDHHQV 184 (600)
Q Consensus 114 ~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~-~~e~i~~a~~~GidvIVtDHH~~ 184 (600)
+..+..|.++..+..+...+ .--....++.+...+++.||..-.... ..+.++.+.+.|+-|+..|-...
T Consensus 25 ~~a~~~g~~~~i~~~~~~~d-~~~q~~~i~~~i~~~~DgIi~~~~~~~~~~~~l~~~~~~gipvv~~d~~~~ 95 (288)
T d1guda_ 25 DEAKTLGVSVDIFASPSEGD-FQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEKID 95 (288)
T ss_dssp HHHHHHTCCEEEEECSSTTC-HHHHHHHHHHHHTSSEEEEEECCSSSSTTHHHHHHHHHTTCEEEEESSCCC
T ss_pred HHHHHCCCEEEEEECCCCCC-HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 99997399799996589899-999999999999669998997247840212899999728974999678876
No 37
>d2c4ka1 c.61.1.2 (A:7-166) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.70 E-value=2.9 Score=18.41 Aligned_cols=70 Identities=23% Similarity=0.198 Sum_probs=42.2
Q ss_pred CCCEEEEECC--CC-CHHHHHHHHHHHHHHCCC-CEEEEECC--------CCCCCCCCCHHHHHHHHHCCCCEEEEECCC
Q ss_conf 9979999407--88-615289999999997699-47998078--------743366889789887420268689996488
Q gi|254780901|r 92 SEKIMIFGDY--DV-DGAASVALMMRFLSHCSV-NANMYIPD--------RIVDGYGPNPSLMEKFINEGAQLIITVDCG 159 (600)
Q Consensus 92 ~ekI~I~gDy--D~-DGitstail~~~L~~~g~-~v~~~IP~--------R~~eGYGl~~~~i~~~~~~g~~LiItvD~G 159 (600)
++.+.|.... |+ |-+....+|..+++..|+ ++...||- |+..|=-.+..+++.+...|++-|||+|--
T Consensus 51 g~~V~ivqs~~~~~n~~lmeLll~~da~k~~~a~~It~ViPY~~YaRQDk~~~~g~i~a~~va~~l~~~g~d~vitvDlH 130 (160)
T d2c4ka1 51 GQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVCKLLASMLAKAGLTHIITMDLH 130 (160)
T ss_dssp TCCEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSCEEEEESSCTTTTTTSCCSSSCCHHHHHHHHHHHTCCCEEEEESCS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 88248995167530779999999999999847455344023441220543345777017888767765286437896168
Q ss_pred CC
Q ss_conf 76
Q gi|254780901|r 160 ST 161 (600)
Q Consensus 160 i~ 161 (600)
..
T Consensus 131 ~~ 132 (160)
T d2c4ka1 131 QK 132 (160)
T ss_dssp SG
T ss_pred HH
T ss_conf 08
No 38
>d1jeoa_ c.80.1.3 (A:) Probable 3-hexulose-6-phosphate isomerase MJ1247 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=68.61 E-value=3.1 Score=18.25 Aligned_cols=97 Identities=21% Similarity=0.299 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHH--HHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEC
Q ss_conf 9999999999779979999407886152899--99999997699479980787433668897898874202686899964
Q gi|254780901|r 80 KAARRIVQAIYNSEKIMIFGDYDVDGAASVA--LMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVD 157 (600)
Q Consensus 80 ~A~~ri~~ai~~~ekI~I~gDyD~DGitsta--il~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD 157 (600)
+..+++.+.|.+.++|.+|| + |.++.+ -+...|..+|.++.+. . +.+-. .+ ..+ +++|..-
T Consensus 25 ~~i~~~~~~i~~a~~I~~~G---~-G~S~~~a~~~~~~l~~lg~~~~~~-~----~~~~~------~~-~~~-Dl~I~iS 87 (177)
T d1jeoa_ 25 NKLDSLIDRIIKAKKIFIFG---V-GRSGYIGRCFAMRLMHLGFKSYFV-G----ETTTP------SY-EKD-DLLILIS 87 (177)
T ss_dssp HHHHHHHHHHHHCSSEEEEC---C-HHHHHHHHHHHHHHHHTTCCEEET-T----STTCC------CC-CTT-CEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEE---C-CHHHHHHHHHHHHHHHCCCCCCCC-C----CCCCC------CC-CCC-CEEEEEC
T ss_conf 99999999998799399997---5-689999999999999659742013-3----32345------56-777-7688713
Q ss_pred -CCCC--CHHHHHHHHHCCCCEEE-ECCCCCCCCCCCCEEEE
Q ss_conf -8876--23455555417982799-61544765556725652
Q gi|254780901|r 158 -CGST--SYDALQYATNQGIDVIV-IDHHQVKSEEIPAYALV 195 (600)
Q Consensus 158 -~Gi~--~~e~i~~a~~~GidvIV-tDHH~~~~~~p~a~aiv 195 (600)
.|-+ -.+.++.|+++|+.||. |.+..+..+. |+.++
T Consensus 88 ~sG~t~~~i~~~~~ak~~g~~vI~IT~~~~~l~~~--aD~~l 127 (177)
T d1jeoa_ 88 GSGRTESVLTVAKKAKNINNNIIAIVCECGNVVEF--ADLTI 127 (177)
T ss_dssp SSSCCHHHHHHHHHHHTTCSCEEEEESSCCGGGGG--CSEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH--CCCEE
T ss_conf 33026899999999987599436773688867985--68369
No 39
>d2ji7a1 c.31.1.3 (A:195-369) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
Probab=67.53 E-value=3.2 Score=18.09 Aligned_cols=84 Identities=11% Similarity=0.128 Sum_probs=44.4
Q ss_pred CCHHHCCCHHHHHHHHHHHHHCCCC-EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCC--CCCCCCCCHHHHHHHH
Q ss_conf 9955614879999999999977997-999940788615289999999997699479980787--4336688978988742
Q gi|254780901|r 70 PDPLILTDCDKAARRIVQAIYNSEK-IMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDR--IVDGYGPNPSLMEKFI 146 (600)
Q Consensus 70 ~dP~~l~dm~~A~~ri~~ai~~~ek-I~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R--~~eGYGl~~~~i~~~~ 146 (600)
|+|. +++++.+.+.+-++ +.|.|. .+.--.+..-+.++...+|+.|......| +.+.|-++-...-...
T Consensus 4 P~~~-------~l~~a~~~L~~A~rPvii~G~-g~~~~~a~~~l~~lae~~~iPv~~t~~~~g~~~~~h~~~~~~~~~~~ 75 (175)
T d2ji7a1 4 PAED-------AIARAADLIKNAKRPVIMLGK-GAAYAQCDDEIRALVEETGIPFLPMGMAKGLLPDNHPQSAAATRAFA 75 (175)
T ss_dssp CCHH-------HHHHHHHHHHTCSSCEEEECH-HHHHTTCHHHHHHHHHHHTCCEEECTTTBTTBCTTCTTBCGGGHHHH
T ss_pred CCHH-------HHHHHHHHHHHCCCEEEEECC-CCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 3999-------999999999848998999887-92411027999997653041021234223568875433222110112
Q ss_pred HCCCCEEEEECCCCC
Q ss_conf 026868999648876
Q gi|254780901|r 147 NEGAQLIITVDCGST 161 (600)
Q Consensus 147 ~~g~~LiItvD~Gi~ 161 (600)
-..++|||.+.|-.+
T Consensus 76 l~~aDlii~vG~~~~ 90 (175)
T d2ji7a1 76 LAQCDVCVLIGARLN 90 (175)
T ss_dssp HHHCSEEEEESCCSS
T ss_pred EECCCCEEEEECCCC
T ss_conf 311231013512578
No 40
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=67.03 E-value=3.3 Score=18.02 Aligned_cols=74 Identities=9% Similarity=0.054 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEC
Q ss_conf 79999999999977997999940788615289999999997699479980787433668897898874202686899964
Q gi|254780901|r 78 CDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVD 157 (600)
Q Consensus 78 m~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD 157 (600)
++..++.|.+.+..+++..|| |--+-.+--+..+|+..|.++.++=.+--++ --.+.++++.....+.|+++|
T Consensus 17 v~dll~~i~~~~~~g~r~lvf----c~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~---eR~~~l~~F~~G~~~vLVaT~ 89 (174)
T d1c4oa2 17 ILDLMEGIRERAARGERTLVT----VLTVRMAEELTSFLVEHGIRARYLHHELDAF---KRQALIRDLRLGHYDCLVGIN 89 (174)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE----CSSHHHHHHHHHHHHHTTCCEEEECTTCCHH---HHHHHHHHHHTTSCSEEEESC
T ss_pred HHHHHHHHHHHHHCCCCEEEE----ECCHHHHHHHHHHHHHCCCCEEEEECCCCHH---HHHHHHHHHHCCCEEEEEEEE
T ss_conf 999999999998659838999----8230379999999986597258986155418---899999999779869999635
Q ss_pred C
Q ss_conf 8
Q gi|254780901|r 158 C 158 (600)
Q Consensus 158 ~ 158 (600)
-
T Consensus 90 v 90 (174)
T d1c4oa2 90 L 90 (174)
T ss_dssp C
T ss_pred E
T ss_conf 6
No 41
>d1tksa_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Candida albicans [TaxId: 5476]}
Probab=66.90 E-value=2.1 Score=19.59 Aligned_cols=91 Identities=15% Similarity=0.156 Sum_probs=43.9
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCH---------HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCE
Q ss_conf 999999997799799994078861---------52899999999976994799807874336688978988742026868
Q gi|254780901|r 82 ARRIVQAIYNSEKIMIFGDYDVDG---------AASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQL 152 (600)
Q Consensus 82 ~~ri~~ai~~~ekI~I~gDyD~DG---------itstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~L 152 (600)
++...+++++++.|+|+-|.|=.+ ......+.-.++.-+.-+++-++...-+-.||..-.-+.-...+..-
T Consensus 6 ie~ai~~l~~G~~Viv~Dd~~RE~EgDlv~~Ae~~T~~~i~fm~~~~~Glic~a~~~~~~~~L~L~~m~~~~~~~~~t~f 85 (202)
T d1tksa_ 6 IEEALEAYKNGEFLIVMDDEDRENEGDLIMAAELITQEKMAFLVRYSSGYVCVPLSEERANQLELPPMLANRSDRHGTAY 85 (202)
T ss_dssp HHHHHHHHHTTCCEEEESSSCTTCBCEEEEEGGGCCHHHHHHHHHTBCSCCEEEEEHHHHHHTTCCBSCC------CCCB
T ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 99999999889979999689988640689797989999999999847887588347899744235654333567777650
Q ss_pred EEEE------CCCCCCHHHHHHHHHC
Q ss_conf 9996------4887623455555417
Q gi|254780901|r 153 IITV------DCGSTSYDALQYATNQ 172 (600)
Q Consensus 153 iItv------D~Gi~~~e~i~~a~~~ 172 (600)
-++| -.|||+.+...-.+.+
T Consensus 86 ~vsvd~~~g~~TGISa~DRa~Tir~l 111 (202)
T d1tksa_ 86 TITCDFAEGTTTGISAHDRALTTRSL 111 (202)
T ss_dssp BCCEEESTTCSSSCSHHHHHHHHHHH
T ss_pred CCCHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 34442136875565589999999997
No 42
>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=64.93 E-value=3.6 Score=17.73 Aligned_cols=132 Identities=22% Similarity=0.341 Sum_probs=76.6
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCHHH--CCCCHHHCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 1157888988999999881999999999996788978988661966777--18995561487999999999997799799
Q gi|254780901|r 19 VSLLGQEGINRALAITQKHAIPDIVARVLVNRNVSIDYAKDFLNPSIRL--LMPDPLILTDCDKAARRIVQAIYNSEKIM 96 (600)
Q Consensus 19 ~~~~~~~~~~~~~~l~~~~~~~~~~a~iL~~Rgi~~~~~~~fL~p~l~~--l~~dP~~l~dm~~A~~ri~~ai~~~ekI~ 96 (600)
....++.....+...++..|++.-.+ +..||- .-+.|+.|+-+. ..-. ..+. ....+-++++|+
T Consensus 43 V~~vPds~~~~a~g~a~~~~ip~~~~-~ikn~~----~~RtFI~p~~~~R~~~v~-~K~~--------~~~~~i~gK~vv 108 (231)
T d1gph11 43 VTGVPDSSISAAIGYAEATGIPYELG-LIKNRY----VGRTFIQPSQALREQGVR-MKLS--------AVRGVVEGKRVV 108 (231)
T ss_dssp EECCTTTTHHHHHHHHHHHTCCBCCC-EEECTT----CSTTCCCCCHHHHHHTCC-CSEE--------ECHHHHTTCEEE
T ss_pred EEECCCCCHHHHHHHHHHHCCCHHHC-CEEHHH----HHHCCCCCCHHHHHHHHH-HHHH--------HHHHEECCCCEE
T ss_conf 98437753667899999819841214-000102----555268993588998888-7634--------534112167448
Q ss_pred EEECCCCCHHHHHHHHHHHHHHCCC-CEEEEE---CCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC
Q ss_conf 9940788615289999999997699-479980---787433668897898874202686899964887623455555417
Q gi|254780901|r 97 IFGDYDVDGAASVALMMRFLSHCSV-NANMYI---PDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQ 172 (600)
Q Consensus 97 I~gDyD~DGitstail~~~L~~~g~-~v~~~I---P~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~ 172 (600)
+.-|-=|=|.|+-. +.+.|+..|+ +|+..| |-|...-||+....-++++..+ .+.++| .+..
T Consensus 109 lVDDSIVRGtT~k~-iv~~lr~aGakeVh~~i~sPpi~~pc~yGID~p~~~ELIA~~-----------~t~eEI--~~~i 174 (231)
T d1gph11 109 MVDDSIVRGTTSRR-IVTMLREAGATEVHVKISSPPIAHPCFYGIDTSTHEELIASS-----------HSVDEI--RQEI 174 (231)
T ss_dssp EEESCCSSSHHHHH-HHHHHHHTTCSEEEEEESSCCCCSCCCSCGGGCCSSCCHHHH-----------CCHHHH--HHHH
T ss_pred EEEHHHHCCCHHHH-HHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHCC-----------CCHHHH--HHHH
T ss_conf 85013440302999-999999809975999834422254333103322222566224-----------688999--7552
Q ss_pred CCCEEE
Q ss_conf 982799
Q gi|254780901|r 173 GIDVIV 178 (600)
Q Consensus 173 GidvIV 178 (600)
|.|.+.
T Consensus 175 gaDSL~ 180 (231)
T d1gph11 175 GADTLS 180 (231)
T ss_dssp TCSEEE
T ss_pred CCCEEE
T ss_conf 478667
No 43
>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=64.89 E-value=3.6 Score=17.72 Aligned_cols=78 Identities=18% Similarity=0.309 Sum_probs=51.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH----CCCCEEEEECCCCCCHHHH
Q ss_conf 799799994078861528999999999769947998078743366889789887420----2686899964887623455
Q gi|254780901|r 91 NSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFIN----EGAQLIITVDCGSTSYDAL 166 (600)
Q Consensus 91 ~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~----~g~~LiItvD~Gi~~~e~i 166 (600)
++-+|++.||- --. ++.++ ..++..+|.++.+.-| +||-+....++.+.+ .|.+..+|-| ..+++
T Consensus 4 ~~lkia~vGD~-~nn-V~~Sl-i~~~~~~G~~l~l~~P----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~eai 72 (185)
T d1dxha2 4 HDISYAYLGDA-RNN-MGNSL-LLIGAKLGMDVRIAAP----KALWPHDEFVAQCKKFAEESGAKLTLTED----PKEAV 72 (185)
T ss_dssp GGCEEEEESCC-SSH-HHHHH-HHHHHHTTCEEEEECC----GGGSCCHHHHHHHHHHHHHHTCEEEEESC----HHHHT
T ss_pred CCCEEEEECCC-CCH-HHHHH-HHHHHHCCCEEEEECC----HHHHHHHHHHHHHHHHHHCCCCEEEEEEC----HHHCC
T ss_conf 88889998678-455-99999-9999985997999866----79875137899998876415881899967----46502
Q ss_pred HHHHHCCCCEEEECCCCC
Q ss_conf 555417982799615447
Q gi|254780901|r 167 QYATNQGIDVIVIDHHQV 184 (600)
Q Consensus 167 ~~a~~~GidvIVtDHH~~ 184 (600)
.|.|||.||-=..
T Consensus 73 -----~~aDvVyt~~w~~ 85 (185)
T d1dxha2 73 -----KGVDFVHTDVWVS 85 (185)
T ss_dssp -----TTCSEEEECCCSC
T ss_pred -----CCCCEEEEEHHHH
T ss_conf -----3145897221112
No 44
>d1vmka_ c.56.2.1 (A:) Purine nucleoside phosphorylase, PNP {Thermotoga maritima [TaxId: 2336]}
Probab=63.61 E-value=3.8 Score=17.55 Aligned_cols=128 Identities=15% Similarity=0.077 Sum_probs=65.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEECC------------------CCCHHHHHHHHHHH----HHHCCCCEEEEECCCCC
Q ss_conf 148799999999999779979999407------------------88615289999999----99769947998078743
Q gi|254780901|r 75 LTDCDKAARRIVQAIYNSEKIMIFGDY------------------DVDGAASVALMMRF----LSHCSVNANMYIPDRIV 132 (600)
Q Consensus 75 l~dm~~A~~ri~~ai~~~ekI~I~gDy------------------D~DGitstail~~~----L~~~g~~v~~~IP~R~~ 132 (600)
|++|+++++.|.+.+..+-+|.|.+-- |..|...++.--.. +-.++-.-.++.+.|+.
T Consensus 2 ~~~~~~~~~~i~~~~~~~P~igIIlGSGL~~l~d~~~~~~~i~y~dip~fp~stv~Gh~g~l~~g~~~g~~v~~~~Gr~H 81 (265)
T d1vmka_ 2 MKKIEEARTFISERTNLSPDILIILGSGFGPFIEKVEDPVIIDYKDIPHFPQPTVEGHSGKLVFGRISDKPVMIMAGRFH 81 (265)
T ss_dssp HHHHHHHHHHHHTTCCCCCSEEEEEC---CTTTTTCEEEEEEEGGGSTTCC--------CEEEEEEETTEEEEEEESCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCC
T ss_conf 48999999999984799998899945877788775068689860117899988756888857988758856897479996
Q ss_pred --CCCCCCHHH--HHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCC---CEEEECCCCCCCCCC
Q ss_conf --366889789--8874202686899964887623455555417982799615447655567---256523788886433
Q gi|254780901|r 133 --DGYGPNPSL--MEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQVKSEEIP---AYALVNPNRLDDLSG 205 (600)
Q Consensus 133 --eGYGl~~~~--i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~~~~~~p~---a~aivNP~~~~~~~p 205 (600)
|||.++.-+ |.-+++-|++.||.. ++.-.+...-+-|-=+++.||=......|. ....+.|..+++..+
T Consensus 82 ~yeg~~~~~v~~~i~al~~lGv~~ii~t----na~Gsl~~~~~pGdlv~~~d~Id~t~~~p~~~~~~~~~~~~~~~~~~~ 157 (265)
T d1vmka_ 82 LYEGHDPATVAFPVYLAKYVGVKGVVVT----NAAGAINPEFKPGEIILVRDIINFMFRNPLRGPNDEKIGPRFPDMSSV 157 (265)
T ss_dssp GGGTCCHHHHHHHHHHHHHHTCCEEEEE----EEEEECSTTCCTTCEEEEEEEEECSCCCTTCSCCCTTTCCSSCCCTTC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEE----CCCCCCCCCCCCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 7899888994259999987398769996----143345777899868861136766389998775653234432203778
Q ss_pred C
Q ss_conf 4
Q gi|254780901|r 206 Q 206 (600)
Q Consensus 206 ~ 206 (600)
+
T Consensus 158 ~ 158 (265)
T d1vmka_ 158 V 158 (265)
T ss_dssp S
T ss_pred H
T ss_conf 8
No 45
>d2anua1 c.6.3.1 (A:5-233) Hypothetical protein TM0559 {Thermotoga maritima [TaxId: 2336]}
Probab=61.77 E-value=2.4 Score=19.15 Aligned_cols=25 Identities=20% Similarity=0.379 Sum_probs=18.0
Q ss_pred CCHHHHHHHHHCCCCEE-EECCCCCC
Q ss_conf 62345555541798279-96154476
Q gi|254780901|r 161 TSYDALQYATNQGIDVI-VIDHHQVK 185 (600)
Q Consensus 161 ~~~e~i~~a~~~GidvI-VtDHH~~~ 185 (600)
+-.+-++.|+++|+|+| ||||....
T Consensus 20 t~~e~~~~A~~~Gld~iaiTDH~~~~ 45 (229)
T d2anua1 20 PLGEVVDLFGKHGVDVVSITDHIVDR 45 (229)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEEEECH
T ss_pred CHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 89999999998499899992899742
No 46
>d1vpxa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Thermotoga maritima [TaxId: 2336]}
Probab=61.31 E-value=4.1 Score=17.26 Aligned_cols=85 Identities=16% Similarity=0.148 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH--HHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEE
Q ss_conf 999999999997799799994078861528999999--999769947998078743366889789887420268689996
Q gi|254780901|r 79 DKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMR--FLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITV 156 (600)
Q Consensus 79 ~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~--~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItv 156 (600)
......+..... ..+.+. |.|-++-.++.. .+...+.++...||- ..+| ..++.++.++|++.-+|+
T Consensus 42 ~~~~~~i~~~~~--~~is~e----v~~~~~~~m~~~a~~l~~~~~ni~VKIP~-t~~G----~~ai~~L~~~Gi~~n~Ta 110 (218)
T d1vpxa_ 42 KQRVKEICDLVK--GPVSAE----VVSLDYEGMVREARELAQISEYVVIKIPM-TPDG----IKAVKTLSAEGIKTNVTL 110 (218)
T ss_dssp -CHHHHHHHHHC--SCEEEE----CSCCSHHHHHHHHHHHHTTCTTEEEEEES-SHHH----HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHCCC--CCCHHH----HCCCCHHHHHHHHHHHHCCCCCEEEEECC-CCCC----HHHHHHHHHCCCCEEEEE
T ss_conf 999999985257--741021----13472788889999985135541899545-5644----589999877097615677
Q ss_pred CCCCCCHHHHHHHHHCCCCEE
Q ss_conf 488762345555541798279
Q gi|254780901|r 157 DCGSTSYDALQYATNQGIDVI 177 (600)
Q Consensus 157 D~Gi~~~e~i~~a~~~GidvI 177 (600)
+-+.++.-.|.+.|.+.|
T Consensus 111 ---vfs~~Qa~~Aa~aga~yi 128 (218)
T d1vpxa_ 111 ---VFSPAQAILAAKAGATYV 128 (218)
T ss_dssp ---ECSHHHHHHHHHHTCSEE
T ss_pred ---ECCHHHHHHHHHCCCCEE
T ss_conf ---267999999875489779
No 47
>d1kwga3 c.23.16.5 (A:394-590) A4 beta-galactosidase middle domain {Thermus thermophilus [TaxId: 274]}
Probab=60.78 E-value=4.2 Score=17.19 Aligned_cols=55 Identities=16% Similarity=0.292 Sum_probs=43.5
Q ss_pred HHHHHHHHCCCCEEEEECCCCCCCCC---------CCHHHHHHHHHCCCCEEEEECCCCCCHHH
Q ss_conf 99999997699479980787433668---------89789887420268689996488762345
Q gi|254780901|r 111 LMMRFLSHCSVNANMYIPDRIVDGYG---------PNPSLMEKFINEGAQLIITVDCGSTSYDA 165 (600)
Q Consensus 111 il~~~L~~~g~~v~~~IP~R~~eGYG---------l~~~~i~~~~~~g~~LiItvD~Gi~~~e~ 165 (600)
-.|++|.++|..|.+.=|+.--+||- ++.+.++.+.+.|..||+|.-+|+.+..-
T Consensus 36 ~~Y~al~~~gv~vDiv~~~~dls~Yklvv~P~l~~~~~~~l~~~v~~GG~lv~g~rsG~~de~~ 99 (197)
T d1kwga3 36 LFYSALRRLGLDVDVVPPGASLRGYAFAVVPSLPIVREEALEAFREAEGPVLFGPRSGSKTETF 99 (197)
T ss_dssp HHHHHHHTTTCCEEEECTTSCCTTCSEEEESCCSSCCHHHHHHHHTCSSCEEECTTTTCCCTTS
T ss_pred HHHHHHHHCCCCEEECCCCCCCCCCCEEEECCHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCC
T ss_conf 9999999759843113898972249899984547589999999997898799942676255771
No 48
>d2dria_ c.93.1.1 (A:) D-ribose-binding protein {Escherichia coli, strain k-12 [TaxId: 562]}
Probab=60.35 E-value=4.3 Score=17.14 Aligned_cols=68 Identities=13% Similarity=0.167 Sum_probs=45.1
Q ss_pred HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC-HHHHHHHHHCCCCEEEECCCC
Q ss_conf 99999769947998078743366889789887420268689996488762-345555541798279961544
Q gi|254780901|r 113 MRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTS-YDALQYATNQGIDVIVIDHHQ 183 (600)
Q Consensus 113 ~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~-~e~i~~a~~~GidvIVtDHH~ 183 (600)
-+.++..|.++..+-.+.-.+ -..+.++.+..+|++.+|..-+.... .+.++.+++.||-+|+.|.-.
T Consensus 24 ~~~a~~~g~~~~i~~~~~~~~---~~~~~i~~~~~~~~d~ii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~ 92 (271)
T d2dria_ 24 QKEADKLGYNLVVLDSQNNPA---KELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQA 92 (271)
T ss_dssp HHHHHHHTCEEEEEECTTCHH---HHHHHHHHHTTTTEEEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHCCCEEEEEECCCCHH---HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCC
T ss_conf 999997499899996899999---999999999862876311212223214789999751421589843665
No 49
>d2gx8a1 c.135.1.1 (A:4-373) Nif3-related protein BC4286 {Bacillus cereus [TaxId: 1396]}
Probab=59.81 E-value=4 Score=17.33 Aligned_cols=31 Identities=26% Similarity=0.539 Sum_probs=25.2
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 86899964887623455555417982799615447
Q gi|254780901|r 150 AQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQV 184 (600)
Q Consensus 150 ~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~~ 184 (600)
.++++|+|. ..+-++.|.++|.|+||| ||.+
T Consensus 38 ~~I~valD~---t~~vi~eAi~~~adlIIt-HHPl 68 (370)
T d2gx8a1 38 RHVLIALDV---TEEVVDEAIQLGANVIIA-HHPL 68 (370)
T ss_dssp CEEEEESSC---CHHHHHHHHHHTCCEEEE-SSCS
T ss_pred CEEEEEECC---CHHHHHHHHHCCCCEEEE-CCCC
T ss_conf 989999769---999999999779999997-9987
No 50
>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=59.45 E-value=4.4 Score=17.03 Aligned_cols=94 Identities=12% Similarity=0.113 Sum_probs=57.9
Q ss_pred HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC-HHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 99999997799799994078861528999999999769947998078743366889-78988742026868999648876
Q gi|254780901|r 83 RRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPN-PSLMEKFINEGAQLIITVDCGST 161 (600)
Q Consensus 83 ~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~-~~~i~~~~~~g~~LiItvD~Gi~ 161 (600)
+.|.+.+.+-++|.|+|--+--+-.|-.++. .|+..|.++...=|.+ ++--|.. -..+.++. ..+++++.+-....
T Consensus 10 ~~i~~~L~~~ksIAVVGaS~~~~~~g~~v~~-~L~~~g~~v~pVnP~~-~~i~G~~~~~sl~dlp-~~iD~v~i~vp~~~ 86 (139)
T d2d59a1 10 EDIREILTRYKKIALVGASPKPERDANIVMK-YLLEHGYDVYPVNPKY-EEVLGRKCYPSVLDIP-DKIEVVDLFVKPKL 86 (139)
T ss_dssp HHHHHHHHHCCEEEEETCCSCTTSHHHHHHH-HHHHTTCEEEEECTTC-SEETTEECBSSGGGCS-SCCSEEEECSCHHH
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCHHHHHH-HHHHCCCEEEEECCCC-CCCCCCCCCCCCCCCC-CCCEEEEEEECHHH
T ss_conf 9999998668969999105999982599999-9997899799989734-3137971456531357-66518999838899
Q ss_pred CHHHHHHHHHCCCCEEEE
Q ss_conf 234555554179827996
Q gi|254780901|r 162 SYDALQYATNQGIDVIVI 179 (600)
Q Consensus 162 ~~e~i~~a~~~GidvIVt 179 (600)
..+.++.+.+.|+.+++.
T Consensus 87 ~~~~~~e~~~~g~k~v~~ 104 (139)
T d2d59a1 87 TMEYVEQAIKKGAKVVWF 104 (139)
T ss_dssp HHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEE
T ss_conf 788999999709999999
No 51
>d2uubb1 c.23.15.1 (B:7-240) Ribosomal protein S2 {Thermus thermophilus [TaxId: 274]}
Probab=59.43 E-value=4.4 Score=17.03 Aligned_cols=101 Identities=17% Similarity=0.188 Sum_probs=65.3
Q ss_pred HCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH----H----
Q ss_conf 61487999999999997799799994078861528999999999769947998078743366889789887----4----
Q gi|254780901|r 74 ILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEK----F---- 145 (600)
Q Consensus 74 ~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~----~---- 145 (600)
.+.-+.+|...+.+...++.+|++.|- - --+.-++.++.+..|. +||.+|.--|-=-|-..+.. +
T Consensus 41 T~~~L~~A~~~i~~~~~~~g~iLfVgT---k-~~~~~~i~~~A~~~~~---~yv~~RWlgG~LTN~~ti~~~i~~l~~l~ 113 (234)
T d2uubb1 41 TMEELERTFRFIEDLAMRGGTILFVGT---K-KQAQDIVRMEAERAGM---PYVNQRWLGGMLTNFKTISQRVHRLEELE 113 (234)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECC---S-SSSHHHHHHHHHSSSC---CEECSCCCTTTTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEC---C-HHHHHHHHHHHHHHCC---EEECCCEECCCCCCCCCCCHHHHHHHHHH
T ss_conf 999999999999998723782367726---6-8778999999999499---87444350772234400002332069999
Q ss_pred --HH---------------------------------CCCCEEEEECCCCCCHHHHHHHHHCCCCEEE-ECCC
Q ss_conf --20---------------------------------2686899964887623455555417982799-6154
Q gi|254780901|r 146 --IN---------------------------------EGAQLIITVDCGSTSYDALQYATNQGIDVIV-IDHH 182 (600)
Q Consensus 146 --~~---------------------------------~g~~LiItvD~Gi~~~e~i~~a~~~GidvIV-tDHH 182 (600)
.+ .-++++|.+|.. .+.-+|..|+.+||-||= +|--
T Consensus 114 ~~~~~~~~~~~tkke~~~~~~~~~kl~k~~~Gi~~m~~~Pd~viv~d~~-~~~~Ai~Ea~~l~IPvIaivDTn 185 (234)
T d2uubb1 114 ALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPT-KEAIAVREARKLFIPVIALADTD 185 (234)
T ss_dssp HHHSSTTGGGSCHHHHTHHHHHHHHHHHHSTTGGGCSSCCSEEEESCTT-TTHHHHHHHHHHTCCEEEEECTT
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEEECCC-CCHHHHHHHHHHCCCEEEEEECC
T ss_conf 8760475223655889988899999998622200011033168870577-42889998886098778996337
No 52
>d1gm5a2 b.40.4.9 (A:106-285) RecG "wedge" domain {Thermotoga maritima [TaxId: 2336]}
Probab=58.60 E-value=4.5 Score=16.93 Aligned_cols=50 Identities=24% Similarity=0.236 Sum_probs=34.3
Q ss_pred EEEEEEECCCCCEEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEEEEECCCC
Q ss_conf 49999984998779999977878701235530699879999997665457811
Q gi|254780901|r 528 HLQMTFESQDSETLQAIAFRVYGTPLGEFLMQSRGKRMHVTGHLCVNYWRGSK 580 (600)
Q Consensus 528 Hlkl~l~~~~g~~i~aI~Fn~~~~~~~~~~~~~~g~~idii~~l~~N~~~G~~ 580 (600)
-++..+.+..| .++.+|||.. +....+....|..+-+.++++.+.|+|.-
T Consensus 82 ~~~~~v~D~~g-~i~l~fFn~~--~~~~~~k~~~G~~v~v~Gkvk~~~~~~~~ 131 (180)
T d1gm5a2 82 ILTAVLSDGLV-HVPLKWFNQD--YLQTYLKQLTGKEVFVTGTVKSNAYTGQY 131 (180)
T ss_dssp EEEEEECCSSC-CEEEEECSCC--TTHHHHHTTCSSCEEEEEEECSCCTTSSC
T ss_pred EEEEEEEECCC-EEEEEEECCH--HHHHHHHHHCCCEEEEEEEEEECCCCCEE
T ss_conf 25789985244-0778886738--99998754139569999877202216601
No 53
>d1zpda1 c.31.1.3 (A:188-362) Pyruvate decarboxylase {Zymomonas mobilis [TaxId: 542]}
Probab=58.13 E-value=4.6 Score=16.87 Aligned_cols=86 Identities=16% Similarity=0.198 Sum_probs=59.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEE------CCCC--CCC-C-CC-CHHHHHHH
Q ss_conf 879999999999977997999940788615289999999997699479980------7874--336-6-88-97898874
Q gi|254780901|r 77 DCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYI------PDRI--VDG-Y-GP-NPSLMEKF 145 (600)
Q Consensus 77 dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~I------P~R~--~eG-Y-Gl-~~~~i~~~ 145 (600)
.++++++++.+.|.+-++.+|+.++.+.---+..-+.++...+|+-|.... |+.. --| | |. +...+.++
T Consensus 7 ~l~~~v~~~~~~l~~AkrPvIi~G~g~~~~~a~~~l~~lae~~~~Pv~tt~~gkg~i~e~~p~~~G~~~G~~~~~~~~~~ 86 (175)
T d1zpda1 7 SLNAAVDETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFTDALGGAVATMAAAKSFFPEENALYIGTSWGEVSYPGVEKT 86 (175)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEEECTTTTTTTCHHHHHHHHHHHCCCEEEEGGGTTSSCTTSTTEEEEECGGGSCTTHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999998289979998968332202999999998623457962366657873001036873113436999999
Q ss_pred HHCCCCEEEEECCCCCCH
Q ss_conf 202686899964887623
Q gi|254780901|r 146 INEGAQLIITVDCGSTSY 163 (600)
Q Consensus 146 ~~~g~~LiItvD~Gi~~~ 163 (600)
.+ +++|||.+.+-.+.+
T Consensus 87 ~~-~aDlvl~lG~~~~d~ 103 (175)
T d1zpda1 87 MK-EADAVIALAPVFNDY 103 (175)
T ss_dssp HH-HCSEEEEESCCCBTT
T ss_pred HH-CCCEEEEECCCCCCC
T ss_conf 73-076699976766754
No 54
>d2iv2x2 c.81.1.1 (X:1-564) Formate dehydrogenase H {Escherichia coli [TaxId: 562]}
Probab=57.50 E-value=4.7 Score=16.79 Aligned_cols=104 Identities=17% Similarity=0.277 Sum_probs=55.3
Q ss_pred HHHHHHHHHH----HHHC--CCCEEEEECCCCCHHHHHHHHHHHHHH-CCCC-EEEE-----ECCC----CCCCCCCCHH
Q ss_conf 7999999999----9977--997999940788615289999999997-6994-7998-----0787----4336688978
Q gi|254780901|r 78 CDKAARRIVQ----AIYN--SEKIMIFGDYDVDGAASVALMMRFLSH-CSVN-ANMY-----IPDR----IVDGYGPNPS 140 (600)
Q Consensus 78 m~~A~~ri~~----ai~~--~ekI~I~gDyD~DGitstail~~~L~~-~g~~-v~~~-----IP~R----~~eGYGl~~~ 140 (600)
-++|.+.|.+ .+++ .+.|.+++-...-|-.....+.+++.. +|.. +..+ -+.. ..-|.+....
T Consensus 80 WdeAld~ia~kl~~i~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~~~c~~~~~~~~~~~~G~~~~~~ 159 (564)
T d2iv2x2 80 WDEALNYVAERLSAIKEKYGPDAIQTTGSSRGTGNETNYVMQKFARAVIGTNNVDCCARVCHGPSVAGLHQSVGNGAMSN 159 (564)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGEEEECCSSTTCHHHHHHHHHHHHHTTCCCCEECSSCCSCCSSSCSHHHHHSCCSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999998729877999825887662889999998887359987577542232067788876535786666
Q ss_pred HHHHHHHCCCCEEEEECCCCCCH-------HHHHHHHHCCCCEEEECCCCCC
Q ss_conf 98874202686899964887623-------4555554179827996154476
Q gi|254780901|r 141 LMEKFINEGAQLIITVDCGSTSY-------DALQYATNQGIDVIVIDHHQVK 185 (600)
Q Consensus 141 ~i~~~~~~g~~LiItvD~Gi~~~-------e~i~~a~~~GidvIVtDHH~~~ 185 (600)
...++ +.+++|+.+ |..-. ..+..++++|..+||+|.....
T Consensus 160 ~~~d~--~~ad~il~~--G~n~~~~~~~~~~~~~~a~~~G~kvvvidPr~t~ 207 (564)
T d2iv2x2 160 AINEI--DNTDLVFVF--GYNPADSHPIVANHVINAKRNGAKIIVCDPRKIE 207 (564)
T ss_dssp CGGGG--GGCSEEEEE--SCCHHHHCHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred CCCEE--ECCCEEEEC--CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 51012--137779988--8354334514789999999879989997887774
No 55
>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}
Probab=57.35 E-value=4.7 Score=16.78 Aligned_cols=78 Identities=18% Similarity=0.280 Sum_probs=49.9
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHH----HHCCCCEEEEECCCCCCHHHH
Q ss_conf 7997999940788615289999999997699479980787433668897898874----202686899964887623455
Q gi|254780901|r 91 NSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKF----INEGAQLIITVDCGSTSYDAL 166 (600)
Q Consensus 91 ~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~----~~~g~~LiItvD~Gi~~~e~i 166 (600)
++-+|++.||- -. -++.+ +..++..+|.++.+.-|. ||-+....++.+ ...|.+..+|-| .++
T Consensus 4 ~~l~i~~vGD~-~n-nv~~S-li~~~~~~g~~l~~~~P~----~~~~~~~~~~~~~~~~~~~g~~~~~~~d-----~~~- 70 (183)
T d1duvg2 4 NEMTLVYAGDA-RN-NMGNS-MLEAAALTGLDLRLVAPQ----ACWPEAALVTECRALAQQNGGNITLTED-----VAK- 70 (183)
T ss_dssp GGCEEEEESCT-TS-HHHHH-HHHHHHHHCCEEEEECCG----GGCCCHHHHHHHHHHHHHTTCEEEEESC-----HHH-
T ss_pred CCCEEEEECCC-CC-HHHHH-HHHHHHHCCCEEEEEECH----HHHHHHHHHHHHHHHHHHCCCCEEEEEC-----HHH-
T ss_conf 78789999378-24-89999-999999849979997136----7631189999988888751885289842-----231-
Q ss_pred HHHHHCCCCEEEECCCCC
Q ss_conf 555417982799615447
Q gi|254780901|r 167 QYATNQGIDVIVIDHHQV 184 (600)
Q Consensus 167 ~~a~~~GidvIVtDHH~~ 184 (600)
.-.|.|||.||=-..
T Consensus 71 ---a~~~aDvvyt~~w~s 85 (183)
T d1duvg2 71 ---GVEGADFIYTDVWVS 85 (183)
T ss_dssp ---HHTTCSEEEECCSSC
T ss_pred ---CCCCCCEEEEEEHHH
T ss_conf ---035688799973134
No 56
>d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=57.09 E-value=4.8 Score=16.75 Aligned_cols=91 Identities=13% Similarity=0.194 Sum_probs=52.1
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCH----H-----HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH--H--------
Q ss_conf 999999997799799994078861----5-----28999999999769947998078743366889789--8--------
Q gi|254780901|r 82 ARRIVQAIYNSEKIMIFGDYDVDG----A-----ASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSL--M-------- 142 (600)
Q Consensus 82 ~~ri~~ai~~~ekI~I~gDyD~DG----i-----tstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~--i-------- 142 (600)
++...+++++++.|.|+-|+|-.+ + .....+.-..+.-+.-++.-++...-+--||..-. .
T Consensus 3 ie~ai~~lk~G~~Viv~Dd~~REnEgDlv~~Ae~~t~e~i~fm~~~~~Glic~a~~~~~~~~L~Lp~m~~~~~~~~~~~~ 82 (219)
T d1snna_ 3 VEKAIEALKKGEIILVYDSDEREGETDMVVASQFITPEHIRIMRKDAGGLICTALHPDICNKLGIPFMVDILEFASQKFK 82 (219)
T ss_dssp HHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHTEEEEEEEECHHHHHHHTCCCHHHHHHHHTTTCH
T ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCEEEEHHHCCHHHHHHHHHCCCCCEEECCCHHHHHHCCCCCCCCHHHHHHHCCC
T ss_conf 89999999879979999689987751489895659999999999728997784688999987699400120121101144
Q ss_pred --HHHH------HCCCCEEEEEC-----CCCCCHHHHHHHHHC
Q ss_conf --8742------02686899964-----887623455555417
Q gi|254780901|r 143 --EKFI------NEGAQLIITVD-----CGSTSYDALQYATNQ 172 (600)
Q Consensus 143 --~~~~------~~g~~LiItvD-----~Gi~~~e~i~~a~~~ 172 (600)
.... ..++..-|+|| .|||+.+...-.+.+
T Consensus 83 ~~~~~~~~~~~~~~~t~ftvsvd~~~~~TGISa~DRa~Tir~L 125 (219)
T d1snna_ 83 VLRELYPNDIPYDEKSSFSITINHRKTFTGITDNDRAFTIKKL 125 (219)
T ss_dssp HHHHTCCTTCTTSSSCCEEEEEEETTCSSSCSHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 2112334567656775349986146777898677799999999
No 57
>d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]}
Probab=56.33 E-value=4.9 Score=16.66 Aligned_cols=28 Identities=25% Similarity=0.348 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf 6234555554179827996154476555
Q gi|254780901|r 161 TSYDALQYATNQGIDVIVIDHHQVKSEE 188 (600)
Q Consensus 161 ~~~e~i~~a~~~GidvIVtDHH~~~~~~ 188 (600)
++.++.+.|.+.|.|.|=+|=|.-.+..
T Consensus 17 NT~~a~~~A~~~G~~~iE~Dv~~TkDg~ 44 (240)
T d1zcca1 17 NTFAAADLALQQGADYIELDVRESADGV 44 (240)
T ss_dssp SSHHHHHHHHHTTCSEEEEEEEECTTCC
T ss_pred CHHHHHHHHHHCCCCEEEEEEEEECCCC
T ss_conf 1899999999849898999889914998
No 58
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]}
Probab=56.15 E-value=4.9 Score=16.64 Aligned_cols=79 Identities=13% Similarity=0.147 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEE-EECCCC--------CCC-CCCCHHHHHHHHHCC
Q ss_conf 9999999999779979999407886152899999999976994799-807874--------336-688978988742026
Q gi|254780901|r 80 KAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANM-YIPDRI--------VDG-YGPNPSLMEKFINEG 149 (600)
Q Consensus 80 ~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~-~IP~R~--------~eG-YGl~~~~i~~~~~~g 149 (600)
+.++++.+.|.+-++-+|+..+.+.-.-+...+.++...+|+-+.. ....+. .-| .|.......++.++
T Consensus 7 ~~ld~~~~~l~~A~rPvii~G~g~~~~~~~~~l~~lae~l~~pv~~t~~~~~~~~~~~~p~~~G~~~~~~~~~~~~l~~- 85 (160)
T d1q6za1 7 QDLDILVKALNSASNPAIVLGPDVDAANANADCVMLAERLKAPVWVAPSAPRCPFPTRHPCFRGLMPAGIAAISQLLEG- 85 (160)
T ss_dssp HHHHHHHHHHHHCSSCEEEECHHHHHTTCHHHHHHHHHHHTCCEEECSSCSBCCSCTTSTTEEEECCSCHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC-
T ss_conf 9999999999818997999895814132516899999865953886310036633444333000056576799999952-
Q ss_pred CCEEEEECCC
Q ss_conf 8689996488
Q gi|254780901|r 150 AQLIITVDCG 159 (600)
Q Consensus 150 ~~LiItvD~G 159 (600)
++|||.+.+.
T Consensus 86 aDlil~lG~~ 95 (160)
T d1q6za1 86 HDVVLVIGAP 95 (160)
T ss_dssp CSEEEEESSC
T ss_pred CCEEEEEECC
T ss_conf 9959999126
No 59
>d8abpa_ c.93.1.1 (A:) L-arabinose-binding protein {Escherichia coli [TaxId: 562]}
Probab=56.07 E-value=5 Score=16.63 Aligned_cols=71 Identities=10% Similarity=0.053 Sum_probs=44.4
Q ss_pred HHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC-HHHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf 9999769947998078743366889789887420268689996488762-34555554179827996154476555
Q gi|254780901|r 114 RFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTS-YDALQYATNQGIDVIVIDHHQVKSEE 188 (600)
Q Consensus 114 ~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~-~e~i~~a~~~GidvIVtDHH~~~~~~ 188 (600)
++.+..|.++.+.-++--. -..+.++.+...+++-||.+-...+. -+.++.+++.||.||..|+..++...
T Consensus 25 ~aa~~~G~~~i~~~~~d~~----~q~~~i~~li~~~vDgiIi~~~~~~~~~~~~~~a~~~giPVV~~d~~~~~~~~ 96 (305)
T d8abpa_ 25 KAGKDLGFEVIKIAVPDGE----KTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQFVNAKG 96 (305)
T ss_dssp HHHHHHTEEEEEEECCSHH----HHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCBCTTS
T ss_pred HHHHHCCCEEEEECCCCHH----HHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 9999739989998399999----99999999997599989983643336699999999659988997575444444
No 60
>d1tqxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Plasmodium falciparum [TaxId: 5833]}
Probab=56.02 E-value=5 Score=16.62 Aligned_cols=13 Identities=8% Similarity=0.202 Sum_probs=6.6
Q ss_pred CCHHHHHHHHHHH
Q ss_conf 4879999999999
Q gi|254780901|r 76 TDCDKAARRIVQA 88 (600)
Q Consensus 76 ~dm~~A~~ri~~a 88 (600)
.++++.++++.++
T Consensus 15 ~~l~~~i~~l~~~ 27 (221)
T d1tqxa_ 15 SKLAEETQRMESL 27 (221)
T ss_dssp GGHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999974
No 61
>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}
Probab=55.72 E-value=5 Score=16.58 Aligned_cols=76 Identities=13% Similarity=0.194 Sum_probs=46.1
Q ss_pred HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHH
Q ss_conf 97799799994078861528999999999769947998078743366889789887420268689996488762345555
Q gi|254780901|r 89 IYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQY 168 (600)
Q Consensus 89 i~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~ 168 (600)
++.+++|+|+| +-|+-.. ....++.+|+.+.+..- .++.-.+.+++-|.+-+|..+. ....+++..
T Consensus 26 ~~~g~~VlI~G---~G~iG~~--~~~~ak~~g~~~v~~~~--------~~~~k~~~a~~~Ga~~~i~~~~-~~~~~~i~~ 91 (174)
T d1f8fa2 26 VTPASSFVTWG---AGAVGLS--ALLAAKVCGASIIIAVD--------IVESRLELAKQLGATHVINSKT-QDPVAAIKE 91 (174)
T ss_dssp CCTTCEEEEES---CSHHHHH--HHHHHHHHTCSEEEEEE--------SCHHHHHHHHHHTCSEEEETTT-SCHHHHHHH
T ss_pred CCCCCEEEEEC---CCHHHHH--HHHCCCCCCCCEEEEEC--------CHHHHHHHHHHCCCEEEEECCC-CCHHHHHHH
T ss_conf 99998899967---8878864--54201102312035524--------6899999999729907970898-579999999
Q ss_pred HHHCCCCEEE
Q ss_conf 5417982799
Q gi|254780901|r 169 ATNQGIDVIV 178 (600)
Q Consensus 169 a~~~GidvIV 178 (600)
+..-|.|+++
T Consensus 92 ~t~gg~D~vi 101 (174)
T d1f8fa2 92 ITDGGVNFAL 101 (174)
T ss_dssp HTTSCEEEEE
T ss_pred HCCCCCCEEE
T ss_conf 7299973999
No 62
>d1mkza_ c.57.1.1 (A:) MoaB {Escherichia coli [TaxId: 562]}
Probab=55.65 E-value=5 Score=16.58 Aligned_cols=61 Identities=10% Similarity=0.146 Sum_probs=37.1
Q ss_pred EEEEECCCCCHH---HHHHHHHHHHHHCCCCEEE--EECCCCCCCCCCCHHHHHH-HHHCCCCEEEEECCCCCCH
Q ss_conf 999940788615---2899999999976994799--8078743366889789887-4202686899964887623
Q gi|254780901|r 95 IMIFGDYDVDGA---ASVALMMRFLSHCSVNANM--YIPDRIVDGYGPNPSLMEK-FINEGAQLIITVDCGSTSY 163 (600)
Q Consensus 95 I~I~gDyD~DGi---tstail~~~L~~~g~~v~~--~IP~R~~eGYGl~~~~i~~-~~~~g~~LiItvD~Gi~~~ 163 (600)
|...+|. =|. +|..+|...|+..|.++.. .+|+...+ -...+.. ..+.++++|||. |-++.
T Consensus 13 iitvsD~--~g~~~D~nGp~L~~~l~~~G~~v~~~~iv~Dd~~~----~~~~l~~~~~~~~~dlIiTt--GGtg~ 79 (170)
T d1mkza_ 13 ILTVSNR--RGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYA----IRAQVSAWIASDDVQVVLIT--GGTGL 79 (170)
T ss_dssp EEEECSS--CCGGGCHHHHHHHHHHHHTTCEEEEEEEECSCHHH----HHHHHHHHHHSSSCCEEEEE--SCCSS
T ss_pred EEEECCC--CCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCHHH----HHHHHHHHHHCCCCEEEEEE--EEECC
T ss_conf 9997288--98677776999999999879978775551787799----99999765530564488884--00034
No 63
>d1j4aa2 c.23.12.1 (A:2-103,A:301-332) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}
Probab=55.07 E-value=5.1 Score=16.51 Aligned_cols=42 Identities=12% Similarity=0.231 Sum_probs=30.3
Q ss_pred CCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEE
Q ss_conf 6889789887420268689996488762345555541798279
Q gi|254780901|r 135 YGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVI 177 (600)
Q Consensus 135 YGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvI 177 (600)
..++.+.++.++..+.++|.+.-.|..+.+ +++|+++||.|-
T Consensus 55 ~~i~~eil~~l~~~~LK~I~~~~vG~d~ID-~~aa~~~gI~V~ 96 (134)
T d1j4aa2 55 LDYIAETLQALADNGITKMSLRNVGVDNID-MAKAKELGFQIT 96 (134)
T ss_dssp SCBCHHHHHHHHHTTCCEEEESSSCCTTBC-HHHHHHTTCEEE
T ss_pred CCCCHHHHHHHCCCCEEEEEECCCCCCCCC-HHHHHHCCEEEE
T ss_conf 874999995400257169998367767668-899985986999
No 64
>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}
Probab=54.31 E-value=5.3 Score=16.42 Aligned_cols=113 Identities=14% Similarity=0.154 Sum_probs=53.2
Q ss_pred HHHHHCCCCHHHHHHHCCCCHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCC-CHHHHHHHHHHHHHHCCCCE
Q ss_conf 99996788978988661966777189955614879999999999977997999940788-61528999999999769947
Q gi|254780901|r 45 RVLVNRNVSIDYAKDFLNPSIRLLMPDPLILTDCDKAARRIVQAIYNSEKIMIFGDYDV-DGAASVALMMRFLSHCSVNA 123 (600)
Q Consensus 45 ~iL~~Rgi~~~~~~~fL~p~l~~l~~dP~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~-DGitstail~~~L~~~g~~v 123 (600)
.++++||-+-.-++..++--.-....+.| |+=+| +.+|.+.+++|.|.|.... +|. ..+=..++.++
T Consensus 53 DviISRG~ta~~ir~~~~iPVV~I~vs~~---Dil~a---l~~a~~~~~kiavV~~~~~~~~~------~~~~~ll~~~i 120 (186)
T d2pjua1 53 DAIIAAGSNGAYLKSRLSVPVILIKPSGY---DVLQF---LAKAGKLTSSIGVVTYQETIPAL------VAFQKTFNLRL 120 (186)
T ss_dssp SEEEEEHHHHHHHHTTCSSCEEEECCCHH---HHHHH---HHHTTCTTSCEEEEEESSCCHHH------HHHHHHHTCCE
T ss_pred CEEEECCHHHHHHHHHCCCCEEEECCCHH---HHHHH---HHHHHHHCCCEEEEECCCCCHHH------HHHHHHHCCCE
T ss_conf 89997963899999868998799708876---89999---99999758978999177625699------99999959964
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEE
Q ss_conf 99807874336688978988742026868999648876234555554179827996
Q gi|254780901|r 124 NMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVI 179 (600)
Q Consensus 124 ~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVt 179 (600)
..|.-+.-.| -...+++++++|++.+| | +.-.+++|++.|+.-+.+
T Consensus 121 ~~~~~~~~~e----~~~~v~~l~~~G~~vVV----G--~~~~~~~A~~~Gl~~vli 166 (186)
T d2pjua1 121 DQRSYITEED----ARGQINELKANGTEAVV----G--AGLITDLAEEAGMTGIFI 166 (186)
T ss_dssp EEEEESSHHH----HHHHHHHHHHTTCCEEE----E--SHHHHHHHHHTTSEEEES
T ss_pred EEEEECCHHH----HHHHHHHHHHCCCCEEE----C--CHHHHHHHHHCCCCEEEE
T ss_conf 8999638899----99999999987998999----9--859999999849978998
No 65
>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=53.89 E-value=5.3 Score=16.37 Aligned_cols=101 Identities=13% Similarity=0.138 Sum_probs=60.6
Q ss_pred CCCHHHHHHHHHHHH-HCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 148799999999999-7799799994078861528999999999769947998078743366889789887420268689
Q gi|254780901|r 75 LTDCDKAARRIVQAI-YNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLI 153 (600)
Q Consensus 75 l~dm~~A~~ri~~ai-~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~Li 153 (600)
-.+...+...+..++ ..+.+|+|..-+= -+ ....++..|.++.. +|....++||++.+.+++...++++++
T Consensus 92 t~G~~~~l~~~~~~l~~~gd~vlv~~P~y-~~------~~~~~~~~g~~~~~-~~~~~~~~~~~d~~~l~~~~~~~~~~i 163 (388)
T d1gdea_ 92 LLGANQAFLMGLSAFLKDGEEVLIPTPAF-VS------YAPAVILAGGKPVE-VPTYEEDEFRLNVDELKKYVTDKTRAL 163 (388)
T ss_dssp ESSTTHHHHHHHTTTCCTTCEEEEEESCC-TT------HHHHHHHHTCEEEE-EECCGGGTTCCCHHHHHHHCCTTEEEE
T ss_pred CCCCCHHHHHHHHHHCCCCCEEEECCCCC-HH------HHHHHHHCCCEEEE-EECCCCCCCCCCHHHHHHHCCCCCEEE
T ss_conf 36753588999998658979899889984-88------99999985998999-514556687879999997375687599
Q ss_pred EEEC----CCCC-CHHH----HHHHHHCCCCEEEECCCC
Q ss_conf 9964----8876-2345----555541798279961544
Q gi|254780901|r 154 ITVD----CGST-SYDA----LQYATNQGIDVIVIDHHQ 183 (600)
Q Consensus 154 ItvD----~Gi~-~~e~----i~~a~~~GidvIVtDHH~ 183 (600)
+.+. +|.. +.++ ++.|++.|+-||+=|-|.
T Consensus 164 ~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~ 202 (388)
T d1gdea_ 164 IINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYE 202 (388)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf 989996988886899999999999998699999970886
No 66
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}
Probab=52.91 E-value=4.9 Score=16.69 Aligned_cols=25 Identities=24% Similarity=0.256 Sum_probs=11.6
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 97999940788615289999999997699
Q gi|254780901|r 93 EKIMIFGDYDVDGAASVALMMRFLSHCSV 121 (600)
Q Consensus 93 ekI~I~gDyD~DGitstail~~~L~~~g~ 121 (600)
=||+|.= |-.+...++...|+..|.
T Consensus 7 ~kILiVD----D~~~~~~~l~~~L~~~g~ 31 (129)
T d1p6qa_ 7 IKVLIVD----DQVTSRLLLGDALQQLGF 31 (129)
T ss_dssp CCEEEEC----SSHHHHHHHHHHHHTTTC
T ss_pred CEEEEEE----CCHHHHHHHHHHHHHCCC
T ss_conf 7899997----989999999999998799
No 67
>d1di6a_ c.57.1.1 (A:) MogA {Escherichia coli [TaxId: 562]}
Probab=52.29 E-value=5.6 Score=16.19 Aligned_cols=61 Identities=16% Similarity=0.324 Sum_probs=37.4
Q ss_pred EEEEECCCCCHH---HHHHHHHHHHHHCCCC---EEE-EECCCCCCCCCCCHHHHHHHH-HCCCCEEEEECCCCC
Q ss_conf 999940788615---2899999999976994---799-807874336688978988742-026868999648876
Q gi|254780901|r 95 IMIFGDYDVDGA---ASVALMMRFLSHCSVN---ANM-YIPDRIVDGYGPNPSLMEKFI-NEGAQLIITVDCGST 161 (600)
Q Consensus 95 I~I~gDyD~DGi---tstail~~~L~~~g~~---v~~-~IP~R~~eGYGl~~~~i~~~~-~~g~~LiItvD~Gi~ 161 (600)
|...+|--.-|. +|+.++.+.|+..|.. +.| .||+.... + ...+.++. +.++++|||. |=+
T Consensus 7 VITvSD~~~~G~~~D~sGp~l~~~L~~~g~~~~~v~~~IVpDd~~~---I-~~~l~~~~~~~~~DlIlTT--GGT 75 (190)
T d1di6a_ 7 LVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAI---I-EQTLCELVDEMSCHLVLTT--GGT 75 (190)
T ss_dssp EEEEECC-------CCHHHHHHHHHHHHBCSCEEEEEEEEESCHHH---H-HHHHHHHHHTSCCSEEEEE--SCC
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCHHH---H-HHHHHHHHHCCCCEEEEEC--CCC
T ss_conf 9996888767987777099999999974997548788897986889---9-9999999732486199955--774
No 68
>d1m65a_ c.6.3.1 (A:) Hypothetical protein YcdX {Escherichia coli [TaxId: 562]}
Probab=52.22 E-value=3.7 Score=17.59 Aligned_cols=27 Identities=22% Similarity=0.420 Sum_probs=15.9
Q ss_pred CCCCCCH-HHHHHHHHCCCCEE-EECCCC
Q ss_conf 4887623-45555541798279-961544
Q gi|254780901|r 157 DCGSTSY-DALQYATNQGIDVI-VIDHHQ 183 (600)
Q Consensus 157 D~Gi~~~-e~i~~a~~~GidvI-VtDHH~ 183 (600)
|+|.+.. +-++.|+++|++.| ||||-.
T Consensus 13 ~dg~~~~~e~v~~A~~~Gl~~iaiTDH~~ 41 (244)
T d1m65a_ 13 THAYSTLSDYIAQAKQKGIKLFAITDHGP 41 (244)
T ss_dssp TTCCCCHHHHHHHHHHHTCCEEEEEEECT
T ss_pred CCCCCCHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 99758799999999987999999837987
No 69
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=51.97 E-value=5.7 Score=16.16 Aligned_cols=94 Identities=16% Similarity=0.174 Sum_probs=57.8
Q ss_pred CCCCEEEEECCCCCHHHHHH--HHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCC-CHHHHH
Q ss_conf 79979999407886152899--999999976994799807874336688978988742026868999648876-234555
Q gi|254780901|r 91 NSEKIMIFGDYDVDGAASVA--LMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGST-SYDALQ 167 (600)
Q Consensus 91 ~~ekI~I~gDyD~DGitsta--il~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~-~~e~i~ 167 (600)
+.+||.+....--+..-+.. =+..+.+.+|.++.++-|...+- --..+.++.+...+++-||.+-.... ....+.
T Consensus 2 ~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~v~~~~~~~~d~--~~q~~~i~~~i~~~~dgIIi~~~~~~~~~~~~~ 79 (316)
T d1tjya_ 2 SAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPTEPSV--SGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALK 79 (316)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCEEEECCCSSCCH--HHHHHHHHHHHHTTCSEEEECCSSSSTTHHHHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCH--HHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH
T ss_conf 788999993899998999999999999998199799997999999--999999999996599866411443201245566
Q ss_pred HHHHCCCCEEEECCCCCCC
Q ss_conf 5541798279961544765
Q gi|254780901|r 168 YATNQGIDVIVIDHHQVKS 186 (600)
Q Consensus 168 ~a~~~GidvIVtDHH~~~~ 186 (600)
.+++.|+-|+..|...++.
T Consensus 80 ~a~~~gi~vv~~d~~~~~~ 98 (316)
T d1tjya_ 80 RAMQRGVKILTWDSDTKPE 98 (316)
T ss_dssp HHHHTTCEEEEESSCCCGG
T ss_pred HHHCCCCCCEECCCCCCCC
T ss_conf 5421465411114533222
No 70
>d2ftsa3 c.57.1.2 (A:499-653) Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=51.82 E-value=5.7 Score=16.14 Aligned_cols=84 Identities=13% Similarity=0.111 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHCCCCEEEE--ECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCC--CHHHHHHHH--HCCCCEEEEC
Q ss_conf 28999999999769947998--07874336688978988742026868999648876--234555554--1798279961
Q gi|254780901|r 107 ASVALMMRFLSHCSVNANMY--IPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGST--SYDALQYAT--NQGIDVIVID 180 (600)
Q Consensus 107 tstail~~~L~~~g~~v~~~--IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~--~~e~i~~a~--~~GidvIVtD 180 (600)
|-+..|...|+.+|.++.++ +||... .-.++++++.+ .+++|||. -|++ ..+-+..+- +.+.+++.
T Consensus 27 sN~~~l~~~l~~~G~~v~~~~~v~Dd~~----~i~~~l~~~~~-~~Dliitt-GG~s~g~~D~~~~~l~~~~~~~~~f-- 98 (155)
T d2ftsa3 27 SNRSTLLATIQEHGYPTINLGIVGDNPD----DLLNALNEGIS-RADVIITS-GGVSMGEKDYLKQVLDIDLHAQIHF-- 98 (155)
T ss_dssp CHHHHHHHHHHTTTCCEEEEEEECSSHH----HHHHHHHHHHH-HCSEEEEE-SCCSSSCCHHHHHHHHTTTCCEEEE--
T ss_pred CHHHHHHHHHCCCCCCEEEEEEECCCHH----HHHHHHHHHHC-CCCEEEEE-CCCCCCCCHHHHHHHHHHCCEEEEE--
T ss_conf 6199999973345655178888447614----77999998650-46779983-4666774045599997302303553--
Q ss_pred CCC-CCCCCCCCEEEECCC
Q ss_conf 544-765556725652378
Q gi|254780901|r 181 HHQ-VKSEEIPAYALVNPN 198 (600)
Q Consensus 181 HH~-~~~~~p~a~aivNP~ 198 (600)
|.. ...-.|-..+.+.+.
T Consensus 99 ~~v~~~PG~p~~~g~~~~~ 117 (155)
T d2ftsa3 99 GRVFMKPGLPTTFATLDID 117 (155)
T ss_dssp SEEECBSCTTCEEEEEEET
T ss_pred CHHHHHHCCHHHEEECCCC
T ss_conf 2134430222122431457
No 71
>d2nqra3 c.57.1.2 (A:178-326) MoeA, central domain {Escherichia coli [TaxId: 562]}
Probab=51.32 E-value=5.8 Score=16.08 Aligned_cols=84 Identities=12% Similarity=0.088 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHCCCCEEEE--ECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCC--CHHHHH-HHHHCCCCEEEECC
Q ss_conf 28999999999769947998--07874336688978988742026868999648876--234555-55417982799615
Q gi|254780901|r 107 ASVALMMRFLSHCSVNANMY--IPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGST--SYDALQ-YATNQGIDVIVIDH 181 (600)
Q Consensus 107 tstail~~~L~~~g~~v~~~--IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~--~~e~i~-~a~~~GidvIVtDH 181 (600)
|-+.+|..+|+.+|+++.++ +|+..++ -.++++++.+ .+++|||. -|++ ..+-+. .+.++| ++ +.+.
T Consensus 27 sN~~~l~~~l~~~G~~v~~~~~v~Dd~~~----i~~~l~~~~~-~~Divitt-GG~s~g~~D~~~~~l~~~G-~i-~~~~ 98 (149)
T d2nqra3 27 TNRLAVHLMLEQLGCEVINLGIIRDDPHA----LRAAFIEADS-QADVVISS-GGVSVGEADYTKTILEELG-EI-AFWK 98 (149)
T ss_dssp CHHHHHHHHHHHTTCEEEEEEEECSSHHH----HHHHHHHHHH-HCSEEEEC-SSSCSSSCSHHHHHHHHHS-EE-EEEE
T ss_pred CCHHHHHHHHHHCCEEEEECCCCCCHHHH----HHHHHHHCCC-CCCEEEEC-CCCCCCCHHHHHHHHHHCC-CE-EEEC
T ss_conf 64688886453322599991410874999----9999874034-55889980-7866781488999999759-82-3503
Q ss_pred CCCCCCCCCCEEEECCC
Q ss_conf 44765556725652378
Q gi|254780901|r 182 HQVKSEEIPAYALVNPN 198 (600)
Q Consensus 182 H~~~~~~p~a~aivNP~ 198 (600)
=....-.|-.++.++-+
T Consensus 99 v~~~PG~p~~~~~~~~~ 115 (149)
T d2nqra3 99 LAIKPGKPFAFGKLSNS 115 (149)
T ss_dssp BSEESCCEEEEEECSSS
T ss_pred CCCCCCCCCCEEECCCC
T ss_conf 02003776301101577
No 72
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}
Probab=50.90 E-value=5.9 Score=16.04 Aligned_cols=44 Identities=27% Similarity=0.560 Sum_probs=27.3
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 79999407886152899999999976994799807874336688978988742026
Q gi|254780901|r 94 KIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEG 149 (600)
Q Consensus 94 kI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g 149 (600)
+|+|+| + |..++++... |+..|..+..+ ||-.|.+.++.+++.+
T Consensus 3 ~I~IIG---~-G~mG~sla~~-L~~~g~~~~I~-------~~D~~~~~~~~a~~~~ 46 (171)
T d2g5ca2 3 NVLIVG---V-GFMGGSFAKS-LRRSGFKGKIY-------GYDINPESISKAVDLG 46 (171)
T ss_dssp EEEEES---C-SHHHHHHHHH-HHHTTCCSEEE-------EECSCHHHHHHHHHTT
T ss_pred EEEEEC---C-CHHHHHHHHH-HHHCCCCEEEE-------EEECCHHHHHHHHHHH
T ss_conf 899994---1-9899999999-99639970899-------9979868899999841
No 73
>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=50.87 E-value=5.9 Score=16.03 Aligned_cols=41 Identities=29% Similarity=0.565 Sum_probs=26.3
Q ss_pred HHHHHHHCCCC-EEEEECCCCCCHHHHHHHHHCCCCEEEECCCC
Q ss_conf 98874202686-89996488762345555541798279961544
Q gi|254780901|r 141 LMEKFINEGAQ-LIITVDCGSTSYDALQYATNQGIDVIVIDHHQ 183 (600)
Q Consensus 141 ~i~~~~~~g~~-LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~ 183 (600)
+++++.+.|.+ +++.--.|-++....+.+ .|+++||.-||.
T Consensus 24 a~~rA~Elgi~~iVvAStsG~TA~~~~e~~--~g~~lvvVth~~ 65 (190)
T d1vp8a_ 24 AVERAKELGIKHLVVASSYGDTAMKALEMA--EGLEVVVVTYHT 65 (190)
T ss_dssp HHHHHHHHTCCEEEEECSSSHHHHHHHHHC--TTCEEEEEECCT
T ss_pred HHHHHHHCCCCEEEEEECCCHHHHHHHHHH--CCCEEEEEECCC
T ss_conf 999998769975999817867999999984--597299995636
No 74
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=49.87 E-value=4.4 Score=17.07 Aligned_cols=15 Identities=7% Similarity=0.115 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHCCC
Q ss_conf 289999999997699
Q gi|254780901|r 107 ASVALMMRFLSHCSV 121 (600)
Q Consensus 107 tstail~~~L~~~g~ 121 (600)
+...++.+.|+..|.
T Consensus 15 ~~r~~i~~~L~~~g~ 29 (128)
T d1jbea_ 15 TMRRIVRNLLKELGF 29 (128)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCC
T ss_conf 999999999998799
No 75
>d1tuga1 c.78.1.1 (A:1-150,A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}
Probab=49.85 E-value=6.1 Score=15.92 Aligned_cols=19 Identities=11% Similarity=0.057 Sum_probs=7.6
Q ss_pred EEEECCCCCCCCCCCCCHH
Q ss_conf 5652378888643344304
Q gi|254780901|r 192 YALVNPNRLDDLSGQGHLC 210 (600)
Q Consensus 192 ~aivNP~~~~~~~p~~~l~ 210 (600)
+.|||--..+...|...|+
T Consensus 122 vPVINAg~~~~~HP~Q~La 140 (310)
T d1tuga1 122 VPVLNAGDGSNQHPTQTLL 140 (310)
T ss_dssp SCEEEEEETTSCCHHHHHH
T ss_pred CCEEECCCCCCCCHHHHHH
T ss_conf 3077778786403688998
No 76
>d1pvda2 c.36.1.5 (A:2-181) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=49.47 E-value=6.2 Score=15.88 Aligned_cols=70 Identities=10% Similarity=0.006 Sum_probs=37.3
Q ss_pred HHHHHCCHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
Q ss_conf 67743062333121222210020342589999999999899999999999999999998752112434750262057858
Q gi|254780901|r 300 MIGPSINAGGRIGESNLGSRLLISDDSQELEMLAMKLDVLNQNRRLMESAMLEQAEAKVLTQCDDIQQASVIVVEGDRWH 379 (600)
Q Consensus 300 ~iaPrINAaGRl~~a~~av~lL~~~d~~~a~~la~~L~~lN~~Rk~~e~~i~~~a~~~~~~~~~~~~~~~~ivv~~~~wh 379 (600)
.+.|.++|..| ...+++..+.++..|--.|.- +. ++ ...+++++. . -
T Consensus 28 ~~~~l~~al~~----~~~i~~i~~~~E~~A~~~A~g---------------ya----r~-------t~~~~v~~t-~--G 74 (180)
T d1pvda2 28 FNLSLLDKIYE----VEGMRWAGNANELNAAYAADG---------------YA----RI-------KGMSCIITT-F--G 74 (180)
T ss_dssp TTHHHHHGGGG----STTCEECCCSCHHHHHHHHHH---------------HH----HH-------HSCEEEEEE-T--T
T ss_pred CHHHHHHHHHH----HCCEEEEEECCCCHHHHHHHH---------------HH----HC-------CCCCEEEEC-C--C
T ss_conf 27999999987----266378654256424678887---------------76----40-------487525523-5--6
Q ss_pred HHHHHHHHHHHHHHH--HCEEEEEEE
Q ss_conf 122222278998842--010799886
Q gi|254780901|r 380 PGIVGLLAARLKEKF--GRPSFAISF 403 (600)
Q Consensus 380 ~GViGIVAsrL~e~y--~kP~iv~s~ 403 (600)
+|+.-.+.+ |++.| +-|+++++-
T Consensus 75 pG~~N~~~g-l~~A~~~~~P~l~i~g 99 (180)
T d1pvda2 75 VGELSALNG-IAGSYAEHVGVLHVVG 99 (180)
T ss_dssp HHHHHHHHH-HHHHHHHTCCEEEEEE
T ss_pred CCCCHHHHH-HHHHHHHCCCEEEEEC
T ss_conf 664205588-9998850251799805
No 77
>d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]}
Probab=47.83 E-value=6.5 Score=15.69 Aligned_cols=79 Identities=22% Similarity=0.352 Sum_probs=52.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC---------HHHHHHHHHCCCCEEEEECCCCCCHH
Q ss_conf 799994078861528999999999769947998078743366889---------78988742026868999648876234
Q gi|254780901|r 94 KIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPN---------PSLMEKFINEGAQLIITVDCGSTSYD 164 (600)
Q Consensus 94 kI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~---------~~~i~~~~~~g~~LiItvD~Gi~~~e 164 (600)
||.|| | -|+-+-+++.+..+.+-..-..|+-|.-.-.||-- .+.++.+.+.++++|+. =|.+.+..
T Consensus 2 kIgif---D-SGiGGLtVl~~l~~~lP~~~~iY~~D~a~~PYG~ks~~~I~~~~~~~~~~l~~~~~~~iVi-ACNTaS~~ 76 (105)
T d1b74a1 2 KIGIF---D-SGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKGVDIIVV-ACNTASAY 76 (105)
T ss_dssp EEEEE---E-SSSTHHHHHHHHHHHSSSCEEEEEECGGGCCGGGSCHHHHHHHHHHHHHHHHTTTCSEEEE-CCHHHHHH
T ss_pred EEEEE---E-CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE-ECCCHHHH
T ss_conf 79998---3-8978799999999978999879985688798898999999999999999999749998998-05717899
Q ss_pred HHHHHHHC-CCCEE
Q ss_conf 55555417-98279
Q gi|254780901|r 165 ALQYATNQ-GIDVI 177 (600)
Q Consensus 165 ~i~~a~~~-GidvI 177 (600)
+++.+++. .+.++
T Consensus 77 al~~lr~~~~~Pii 90 (105)
T d1b74a1 77 ALERLKKEINVPVF 90 (105)
T ss_dssp HHHHHHHHSSSCEE
T ss_pred HHHHHHHHCCCCEE
T ss_conf 99999987899999
No 78
>d1a2oa1 c.23.1.1 (A:1-140) Methylesterase CheB, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=47.67 E-value=6.6 Score=15.68 Aligned_cols=49 Identities=16% Similarity=0.264 Sum_probs=28.2
Q ss_pred HHHHHHHHHC-CC-CEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCC
Q ss_conf 7898874202-68-6899964887623455555417982799615447655567
Q gi|254780901|r 139 PSLMEKFINE-GA-QLIITVDCGSTSYDALQYATNQGIDVIVIDHHQVKSEEIP 190 (600)
Q Consensus 139 ~~~i~~~~~~-g~-~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~~~~~~p~ 190 (600)
...+..+.+. |. ..+-|+. +..++++.+.+...|+|++|-+.|.-....
T Consensus 16 r~~l~~~L~~~g~~~~v~~a~---~g~~al~~~~~~~pDlvllDi~MP~~dG~e 66 (140)
T d1a2oa1 16 RQIMTEIINSHSDMEMVATAP---DPLVARDLIKKFNPDVLTLDVEMPRMDGLD 66 (140)
T ss_dssp HHHHHHHHHTSTTEEEEEEES---SHHHHHHHHHHHCCSEEEEECCCSSSCHHH
T ss_pred HHHHHHHHHHCCCEEEEEEEC---CHHHHHHHHHHCCCCEEEECCCCCCCCHHH
T ss_conf 999999999689918999979---999999999845989999758889998899
No 79
>d2gy9b1 c.23.15.1 (B:8-225) Ribosomal protein S2 {Escherichia coli [TaxId: 562]}
Probab=47.55 E-value=6.6 Score=15.66 Aligned_cols=97 Identities=19% Similarity=0.243 Sum_probs=64.7
Q ss_pred HCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHH-------
Q ss_conf 6148799999999999779979999407886152899999999976994799807874336688978988742-------
Q gi|254780901|r 74 ILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFI------- 146 (600)
Q Consensus 74 ~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~------- 146 (600)
.+.-+.+|...+.+...++.+|++.|--- - +.-++.++.+..+ .+||..|.--|---|-..+.+-.
T Consensus 38 T~~~L~~A~~~l~~~~~~~g~iLfVgTk~---~-~~~~i~~~a~~~~---~~yvn~rWlgG~LTN~~~i~~~i~~l~~l~ 110 (218)
T d2gy9b1 38 TVPMFNEALAELNKIASRKGKILFVGTKR---A-ASEAVKDAALSCD---QFFVNHRWLGGMLTNWKTVRQSIKRLKDLE 110 (218)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEECCST---T-SHHHHHHHHHHTT---CEEECSCCCTTTTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCH---H-HHHHHHHHHHHCC---CCEECCEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999988640898699983563---3-4499999998619---823032465681344434234778899988
Q ss_pred ---------------------------H---------CCCCEEEEECCCCCCHHHHHHHHHCCCCEEE
Q ss_conf ---------------------------0---------2686899964887623455555417982799
Q gi|254780901|r 147 ---------------------------N---------EGAQLIITVDCGSTSYDALQYATNQGIDVIV 178 (600)
Q Consensus 147 ---------------------------~---------~g~~LiItvD~Gi~~~e~i~~a~~~GidvIV 178 (600)
. .-++++|.+|.. ...-++..|+.+||-+|=
T Consensus 111 ~~~~~~~~~~~~Kke~~~~~~~~~kl~~~~~Gi~~m~~lPd~vii~d~~-~~~~ai~Ea~~l~IP~I~ 177 (218)
T d2gy9b1 111 TQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDAD-HEHIAIKEANNLGIPVFA 177 (218)
T ss_dssp HHHSSTTSSSSCHHHHHHHHHHHHHHHHHSSSGGGCCCCCCEEEESCTT-TTHHHHHHHHHTTCCEEE
T ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC-CCHHHHHHHHHCCCCEEE
T ss_conf 7751475245624889998999999998606856777787145641664-118999999875997799
No 80
>d1uz5a3 c.57.1.2 (A:181-328) MoeA, central domain {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]}
Probab=47.04 E-value=6.7 Score=15.61 Aligned_cols=80 Identities=14% Similarity=0.162 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHCCCCEEEE--ECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHH---H-HHHHHCCCCEEEEC
Q ss_conf 28999999999769947998--078743366889789887420268689996488762345---5-55541798279961
Q gi|254780901|r 107 ASVALMMRFLSHCSVNANMY--IPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDA---L-QYATNQGIDVIVID 180 (600)
Q Consensus 107 tstail~~~L~~~g~~v~~~--IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~---i-~~a~~~GidvIVtD 180 (600)
|.+..|...|+++|.++.++ +|+... .-.+++++..++ +++|||. |-++..+ + +...++| ++++
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~~v~Dd~~----~i~~~i~~~~~~-~DliItt--GG~s~g~~D~~~~~l~~~g-~~~~-- 96 (148)
T d1uz5a3 27 INGRALCDAINELGGEGIFMGVARDDKE----SLKALIEKAVNV-GDVVVIS--GGASGGTKDLTASVIEELG-EVKV-- 96 (148)
T ss_dssp CHHHHHHHHHHHHTSEEEEEEEECSSHH----HHHHHHHHHHHH-CSEEEEE--CCC-----CHHHHHHHHHS-EEEE--
T ss_pred CCHHHHHHHHHCCCCCCEEEEEECCHHH----HHHHHHHHHHCC-CCEEEEC--CCCCCCHHHHHHHHHHHCC-CHHH--
T ss_conf 7739899755314533045466064788----888999864134-6689987--8755541467999999818-2250--
Q ss_pred CCCC-CCCCCCCEEEEC
Q ss_conf 5447-655567256523
Q gi|254780901|r 181 HHQV-KSEEIPAYALVN 196 (600)
Q Consensus 181 HH~~-~~~~p~a~aivN 196 (600)
|-.. ..-.|-..+.+|
T Consensus 97 ~~v~i~PG~p~~~g~~~ 113 (148)
T d1uz5a3 97 HGIAIQPGKPTIIGVIK 113 (148)
T ss_dssp ECBSEESCTTCEEEEET
T ss_pred HHHHHHHCCCEEEEEEC
T ss_conf 46688723742552259
No 81
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=45.71 E-value=7 Score=15.46 Aligned_cols=35 Identities=23% Similarity=0.513 Sum_probs=24.4
Q ss_pred CCCEEEEECCCCC----CHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 6868999648876----23455555417982799615447
Q gi|254780901|r 149 GAQLIITVDCGST----SYDALQYATNQGIDVIVIDHHQV 184 (600)
Q Consensus 149 g~~LiItvD~Gi~----~~e~i~~a~~~GidvIVtDHH~~ 184 (600)
.+|+|| |-.|.+ +.++.+++++.|.+|+|++-=.+
T Consensus 21 e~DVlI-IG~G~AGl~AA~~aa~~~~~~G~~V~vieK~~~ 59 (356)
T d1jnra2 21 ETDILI-IGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 59 (356)
T ss_dssp ECSEEE-ECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ECCEEE-ECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 649899-898889999999999978867697999967889
No 82
>d1jlja_ c.57.1.1 (A:) Gephyrin N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.71 E-value=7 Score=15.46 Aligned_cols=46 Identities=17% Similarity=0.216 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHH---CCCCEEEE--ECCCCCCCCCCCHHHHHH-HHHCCCCEEEEE
Q ss_conf 289999999997---69947998--078743366889789887-420268689996
Q gi|254780901|r 107 ASVALMMRFLSH---CSVNANMY--IPDRIVDGYGPNPSLMEK-FINEGAQLIITV 156 (600)
Q Consensus 107 tstail~~~L~~---~g~~v~~~--IP~R~~eGYGl~~~~i~~-~~~~g~~LiItv 156 (600)
++...|.+.|+. .|.++..+ ||+...+ -.+++.+ ..+.++++|||.
T Consensus 22 ~ng~~L~~~l~~~~~~G~~v~~~~iV~Dd~~~----i~~al~~~~~~~~~D~ViTt 73 (169)
T d1jlja_ 22 RSGINLKDLVQDPSLLGGTISAYKIVPDEIEE----IKETLIDWCDEKELNLILTT 73 (169)
T ss_dssp HHHHHHHHHHHCTTTTCCEEEEEEEECSCHHH----HHHHHHHHHHTSCCSEEEEE
T ss_pred CCHHHHHHHHHHHCCCCCEEEEEEEECCCHHH----HHHHHHHHHHCCCCCEEEEE
T ss_conf 64999999999650279589999996231136----78899987413566389982
No 83
>d1ozha2 c.36.1.5 (A:7-187) Catabolic acetolactate synthase {Klebsiella pneumoniae [TaxId: 573]}
Probab=45.13 E-value=7.1 Score=15.40 Aligned_cols=129 Identities=12% Similarity=0.095 Sum_probs=61.5
Q ss_pred HHHHCCHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCH
Q ss_conf 77430623331212222100203425899999999998999999999999999999987521124347502620578581
Q gi|254780901|r 301 IGPSINAGGRIGESNLGSRLLISDDSQELEMLAMKLDVLNQNRRLMESAMLEQAEAKVLTQCDDIQQASVIVVEGDRWHP 380 (600)
Q Consensus 301 iaPrINAaGRl~~a~~av~lL~~~d~~~a~~la~~L~~lN~~Rk~~e~~i~~~a~~~~~~~~~~~~~~~~ivv~~~~wh~ 380 (600)
..|.++|.-+ ..+++..+.++..|--.|.- -.++. ..+..++... -+
T Consensus 31 ~~~l~~al~~-----~~i~~i~~~hE~~A~~~A~g-------------------yar~t-------g~~gv~~~t~--Gp 77 (181)
T d1ozha2 31 IDKVFDSLLD-----SSIRIIPVRHEANAAFMAAA-------------------VGRIT-------GKAGVALVTS--GP 77 (181)
T ss_dssp THHHHHHGGG-----SSSEEEECSSHHHHHHHHHH-------------------HHHHH-------SSCEEEEECS--TH
T ss_pred HHHHHHHHHH-----HHCCCCCCCCCHHHHHHHHH-------------------HHHHC-------CCCCCEEECC--CH
T ss_conf 8999999986-----40112443300778999999-------------------98703-------9842022123--51
Q ss_pred HHHHHHHHHHHHHH--HCEEEEEEECCC--CEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHH
Q ss_conf 22222278998842--010799886379--83799986489861888888530335301156532223146422215889
Q gi|254780901|r 381 GIVGLLAARLKEKF--GRPSFAISFEED--GKGIGSGRSIEGFDIGKMVSFAVEEGILVKGGGHAMAAGLTVERVNFGRL 456 (600)
Q Consensus 381 GViGIVAsrL~e~y--~kP~iv~s~~~d--g~~kGS~RSi~g~~l~~~l~~~~~~~ll~~~GGH~~AaG~ti~~~~l~~f 456 (600)
|+.-.+.+ |.+.| +.|+++++-... ...++ ....+|...++..+ .+ .+....+.+++
T Consensus 78 G~~n~~~g-i~~A~~~~~Pvl~isg~~~~~~~~~~---~~q~~d~~~~~~~~------tk---------~~~~v~~~~~~ 138 (181)
T d1ozha2 78 GCSNLITG-MATANSEGDPVVALGGAVKRADKAKQ---VHQSMDTVAMFSPV------TK---------YAIEVTAPDAL 138 (181)
T ss_dssp HHHTTHHH-HHHHHHHTCCEEEEEEECCTTTC---------CCCHHHHHGGG------CS---------EEEECCSGGGH
T ss_pred HHHHHHHH-HHHHHHCCCCEEEEECCCCHHHCCCC---CCCCCCCCCCCCCC------CH---------HEECCCCHHHH
T ss_conf 35544366-78776438862466214661112542---32222110135662------01---------10116751689
Q ss_pred HHHHHHHHHHHCCHHHCCCCEEEEEEE
Q ss_conf 999999998622644337714760443
Q gi|254780901|r 457 CDFFQKFAHNIVPALITTPVFKIDGVL 483 (600)
Q Consensus 457 ~~~l~~~~~~~~~~~~~~~~l~iD~el 483 (600)
.+.+.+.+...... ..-...+|...
T Consensus 139 ~~~l~~A~~~A~~~--~~GPV~l~iP~ 163 (181)
T d1ozha2 139 AEVVSNAFRAAEQG--RPGSAFVSLPQ 163 (181)
T ss_dssp HHHHHHHHHHHHSS--SCCEEEEEEEH
T ss_pred HHHHHHHHHHHHHC--CCCCEEEECCH
T ss_conf 99999999998529--99519999283
No 84
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=44.82 E-value=7.2 Score=15.36 Aligned_cols=27 Identities=19% Similarity=0.274 Sum_probs=15.3
Q ss_pred CCEEEEECCCCC-CHHHHHHHHHCCCCEE
Q ss_conf 868999648876-2345555541798279
Q gi|254780901|r 150 AQLIITVDCGST-SYDALQYATNQGIDVI 177 (600)
Q Consensus 150 ~~LiItvD~Gi~-~~e~i~~a~~~GidvI 177 (600)
++++|. -.++. ++.|+.+|+++|+.||
T Consensus 68 ~d~vV~-S~AI~~~npel~~A~~~gipii 95 (96)
T d1p3da1 68 ASVVVV-SSAIKDDNPELVTSKQKRIPVI 95 (96)
T ss_dssp CSEEEE-CTTSCTTCHHHHHHHHTTCCEE
T ss_pred CCEEEE-CCCCCCCCHHHHHHHHCCCCEE
T ss_conf 989998-8872998999999998599888
No 85
>d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]}
Probab=44.78 E-value=7.2 Score=15.36 Aligned_cols=43 Identities=26% Similarity=0.295 Sum_probs=31.3
Q ss_pred EEEECCCCCCHHHHHHH-HHCCCCEEEECCCCCCCCCCCCEEEECCC
Q ss_conf 99964887623455555-41798279961544765556725652378
Q gi|254780901|r 153 IITVDCGSTSYDALQYA-TNQGIDVIVIDHHQVKSEEIPAYALVNPN 198 (600)
Q Consensus 153 iItvD~Gi~~~e~i~~a-~~~GidvIVtDHH~~~~~~p~a~aivNP~ 198 (600)
|.-+|.|+.+..-+.++ +++|+++.|+.+ ++++-.++.+|-|-
T Consensus 3 i~IiD~G~gN~~si~~~l~~lg~~~~i~~~---~~~i~~~d~lIlpG 46 (195)
T d1ka9h_ 3 ALLIDYGSGNLRSAAKALEAAGFSVAVAQD---PKAHEEADLLVLPG 46 (195)
T ss_dssp EEEECSSCSCHHHHHHHHHHTTCEEEEESS---TTSCSSCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHCCCEEEEECC---HHHHHHHHHHHCCC
T ss_conf 999907974999999999987981999889---99999876541378
No 86
>d1qapa1 c.1.17.1 (A:130-296) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=44.26 E-value=2.4 Score=19.05 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=14.0
Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECC
Q ss_conf 234555554179827996154476555672565237
Q gi|254780901|r 162 SYDALQYATNQGIDVIVIDHHQVKSEEIPAYALVNP 197 (600)
Q Consensus 162 ~~e~i~~a~~~GidvIVtDHH~~~~~~p~a~aivNP 197 (600)
+.+++..+.+.|.|+|..|.=.| ++.-.++..+||
T Consensus 88 ~~~~~~~a~~~g~diImLDN~~p-e~~~~av~~i~~ 122 (167)
T d1qapa1 88 NLDELDDALKAGADIIMLDNFNT-DQMREAVKRVNG 122 (167)
T ss_dssp SHHHHHHHHHTTCSEEEESSCCH-HHHHHHHHTTCT
T ss_pred CHHHHHHHHHCCCCEEEECCCCH-HHHHHHHHHCCC
T ss_conf 67888988745885999658888-999999986079
No 87
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=43.99 E-value=7.4 Score=15.27 Aligned_cols=31 Identities=26% Similarity=0.399 Sum_probs=16.9
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf 8689996488762345555541798279961
Q gi|254780901|r 150 AQLIITVDCGSTSYDALQYATNQGIDVIVID 180 (600)
Q Consensus 150 ~~LiItvD~Gi~~~e~i~~a~~~GidvIVtD 180 (600)
..+++.|+.|..+..+...++++|.+|.+.|
T Consensus 81 ~~ivl~C~~G~rS~~aa~~L~~~G~~v~~l~ 111 (130)
T d1yt8a4 81 ARLVLVDDDGVRANMSASWLAQMGWQVAVLD 111 (130)
T ss_dssp CEEEEECSSSSHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCCCCHHHHHHHHHHCCCCEEEEC
T ss_conf 4277665888628999999997078769975
No 88
>d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=43.41 E-value=7.5 Score=15.21 Aligned_cols=73 Identities=5% Similarity=-0.028 Sum_probs=44.6
Q ss_pred HHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCC
Q ss_conf 9999769947998078743366889789887420268689996488762345555541798279961544765556
Q gi|254780901|r 114 RFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQVKSEEI 189 (600)
Q Consensus 114 ~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~~~~~~p 189 (600)
+.++..|.++..+..+.-.+ ...+.++.+...+++-+|.+.....+......+...++-|++.|...++...+
T Consensus 24 ~~~~~~gy~~~~~~~~~d~~---~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~ 96 (282)
T d1dbqa_ 24 KNCFQKGYTLILGNAWNNLE---KQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFT 96 (282)
T ss_dssp HHHHHHTCEEEEEECTTCHH---HHHHHHHHHHHTTCSEEEEECSCCCHHHHHHHHHTTTSCEEEEECSSCCSSSC
T ss_pred HHHHHCCCEEEEEECCCCHH---HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 99998699999996899989---99999999996699878631122431356667764379726998313665345
No 89
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=43.39 E-value=7.5 Score=15.21 Aligned_cols=77 Identities=14% Similarity=0.188 Sum_probs=39.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCC---CCCHHHHHHHH
Q ss_conf 799994078861528999999999769947998078743366889789887420268689996488---76234555554
Q gi|254780901|r 94 KIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCG---STSYDALQYAT 170 (600)
Q Consensus 94 kI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~G---i~~~e~i~~a~ 170 (600)
||+|.= |--+...++.+.|+..|.+|... .. ..++++.+.+..++++|+ |.. .+..+-+...+
T Consensus 3 kILiVD----D~~~~~~~l~~~L~~~g~~v~~a-----~~----~~eal~~~~~~~~dlvl~-D~~mP~~~G~el~~~ir 68 (121)
T d1ys7a2 3 RVLVVD----DDSDVLASLERGLRLSGFEVATA-----VD----GAEALRSATENRPDAIVL-DINMPVLDGVSVVTALR 68 (121)
T ss_dssp EEEEEC----SCHHHHHHHHHHHHHTTCEEEEE-----SS----HHHHHHHHHHSCCSEEEE-ESSCSSSCHHHHHHHHH
T ss_pred EEEEEE----CCHHHHHHHHHHHHHCCCEEEEE-----CC----HHHHHHHHHHCCCCEEEE-EEECCCCCCHHHHHHHH
T ss_conf 899998----99999999999999879999998-----78----899999998279878997-76036752078999999
Q ss_pred HCC--CCEEE-ECCCCC
Q ss_conf 179--82799-615447
Q gi|254780901|r 171 NQG--IDVIV-IDHHQV 184 (600)
Q Consensus 171 ~~G--idvIV-tDHH~~ 184 (600)
+.+ +.+|+ |.|...
T Consensus 69 ~~~~~~piI~lt~~~~~ 85 (121)
T d1ys7a2 69 AMDNDVPVCVLSARSSV 85 (121)
T ss_dssp HTTCCCCEEEEECCCTT
T ss_pred HCCCCCEEEEEEEECCH
T ss_conf 64999879999821899
No 90
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]}
Probab=42.91 E-value=7.6 Score=15.15 Aligned_cols=95 Identities=19% Similarity=0.221 Sum_probs=49.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEE-EEC-CCCCHHHHHHHHHHHHHHCC-C--CEEEEECCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 14879999999999977997999-940-78861528999999999769-9--4799807874336688978988742026
Q gi|254780901|r 75 LTDCDKAARRIVQAIYNSEKIMI-FGD-YDVDGAASVALMMRFLSHCS-V--NANMYIPDRIVDGYGPNPSLMEKFINEG 149 (600)
Q Consensus 75 l~dm~~A~~ri~~ai~~~ekI~I-~gD-yD~DGitstail~~~L~~~g-~--~v~~~IP~R~~eGYGl~~~~i~~~~~~g 149 (600)
+.++++.++++.++- =.-|-+ .-| .=|..+|-..-..+.++... . +++..+-+ ....++++.+.|
T Consensus 13 ~~~l~~~i~~~~~~g--~d~iHiDimDg~Fvpn~s~g~~~i~~i~~~t~~~~dvHLMv~~--------P~~~i~~~~~~g 82 (217)
T d2flia1 13 YANFASELARIEETD--AEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVD--------PERYVEAFAQAG 82 (217)
T ss_dssp GGGHHHHHHHHHHTT--CCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSS--------GGGGHHHHHHHT
T ss_pred HHHHHHHHHHHHHCC--CCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECC--------HHHHHHHHHHCC
T ss_conf 899999999999769--9989997515948775562889999987467872576777359--------889899999709
Q ss_pred CCEEEE-ECCCCCCHHHHHHHHHCCCCEEEE
Q ss_conf 868999-648876234555554179827996
Q gi|254780901|r 150 AQLIIT-VDCGSTSYDALQYATNQGIDVIVI 179 (600)
Q Consensus 150 ~~LiIt-vD~Gi~~~e~i~~a~~~GidvIVt 179 (600)
+++|+. +.+...-.+.+.++++.|+.+-+.
T Consensus 83 a~~i~~H~E~~~~~~~~i~~i~~~g~~~Gia 113 (217)
T d2flia1 83 ADIMTIHTESTRHIHGALQKIKAAGMKAGVV 113 (217)
T ss_dssp CSEEEEEGGGCSCHHHHHHHHHHTTSEEEEE
T ss_pred CCEEEECCCCCCCHHHHHHHHHHCCCEEEEE
T ss_conf 9679950434457788999998659738999
No 91
>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=42.86 E-value=7.7 Score=15.15 Aligned_cols=10 Identities=20% Similarity=0.471 Sum_probs=4.6
Q ss_pred HCCCCEEEEE
Q ss_conf 7799799994
Q gi|254780901|r 90 YNSEKIMIFG 99 (600)
Q Consensus 90 ~~~ekI~I~g 99 (600)
+.+++++|+|
T Consensus 24 ~~g~~VlI~g 33 (183)
T d1pqwa_ 24 SPGERVLIHS 33 (183)
T ss_dssp CTTCEEEETT
T ss_pred CCCCEEEEEC
T ss_conf 9989999988
No 92
>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=42.75 E-value=7.7 Score=15.14 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=16.8
Q ss_pred HHHHHHHCCCCEEEE-ECCCCC-CHHHHHHHHHCCCCEE
Q ss_conf 988742026868999-648876-2345555541798279
Q gi|254780901|r 141 LMEKFINEGAQLIIT-VDCGST-SYDALQYATNQGIDVI 177 (600)
Q Consensus 141 ~i~~~~~~g~~LiIt-vD~Gi~-~~e~i~~a~~~GidvI 177 (600)
.++.+.+.|++.|+. +.+-.. ..+-+.++++.|+.+-
T Consensus 74 ~i~~~~~~g~~~I~~H~E~~~~~~~~~i~~i~~~g~~~G 112 (220)
T d1h1ya_ 74 YVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPG 112 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 557765302341564001010128899999997497723
No 93
>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=42.26 E-value=7.8 Score=15.08 Aligned_cols=117 Identities=15% Similarity=0.113 Sum_probs=66.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEE
Q ss_conf 87999999999997799799994078861528999999999769947998078743366889789887420268689996
Q gi|254780901|r 77 DCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITV 156 (600)
Q Consensus 77 dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItv 156 (600)
+|. |+.-+...++.+.+|++..+ +=|-| -.++...+..+|.++.++-+. +.+.++.+...++++|.+=
T Consensus 73 GMa-Aisall~ll~~Gd~vv~~~~--~Yg~t-~~l~~~~~~~~gi~~~~~d~~--------~~~~~~~ai~~~t~li~~E 140 (380)
T d1ibja_ 73 GMA-ALSAVTHLIKNGEEIVAGDD--VYGGS-DRLLSQVVPRSGVVVKRVNTT--------KLDEVAAAIGPQTKLVWLE 140 (380)
T ss_dssp HHH-HHHHHHTTSCTTCEEEEESS--CCHHH-HHHHHHTSGGGTCEEEEECTT--------SHHHHHHHCCSSEEEEEEC
T ss_pred HHH-HHHHHHHHHCCCCEEEEEEC--CCCCC-CCHHHHHHCCCCCCCCCCCCC--------HHHHHHHHHCCCCCEEEEC
T ss_conf 999-99999986279987999740--33554-012222110454212235751--------6788777750676189961
Q ss_pred -----CCCCCCHHHHH-HHHHCCCCEEEECCCCCC-CCCC--C-CEEEECCCCCCCCCCCCCHHHH
Q ss_conf -----48876234555-554179827996154476-5556--7-2565237888864334430478
Q gi|254780901|r 157 -----DCGSTSYDALQ-YATNQGIDVIVIDHHQVK-SEEI--P-AYALVNPNRLDDLSGQGHLCAA 212 (600)
Q Consensus 157 -----D~Gi~~~e~i~-~a~~~GidvIVtDHH~~~-~~~p--~-a~aivNP~~~~~~~p~~~l~ga 212 (600)
-.-+.+.+++. .|++.|+-+||=+-...| ...| . |+.+|+- --|+++|-
T Consensus 141 tpsNP~l~v~Di~~i~~iA~~~g~~~vVDnT~atP~~~~Pl~~GaDiVvhS-------~TKyi~Gh 199 (380)
T d1ibja_ 141 SPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHS-------ATKFIAGH 199 (380)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGTTCSEEEEE-------TTTTTTCS
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEC-------CCCEECCC
T ss_conf 424432234458999999987598089624300430025545589899960-------65202566
No 94
>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}
Probab=42.01 E-value=7.9 Score=15.05 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=11.7
Q ss_pred CCHHHHHHHHHCCCCEEEEECCCCCCHHHHH
Q ss_conf 8978988742026868999648876234555
Q gi|254780901|r 137 PNPSLMEKFINEGAQLIITVDCGSTSYDALQ 167 (600)
Q Consensus 137 l~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~ 167 (600)
+|.+.++++...++++|+--=||-...++.+
T Consensus 132 I~~~~a~~l~a~~ck~I~EgAN~p~t~ea~~ 162 (255)
T d1bgva1 132 VDLEQAKKIVANNVKYYIEVANMPTTNEALR 162 (255)
T ss_dssp BCHHHHHHHHHTTCCEEECCSSSCBCHHHHH
T ss_pred CCHHHHHHHHHCCCEEEECCCCCCCCHHHHH
T ss_conf 5588887665247339954777876557899
No 95
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=42.00 E-value=7.9 Score=15.05 Aligned_cols=25 Identities=16% Similarity=0.308 Sum_probs=11.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 3475026205785812222227899884
Q gi|254780901|r 366 QQASVIVVEGDRWHPGIVGLLAARLKEK 393 (600)
Q Consensus 366 ~~~~~ivv~~~~wh~GViGIVAsrL~e~ 393 (600)
.+.++||+.. +.. ..-.++..|.+.
T Consensus 160 ~~~k~iiF~~--~~~-~~~~~~~~L~~~ 184 (286)
T d1wp9a2 160 QNSKIIVFTN--YRE-TAKKIVNELVKD 184 (286)
T ss_dssp TTCCEEEECS--CHH-HHHHHHHHHHHT
T ss_pred CCCCEEEEEC--CHH-HHHHHHHHHHHC
T ss_conf 9984899967--188-679999999976
No 96
>d3clsc1 c.26.2.3 (C:1-262) Small, beta subunit of electron transfer flavoprotein ETFP {Methylophilus methylotrophus [TaxId: 17]}
Probab=41.91 E-value=7.9 Score=15.04 Aligned_cols=99 Identities=9% Similarity=0.118 Sum_probs=56.7
Q ss_pred CHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHH----HHH-H
Q ss_conf 95561487999999999997799799994078861528999999999769947998078743366889789----887-4
Q gi|254780901|r 71 DPLILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSL----MEK-F 145 (600)
Q Consensus 71 dP~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~----i~~-~ 145 (600)
|||...-+|.|.. |.++..-.-.+.+++ +.+-.+...|.++| .+|++--|+|-++-..| ...-+ +.. +
T Consensus 36 Np~D~~AlE~Al~-lke~~gg~~~Vtvvt---~Gp~~a~~~Lr~al-AmGaD~avli~d~~~~~--~d~~~tA~~lA~~i 108 (262)
T d3clsc1 36 NEWDDFSLEEAMK-IKESSDTDVEVVVVS---VGPDRVDESLRKCL-AKGADRAVRVWDDAAEG--SDAIVVGRILTEVI 108 (262)
T ss_dssp CHHHHHHHHHHHH-HHHHCSSCCEEEEEE---ESCTTHHHHHHHHH-HTTCSEEEEECCGGGTT--CCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHH-HHHCCCCCEEEEEEE---CCCHHHHHHHHHHH-HCCCCEEEEEECCCCCC--CHHHHHHHHHHHHH
T ss_conf 8625999999999-985479835999996---16636789999998-60797369996045566--12888999999986
Q ss_pred HHCCCCEEEEECCCCCCH----HHHHHHHHCCCCEE
Q ss_conf 202686899964887623----45555541798279
Q gi|254780901|r 146 INEGAQLIITVDCGSTSY----DALQYATNQGIDVI 177 (600)
Q Consensus 146 ~~~g~~LiItvD~Gi~~~----e~i~~a~~~GidvI 177 (600)
...+++||++= ..+++. -....|.-+|+-.+
T Consensus 109 ~~~~~DLIl~G-~~s~D~~~gqvg~~lAe~Lg~P~v 143 (262)
T d3clsc1 109 KKEAPDMVFAG-VQSSDQAYASTGISVASYLNWPHA 143 (262)
T ss_dssp HHHCCSEEEEE-SCCTTTCCCCHHHHHHHHHTCCEE
T ss_pred HCCCCCEEEEE-EECCCCCCCHHHHHHHHHCCCCEE
T ss_conf 23488689996-321477756377999987388647
No 97
>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}
Probab=41.58 E-value=8 Score=15.01 Aligned_cols=101 Identities=10% Similarity=0.169 Sum_probs=57.9
Q ss_pred CCCHHHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 14879999999999977-99799994078861528999999999769947998078743366889789887420268689
Q gi|254780901|r 75 LTDCDKAARRIVQAIYN-SEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLI 153 (600)
Q Consensus 75 l~dm~~A~~ri~~ai~~-~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~Li 153 (600)
-.+...|...+.+++-+ +..|++..- -=.+ ....++..|.++..+ |-...+||++..+.+++....+++++
T Consensus 97 t~G~~~al~~~~~~l~~~gd~vl~~~P-~y~~------~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~~~~~~~i 168 (382)
T d1b5pa_ 97 TVGGSQALFNLFQAILDPGDEVIVLSP-YWVS------YPEMVRFAGGVVVEV-ETLPEEGFVPDPERVRRAITPRTKAL 168 (382)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEES-CCTH------HHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHTTCCTTEEEE
T ss_pred CCCHHHHHHHHHHHHCCCCCEEEECCC-CCHH------HHHHHHHHCCEEEEE-ECCCCCCCCCCHHHHHHHCCCCCEEE
T ss_conf 677899999999996799798998799-8477------999999845847998-55410145899999997378897699
Q ss_pred EEEC----CCCC-CHHH----HHHHHHCCCCEEEECCCC
Q ss_conf 9964----8876-2345----555541798279961544
Q gi|254780901|r 154 ITVD----CGST-SYDA----LQYATNQGIDVIVIDHHQ 183 (600)
Q Consensus 154 ItvD----~Gi~-~~e~----i~~a~~~GidvIVtDHH~ 183 (600)
+.+. +|+. +.++ ++.|++.++-+|.=|-|.
T Consensus 169 ~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~ 207 (382)
T d1b5pa_ 169 VVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYE 207 (382)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred EECCCCCCCCHHCCHHHHHHHHHHHHHCCEEEEEECCCC
T ss_conf 989997976600799999999999998590899976641
No 98
>d1vkfa_ c.1.29.1 (A:) Glycerol uptake operon antiterminator-related protein TM1436 {Thermotoga maritima [TaxId: 2336]}
Probab=41.03 E-value=8.1 Score=14.95 Aligned_cols=73 Identities=19% Similarity=0.273 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEE----EECC
Q ss_conf 528999999999769947998078743366889789887420268689996488762345555541798279----9615
Q gi|254780901|r 106 AASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVI----VIDH 181 (600)
Q Consensus 106 itstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvI----VtDH 181 (600)
++.-.=+.+.++..|..+..|+- +-+|-+-.+.+++.+++-+++=||| |-..-+.+|+++|+-+| ++|-
T Consensus 30 I~~l~~~v~~~k~~gK~v~VHiD--Li~GL~~d~~av~flk~~~~dGIIS-----Tk~~~i~~Ak~~Gl~tIqR~FliDS 102 (172)
T d1vkfa_ 30 ILNLKFHLKILKDRGKTVFVDMD--FVNGLGEGEEAILFVKKAGADGIIT-----IKPKNYVVAKKNGIPAVLRFFALDS 102 (172)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEGG--GEETCCSSHHHHHHHHHHTCSEEEE-----SCHHHHHHHHHTTCCEEEEEECCSH
T ss_pred HHHHHHHHHHHHHCCCEEEEEEE--ECCCCCCCHHHHHHHHHCCCCEEEE-----CCHHHHHHHHHCCCEEEEEEEEEEH
T ss_conf 88899999999986998999864--0477788778999999749999997-----8799999999869859998875636
Q ss_pred CCCC
Q ss_conf 4476
Q gi|254780901|r 182 HQVK 185 (600)
Q Consensus 182 H~~~ 185 (600)
+...
T Consensus 103 ~al~ 106 (172)
T d1vkfa_ 103 KAVE 106 (172)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 7899
No 99
>d2g2ca1 c.57.1.1 (A:1-163) Putative molybdenum cofactor biosynthesis protein DIP0503 {Corynebacterium diphtheriae [TaxId: 1717]}
Probab=40.95 E-value=7.1 Score=15.40 Aligned_cols=51 Identities=20% Similarity=0.158 Sum_probs=31.3
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEE--ECCCCCCCCCCCHHHHHHHHHCCCCEEEEE
Q ss_conf 8861528999999999769947998--078743366889789887420268689996
Q gi|254780901|r 102 DVDGAASVALMMRFLSHCSVNANMY--IPDRIVDGYGPNPSLMEKFINEGAQLIITV 156 (600)
Q Consensus 102 D~DGitstail~~~L~~~g~~v~~~--IP~R~~eGYGl~~~~i~~~~~~g~~LiItv 156 (600)
|.-|-.-...|.+.|+.+|.++.++ +|+...+ -.+.+.++.++++++|||.
T Consensus 21 D~~g~~~~~~L~~~l~~~G~~v~~~~iv~D~~~~----i~~~~~~a~~~~~DlVitt 73 (163)
T d2g2ca1 21 NKALPLLQRLMSDELQDYSYELISEVVVPEGYDT----VVEAIATALKQGARFIITA 73 (163)
T ss_dssp CCHHHHHHHHHCC----CEEEEEEEEEECSSHHH----HHHHHHHHHHTTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCEEEEEEEEECCHHHH----HHHHHHHHHCCCCCEEEEC
T ss_conf 6865899999999987499699999861413788----9999876550377889964
No 100
>d1jf8a_ c.44.1.1 (A:) Arsenate reductase ArsC {Staphylococcus aureus [TaxId: 1280]}
Probab=40.86 E-value=6.7 Score=15.60 Aligned_cols=18 Identities=22% Similarity=0.335 Sum_probs=8.8
Q ss_pred CCCCCCHHHHHHHHHCCC
Q ss_conf 366889789887420268
Q gi|254780901|r 133 DGYGPNPSLMEKFINEGA 150 (600)
Q Consensus 133 eGYGl~~~~i~~~~~~g~ 150 (600)
++.++++.+++-+.+.|.
T Consensus 39 ~~~~v~p~ai~~l~e~Gi 56 (130)
T d1jf8a_ 39 ETHGVNPKAIEAMKEVDI 56 (130)
T ss_dssp SCCCCCHHHHHHHHHTTC
T ss_pred CCCCCCHHHHHHHHCCCC
T ss_conf 234540255677530132
No 101
>d1y5ea1 c.57.1.1 (A:12-166) MoaB {Bacillus cereus [TaxId: 1396]}
Probab=40.73 E-value=8.2 Score=14.91 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=36.5
Q ss_pred EEEEECCCCCHH---HHHHHHHHHHHHCCCCEEEE--ECCCCCCCCCCCHHHHHHHHH-CCCCEEEEE
Q ss_conf 999940788615---28999999999769947998--078743366889789887420-268689996
Q gi|254780901|r 95 IMIFGDYDVDGA---ASVALMMRFLSHCSVNANMY--IPDRIVDGYGPNPSLMEKFIN-EGAQLIITV 156 (600)
Q Consensus 95 I~I~gDyD~DGi---tstail~~~L~~~g~~v~~~--IP~R~~eGYGl~~~~i~~~~~-~g~~LiItv 156 (600)
|..++| --|. +++..|...|+..|.++..+ +|+.... -.+.+.++.+ .++++|||.
T Consensus 7 vitvsd--~~~~~~D~ngp~L~~~l~~~G~~v~~~~iv~D~~~~----i~~~l~~~~~~~~~DlIvTt 68 (155)
T d1y5ea1 7 IVTISD--TRTEETDKSGQLLHELLKEAGHKVTSYEIVKDDKES----IQQAVLAGYHKEDVDVVLTN 68 (155)
T ss_dssp EEEECS--SCCTTTCHHHHHHHHHHHHHTCEEEEEEEECSSHHH----HHHHHHHHHTCTTCSEEEEE
T ss_pred EEEEEC--CCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCHHHH----HHHHHHHHHHCCCCCEEEEE
T ss_conf 999818--888776743999999998669888886664463999----99999999856688789986
No 102
>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}
Probab=40.71 E-value=8.2 Score=14.91 Aligned_cols=51 Identities=14% Similarity=0.148 Sum_probs=30.9
Q ss_pred HHHCCCHHHHHHHHHHH-HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 55614879999999999-9779979999407886152899999999976994799
Q gi|254780901|r 72 PLILTDCDKAARRIVQA-IYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANM 125 (600)
Q Consensus 72 P~~l~dm~~A~~ri~~a-i~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~ 125 (600)
|..++..+...+.+.+. |.++.+|.+|++ .|..+++.++-.|+.+|.+-.+
T Consensus 57 ~~~l~~~~~l~~~~~~~Gi~~~~~iVvy~~---~~~~~a~~~~~~l~~~G~~~V~ 108 (143)
T d1uara1 57 VRDFISEEEFAKLMERLGISNDTTVVLYGD---KNNWWAAYAFWFFKYNGHKDVR 108 (143)
T ss_dssp SSSBCCHHHHHHHHHHTTCCTTCEEEEECH---HHHHHHHHHHHHHHHTTCSCEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCEEEEECC---CCCCCCHHHHHHHHHHCCCEEE
T ss_conf 310012578887765421478735998547---8764104678999981886699
No 103
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=40.68 E-value=7.9 Score=15.03 Aligned_cols=53 Identities=23% Similarity=0.295 Sum_probs=24.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCC
Q ss_conf 9799994078861528999999999769947998078743366889789887420268689996488
Q gi|254780901|r 93 EKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCG 159 (600)
Q Consensus 93 ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~G 159 (600)
+||+|.= |--+...++...|+..|.+|... .. ..++++.+.+..++|+| +|-.
T Consensus 3 krILiVD----Dd~~~~~~l~~~L~~~g~~v~~a-----~~----~~~al~~l~~~~~dlil-lD~~ 55 (121)
T d1mvoa_ 3 KKILVVD----DEESIVTLLQYNLERSGYDVITA-----SD----GEEALKKAETEKPDLIV-LDVM 55 (121)
T ss_dssp CEEEEEC----SCHHHHHHHHHHHHHTTCEEEEE-----SS----HHHHHHHHHHHCCSEEE-EESS
T ss_pred CCEEEEE----CCHHHHHHHHHHHHHCCCEEEEE-----CC----HHHHHHHHHCCCCCEEE-ECCC
T ss_conf 8799998----99999999999999889999998-----78----89999987435665897-3145
No 104
>d1u9la_ a.60.4.2 (A:) Transcription elongation protein NusA {Escherichia coli [TaxId: 562]}
Probab=40.56 E-value=8.2 Score=14.89 Aligned_cols=55 Identities=20% Similarity=0.161 Sum_probs=34.2
Q ss_pred HHHHHHHHCCCHHHHHHHHHCCCC-HHHHHHHCCCCHHHCCCCHHHCCCHHHHHHHHHHHH
Q ss_conf 999998819999999999967889-789886619667771899556148799999999999
Q gi|254780901|r 30 ALAITQKHAIPDIVARVLVNRNVS-IDYAKDFLNPSIRLLMPDPLILTDCDKAARRIVQAI 89 (600)
Q Consensus 30 ~~~l~~~~~~~~~~a~iL~~Rgi~-~~~~~~fL~p~l~~l~~dP~~l~dm~~A~~ri~~ai 89 (600)
...+.+.+++++.+|++|+.-||+ .+++- +. ...++. .-..| |-+-|-+...+|.
T Consensus 5 ~~~F~~~LdVDe~lA~lLv~EGF~siEeIA-yv--~~~eL~-~Iegf-Dee~a~eL~~RA~ 60 (68)
T d1u9la_ 5 IDTFTKYLDIDEDFATVLVEEGFSTLEELA-YV--PMKELL-EIEGL-DEPTVEALRERAK 60 (68)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTTCCCHHHHH-HS--CHHHHT-TSTTC-CHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHCCCCHHHHH-CC--CHHHHH-HHCCC-CHHHHHHHHHHHH
T ss_conf 999999848739999999984658699986-59--999997-70054-7999999999999
No 105
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}
Probab=40.28 E-value=8.3 Score=14.86 Aligned_cols=76 Identities=11% Similarity=0.247 Sum_probs=49.4
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH-HHC
Q ss_conf 7999940788615289999999997699479980787433668897898874202686899964887623455555-417
Q gi|254780901|r 94 KIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYA-TNQ 172 (600)
Q Consensus 94 kI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a-~~~ 172 (600)
||+|.| +.|--+..+....++. |.+|... +|+..++.-.....+.....++.+ +.+|. ++.+.+..+ ++.
T Consensus 2 KiLItG---~tGfIG~~l~~~L~~~-g~~V~~~--d~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl--~d~~~l~~~~~~~ 72 (338)
T d1udca_ 2 RVLVTG---GSGYIGSHTCVQLLQN-GHDVIIL--DNLCNSKRSVLPVIERLGGKHPTF-VEGDI--RNEALMTEILHDH 72 (338)
T ss_dssp EEEEET---TTSHHHHHHHHHHHHT-TCEEEEE--ECCSSCCTTHHHHHHHHHTSCCEE-EECCT--TCHHHHHHHHHHT
T ss_pred EEEEEC---CCCHHHHHHHHHHHHC-CCEEEEE--ECCCCCCHHHHHHHHHHCCCCCEE-EEEEC--CCHHHHHHHHHCC
T ss_conf 799989---8878999999999978-4979999--788875265677788624788779-99016--8989999987416
Q ss_pred CCCEEE
Q ss_conf 982799
Q gi|254780901|r 173 GIDVIV 178 (600)
Q Consensus 173 GidvIV 178 (600)
|+|+||
T Consensus 73 ~~d~Vi 78 (338)
T d1udca_ 73 AIDTVI 78 (338)
T ss_dssp TCSEEE
T ss_pred CCCEEE
T ss_conf 998999
No 106
>d2aizp1 d.79.7.1 (P:1-134) Peptidoglycan-associated lipoprotein, PAL, periplasmic domain {Haemophilus influenzae [TaxId: 727]}
Probab=40.07 E-value=8.4 Score=14.84 Aligned_cols=48 Identities=13% Similarity=0.137 Sum_probs=27.5
Q ss_pred HCCCCHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH
Q ss_conf 6196677718995561487999999999997799799994078861528999
Q gi|254780901|r 60 FLNPSIRLLMPDPLILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVAL 111 (600)
Q Consensus 60 fL~p~l~~l~~dP~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstai 111 (600)
|+.++-..| +|.....+++.++.|.+ ..+.+|.|.|+.|..|-...-.
T Consensus 33 ~F~~~s~~L--~~~~~~~L~~la~~l~~--~~~~~i~I~GhtD~~g~~~~N~ 80 (134)
T d2aizp1 33 YFGFDKYDI--TGEYVQILDAHAAYLNA--TPAAKVLVEGNTDERGTPEYNI 80 (134)
T ss_dssp ECCTTCCCC--CHHHHHHHHHHHHHHHH--STTCCEEEEEECCSSSCHHHHH
T ss_pred ECCCCCCCC--CHHHHHHHHHHHHHHHH--CCCCEEEEEECCCCCCCCCCCH
T ss_conf 837998124--98899999999999986--9996899960434332211101
No 107
>d1zh2a1 c.23.1.1 (A:2-120) Transcriptional regulatory protein KdpE, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=40.04 E-value=6.5 Score=15.68 Aligned_cols=37 Identities=16% Similarity=0.271 Sum_probs=19.5
Q ss_pred HCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 02686899964887623455555417982799615447655
Q gi|254780901|r 147 NEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQVKSE 187 (600)
Q Consensus 147 ~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~~~~~ 187 (600)
..|++ +.++.+| .++++.+++.-.|+|++|.+.|...
T Consensus 22 ~~g~~-v~~a~~~---~eal~~l~~~~~dliilD~~mP~~~ 58 (119)
T d1zh2a1 22 GDGMR-VFEAETL---QRGLLEAATRKPDLIILDLGLPDGD 58 (119)
T ss_dssp TTTCE-EEEESSH---HHHHHHHHHHCCSEEEEESEETTEE
T ss_pred HCCCE-EEEECCH---HHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 87999-9996888---9999999825997899426667998
No 108
>d1v5xa_ c.1.2.4 (A:) N-(5'phosphoribosyl)antranilate isomerase, PRAI {Thermus thermophilus [TaxId: 274]}
Probab=40.03 E-value=6.1 Score=15.91 Aligned_cols=23 Identities=22% Similarity=0.257 Sum_probs=18.5
Q ss_pred CCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf 88762345555541798279961
Q gi|254780901|r 158 CGSTSYDALQYATNQGIDVIVID 180 (600)
Q Consensus 158 ~Gi~~~e~i~~a~~~GidvIVtD 180 (600)
||+++.+.+.+|.++|.|.+=.=
T Consensus 6 CGit~~ed~~~~~~~gad~iGfi 28 (200)
T d1v5xa_ 6 CGITRLEDALLAEALGAFALGFV 28 (200)
T ss_dssp CCCCCHHHHHHHHHHTCSEEEEE
T ss_pred CCCCCHHHHHHHHHCCCCEEEEE
T ss_conf 58995999999984799989997
No 109
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]}
Probab=40.02 E-value=8.4 Score=14.83 Aligned_cols=57 Identities=23% Similarity=0.358 Sum_probs=33.0
Q ss_pred HHHHHHHHCCCCEEEEECC---CCC--CCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 9999999769947998078---743--36688978988742026868999648876234555554179827996154476
Q gi|254780901|r 111 LMMRFLSHCSVNANMYIPD---RIV--DGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQVK 185 (600)
Q Consensus 111 il~~~L~~~g~~v~~~IP~---R~~--eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~~~ 185 (600)
=+.+.++..|.+.. .||= ++. +.|-++...++++ .+-|++|.+.||.|||.=||.+.
T Consensus 65 ~~i~~ik~~Gfn~v-RiPv~w~~~~~~~~~~i~~~~l~~v-----------------~~vV~~a~~~Gl~VIldlHh~~~ 126 (380)
T d1edga_ 65 QMIDAIKQKGFNTV-RIPVSWHPHVSGSDYKISDVWMNRV-----------------QEVVNYCIDNKMYVILNTHHDVD 126 (380)
T ss_dssp HHHHHHHHHTCCEE-EECCCCGGGEETTTTEECHHHHHHH-----------------HHHHHHHHTTTCEEEEECCSCBC
T ss_pred HHHHHHHHCCCCEE-EECCCHHHHCCCCCCCCCHHHHHHH-----------------HHHHHHHHHCCCEEEEECCCCCC
T ss_conf 99999998699879-9734078826899885298999999-----------------99999999769979984566788
No 110
>d1o1za_ c.1.18.3 (A:) Hypothetical protein TM1621 {Thermotoga maritima [TaxId: 2336]}
Probab=39.72 E-value=8.5 Score=14.80 Aligned_cols=29 Identities=17% Similarity=0.290 Sum_probs=22.1
Q ss_pred CCHHHHHHHHHCCCCEEEECCCCCCCCCC
Q ss_conf 62345555541798279961544765556
Q gi|254780901|r 161 TSYDALQYATNQGIDVIVIDHHQVKSEEI 189 (600)
Q Consensus 161 ~~~e~i~~a~~~GidvIVtDHH~~~~~~p 189 (600)
++.++.+.|.+.|.|.|=+|=|...+..|
T Consensus 20 NT~~af~~a~~~g~~~iE~Dv~~T~Dg~~ 48 (226)
T d1o1za_ 20 NTLEAFMKAIEAGANGVELDVRLSKDGKV 48 (226)
T ss_dssp TSHHHHHHHHHTTCSEEEEEEEECTTSCE
T ss_pred CHHHHHHHHHHCCCCEEEEEEEECCCCCE
T ss_conf 12999999998598989988898059978
No 111
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]}
Probab=39.49 E-value=8.5 Score=14.77 Aligned_cols=67 Identities=15% Similarity=0.118 Sum_probs=33.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECC---CCCCCCCCCHHHHHHHHHCCCC--EEEEECCCCCCHHH----HHHHHHC
Q ss_conf 8861528999999999769947998078---7433668897898874202686--89996488762345----5555417
Q gi|254780901|r 102 DVDGAASVALMMRFLSHCSVNANMYIPD---RIVDGYGPNPSLMEKFINEGAQ--LIITVDCGSTSYDA----LQYATNQ 172 (600)
Q Consensus 102 D~DGitstail~~~L~~~g~~v~~~IP~---R~~eGYGl~~~~i~~~~~~g~~--LiItvD~Gi~~~e~----i~~a~~~ 172 (600)
|-.|+++- ...|+.+|.+..+.-|= ...+.++-. ...|.. -.-.+|.-....++ |+.|+++
T Consensus 41 ~~~g~~~k---LdyL~~LGv~~I~L~Pi~~~~~~~~~~~~-------~~~gY~~~d~~~id~~~Gt~~~~k~lv~~aH~~ 110 (381)
T d2aaaa2 41 SWQGIIDH---LDYIEGMGFTAIWISPITEQLPQDTADGE-------AYHGYWQQKIYDVNSNFGTADNLKSLSDALHAR 110 (381)
T ss_dssp CHHHHHHT---HHHHHTTTCCEEEECCCEEECCCCBTTBC-------STTSCSEEEEEEECTTTCCHHHHHHHHHHHHTT
T ss_pred CHHHHHHH---HHHHHHCCCCEEEECCCCCCCCCCCCCCC-------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 89999997---99999769998994987668765788998-------875566465433110249889999999988663
Q ss_pred CCCEEE
Q ss_conf 982799
Q gi|254780901|r 173 GIDVIV 178 (600)
Q Consensus 173 GidvIV 178 (600)
||.||+
T Consensus 111 Gi~Vil 116 (381)
T d2aaaa2 111 GMYLMV 116 (381)
T ss_dssp TCEEEE
T ss_pred HHCCCC
T ss_conf 111100
No 112
>d1jnra3 d.168.1.1 (A:257-401) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=39.07 E-value=3.1 Score=18.19 Aligned_cols=21 Identities=43% Similarity=0.738 Sum_probs=14.7
Q ss_pred EECCCCCCCCCCCHHHHHHHH
Q ss_conf 807874336688978988742
Q gi|254780901|r 126 YIPDRIVDGYGPNPSLMEKFI 146 (600)
Q Consensus 126 ~IP~R~~eGYGl~~~~i~~~~ 146 (600)
+||-||+||||..-...--++
T Consensus 5 Fvp~RfKD~ygPvGa~fl~~K 25 (145)
T d1jnra3 5 FIPFRFKDGYGPVGAWFLFFK 25 (145)
T ss_dssp BCCEEETTTCCCCHHHHHTSC
T ss_pred EEEEEECCCCCCCHHHHHHCC
T ss_conf 131312277475029898527
No 113
>d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}
Probab=39.06 E-value=8.7 Score=14.73 Aligned_cols=79 Identities=14% Similarity=0.286 Sum_probs=50.5
Q ss_pred CCCCEEEEECCCCC-HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 79979999407886-15289999999997699479980787433668897898874202686899964887623455555
Q gi|254780901|r 91 NSEKIMIFGDYDVD-GAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYA 169 (600)
Q Consensus 91 ~~ekI~I~gDyD~D-Gitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a 169 (600)
++-+|+++|| .- |=++-++ ...+..+|....+++|. ++|.......+.+...|.+..+|-|.- +++
T Consensus 3 ~gl~i~~vGD--~~nsrv~~Sl-i~~l~~~~~~~~~~~~P---~~~~~~~~~~~~~~~~~~~~~~~~d~~----~a~--- 69 (160)
T d1ekxa2 3 DNLHVAMVGD--LKYGRTVHSL-TQALAKFDGNRFYFIAP---DALAMPQYILDMLDEKGIAWSLHSSIE----EVM--- 69 (160)
T ss_dssp SSCEEEEESC--TTTCHHHHHH-HHHHTTSSSCEEEEECC---GGGCCCHHHHHHHHHTTCCEEECSCST----TTG---
T ss_pred CCCEEEEECC--CCCCHHHHHH-HHHHHHCCCCEEEEECC---CHHHHHHHHHHHHHHHCCCCCCCCCHH----HHH---
T ss_conf 9999999867--8866899999-99999829972886064---012146899999865204563116999----982---
Q ss_pred HHCCCCEEEECCCCC
Q ss_conf 417982799615447
Q gi|254780901|r 170 TNQGIDVIVIDHHQV 184 (600)
Q Consensus 170 ~~~GidvIVtDHH~~ 184 (600)
.+.|||.||-..-
T Consensus 70 --~~aDvvy~~~~~~ 82 (160)
T d1ekxa2 70 --AEVDILYMTRVQK 82 (160)
T ss_dssp --GGCSEEEECCCCG
T ss_pred --CCCCEEEEECCCC
T ss_conf --7685688623543
No 114
>d1piia1 c.1.2.4 (A:255-452) N-(5'phosphoribosyl)antranilate isomerase, PRAI {Escherichia coli [TaxId: 562]}
Probab=38.97 E-value=6.5 Score=15.70 Aligned_cols=20 Identities=25% Similarity=0.200 Sum_probs=16.0
Q ss_pred CCCCCHHHHHHHHHCCCCEE
Q ss_conf 88762345555541798279
Q gi|254780901|r 158 CGSTSYDALQYATNQGIDVI 177 (600)
Q Consensus 158 ~Gi~~~e~i~~a~~~GidvI 177 (600)
||+++.+.+++|.++|+|.+
T Consensus 6 CGIt~~~d~~~~~~~gaD~i 25 (198)
T d1piia1 6 CGLTRGQDAKAAYDAGAIYG 25 (198)
T ss_dssp CCCCSHHHHHHHHHHTCSEE
T ss_pred CCCCCHHHHHHHHHCCCCEE
T ss_conf 68896999999996799989
No 115
>d2c1ia1 c.6.2.3 (A:268-463) Peptidoglycan GlcNAc deacetylase C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=38.96 E-value=8.7 Score=14.72 Aligned_cols=46 Identities=22% Similarity=0.540 Sum_probs=30.5
Q ss_pred CCCCHHH--HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 7886152--8999999999769947998078743366889789887420268
Q gi|254780901|r 101 YDVDGAA--SVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGA 150 (600)
Q Consensus 101 yD~DGit--stail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~ 150 (600)
+| ||-+ .|.-+...|++.+...++++.-+.-+. +++.++++.+.|.
T Consensus 7 FD-Dgp~~~~~~~il~~L~~~~i~aTfFv~g~~~~~---~~~~~~~~~~~Gh 54 (196)
T d2c1ia1 7 FN-DGPNPATTPQVLETLAKYDIKATFFVLGKNVSG---NEDLVKRIKSEGH 54 (196)
T ss_dssp EE-SCCCTTTHHHHHHHHHHTTCCCEEEECGGGTTT---CHHHHHHHHHTTC
T ss_pred EE-CCCCCCCHHHHHHHHHHCCCCEEEEEECHHHHH---CCHHHHHHCCCCE
T ss_conf 82-799816399999999986997999997554453---8477886167874
No 116
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.53 E-value=8.8 Score=14.67 Aligned_cols=78 Identities=17% Similarity=0.273 Sum_probs=50.6
Q ss_pred HCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 77997999940788615289999999997699479980787433668897898874202686899964887623455555
Q gi|254780901|r 90 YNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYA 169 (600)
Q Consensus 90 ~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a 169 (600)
...+++.|| |.-...+--++..|+..|..+.++--+.-.+ --...++.+.+...+.+|+.|.
T Consensus 32 ~~~~k~iiF----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~r~~~~~~fk~g~~~iLv~Td~----------- 93 (168)
T d2j0sa2 32 LTITQAVIF----CNTKRKVDWLTEKMREANFTVSSMHGDMPQK---ERESIMKEFRSGASRVLISTDV----------- 93 (168)
T ss_dssp HTSSEEEEE----CSSHHHHHHHHHHHHHTTCCCEEECTTSCHH---HHHHHHHHHHHTSSCEEEECGG-----------
T ss_pred CCCCCEEEE----EEEHHHHHHHHHHHHHCCCCHHHHHHHHHHH---HHHHHHHHHHCCCCCEEECCCH-----------
T ss_conf 787763999----6058887888877663044313331122578---9999999986388407741441-----------
Q ss_pred HHCCCCEEEECCCCCCCCCCCCEEEECC
Q ss_conf 4179827996154476555672565237
Q gi|254780901|r 170 TNQGIDVIVIDHHQVKSEEIPAYALVNP 197 (600)
Q Consensus 170 ~~~GidvIVtDHH~~~~~~p~a~aivNP 197 (600)
.++|+|+ |.+..|||=
T Consensus 94 ~~rGiDi------------~~v~~VIn~ 109 (168)
T d2j0sa2 94 WARGLDV------------PQVSLIINY 109 (168)
T ss_dssp GSSSCCC------------TTEEEEEES
T ss_pred HCCCCCC------------CCCCEEEEE
T ss_conf 0056553------------576568993
No 117
>d1yioa2 c.23.1.1 (A:3-130) Response regulatory protein StyR, N-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=38.50 E-value=8.5 Score=14.79 Aligned_cols=23 Identities=13% Similarity=0.079 Sum_probs=10.7
Q ss_pred HHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 34555554179827996154476
Q gi|254780901|r 163 YDALQYATNQGIDVIVIDHHQVK 185 (600)
Q Consensus 163 ~e~i~~a~~~GidvIVtDHH~~~ 185 (600)
.++++.+++...|+||+|-+.|.
T Consensus 36 ~~al~~~~~~~~dliilD~~mp~ 58 (128)
T d1yioa2 36 STFLEHRRPEQHGCLVLDMRMPG 58 (128)
T ss_dssp HHHHHHCCTTSCEEEEEESCCSS
T ss_pred HHHHHHHHHCCCCEEEHHHHCCC
T ss_conf 99999987458887502343565
No 118
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=38.39 E-value=8.9 Score=14.65 Aligned_cols=44 Identities=18% Similarity=0.156 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCC
Q ss_conf 528999999999769947998078743366889789887420268689996488
Q gi|254780901|r 106 AASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCG 159 (600)
Q Consensus 106 itstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~G 159 (600)
.+....+..+|+..|.+|... .. ..++++.+.+..++||| +|..
T Consensus 11 ~~~~~~l~~~L~~~g~~v~~a-----~~----~~~al~~l~~~~~dlil-lD~~ 54 (122)
T d1kgsa2 11 RDLADLITEALKKEMFTVDVC-----YD----GEEGMYMALNEPFDVVI-LDIM 54 (122)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE-----SS----HHHHHHHHHHSCCSEEE-EESC
T ss_pred HHHHHHHHHHHHHCCCEEEEE-----CC----HHHHHHHHHHHCCCCCC-CCCC
T ss_conf 999999999999879999997-----56----69999999862765220-0135
No 119
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}
Probab=38.34 E-value=8.9 Score=14.65 Aligned_cols=74 Identities=16% Similarity=0.226 Sum_probs=38.9
Q ss_pred HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHH-HH
Q ss_conf 9779979999407886152899999999976994-799807874336688978988742026868999648876234-55
Q gi|254780901|r 89 IYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVN-ANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYD-AL 166 (600)
Q Consensus 89 i~~~ekI~I~gDyD~DGitstail~~~L~~~g~~-v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e-~i 166 (600)
++.+++|+|+| + |-.+ .+....++.+|+. |... + .+++..+.+.+-|.+.+|.... .+.. ..
T Consensus 26 ~~~G~~VlV~G---a-G~iG-~~~~~~ak~~Ga~~Vi~~--~-------~~~~~~~~a~~lGa~~vi~~~~--~~~~~~~ 89 (182)
T d1vj0a2 26 SFAGKTVVIQG---A-GPLG-LFGVVIARSLGAENVIVI--A-------GSPNRLKLAEEIGADLTLNRRE--TSVEERR 89 (182)
T ss_dssp CCBTCEEEEEC---C-SHHH-HHHHHHHHHTTBSEEEEE--E-------SCHHHHHHHHHTTCSEEEETTT--SCHHHHH
T ss_pred CCCCCEEEEEC---C-CCCC-HHHEECCCCCCCCCCCCC--C-------CCCCCCCCCCCCCCEEEEECCC--CCHHHHH
T ss_conf 99979999989---9-8652-222022333323221233--3-------3222121223444337874244--2147789
Q ss_pred HHH----HHCCCCEEE
Q ss_conf 555----417982799
Q gi|254780901|r 167 QYA----TNQGIDVIV 178 (600)
Q Consensus 167 ~~a----~~~GidvIV 178 (600)
+.. ...|.|+++
T Consensus 90 ~~i~~~~~~~g~Dvvi 105 (182)
T d1vj0a2 90 KAIMDITHGRGADFIL 105 (182)
T ss_dssp HHHHHHTTTSCEEEEE
T ss_pred HHHHHHHCCCCCEEEE
T ss_conf 9999861897733884
No 120
>d1g57a_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Escherichia coli [TaxId: 562]}
Probab=38.27 E-value=8.5 Score=14.78 Aligned_cols=70 Identities=14% Similarity=0.264 Sum_probs=37.2
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 99999999977997999940788615289999999997699479980787433668897898874202686899964887
Q gi|254780901|r 81 AARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGS 160 (600)
Q Consensus 81 A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi 160 (600)
-++...+++++++.|+|+-|+|-.+ +....+|-. -++++.|..+...+..||-.+ +
T Consensus 11 ~ie~ai~alk~G~~Viv~Dd~~RE~----------------EgDlv~~Ae-----~~t~e~i~fm~~~~~GliC~a-~-- 66 (209)
T d1g57a_ 11 RVENALAALREGRGVMVLDDEDREN----------------EGDMIFPAE-----TMTVEQMALTIRHGSGIVCLC-I-- 66 (209)
T ss_dssp HHHHHHHHHHTTCCEEEEC----CC----------------CEEEEEETT-----TCCHHHHHHHHHHBCSCCEEE-E--
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCC----------------CCCEEEEHH-----HCCHHHHHHHHHHCCCCEEEC-C--
T ss_conf 4999999998799799997899887----------------426898979-----899999999998389987873-5--
Q ss_pred CCHHHHHHHHHCCCCEEE
Q ss_conf 623455555417982799
Q gi|254780901|r 161 TSYDALQYATNQGIDVIV 178 (600)
Q Consensus 161 ~~~e~i~~a~~~GidvIV 178 (600)
. -+.+.++|+..++
T Consensus 67 -~---~~~~~~L~Lp~m~ 80 (209)
T d1g57a_ 67 -T---EDRRKQLDLPMMV 80 (209)
T ss_dssp -C---HHHHHHTTCCBSC
T ss_pred -C---HHHHHCCCCCCCC
T ss_conf -6---9998507999866
No 121
>g1sse.1 g.78.1.1 (A:,B:) YAP1 redox domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.79 E-value=6 Score=15.98 Aligned_cols=23 Identities=39% Similarity=0.518 Sum_probs=17.0
Q ss_pred HHHHHHHCCCCEEEEECCCCCHHHHH
Q ss_conf 99999977997999940788615289
Q gi|254780901|r 84 RIVQAIYNSEKIMIFGDYDVDGAASV 109 (600)
Q Consensus 84 ri~~ai~~~ekI~I~gDyD~DGitst 109 (600)
-|.+-|.+..| |||.|.||++|-
T Consensus 71 ~IWdri~s~pk---~~diDiD~LCse 93 (121)
T g1sse.1 71 EIWDRITTHPK---YSDIDVDGLCSE 93 (121)
T ss_dssp HHHHHHHTCSC---CSSCCHHHHHHH
T ss_pred HHHHHHHCCCC---CCCCCHHHHHHH
T ss_conf 99999871876---455658889999
No 122
>d1y5ia2 c.81.1.1 (A:1-1074) Respiratory nitrate reductase 1 alpha chain {Escherichia coli [TaxId: 562]}
Probab=37.67 E-value=9.1 Score=14.57 Aligned_cols=117 Identities=14% Similarity=0.126 Sum_probs=67.4
Q ss_pred HHHHHHHHHH----HHC--CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEE------C----CCCCCCCCCCHHHH
Q ss_conf 9999999999----977--997999940788615289999999997699479980------7----87433668897898
Q gi|254780901|r 79 DKAARRIVQA----IYN--SEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYI------P----DRIVDGYGPNPSLM 142 (600)
Q Consensus 79 ~~A~~ri~~a----i~~--~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~I------P----~R~~eGYGl~~~~i 142 (600)
++|.+.|.++ +++ .+.|..|+-..+-+..|-+...+|+..+|.....+- | ..+-++...+. .
T Consensus 163 DEAld~IAakl~~~~~kyGpd~i~~fs~~~a~s~~sy~~~~Rf~~liG~~~~s~~~~~cd~p~as~~~~G~~~~~~e--~ 240 (1074)
T d1y5ia2 163 QEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE--S 240 (1074)
T ss_dssp HHHHHHHHHHHHHHHHHTCGGGEEEECCCGGGSHHHHHHHHHHHHHHTCEEECCTTTTTCSCTHHHHHHSCSCCCCC--H
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC--H
T ss_conf 99999999999999997598829998178625178899999999971998068987520589999988218888899--8
Q ss_pred HHHHHCCCCEEEEECCCCC-------CHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 8742026868999648876-------234555554179827996154476555672565237888864
Q gi|254780901|r 143 EKFINEGAQLIITVDCGST-------SYDALQYATNQGIDVIVIDHHQVKSEEIPAYALVNPNRLDDL 203 (600)
Q Consensus 143 ~~~~~~g~~LiItvD~Gi~-------~~e~i~~a~~~GidvIVtDHH~~~~~~p~a~aivNP~~~~~~ 203 (600)
.++ .++++||.. |++ ...-+..|+++|..|||+|-.-.+. --.|+--+.|+ ++.+
T Consensus 241 ~D~--~nA~~II~w--GsN~~~t~~~~a~~i~eAr~~GaKvVvVDPr~t~t-a~~AD~WLpir-PGTD 302 (1074)
T d1y5ia2 241 ADW--YNSSYIIAW--GSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEI-AKLCDLWLAPK-QGTD 302 (1074)
T ss_dssp HHH--TTCSEEEEE--SCCHHHHSGGGHHHHHHHGGGTCEEEEECSSCCHH-HHTSSEEECCC-TTCH
T ss_pred HHH--HHCCEEEEE--CCCHHHHCHHHHHHHHHHHHCCCEEEEECCCCCHH-HHHHHHHCCCC-CCCH
T ss_conf 789--719789997--88967877699999999998799799989998658-99975406989-9968
No 123
>d1wu2a3 c.57.1.2 (A:181-324) MoeA, central domain {Pyrococcus horikoshii, PH1647 [TaxId: 53953]}
Probab=37.08 E-value=9.2 Score=14.51 Aligned_cols=58 Identities=16% Similarity=0.296 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHCCCCEEEE--ECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHC
Q ss_conf 8999999999769947998--0787433668897898874202686899964887623455555417
Q gi|254780901|r 108 SVALMMRFLSHCSVNANMY--IPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQ 172 (600)
Q Consensus 108 stail~~~L~~~g~~v~~~--IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~ 172 (600)
.+..|...|+++|.++..+ +|+..++ -.++++++.+ .+++|||. |-++...-++..+.
T Consensus 32 N~~~L~~~l~~~G~~v~~~~iv~Dd~~~----i~~~l~~~~~-~~DlvItt--GG~s~g~~D~~~~~ 91 (144)
T d1wu2a3 32 NSIMLQGLVEKFFGEPILYGVLPDDESI----IKETLEKAKN-ECDIVLIT--GGSAFGDKDYAHKF 91 (144)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECSCHHH----HTTHHHHHHH-CSEEEECC----------CCSTTT
T ss_pred CCHHHHHHHCCCCCCEEEEEEECCHHHH----HHHHHHHHHH-CCCEEEEC--CCCCCCCCHHCCCH
T ss_conf 7267766411358622677772563899----9999997550-05689871--66445740110211
No 124
>d1pvda1 c.31.1.3 (A:182-360) Pyruvate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.84 E-value=9.3 Score=14.48 Aligned_cols=79 Identities=16% Similarity=0.259 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE------ECCCC--CCC-C-C-CCHHHHHHHHH
Q ss_conf 999999999997799799994078861528999999999769947998------07874--336-6-8-89789887420
Q gi|254780901|r 79 DKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMY------IPDRI--VDG-Y-G-PNPSLMEKFIN 147 (600)
Q Consensus 79 ~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~------IP~R~--~eG-Y-G-l~~~~i~~~~~ 147 (600)
+++++++.+.+.+-++-+|+.++.+.---+..-+.++.+.+|+-|..- +|++. --| | | .+.....++.+
T Consensus 17 ~~~i~~~~~~l~~AkrPvii~G~g~~~~~a~~~l~~lae~~~~Pv~tt~~gkg~~~e~hp~~~G~~~g~~~~~~~~~~~~ 96 (179)
T d1pvda1 17 KEVIDTILALVKDAKNPVILADACCSRHDVKAETKKLIDLTQFPAFVTPMGKGSISEQHPRYGGVYVGTLSKPEVKEAVE 96 (179)
T ss_dssp HHHHHHHHHHHHHCSSEEEEECGGGTTTSTHHHHHHHHHHHCCCEEECGGGTTSSCTTSTTEEEECCSTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999999857897899855501434079999999962753885455555544456555646433447799999764
Q ss_pred CCCCEEEEECC
Q ss_conf 26868999648
Q gi|254780901|r 148 EGAQLIITVDC 158 (600)
Q Consensus 148 ~g~~LiItvD~ 158 (600)
++||+|.+-|
T Consensus 97 -~aDlvl~lG~ 106 (179)
T d1pvda1 97 -SADLILSVGA 106 (179)
T ss_dssp -TCSEEEEESC
T ss_pred -CCCEEEEECC
T ss_conf -2887999757
No 125
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=36.24 E-value=9.5 Score=14.41 Aligned_cols=56 Identities=16% Similarity=0.215 Sum_probs=28.4
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 9979999407886152899999999976994799807874336688978988742026868999648876
Q gi|254780901|r 92 SEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGST 161 (600)
Q Consensus 92 ~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~ 161 (600)
|+||+|.=| --+...++.+.|+..|.+|... .. ..++++.+.+..++|+|+ |..-.
T Consensus 1 NkrILvVDD----~~~~~~~l~~~L~~~g~~v~~a-----~~----g~eal~~~~~~~~dlill-D~~mP 56 (119)
T d1peya_ 1 NEKILIVDD----QSGIRILLNEVFNKEGYQTFQA-----AN----GLQALDIVTKERPDLVLL-DMKIP 56 (119)
T ss_dssp CCEEEEECS----CHHHHHHHHHHHHHTTCEEEEE-----SS----HHHHHHHHHHHCCSEEEE-ESCCT
T ss_pred CCEEEEEEC----CHHHHHHHHHHHHHCCCEEEEE-----CC----HHHHHHHHHHCCCCEEEE-ECCCC
T ss_conf 988999969----9999999999999869989995-----99----899999998079988998-14589
No 126
>d1ovma1 c.31.1.3 (A:181-341) Indole-3-pyruvate decarboxylase {Enterobacter cloacae [TaxId: 550]}
Probab=36.20 E-value=9.5 Score=14.41 Aligned_cols=83 Identities=13% Similarity=0.214 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE------ECCCCCC--C-CC--CCHHHHHHHH
Q ss_conf 7999999999997799799994078861528999999999769947998------0787433--6-68--8978988742
Q gi|254780901|r 78 CDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMY------IPDRIVD--G-YG--PNPSLMEKFI 146 (600)
Q Consensus 78 m~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~------IP~R~~e--G-YG--l~~~~i~~~~ 146 (600)
.+++++++.+.+.+-++-+|+.++.|.---++--+.++.+.+++-+..- ||++..- | |+ .+...+.++.
T Consensus 15 l~a~~~~a~~~l~~AkrP~il~G~gv~~~~a~~~l~~l~e~~~iPv~tt~~gkg~i~e~~p~~~G~~~G~~~~~~~~~~i 94 (161)
T d1ovma1 15 LKAFRDAAENKLAMSKRTALLADFLVLRHGLKHALQKWVKEVPMAHATMLMGKGIFDERQAGFYGTYSGSASTGAVKEAI 94 (161)
T ss_dssp HHHHHHHHHHHHHTCSCEEEEECHHHHHTTCHHHHHHHHHHSCCEEEECGGGTTSSCTTSTTCCCCCCGGGSCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999982899689989593755069999999996496599847767766021410235667775759999998
Q ss_pred HCCCCEEEEECCCCC
Q ss_conf 026868999648876
Q gi|254780901|r 147 NEGAQLIITVDCGST 161 (600)
Q Consensus 147 ~~g~~LiItvD~Gi~ 161 (600)
+ +++|||.+-|-.+
T Consensus 95 ~-~aDliL~iG~~l~ 108 (161)
T d1ovma1 95 E-GADTVLCVGTRFT 108 (161)
T ss_dssp H-TSSEEEEESCCCC
T ss_pred H-CCCEEEEECCCCC
T ss_conf 5-3898999777645
No 127
>d1nsja_ c.1.2.4 (A:) N-(5'phosphoribosyl)antranilate isomerase, PRAI {Thermotoga maritima [TaxId: 2336]}
Probab=35.90 E-value=7.8 Score=15.09 Aligned_cols=20 Identities=25% Similarity=0.672 Sum_probs=18.0
Q ss_pred CCCCCHHHHHHHHHCCCCEE
Q ss_conf 88762345555541798279
Q gi|254780901|r 158 CGSTSYDALQYATNQGIDVI 177 (600)
Q Consensus 158 ~Gi~~~e~i~~a~~~GidvI 177 (600)
||+++.+.+.+|.++|.|.+
T Consensus 7 CGit~~~da~~~~~~gad~i 26 (205)
T d1nsja_ 7 CGITNLEDALFSVESGADAV 26 (205)
T ss_dssp CCCCSHHHHHHHHHHTCSEE
T ss_pred CCCCCHHHHHHHHHCCCCEE
T ss_conf 28996999999996799989
No 128
>d1k4ia_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Magnaporthe grisea [TaxId: 148305]}
Probab=35.74 E-value=9.7 Score=14.35 Aligned_cols=22 Identities=23% Similarity=0.345 Sum_probs=17.5
Q ss_pred HHHHHHHHHCCCCEEEEECCCC
Q ss_conf 9999999977997999940788
Q gi|254780901|r 82 ARRIVQAIYNSEKIMIFGDYDV 103 (600)
Q Consensus 82 ~~ri~~ai~~~ekI~I~gDyD~ 103 (600)
++...+++++++.|.|+-|.|-
T Consensus 4 ie~ai~~l~~G~~viv~Dd~~R 25 (216)
T d1k4ia_ 4 IPDVIQAFKNGEFVVVLDDPSR 25 (216)
T ss_dssp HHHHHHHHHTTCCEEEECCTTT
T ss_pred HHHHHHHHHCCCEEEEEECCCC
T ss_conf 8999999988996999967998
No 129
>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}
Probab=35.73 E-value=9.7 Score=14.35 Aligned_cols=60 Identities=17% Similarity=0.345 Sum_probs=40.1
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 99799994078861528999999999769947998078743366889789887420268689996488762345555541
Q gi|254780901|r 92 SEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATN 171 (600)
Q Consensus 92 ~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~ 171 (600)
+++|+|+. |.||+- +.. ..+++.+ +.++++++.+.|..+++. .|=+-......+++
T Consensus 2 ~~~~li~~--DlDGTL-----------l~~--~~~i~~~-------~~~al~~l~~~Gi~~~i~--TGR~~~~~~~~~~~ 57 (232)
T d1xvia_ 2 QQPLLVFS--DLDGTL-----------LDS--HSYDWQP-------AAPWLTRLREANVPVILC--SSKTSAEMLYLQKT 57 (232)
T ss_dssp CCCEEEEE--ECTTTT-----------SCS--SCCSCCT-------THHHHHHHHHTTCCEEEE--CSSCHHHHHHHHHH
T ss_pred CCCEEEEE--ECCCCC-----------CCC--CCCCCHH-------HHHHHHHHHHCCCEEEEE--ECCCHHHCHHHHHH
T ss_conf 99879999--788875-----------289--6947999-------999999999779989999--68973653068887
Q ss_pred CCCC
Q ss_conf 7982
Q gi|254780901|r 172 QGID 175 (600)
Q Consensus 172 ~Gid 175 (600)
.|++
T Consensus 58 ~~~~ 61 (232)
T d1xvia_ 58 LGLQ 61 (232)
T ss_dssp TTCT
T ss_pred HCCC
T ss_conf 3457
No 130
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}
Probab=35.31 E-value=9.8 Score=14.31 Aligned_cols=77 Identities=13% Similarity=0.188 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE------ECCCCCC--C-CCCC-HHHHHHHHHCC
Q ss_conf 99999999997799799994078861528999999999769947998------0787433--6-6889-78988742026
Q gi|254780901|r 80 KAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMY------IPDRIVD--G-YGPN-PSLMEKFINEG 149 (600)
Q Consensus 80 ~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~------IP~R~~e--G-YGl~-~~~i~~~~~~g 149 (600)
++++++.+.|.+-++.+|+....+- -+..-+.++.+.+|+.|..- +|++-.- | .|+. ......+.++
T Consensus 18 ~~i~~~~~~L~~A~rPvii~G~G~~--~a~~~l~~lae~~~~Pv~tt~~~~g~~~~~hp~~~G~~G~~~~~~~~~~i~~- 94 (183)
T d2ez9a1 18 QAVTRLTQTLLAAERPLIYYGIGAR--KAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGSANRVAQKPANEALAQ- 94 (183)
T ss_dssp HHHHHHHHHHHHCSSEEEEECGGGT--TCHHHHHHHHHHHTCCEEECGGGTTSSCTTCTTBCCCCSSSSCHHHHHHHHH-
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCC--CCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC-
T ss_conf 9999999999837993999837806--3549999876404337986214554432347643333223466777766624-
Q ss_pred CCEEEEECCC
Q ss_conf 8689996488
Q gi|254780901|r 150 AQLIITVDCG 159 (600)
Q Consensus 150 ~~LiItvD~G 159 (600)
++|||.+.|-
T Consensus 95 aDlil~vG~~ 104 (183)
T d2ez9a1 95 ADVVLFVGNN 104 (183)
T ss_dssp CSEEEEESCC
T ss_pred CCCEEEEECC
T ss_conf 6745886214
No 131
>d1xvla1 c.92.2.2 (A:49-327) Mn transporter MntC {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=35.06 E-value=9.9 Score=14.28 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHCC---CCEEEEECCCCC-CCCCCCHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 528999999999769---947998078743-3668897898874202686899964887
Q gi|254780901|r 106 AASVALMMRFLSHCS---VNANMYIPDRIV-DGYGPNPSLMEKFINEGAQLIITVDCGS 160 (600)
Q Consensus 106 itstail~~~L~~~g---~~v~~~IP~R~~-eGYGl~~~~i~~~~~~g~~LiItvD~Gi 160 (600)
+||+..|+.+.+.++ ++|.+.+|.-.. +.|-+++.-+.++.. .+|+|...-|.
T Consensus 10 vas~~~l~~iv~~I~Gd~~~V~~l~p~~~dPH~y~~~p~d~~~l~~--ADliv~~G~~l 66 (279)
T d1xvla1 10 LTTFTVLADMVQNVAGDKLVVESITRIGAEIHGYEPTPSDIVKAQD--ADLILYNGMNL 66 (279)
T ss_dssp EESSHHHHHHHHHHHTTTSEEEESSCSSCCCSSCCCCHHHHHHHHT--CSEEEECCTTS
T ss_pred EEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH--CCEEEECCCCC
T ss_conf 9987699999999818844899806989796457689999999973--99999979985
No 132
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]}
Probab=34.97 E-value=9.9 Score=14.27 Aligned_cols=22 Identities=14% Similarity=0.332 Sum_probs=17.8
Q ss_pred HHHHHHHHCCCCEEEECCCCCC
Q ss_conf 4555554179827996154476
Q gi|254780901|r 164 DALQYATNQGIDVIVIDHHQVK 185 (600)
Q Consensus 164 e~i~~a~~~GidvIVtDHH~~~ 185 (600)
+.|+.|+++||.|||+=||.|.
T Consensus 73 ~~v~~a~~~gi~vild~H~~p~ 94 (340)
T d1ceoa_ 73 RCLEWCKKYNLGLVLDMHHAPG 94 (340)
T ss_dssp HHHHHHHHTTCEEEEEEEECCC
T ss_pred HHHHHHHHCCCEEEEEECCCCC
T ss_conf 9999999869979998357875
No 133
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=34.95 E-value=9.9 Score=14.26 Aligned_cols=43 Identities=21% Similarity=0.131 Sum_probs=28.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 799994078861528999999999769947998078743366889789887420268
Q gi|254780901|r 94 KIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGA 150 (600)
Q Consensus 94 kI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~ 150 (600)
||.|+| + |..++++. +.|+.-|.+|.- |..+.+.++++.+.|.
T Consensus 2 kI~iIG---~-G~mG~~lA-~~l~~~g~~V~~---------~d~~~~~~~~a~~~~~ 44 (165)
T d2f1ka2 2 KIGVVG---L-GLIGASLA-GDLRRRGHYLIG---------VSRQQSTCEKAVERQL 44 (165)
T ss_dssp EEEEEC---C-SHHHHHHH-HHHHHTTCEEEE---------ECSCHHHHHHHHHTTS
T ss_pred EEEEEE---E-CHHHHHHH-HHHHHCCCEEEE---------EECCCHHHHHHHHHHC
T ss_conf 999991---0-49899999-999978998999---------9898037799998622
No 134
>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=34.87 E-value=10 Score=14.25 Aligned_cols=42 Identities=5% Similarity=-0.091 Sum_probs=24.4
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf 789887420268689996488762345555541798279961
Q gi|254780901|r 139 PSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVID 180 (600)
Q Consensus 139 ~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtD 180 (600)
..+++-++..|++.|.||...-...+..+.++++|.|.+|..
T Consensus 44 ~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~ 85 (189)
T d1gu7a2 44 KYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITE 85 (189)
T ss_dssp HHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEH
T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCEEEEC
T ss_conf 999999852388289999036432067766651456489855
No 135
>d1xnya2 c.14.1.4 (A:268-530) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]}
Probab=34.56 E-value=4 Score=17.39 Aligned_cols=27 Identities=15% Similarity=0.081 Sum_probs=21.9
Q ss_pred CCEEEEEEECHHHCCHHHHHHHHHCCC
Q ss_conf 714760443468979999999985184
Q gi|254780901|r 475 PVFKIDGVLNASAVNIALIDMLESAGP 501 (600)
Q Consensus 475 ~~l~iD~el~~~~i~~~l~~~L~~leP 501 (600)
....+|..+++.+.-..+.+.|+.+..
T Consensus 222 ~~g~iD~VIdP~dTR~~L~~~L~~l~~ 248 (263)
T d1xnya2 222 ERGYVDAVIMPSDTRRHIVRGLRQLRT 248 (263)
T ss_dssp HHTSSSEECCGGGHHHHHHHHHHHHTT
T ss_pred HCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 746678636899999999999999752
No 136
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.55 E-value=10 Score=14.22 Aligned_cols=84 Identities=17% Similarity=0.146 Sum_probs=51.2
Q ss_pred HHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHH---HHHHHHHHHHCCCCEEEEECCCCCCCCCCCHH----HHHHH
Q ss_conf 561487999999999997799799994078861528---99999999976994799807874336688978----98874
Q gi|254780901|r 73 LILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAAS---VALMMRFLSHCSVNANMYIPDRIVDGYGPNPS----LMEKF 145 (600)
Q Consensus 73 ~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGits---tail~~~L~~~g~~v~~~IP~R~~eGYGl~~~----~i~~~ 145 (600)
+.|++++.+ .++.+.++..++|+|.|- |.++ ++.|.+..+.+|.+|....++..-=+..+..+ +.+.+
T Consensus 19 ~~~r~~~d~-~~l~~~~~~~k~i~IvGg----G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~l~~~~~~~~~~~~~~~l 93 (137)
T d1m6ia2 19 TLFRKIGDF-RSLEKISREVKSITIIGG----GFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKV 93 (137)
T ss_dssp EECCSHHHH-HHHHHHHHHCSEEEEECC----SHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHH
T ss_pred EEECCHHHH-HHHHHHHHCCCEEEEECC----CHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 998379999-999987542988999998----788999999999877755988988233545775337799999999888
Q ss_pred HHCCCCEEEEECCCCCCH
Q ss_conf 202686899964887623
Q gi|254780901|r 146 INEGAQLIITVDCGSTSY 163 (600)
Q Consensus 146 ~~~g~~LiItvD~Gi~~~ 163 (600)
.+.|+++. .++.+++.
T Consensus 94 ~~~GV~~~--~~~~V~~i 109 (137)
T d1m6ia2 94 RREGVKVM--PNAIVQSV 109 (137)
T ss_dssp HTTTCEEE--CSCCEEEE
T ss_pred HHCCCEEE--ECCEEEEE
T ss_conf 86794999--59789999
No 137
>d2pw9a1 c.97.1.5 (A:7-257) Uncharacterized protein DP1777 {Desulfotalea psychrophila [TaxId: 84980]}
Probab=33.88 E-value=10 Score=14.14 Aligned_cols=17 Identities=24% Similarity=0.163 Sum_probs=9.8
Q ss_pred HHHHHHHHHCEEEEEEE
Q ss_conf 78998842010799886
Q gi|254780901|r 387 AARLKEKFGRPSFAISF 403 (600)
Q Consensus 387 AsrL~e~y~kP~iv~s~ 403 (600)
|-.++++++-.-+-++.
T Consensus 221 av~lA~~~gitLigf~R 237 (251)
T d2pw9a1 221 GLALAKRSGATLVAYSR 237 (251)
T ss_dssp HHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHCCEEEEEEC
T ss_conf 99999981998999975
No 138
>d3ct6a1 c.54.1.2 (A:1-123) PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM {Lactococcus lactis [TaxId: 1358]}
Probab=33.74 E-value=10 Score=14.13 Aligned_cols=65 Identities=14% Similarity=0.179 Sum_probs=34.2
Q ss_pred HHHHHHHCCCCEEEEE-CCCCCCCCCCCHHHHHHHHHC--CCCEEEEECCCCCCHHHHHHHHH-CCCCEE
Q ss_conf 9999997699479980-787433668897898874202--68689996488762345555541-798279
Q gi|254780901|r 112 MMRFLSHCSVNANMYI-PDRIVDGYGPNPSLMEKFINE--GAQLIITVDCGSTSYDALQYATN-QGIDVI 177 (600)
Q Consensus 112 l~~~L~~~g~~v~~~I-P~R~~eGYGl~~~~i~~~~~~--g~~LiItvD~Gi~~~e~i~~a~~-~GidvI 177 (600)
+.+..+++..++.... .--+..+.|-+...|.+..++ +-.+++.||.||.- .-.+.+.+ .+..|.
T Consensus 18 i~el~~qm~~~~~i~~~gg~~D~~igt~~~~I~~~I~~~~~~GvlvlvDmGS~~-~~~e~~~e~~~~~v~ 86 (123)
T d3ct6a1 18 LKKLIREVAKNISLTAIGGLENGEIGTSFDRVMNAIEENEADNLLTFFDLGSAR-MNLDLVSEMTDKELT 86 (123)
T ss_dssp HHHHHHTTCSSSCEEEEESCTTSCSSCCHHHHHHHHHHSSCSEEEEEESSGGGH-HHHHHHHHTCSSEEE
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHH-HHHHHHHHHHCCCEE
T ss_conf 999999965998099953888999886999999999852889779998455399-999999986289889
No 139
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]}
Probab=33.73 E-value=10 Score=14.12 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=10.6
Q ss_pred HHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 34555554179827996154476
Q gi|254780901|r 163 YDALQYATNQGIDVIVIDHHQVK 185 (600)
Q Consensus 163 ~e~i~~a~~~GidvIVtDHH~~~ 185 (600)
.++++.+++...|+|++|-+.|.
T Consensus 37 ~~al~~~~~~~~dlillD~~mP~ 59 (123)
T d1dz3a_ 37 QDCLQMLEEKRPDILLLDIIMPH 59 (123)
T ss_dssp HHHHHHHHHHCCSEEEEESCCSS
T ss_pred HHHHHHHHHCCCCEEEECCCCCC
T ss_conf 99999998569999998389999
No 140
>d1sc6a2 c.23.12.1 (A:7-107,A:296-326) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=33.66 E-value=10 Score=14.12 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=21.7
Q ss_pred CCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEE
Q ss_conf 89789887420268689996488762345555541798279
Q gi|254780901|r 137 PNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVI 177 (600)
Q Consensus 137 l~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvI 177 (600)
++.+.++.+. ..++|.+.-.|..+. -+++|+++||.|.
T Consensus 59 i~~~~i~~~p--~Lk~I~~~gvG~D~I-Dl~aa~~~gI~V~ 96 (132)
T d1sc6a2 59 LTEDVINAAE--KLVAIGAFAIGTNQV-DLDAAAKRGIPVF 96 (132)
T ss_dssp BCHHHHHHCS--SCCEEEECSSCCTTB-CHHHHHHTTCCEE
T ss_pred CCHHHHHCCC--CCEEEEEECCCCCCC-CHHHHHHCCCEEE
T ss_conf 6755520344--422677741554556-8999985998899
No 141
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=33.63 E-value=10 Score=14.11 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=10.4
Q ss_pred HHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 34555554179827996154476
Q gi|254780901|r 163 YDALQYATNQGIDVIVIDHHQVK 185 (600)
Q Consensus 163 ~e~i~~a~~~GidvIVtDHH~~~ 185 (600)
.++++.+.+...|+|++|.+.|.
T Consensus 34 ~eAl~~l~~~~~dlvilD~~mp~ 56 (137)
T d1ny5a1 34 KEAYKLLSEKHFNVVLLDLLLPD 56 (137)
T ss_dssp HHHHHHHHHSCCSEEEEESBCSS
T ss_pred HHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 99998730255553017776654
No 142
>d2ihta1 c.31.1.3 (A:198-374) Carboxyethylarginine synthase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=33.43 E-value=10 Score=14.09 Aligned_cols=82 Identities=15% Similarity=0.190 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE------ECCCCCCCCCC---------CHHH
Q ss_conf 87999999999997799799994078861528999999999769947998------07874336688---------9789
Q gi|254780901|r 77 DCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMY------IPDRIVDGYGP---------NPSL 141 (600)
Q Consensus 77 dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~------IP~R~~eGYGl---------~~~~ 141 (600)
+-+++++++.+.+.+-++-+|+....+----+..-+.++.+.+|+-|... +|+.-.--+|. +...
T Consensus 4 ~~~~~i~~a~~lL~~AkrPvii~G~g~~~~~a~~~l~~lae~~~iPv~~t~~~kg~~p~~hp~~~G~~~~~~~G~~~~~~ 83 (177)
T d2ihta1 4 GWQKAADQAAALLAEAKHPVLVVGAAAIRSGAVPAIRALAERLNIPVITTYIAKGVLPVGHELNYGAVTGYMDGILNFPA 83 (177)
T ss_dssp THHHHHHHHHHHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECSTTTTSSCTTCTTEEEECCTTHHHHHTSCH
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHH
T ss_conf 07999999999998079979999968253426999999753155899960544658998653342300002232212389
Q ss_pred HHHHHHCCCCEEEEECCCCC
Q ss_conf 88742026868999648876
Q gi|254780901|r 142 MEKFINEGAQLIITVDCGST 161 (600)
Q Consensus 142 i~~~~~~g~~LiItvD~Gi~ 161 (600)
..++. +.++|||.+ |+.
T Consensus 84 ~~~~l-~~aDlvl~v--G~~ 100 (177)
T d2ihta1 84 LQTMF-APVDLVLTV--GYD 100 (177)
T ss_dssp HHHHH-TTCCEEEEE--TCC
T ss_pred HHHHH-CCCCCEEEE--CCC
T ss_conf 99876-067745786--245
No 143
>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=33.39 E-value=10 Score=14.08 Aligned_cols=51 Identities=12% Similarity=0.219 Sum_probs=32.1
Q ss_pred HHHCCCHHHHHHHHHHH-HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC-EEE
Q ss_conf 55614879999999999-9779979999407886152899999999976994-799
Q gi|254780901|r 72 PLILTDCDKAARRIVQA-IYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVN-ANM 125 (600)
Q Consensus 72 P~~l~dm~~A~~ri~~a-i~~~ekI~I~gDyD~DGitstail~~~L~~~g~~-v~~ 125 (600)
|+.+++-++-.+.+.+. |.++..|+||. ..|..+++-++-.|+.+|.+ |..
T Consensus 64 ~~~~p~~~~~~~~l~~~Gi~~~~~vVvY~---~~~~~~A~r~~~~L~~~G~~~V~v 116 (147)
T d1urha1 64 PHMLPRPETFAVAMRELGVNQDKHLIVYD---EGNLFSAPRAWWMLRTFGVEKVSI 116 (147)
T ss_dssp SSCCCCHHHHHHHHHHTTCCTTSEEEEEC---SSSCSSHHHHHHHHHHTTCSCEEE
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCEEEEEE---CCCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 66489889999999971767898699983---898623215788988631662689
No 144
>d2naca2 c.23.12.1 (A:1-147,A:336-374) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}
Probab=33.35 E-value=10 Score=14.08 Aligned_cols=82 Identities=21% Similarity=0.211 Sum_probs=51.6
Q ss_pred HHHHHH-HCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 999999-7799799994078861528999999999769947998078743366889789887420268689996488762
Q gi|254780901|r 84 RIVQAI-YNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTS 162 (600)
Q Consensus 84 ri~~ai-~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~ 162 (600)
-|.+-+ +++-.+.++.|.|.|... +-+-+ -.+++...-| | .++-++.+.|+.+.. -++|++.-.|+ +
T Consensus 58 glr~~Le~~GhelV~~sd~~~~~~e----l~k~l--~DADivI~~p--f-~~~~lt~e~i~~ap~--LKlI~~~g~G~-D 125 (186)
T d2naca2 58 GLRKYLESNGHTLVVTSDKDGPDSV----FEREL--VDADVVISQP--F-WPAYLTPERIAKAKN--LKLALTAGIGS-D 125 (186)
T ss_dssp GCHHHHHHTTCEEEEESCCSSTTSH----HHHHH--TTCSEEEEBT--T-BCCCBCHHHHHHCTT--CCEEEESSSCC-T
T ss_pred HHHHHHHHCCCEEEEECCCCCCHHH----HHHHC--CCCCEEEEEC--C-CCCCCCHHHHHCCCC--CEEEEEECCCC-C
T ss_conf 1799999789789982698897089----98623--5687899814--6-452329999834822--10999925688-6
Q ss_pred HHHHHHHHHCCCCEE
Q ss_conf 345555541798279
Q gi|254780901|r 163 YDALQYATNQGIDVI 177 (600)
Q Consensus 163 ~e~i~~a~~~GidvI 177 (600)
+=-+++|+++||.|.
T Consensus 126 ~VDl~aa~e~gI~V~ 140 (186)
T d2naca2 126 HVDLQSAIDRNVTVA 140 (186)
T ss_dssp TBCHHHHHHTTCEEE
T ss_pred CCCHHHHHHCCCEEE
T ss_conf 165889975997899
No 145
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}
Probab=33.30 E-value=11 Score=14.07 Aligned_cols=44 Identities=23% Similarity=0.416 Sum_probs=33.2
Q ss_pred HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 988742026868999648876234555554179827996154476
Q gi|254780901|r 141 LMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQVK 185 (600)
Q Consensus 141 ~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~~~ 185 (600)
.+.....+.+|+|| |-.|++-.-..-.|.++|.+|+|+|-....
T Consensus 8 ~~~~~p~e~~DVlV-IG~G~aGl~aA~~la~~G~~V~lvEK~~~~ 51 (308)
T d1y0pa2 8 ALASAPHDTVDVVV-VGSGGAGFSAAISATDSGAKVILIEKEPVI 51 (308)
T ss_dssp HHHSCCSEECSEEE-ECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCCCCCCCEEE-ECCCHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 03358888687899-995899999999999889938999647989
No 146
>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}
Probab=33.11 E-value=11 Score=14.05 Aligned_cols=16 Identities=6% Similarity=-0.008 Sum_probs=7.1
Q ss_pred HHHHHHHHHHCCCCEE
Q ss_conf 9999999997699479
Q gi|254780901|r 109 VALMMRFLSHCSVNAN 124 (600)
Q Consensus 109 tail~~~L~~~g~~v~ 124 (600)
...+..+|+..|.+|.
T Consensus 16 ~~~l~~~L~~~g~~v~ 31 (123)
T d1dbwa_ 16 RKSLAFMLTMNGFAVK 31 (123)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHCCCEEE
T ss_conf 9999999998799999
No 147
>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]}
Probab=33.00 E-value=11 Score=14.04 Aligned_cols=30 Identities=23% Similarity=0.457 Sum_probs=13.6
Q ss_pred HHHHCCCCEEEECC-CCCCCCCCCCEEEECC
Q ss_conf 55417982799615-4476555672565237
Q gi|254780901|r 168 YATNQGIDVIVIDH-HQVKSEEIPAYALVNP 197 (600)
Q Consensus 168 ~a~~~GidvIVtDH-H~~~~~~p~a~aivNP 197 (600)
.+++.+.|+++.=| |.|.-.......+|||
T Consensus 114 ~~~~~~~dvvi~GHTH~~~~~~~~g~~~iNP 144 (193)
T d2a22a1 114 WQRRLDCDILVTGHTHKLRVFEKNGKLFLNP 144 (193)
T ss_dssp HHHHHTCSEEEECSSCCCEEEEETTEEEEEC
T ss_pred HHHHCCCCEEEECCCCCCEEEEECCEEEEEC
T ss_conf 8762489989986756753899999999989
No 148
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.82 E-value=11 Score=14.02 Aligned_cols=33 Identities=12% Similarity=0.265 Sum_probs=13.5
Q ss_pred HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 9779979999407886152899999999976994799
Q gi|254780901|r 89 IYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANM 125 (600)
Q Consensus 89 i~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~ 125 (600)
++.+++|+|+| +-|-.+.+. ....+.+|+++..
T Consensus 26 ~~~g~~VlV~G---a~G~vG~~a-iq~a~~~G~~vi~ 58 (174)
T d1yb5a2 26 VKAGESVLVHG---ASGGVGLAA-CQIARAYGLKILG 58 (174)
T ss_dssp CCTTCEEEEET---CSSHHHHHH-HHHHHHTTCEEEE
T ss_pred CCCCCEEEEEE---CCCCCCCCC-CCCCCCCCCCCCC
T ss_conf 99999899984---465542123-2110036861002
No 149
>d2aeea1 c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus pyogenes [TaxId: 1314]}
Probab=32.21 E-value=11 Score=13.95 Aligned_cols=103 Identities=20% Similarity=0.290 Sum_probs=56.3
Q ss_pred HHHCCCCHHHCCCHHHHHHHHHHHHHC-CCCE-EEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHH
Q ss_conf 777189955614879999999999977-9979-99940788615289999999997699479980787433668897898
Q gi|254780901|r 65 IRLLMPDPLILTDCDKAARRIVQAIYN-SEKI-MIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLM 142 (600)
Q Consensus 65 l~~l~~dP~~l~dm~~A~~ri~~ai~~-~ekI-~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i 142 (600)
.+.+..+|..+.-+ ++.+.+.|.. ...+ .|.| -..-|+.-++.+...+ +... .|+ .+...+||.... +
T Consensus 39 ~~~~~~~p~~~~~i---~~~~~~~i~~~~~~~d~I~G-~a~~Gip~a~~ia~~~---~~p~-~~v-RK~~K~~G~~~~-i 108 (208)
T d2aeea1 39 NRVTLSYPKTRDLI---ENGFVETIKAHFPEVEVIAG-TATAGIPHGAIIADKM---TLPF-AYI-RSKPKDHGAGNQ-I 108 (208)
T ss_dssp GGGGGGCHHHHHHH---HHHHHHHHHHHCTTCCEEEE-ETTTTHHHHHHHHHHH---TCCE-EEE-CSSCC----CCS-E
T ss_pred CHHHHCCHHHHHHH---HHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHH---CCCE-EEE-EECCCCCCCCCE-E
T ss_conf 81231497899999---99998777640332220024-3011467888888750---6605-786-501356653201-2
Q ss_pred HHHHHCCCCEEEEE---CCCCCCHHHHHHHHHCCCCEE
Q ss_conf 87420268689996---488762345555541798279
Q gi|254780901|r 143 EKFINEGAQLIITV---DCGSTSYDALQYATNQGIDVI 177 (600)
Q Consensus 143 ~~~~~~g~~LiItv---D~Gi~~~e~i~~a~~~GidvI 177 (600)
+.....|-+.+|.= -.|.|..++++.+++.|..|+
T Consensus 109 eG~~~~G~~VlvVeDviTTG~S~~~ai~~l~~~g~~V~ 146 (208)
T d2aeea1 109 EGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVL 146 (208)
T ss_dssp ESCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEE
T ss_pred ECCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHCCCEEE
T ss_conf 01236897799856654411558889999997699798
No 150
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.81 E-value=11 Score=13.90 Aligned_cols=71 Identities=17% Similarity=0.260 Sum_probs=44.3
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 79979999407886152899999999976994799807874336688978988742026868999648876234555554
Q gi|254780901|r 91 NSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYAT 170 (600)
Q Consensus 91 ~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~ 170 (600)
..+||+|.| +-|-.+.+++.+.|++ |.+|.... |-. +........++.+ +..|. ++.+.++.+-
T Consensus 2 ~~kkIlV~G---atG~iG~~v~~~Ll~~-g~~V~~~~--R~~-------~~~~~~~~~~~~~-~~gD~--~d~~~l~~al 65 (205)
T d1hdoa_ 2 AVKKIAIFG---ATGQTGLTTLAQAVQA-GYEVTVLV--RDS-------SRLPSEGPRPAHV-VVGDV--LQAADVDKTV 65 (205)
T ss_dssp CCCEEEEES---TTSHHHHHHHHHHHHT-TCEEEEEE--SCG-------GGSCSSSCCCSEE-EESCT--TSHHHHHHHH
T ss_pred CCCEEEEEC---CCCHHHHHHHHHHHHC-CCEEEEEE--CCH-------HHCCCCCCCCCCC-CCCCC--CCHHHHHHHH
T ss_conf 988899999---9878999999999978-69899998--371-------6455421235320-11222--1145699986
Q ss_pred HCCCCEEE
Q ss_conf 17982799
Q gi|254780901|r 171 NQGIDVIV 178 (600)
Q Consensus 171 ~~GidvIV 178 (600)
.|.|++|
T Consensus 66 -~~~d~vi 72 (205)
T d1hdoa_ 66 -AGQDAVI 72 (205)
T ss_dssp -TTCSEEE
T ss_pred -CCCCEEE
T ss_conf -5987899
No 151
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}
Probab=31.75 E-value=11 Score=13.89 Aligned_cols=87 Identities=11% Similarity=0.069 Sum_probs=51.1
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCH-HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 97999940788615289999999997699479980787433668897-89887420268689996488762345555541
Q gi|254780901|r 93 EKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNP-SLMEKFINEGAQLIITVDCGSTSYDALQYATN 171 (600)
Q Consensus 93 ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~-~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~ 171 (600)
++|.|+|--+--|-.+..++ +.|...|.++...=|++ .+-.|+.. ..+.++.+ .+++++.+-......+.++.+.+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~-~~L~~~g~~V~pVnP~~-~~i~G~~~y~sl~~lp~-~~D~vvi~vp~~~~~~~l~~~~~ 78 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIIL-KDLLSKGFEVLPVNPNY-DEIEGLKCYRSVRELPK-DVDVIVFVVPPKVGLQVAKEAVE 78 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHH-HHHHHTTCEEEEECTTC-SEETTEECBSSGGGSCT-TCCEEEECSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCCHHHHH-HHHHHCCCEEEEECCCC-CCCCCCCCCCCCHHCCC-CCEEEEEEECHHHHHHHHHHHHH
T ss_conf 67999842699998099999-99998899799981334-22158545566111021-10379998178999999999986
Q ss_pred CCCCEEEECCC
Q ss_conf 79827996154
Q gi|254780901|r 172 QGIDVIVIDHH 182 (600)
Q Consensus 172 ~GidvIVtDHH 182 (600)
.|+..++....
T Consensus 79 ~g~k~v~~~~g 89 (116)
T d1y81a1 79 AGFKKLWFQPG 89 (116)
T ss_dssp TTCCEEEECTT
T ss_pred CCCCEEEECCC
T ss_conf 69965885065
No 152
>d1byka_ c.93.1.1 (A:) Trehalose repressor, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.64 E-value=11 Score=13.88 Aligned_cols=39 Identities=5% Similarity=0.093 Sum_probs=17.2
Q ss_pred HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCC
Q ss_conf 988742026868999648876234555554179827996154
Q gi|254780901|r 141 LMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHH 182 (600)
Q Consensus 141 ~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH 182 (600)
.++.+...+++=+|.. +.+... .+.+...++.+++++..
T Consensus 50 ~i~~l~~~~vdgiIi~--~~~~~~-~~~~~~~~~p~v~i~~~ 88 (255)
T d1byka_ 50 HLGVLKRRNIDGVVLF--GFTGIT-EEMLAHWQSSLVLLARD 88 (255)
T ss_dssp HHHHHHTTTCCEEEEE--CCTTCC-TTTSGGGSSSEEEESSC
T ss_pred HHHHHHHCCCCCEEEC--CCCCHH-HHHHHHCCCCEEEECCC
T ss_conf 9999983265520100--244239-99999769999981667
No 153
>d2f7wa1 c.57.1.1 (A:2-174) MogA {Shewanella oneidensis [TaxId: 70863]}
Probab=31.45 E-value=11 Score=13.86 Aligned_cols=59 Identities=19% Similarity=0.167 Sum_probs=34.6
Q ss_pred EEEEEC---CCCCHHHHHHHHHHHHHHCCCCE---EE-EECCCCCCCCCCCHHHHHHHHHCCCCEEEEE
Q ss_conf 999940---78861528999999999769947---99-8078743366889789887420268689996
Q gi|254780901|r 95 IMIFGD---YDVDGAASVALMMRFLSHCSVNA---NM-YIPDRIVDGYGPNPSLMEKFINEGAQLIITV 156 (600)
Q Consensus 95 I~I~gD---yD~DGitstail~~~L~~~g~~v---~~-~IP~R~~eGYGl~~~~i~~~~~~g~~LiItv 156 (600)
|.+.|| +..--=+++..+.+.|...|.++ .| .||+...+ +.....+...+.+++||+|.
T Consensus 7 IitvsD~~~~G~~~D~~gp~l~~~L~~~G~~~~~v~~~ivpDd~~~---I~~~l~~~~~~~~~dlIitt 72 (173)
T d2f7wa1 7 IVTVSDRASAGIYEDISGKAIIDTLNDYLTSEWEPIYQVIPDEQDV---IETTLIKMADEQDCCLIVTT 72 (173)
T ss_dssp EEEECHHHHHCCSCCHHHHHHHHHHHHHBCSCEEEEEEEECSCHHH---HHHHHHHHHHTSCEEEEEEE
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHH---HHHHHHHHHHCCCCCEEEEE
T ss_conf 9996888767986678799999999982987548889970885898---88876433221465189984
No 154
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=31.07 E-value=11 Score=13.81 Aligned_cols=51 Identities=20% Similarity=0.276 Sum_probs=22.8
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECC
Q ss_conf 79999407886152899999999976994799807874336688978988742026868999648
Q gi|254780901|r 94 KIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDC 158 (600)
Q Consensus 94 kI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~ 158 (600)
||+|.= |-.+...++...|+..|.+|... .+ ..++++.+.+..++|+| +|-
T Consensus 2 rILiVd----Dd~~~~~~l~~~L~~~g~~v~~a-----~~----~~eal~~~~~~~~dlil-lD~ 52 (117)
T d2a9pa1 2 KILIVD----DEKPISDIIKFNMTKEGYEVVTA-----FN----GREALEQFEAEQPDIII-LDL 52 (117)
T ss_dssp EEEEEC----SCHHHHHHHHHHHHHTTCEEEEE-----SS----HHHHHHHHHHHCCSEEE-ECS
T ss_pred EEEEEE----CCHHHHHHHHHHHHHCCCEEEEE-----CC----HHHHHHHHHHCCCCEEE-ECC
T ss_conf 899997----99999999999999879999998-----78----79999999836987898-504
No 155
>d1qkka_ c.23.1.1 (A:) Transcriptional regulatory protein DctD, receiver domain {Sinorhizobium meliloti [TaxId: 382]}
Probab=30.99 E-value=11 Score=13.80 Aligned_cols=23 Identities=13% Similarity=0.070 Sum_probs=10.5
Q ss_pred HHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 34555554179827996154476
Q gi|254780901|r 163 YDALQYATNQGIDVIVIDHHQVK 185 (600)
Q Consensus 163 ~e~i~~a~~~GidvIVtDHH~~~ 185 (600)
.++++.+++.-.|+|++|.+.|.
T Consensus 34 ~~al~~l~~~~~dlil~D~~mP~ 56 (140)
T d1qkka_ 34 TEALAGLSADFAGIVISDIRMPG 56 (140)
T ss_dssp HHHHHTCCTTCCSEEEEESCCSS
T ss_pred HHHHHHHHCCCCCHHHHHHCCCC
T ss_conf 78999974558516777633689
No 156
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]}
Probab=30.42 E-value=12 Score=13.73 Aligned_cols=101 Identities=16% Similarity=0.304 Sum_probs=61.2
Q ss_pred HHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEE-EEECCCCCCCCCCC-HHHHHHHHHC-C
Q ss_conf 5614879999999999977997999940788615289999999997699479-98078743366889-7898874202-6
Q gi|254780901|r 73 LILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNAN-MYIPDRIVDGYGPN-PSLMEKFINE-G 149 (600)
Q Consensus 73 ~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~-~~IP~R~~eGYGl~-~~~i~~~~~~-g 149 (600)
..+..++.-...+..+.+++++.+|+.+ |+||-.=++++.+-++. +.++. ...| |||-+ .+.++++.-- |
T Consensus 34 ~kI~~~~~ilp~Le~~~~~~rPLlIIA~-di~~eaL~~Lv~N~~~g-~l~v~aVkaP-----~fG~~r~~~L~DlAi~tG 106 (145)
T d1srva_ 34 KKVSNVRELLPILEQVAQTGKPLLIIAE-DVEGEALATLVVNKLRG-TLSVAAVKAP-----GFGDRRKEMLKDIAAVTG 106 (145)
T ss_dssp SEECCHHHHHHHHHHHHTTTCCEEEEES-EECHHHHHHHHHHHHTT-SCCEEEEECC-----SSHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEEC-CCCHHHHHHHHHHHHCC-CEEEEEEECC-----CCCHHHHHHHHHHHHHHC
T ss_conf 6414499999999999972995799967-66788999999987358-5379998189-----866779999863364519
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCC--CEEEECCCC
Q ss_conf 8689996488762345555541798--279961544
Q gi|254780901|r 150 AQLIITVDCGSTSYDALQYATNQGI--DVIVIDHHQ 183 (600)
Q Consensus 150 ~~LiItvD~Gi~~~e~i~~a~~~Gi--dvIVtDHH~ 183 (600)
.-+++.|.|.. .+.+ ....+|- .|+|+..+.
T Consensus 107 -a~v~~~~~g~~-l~~~-~~~~LGsa~kv~vtkd~T 139 (145)
T d1srva_ 107 -GTVISEELGFK-LENA-TLSMLGRAERVRITKDET 139 (145)
T ss_dssp -CCEECTTTTCC-GGGC-CGGGCEEEEEEEECSSCE
T ss_pred -CEEECCCCCCC-CCCC-CHHHCCCCCEEEEECCCC
T ss_conf -88643545744-3659-987988435899928964
No 157
>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}
Probab=30.39 E-value=12 Score=13.73 Aligned_cols=82 Identities=15% Similarity=0.137 Sum_probs=36.0
Q ss_pred HCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEE-CCCC---CCC---CCCCHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 77997999940788615289999999997699479980-7874---336---6889789887420268689996488762
Q gi|254780901|r 90 YNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYI-PDRI---VDG---YGPNPSLMEKFINEGAQLIITVDCGSTS 162 (600)
Q Consensus 90 ~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~I-P~R~---~eG---YGl~~~~i~~~~~~g~~LiItvD~Gi~~ 162 (600)
.++.|++|.|=---.|..-|..|. ..|.++..=+ |.+- .+| |+.=.+++++. .-++++|...-- .+
T Consensus 4 ~k~trVlvQGiTG~~G~~ht~~m~----~yGT~vVaGVtPgkgG~~~~giPVf~sV~eAv~~~-~~~~SvIfVPp~--~a 76 (119)
T d2nu7a1 4 DKNTKVICQGFTGSQGTFHSEQAI----AYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAAT-GATASVIYVPAP--FC 76 (119)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHH----HHTCEEEEEECTTCTTEEETTEEEESSHHHHHHHH-CCCEEEECCCGG--GH
T ss_pred CCCCCEEEECCCCCHHHHHHHHHH----HHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHH-CCCEEEEECCHH--HH
T ss_conf 699828997688848789999999----85883289872598876307986155899999976-998699962478--88
Q ss_pred HHHHHHHHHCCCCEEE
Q ss_conf 3455555417982799
Q gi|254780901|r 163 YDALQYATNQGIDVIV 178 (600)
Q Consensus 163 ~e~i~~a~~~GidvIV 178 (600)
.+++-.|-+.||.+||
T Consensus 77 ~dA~~EAi~agI~~iV 92 (119)
T d2nu7a1 77 KDSILEAIDAGIKLII 92 (119)
T ss_dssp HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHCCCCEEE
T ss_conf 8999999977998799
No 158
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=30.32 E-value=12 Score=13.72 Aligned_cols=52 Identities=12% Similarity=0.194 Sum_probs=21.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCC
Q ss_conf 799994078861528999999999769947998078743366889789887420268689996488
Q gi|254780901|r 94 KIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCG 159 (600)
Q Consensus 94 kI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~G 159 (600)
+|+|.-| --+..-++...|+..|.+|... .. -.++++.+....++||| +|..
T Consensus 10 ~ILiVDD----~~~~~~~l~~~L~~~g~~v~~a-----~~----g~ea~~~~~~~~~dlil-lD~~ 61 (133)
T d2ayxa1 10 MILVVDD----HPINRRLLADQLGSLGYQCKTA-----ND----GVDALNVLSKNHIDIVL-SDVN 61 (133)
T ss_dssp EEEEEES----SHHHHHHHHHHHHHHTSEEEEE-----CC----SHHHHHHHHHSCCSEEE-EEES
T ss_pred EEEEEEC----CHHHHHHHHHHHHHCCCEEEEE-----CC----HHHHHHHHHCCCCEEEE-EECC
T ss_conf 8999989----9999999999999759889997-----74----87789987345745999-9536
No 159
>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=29.96 E-value=12 Score=13.68 Aligned_cols=87 Identities=14% Similarity=0.199 Sum_probs=51.0
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCC---CCEEEEECCCCCCCCCCCH--------HHHHHHHHCCCCEEEEECCCCC
Q ss_conf 9799994078861528999999999769---9479980787433668897--------8988742026868999648876
Q gi|254780901|r 93 EKIMIFGDYDVDGAASVALMMRFLSHCS---VNANMYIPDRIVDGYGPNP--------SLMEKFINEGAQLIITVDCGST 161 (600)
Q Consensus 93 ekI~I~gDyD~DGitstail~~~L~~~g---~~v~~~IP~R~~eGYGl~~--------~~i~~~~~~g~~LiItvD~Gi~ 161 (600)
+||+|.| +-|.++.-++...|..-. .++.+ ..++-..|+-+.. ...+...-.++++++++=-.-.
T Consensus 2 kkVaIvG---ATG~VGqeli~~Ll~~~~~p~~~l~~-~~ss~s~g~~~~~~~~~~~~~~~~~~~~~~~~DivF~a~~~~~ 77 (146)
T d1t4ba1 2 QNVGFIG---WRGMVGSVLMQRMVEERDFDAIRPVF-FSTSQLGQAAPSFGGTTGTLQDAFDLEALKALDIIVTCQGGDY 77 (146)
T ss_dssp CEEEEES---TTSHHHHHHHHHHHHTTGGGGSEEEE-EESSSTTSBCCGGGTCCCBCEETTCHHHHHTCSEEEECSCHHH
T ss_pred CEEEEEC---CCCHHHHHHHHHHHHCCCCCEEEEEE-EECCCCCCCCCCCCCCCEEEECCCCHHHHHCCCEEEEECCCHH
T ss_conf 4899989---85499999999999479988068999-5336556656500687134320456335415737999368307
Q ss_pred CHHHHHHHHHCCCCEEEECCCC
Q ss_conf 2345555541798279961544
Q gi|254780901|r 162 SYDALQYATNQGIDVIVIDHHQ 183 (600)
Q Consensus 162 ~~e~i~~a~~~GidvIVtDHH~ 183 (600)
+.+-...+.+.|.+.+|+|.-.
T Consensus 78 s~~~~~~~~~~g~~~~VID~Ss 99 (146)
T d1t4ba1 78 TNEIYPKLRESGWQGYWIDAAS 99 (146)
T ss_dssp HHHHHHHHHHTTCCCEEEECSS
T ss_pred HHHHHHHHHHCCCCEECCCCCC
T ss_conf 7786399986599756236874
No 160
>d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]}
Probab=29.65 E-value=8.3 Score=14.86 Aligned_cols=26 Identities=27% Similarity=0.378 Sum_probs=19.1
Q ss_pred CCCCCCCCCC-CCCCEEECCCCHHHHH
Q ss_conf 5301156532-2231464222158899
Q gi|254780901|r 432 GILVKGGGHA-MAAGLTVERVNFGRLC 457 (600)
Q Consensus 432 ~ll~~~GGH~-~AaG~ti~~~~l~~f~ 457 (600)
.|+.+|||.+ -|+||++.-+.+-.+.
T Consensus 287 ~L~~~f~g~~~pAvGfsi~ld~l~~~l 313 (322)
T d1kmma2 287 GLVEQLGGRATPAVGFAMGLERLVLLV 313 (322)
T ss_dssp THHHHTTSCCCCEEEEEEEHHHHHHHH
T ss_pred HHHHHCCCCCCCEEEEEECHHHHHHHH
T ss_conf 899863899997578995299999999
No 161
>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}
Probab=29.57 E-value=12 Score=13.63 Aligned_cols=85 Identities=15% Similarity=0.173 Sum_probs=46.2
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCC---CCEEEEECCCCCCCC--------CCCHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 799994078861528999999999769---947998078743366--------889789887420268689996488762
Q gi|254780901|r 94 KIMIFGDYDVDGAASVALMMRFLSHCS---VNANMYIPDRIVDGY--------GPNPSLMEKFINEGAQLIITVDCGSTS 162 (600)
Q Consensus 94 kI~I~gDyD~DGitstail~~~L~~~g---~~v~~~IP~R~~eGY--------Gl~~~~i~~~~~~g~~LiItvD~Gi~~ 162 (600)
||.|.| +-|.++.-++...+..-. .++.++--+| ..|. .......+...-.+++++.++=-.-.+
T Consensus 2 KVaIiG---ATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~-~~gk~~~~~~~~~~~~~~~~~~~~~~~DvvF~alp~~~s 77 (147)
T d1mb4a1 2 RVGLVG---WRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGKDAGMLHDAFDIESLKQLDAVITCQGGSYT 77 (147)
T ss_dssp EEEEES---CSSHHHHHHHHHHHHTTGGGGSEEEEEESSC-CSSBCCCSSSCCCBCEETTCHHHHTTCSEEEECSCHHHH
T ss_pred EEEEEC---CCCHHHHHHHHHHHHCCCCCCEEEEEECCCC-CCCCCCCCCCCCEEEECCCCHHHHCCCCEEEEECCCHHH
T ss_conf 799999---8459999999999956899946889821444-566232348850343214315564366579980682678
Q ss_pred HHHHHHHHHCCCCEEEECCC
Q ss_conf 34555554179827996154
Q gi|254780901|r 163 YDALQYATNQGIDVIVIDHH 182 (600)
Q Consensus 163 ~e~i~~a~~~GidvIVtDHH 182 (600)
.+-+..+.+.|..++|+|.-
T Consensus 78 ~~~~~~l~~~g~~~~VIDlS 97 (147)
T d1mb4a1 78 EKVYPALRQAGWKGYWIDAA 97 (147)
T ss_dssp HHHHHHHHHTTCCSEEEESS
T ss_pred HHHHHHHHHCCCCEEEEECC
T ss_conf 89769999759956999588
No 162
>d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Synechocystis sp. PCC 6803 [TaxId: 1148]}
Probab=29.56 E-value=12 Score=13.63 Aligned_cols=89 Identities=17% Similarity=0.249 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCC-CH-----HHHHHHHHHHHHHC-CC--CEEEEECCCCCCCCCCCHHHHHHHH
Q ss_conf 4879999999999977997999940788-61-----52899999999976-99--4799807874336688978988742
Q gi|254780901|r 76 TDCDKAARRIVQAIYNSEKIMIFGDYDV-DG-----AASVALMMRFLSHC-SV--NANMYIPDRIVDGYGPNPSLMEKFI 146 (600)
Q Consensus 76 ~dm~~A~~ri~~ai~~~ekI~I~gDyD~-DG-----itstail~~~L~~~-g~--~v~~~IP~R~~eGYGl~~~~i~~~~ 146 (600)
.++++.++++.++ +-. .|. +|+ || +|-..-..+.++.. .. +++..+-+ ....++++.
T Consensus 15 ~~l~~~i~~l~~~---g~d-~iH--iDImDG~Fvpn~t~~~~~~~~i~~~t~~~~dvHLMv~~--------P~~~i~~~~ 80 (221)
T d1tqja_ 15 SRLGEEIKAVDEA---GAD-WIH--VDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVE--------PEKYVEDFA 80 (221)
T ss_dssp GGHHHHHHHHHHT---TCS-EEE--EEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSS--------GGGTHHHHH
T ss_pred HHHHHHHHHHHHC---CCC-EEE--EECCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEC--------HHHHHHHHH
T ss_conf 9999999999974---998-899--98726974676564827677665316762334678708--------889899874
Q ss_pred HCCCCEEEEECCCCCC----HHHHHHHHHCCCCEEEE
Q ss_conf 0268689996488762----34555554179827996
Q gi|254780901|r 147 NEGAQLIITVDCGSTS----YDALQYATNQGIDVIVI 179 (600)
Q Consensus 147 ~~g~~LiItvD~Gi~~----~e~i~~a~~~GidvIVt 179 (600)
+.|++.++. -.-+.+ .+-+.+.++.|+.+-+.
T Consensus 81 ~~g~~~i~~-H~E~~~~~~~~~~~~~i~~~g~~~Gia 116 (221)
T d1tqja_ 81 KAGADIISV-HVEHNASPHLHRTLCQIRELGKKAGAV 116 (221)
T ss_dssp HHTCSEEEE-ECSTTTCTTHHHHHHHHHHTTCEEEEE
T ss_pred HCCCEEEEE-EECCCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 314527998-622456736689999999779977999
No 163
>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}
Probab=29.56 E-value=12 Score=13.63 Aligned_cols=60 Identities=17% Similarity=0.151 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 999999999977997999940788615289999999997699479980787433668897898874202686899
Q gi|254780901|r 80 KAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLII 154 (600)
Q Consensus 80 ~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiI 154 (600)
.|+++. .++.+++|+|+| + |-.+ .....+++.+|+...+-+- .+.+-.+.+.+-|++-.|
T Consensus 18 ~a~~~a--~~~~g~~VlI~G---a-G~vG-l~~~q~ak~~Ga~~Vi~~d--------~~~~r~~~a~~lGa~~~i 77 (174)
T d1jqba2 18 HGAELA--DIEMGSSVVVIG---I-GAVG-LMGIAGAKLRGAGRIIGVG--------SRPICVEAAKFYGATDIL 77 (174)
T ss_dssp HHHHHT--TCCTTCCEEEEC---C-SHHH-HHHHHHHHTTTCSCEEEEC--------CCHHHHHHHHHHTCSEEE
T ss_pred HHHHHH--CCCCCCEEEEEC---C-CCCH-HHHHHHHHCCCCCCCCCCC--------CHHHHHHHHHHHCCCCCC
T ss_conf 999985--999999899974---7-7502-4445543022232221002--------104667778760763324
No 164
>d1p5dx1 c.84.1.1 (X:9-154) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=29.35 E-value=12 Score=13.60 Aligned_cols=31 Identities=23% Similarity=0.228 Sum_probs=13.9
Q ss_pred CCCCCCHHHHHHHH-HCCC--CEEEECCCCCCCC
Q ss_conf 48876234555554-1798--2799615447655
Q gi|254780901|r 157 DCGSTSYDALQYAT-NQGI--DVIVIDHHQVKSE 187 (600)
Q Consensus 157 D~Gi~~~e~i~~a~-~~Gi--dvIVtDHH~~~~~ 187 (600)
|+|......+.++. .++. -++||==|.|++-
T Consensus 73 ~~g~~pTP~l~~~~~~~~~~~GI~ITASHNP~~~ 106 (146)
T d1p5dx1 73 DVGMVPTPVLYYAANVLEGKSGVMLTGSHNPPDY 106 (146)
T ss_dssp EEEECCHHHHHHHHHHSSCSEEEEECCTTSCTTE
T ss_pred ECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCC
T ss_conf 4544560889999986246733688624786010
No 165
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=29.05 E-value=12 Score=13.57 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=18.3
Q ss_pred EEECCCCCC-HHHHHHHHHCCCCEEEE
Q ss_conf 996488762-34555554179827996
Q gi|254780901|r 154 ITVDCGSTS-YDALQYATNQGIDVIVI 179 (600)
Q Consensus 154 ItvD~Gi~~-~e~i~~a~~~GidvIVt 179 (600)
..+|+|.+. +-...+++++|+++.|+
T Consensus 5 ~iiD~g~~~~~~i~r~l~~lg~~~~i~ 31 (196)
T d2a9va1 5 YVVDNGGQWTHREWRVLRELGVDTKIV 31 (196)
T ss_dssp EEEEESCCTTCHHHHHHHHTTCBCCEE
T ss_pred EEEECCCCHHHHHHHHHHHCCCEEEEE
T ss_conf 999898729999999999789869999
No 166
>d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=28.91 E-value=12 Score=13.55 Aligned_cols=17 Identities=12% Similarity=0.106 Sum_probs=9.6
Q ss_pred CCHHHHHHHHHHHHHHHHC
Q ss_conf 5812222227899884201
Q gi|254780901|r 378 WHPGIVGLLAARLKEKFGR 396 (600)
Q Consensus 378 wh~GViGIVAsrL~e~y~k 396 (600)
+..| |.+|.+++..+..
T Consensus 103 ~S~G--g~~a~~~a~~~p~ 119 (203)
T d2r8ba1 103 FSNG--ANILANVLIEQPE 119 (203)
T ss_dssp ETHH--HHHHHHHHHHSTT
T ss_pred ECCH--HHHHHHHHHHHHH
T ss_conf 5588--8999999986420
No 167
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]}
Probab=28.82 E-value=12 Score=13.54 Aligned_cols=97 Identities=9% Similarity=0.079 Sum_probs=64.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEE
Q ss_conf 87999999999997799799994078861528999999999769947998078743366889789887420268689996
Q gi|254780901|r 77 DCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITV 156 (600)
Q Consensus 77 dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItv 156 (600)
.|..-.++|...+++..-|-|.---| ..-+.=+.++|..-|.++.- |+-|-.+ ..++|+.+.++-++++|-+
T Consensus 2 ~~~~~~~~i~~~l~~~~iipvl~~~~---~~~a~~~~~al~~~Gi~~iE-itl~~p~----a~~~i~~l~~~~p~~~vGa 73 (216)
T d1mxsa_ 2 SMADKAARIDAICEKARILPVITIAR---EEDILPLADALAAGGIRTLE-VTLRSQH----GLKAIQVLREQRPELCVGA 73 (216)
T ss_dssp CHHHHHHHHHHHHHHHSEEEEECCSC---GGGHHHHHHHHHHTTCCEEE-EESSSTH----HHHHHHHHHHHCTTSEEEE
T ss_pred CHHHHHHHHHHHHHHCCEEEEEECCC---HHHHHHHHHHHHHCCCCEEE-EECCCHH----HHHHHHHHHHHCCCCCEEE
T ss_conf 77778999999998699799997899---99999999999987998899-9679806----9999999998489752311
Q ss_pred CCCC-CCHHHHHHHHHCCCCEEEECCCC
Q ss_conf 4887-62345555541798279961544
Q gi|254780901|r 157 DCGS-TSYDALQYATNQGIDVIVIDHHQ 183 (600)
Q Consensus 157 D~Gi-~~~e~i~~a~~~GidvIVtDHH~ 183 (600)
|+ .+.++++.+.+.|.+.+|+=|-.
T Consensus 74 --GTV~~~~~~~~a~~aGa~FivsP~~~ 99 (216)
T d1mxsa_ 74 --GTVLDRSMFAAVEAAGAQFVVTPGIT 99 (216)
T ss_dssp --ECCCSHHHHHHHHHHTCSSEECSSCC
T ss_pred --EEEECHHHHHHHHHCCCCEEECCCCC
T ss_conf --00120888999986799899789984
No 168
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.79 E-value=12 Score=13.53 Aligned_cols=18 Identities=22% Similarity=0.089 Sum_probs=12.1
Q ss_pred HCCCHHHHHHHHHHHHHC
Q ss_conf 614879999999999977
Q gi|254780901|r 74 ILTDCDKAARRIVQAIYN 91 (600)
Q Consensus 74 ~l~dm~~A~~ri~~ai~~ 91 (600)
.-++..+|.+.|.+.+++
T Consensus 48 Gs~g~~~a~~~i~~~~~~ 65 (329)
T d2afwa1 48 GSPGSYAARQHIMQRIQR 65 (329)
T ss_dssp TSHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHH
T ss_conf 897999999999999998
No 169
>d1vkya_ e.53.1.1 (A:) Queuosine biosynthesis protein queA {Thermotoga maritima [TaxId: 2336]}
Probab=28.63 E-value=12 Score=13.51 Aligned_cols=12 Identities=25% Similarity=0.313 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHH
Q ss_conf 222789988420
Q gi|254780901|r 384 GLLAARLKEKFG 395 (600)
Q Consensus 384 GIVAsrL~e~y~ 395 (600)
|--+-|..|...
T Consensus 245 GTT~~R~LEs~~ 256 (332)
T d1vkya_ 245 GTTTVRTLETIA 256 (332)
T ss_dssp SHHHHHHHHHHT
T ss_pred EHHHHHHHHHHH
T ss_conf 468999999999
No 170
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=28.29 E-value=13 Score=13.47 Aligned_cols=132 Identities=16% Similarity=0.146 Sum_probs=63.2
Q ss_pred CCCCHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCCCH
Q ss_conf 19667771899556148799999999999779979999407886152899999999976-99479980787433668897
Q gi|254780901|r 61 LNPSIRLLMPDPLILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHC-SVNANMYIPDRIVDGYGPNP 139 (600)
Q Consensus 61 L~p~l~~l~~dP~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~-g~~v~~~IP~R~~eGYGl~~ 139 (600)
+.|++-.. | +.++++.++++.++--.-=.|=|.=-.=|.-+|-.--..+.++.. ...+..|+=- .+ ..
T Consensus 13 IspSIl~~--d---~~~l~~~i~~l~~~g~d~iHiDImDG~Fvpn~t~~~~~v~~i~~~t~~~~dvHLMv--~~----P~ 81 (230)
T d1rpxa_ 13 VSPSILSA--N---FSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMI--VE----PD 81 (230)
T ss_dssp EEEBGGGS--C---GGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEES--SS----HH
T ss_pred EECCHHHC--C---HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEE--CC----HH
T ss_conf 98014204--9---89999999999974999899967469717765528578766553357506453332--20----66
Q ss_pred HHHHHHHHCCCCEEEE-ECCCCC-C-HHHHHHHHHCCCCEEE-ECCCCCCCCCC----CCEEE----ECCCCCCCC
Q ss_conf 8988742026868999-648876-2-3455555417982799-61544765556----72565----237888864
Q gi|254780901|r 140 SLMEKFINEGAQLIIT-VDCGST-S-YDALQYATNQGIDVIV-IDHHQVKSEEI----PAYAL----VNPNRLDDL 203 (600)
Q Consensus 140 ~~i~~~~~~g~~LiIt-vD~Gi~-~-~e~i~~a~~~GidvIV-tDHH~~~~~~p----~a~ai----vNP~~~~~~ 203 (600)
..++++.+.|++.|+. +.+..+ . .+-+.++++.|+.+-+ +...++.+.+- ..+.| |||-..|-.
T Consensus 82 ~~i~~~~~~g~~~i~~H~E~~~~~~~~~~i~~ik~~g~k~Gialnp~T~~~~l~~~l~~vD~VllM~V~PGf~GQ~ 157 (230)
T d1rpxa_ 82 QRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQS 157 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCC
T ss_pred HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEEECCCCCCCH
T ss_conf 6678875325622577322235305999999999869859999679998799999996579899987368864200
No 171
>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}
Probab=28.07 E-value=13 Score=13.44 Aligned_cols=18 Identities=39% Similarity=0.449 Sum_probs=8.8
Q ss_pred CCHHHHHHHHHCCCCEEE
Q ss_conf 623455555417982799
Q gi|254780901|r 161 TSYDALQYATNQGIDVIV 178 (600)
Q Consensus 161 ~~~e~i~~a~~~GidvIV 178 (600)
.+.+++-.|-+.||++||
T Consensus 76 ~a~dAi~EAi~agI~liv 93 (121)
T d1oi7a1 76 AAADAALEAAHAGIPLIV 93 (121)
T ss_dssp HHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHCCCCEEE
T ss_conf 889999999867996899
No 172
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=27.56 E-value=13 Score=13.38 Aligned_cols=65 Identities=17% Similarity=0.291 Sum_probs=43.3
Q ss_pred HHHHHHH--HCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCH----HHHHHHHHCCCCEEEEE
Q ss_conf 9999999--77997999940788615289999999997699479980787433668897----89887420268689996
Q gi|254780901|r 83 RRIVQAI--YNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNP----SLMEKFINEGAQLIITV 156 (600)
Q Consensus 83 ~ri~~ai--~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~----~~i~~~~~~g~~LiItv 156 (600)
+.|.+.+ ..++++.|| |.-...+--|+..|+..|..+..+-. |++. ..++.+.....+.+|+.
T Consensus 19 ~~L~~~l~~~~~~~~IIF----~~t~~~~~~l~~~l~~~~~~~~~~h~-------~~~~~~r~~~~~~f~~g~~~ilvaT 87 (200)
T d1oywa3 19 DQLMRYVQEQRGKSGIIY----CNSRAKVEDTAARLQSKGISAAAYHA-------GLENNVRADVQEKFQRDDLQIVVAT 87 (200)
T ss_dssp HHHHHHHHHTTTCCEEEE----CSSHHHHHHHHHHHHHTTCCEEEECT-------TSCHHHHHHHHHHHHTTSCSEEEEC
T ss_pred HHHHHHHHHCCCCCEEEE----EEEEHHHHHHHHHHCCCCCEEEEECC-------CCCHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 999999985699988999----82231167764432447853577538-------8717778999988741343078740
Q ss_pred CC
Q ss_conf 48
Q gi|254780901|r 157 DC 158 (600)
Q Consensus 157 D~ 158 (600)
|.
T Consensus 88 d~ 89 (200)
T d1oywa3 88 VA 89 (200)
T ss_dssp TT
T ss_pred CH
T ss_conf 23
No 173
>d1eo1a_ c.55.5.1 (A:) Hypothetical protein MTH1175 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=27.56 E-value=13 Score=13.38 Aligned_cols=45 Identities=18% Similarity=0.268 Sum_probs=31.6
Q ss_pred CCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCC
Q ss_conf 688978988742026868999648876234555554179827996154
Q gi|254780901|r 135 YGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHH 182 (600)
Q Consensus 135 YGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH 182 (600)
.|-.....+.+.+.+++.+|+--.|- .+...+++.||+|+.++.=
T Consensus 51 ~~~~~~~~~~l~~~~vd~vi~~~iG~---~~~~~L~~~GI~v~~~~~~ 95 (124)
T d1eo1a_ 51 GGAGIRTAQIIANNGVKAVIASSPGP---NAFEVLNELGIKIYRATGT 95 (124)
T ss_dssp SSCSTTHHHHHHHTTCCEEEECCSSH---HHHHHHHHHTCEEEECCSC
T ss_pred CCCHHHHHHHHHHCCCCEEEECCCCH---HHHHHHHHCCCEEEECCCC
T ss_conf 65127899999987998999898798---8999999879999985997
No 174
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]}
Probab=27.37 E-value=12 Score=13.54 Aligned_cols=22 Identities=14% Similarity=0.241 Sum_probs=17.3
Q ss_pred HHHHHHHCCCCEEEECCCCCCC
Q ss_conf 5555541798279961544765
Q gi|254780901|r 165 ALQYATNQGIDVIVIDHHQVKS 186 (600)
Q Consensus 165 ~i~~a~~~GidvIVtDHH~~~~ 186 (600)
.|+.|.++||.|||.=||.|..
T Consensus 66 ~v~~~~~~gi~vildlH~~pg~ 87 (325)
T d1vjza_ 66 VIFWGEKYGIHICISLHRAPGY 87 (325)
T ss_dssp HHHHHHHHTCEEEEEEEEETTE
T ss_pred HHHHHHHCCCCEEEEECCCCCC
T ss_conf 9999997599579852136533
No 175
>d1t9ba2 c.36.1.5 (A:89-263) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.24 E-value=13 Score=13.34 Aligned_cols=119 Identities=14% Similarity=0.074 Sum_probs=56.7
Q ss_pred HHHHCCHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCH
Q ss_conf 77430623331212222100203425899999999998999999999999999999987521124347502620578581
Q gi|254780901|r 301 IGPSINAGGRIGESNLGSRLLISDDSQELEMLAMKLDVLNQNRRLMESAMLEQAEAKVLTQCDDIQQASVIVVEGDRWHP 380 (600)
Q Consensus 301 iaPrINAaGRl~~a~~av~lL~~~d~~~a~~la~~L~~lN~~Rk~~e~~i~~~a~~~~~~~~~~~~~~~~ivv~~~~wh~ 380 (600)
..|.++|..+- ..+++..+.++..|.-.|.- -.++ ...+.+++... -+
T Consensus 30 ~~~l~~al~~~----~~~~~i~~~~E~~A~~~A~g-------------------yar~-------tg~~~v~~~t~--Gp 77 (175)
T d1t9ba2 30 ILPVYDAIHNS----DKFNFVLPKHEQGAGHMAEG-------------------YARA-------SGKPGVVLVTS--GP 77 (175)
T ss_dssp GHHHHHHTTTC----SSSEEECCSSHHHHHHHHHH-------------------HHHH-------HSSCEEEEECS--TH
T ss_pred HHHHHHHHHHC----CCCEEEEECCCHHHHHHHHH-------------------HHHH-------HCCCEEEEEEC--CC
T ss_conf 89999998524----56517975375268899988-------------------8998-------59941899836--92
Q ss_pred HHHHHHHHHHH-HHHHCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHH
Q ss_conf 22222278998-84201079988637983799986489861888888530335301156532223146422215889999
Q gi|254780901|r 381 GIVGLLAARLK-EKFGRPSFAISFEEDGKGIGSGRSIEGFDIGKMVSFAVEEGILVKGGGHAMAAGLTVERVNFGRLCDF 459 (600)
Q Consensus 381 GViGIVAsrL~-e~y~kP~iv~s~~~dg~~kGS~RSi~g~~l~~~l~~~~~~~ll~~~GGH~~AaG~ti~~~~l~~f~~~ 459 (600)
|+.-.+.+=.. ..-+.|+++++-...-...|.. ....+|...+.+.+ .+ .+-.....+.+.+.
T Consensus 78 G~~n~~~gl~~A~~~~~Pvl~i~g~~~~~~~~~~-~~q~~d~~~l~~~~------tk---------~~~~v~~~~~~~~~ 141 (175)
T d1t9ba2 78 GATNVVTPMADAFADGIPMVVFTGQVPTSAIGTD-AFQEADVVGISRSC------TK---------WNVMVKSVEELPLR 141 (175)
T ss_dssp HHHTTHHHHHHHHHHTCCEEEEEEECCTTTTTSC-CTTCCCHHHHTGGG------SS---------EEEECCSGGGHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCC-CCCCCCHHHHCCCC------EE---------EEEECCCHHHHHHH
T ss_conf 7887899999999839977999568876651788-65441676740465------45---------55742899999999
Q ss_pred HHHHHHHH
Q ss_conf 99999862
Q gi|254780901|r 460 FQKFAHNI 467 (600)
Q Consensus 460 l~~~~~~~ 467 (600)
+.+.+...
T Consensus 142 l~~A~~~a 149 (175)
T d1t9ba2 142 INEAFEIA 149 (175)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 176
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=27.06 E-value=13 Score=13.31 Aligned_cols=55 Identities=7% Similarity=0.211 Sum_probs=24.1
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 997999940788615289999999997699479980787433668897898874202686899964887
Q gi|254780901|r 92 SEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGS 160 (600)
Q Consensus 92 ~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi 160 (600)
+.+|+|.-| =-+...++...|+..|.+|... .. ..++++.+.+..++++| +|..-
T Consensus 3 k~~ILIVDD----d~~~~~~l~~~L~~~g~~v~~a-----~~----~~~a~~~l~~~~~dlii-~D~~m 57 (123)
T d1krwa_ 3 RGIVWVVDD----DSSIRWVLERALAGAGLTCTTF-----EN----GNEVLAALASKTPDVLL-SDIRM 57 (123)
T ss_dssp CCEEEEESS----SHHHHHHHHHHHHHTTCEEEEE-----SS----SHHHHHHHTTCCCSEEE-ECCSS
T ss_pred CCEEEEEEC----CHHHHHHHHHHHHHCCCEEEEE-----CC----HHHHHHHHHHCCCCEEE-EHHHC
T ss_conf 898999989----9999999999999779989995-----88----89999999827887998-65423
No 177
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=26.33 E-value=13 Score=13.22 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=27.1
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCC
Q ss_conf 9799994078861528999999999769947998078743366889789887420268689996488
Q gi|254780901|r 93 EKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCG 159 (600)
Q Consensus 93 ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~G 159 (600)
+||+|.- |--+...++...|+..|.+|... .+ -.++++.+.+..++++| +|..
T Consensus 1 KkILiVD----D~~~~~~~l~~~L~~~g~~v~~a-----~~----~~~al~~l~~~~~dlil-~D~~ 53 (121)
T d1zesa1 1 RRILVVE----DEAPIREMVCFVLEQNGFQPVEA-----ED----YDSAVNQLNEPWPDLIL-LDWM 53 (121)
T ss_dssp CEEEEEC----SCHHHHHHHHHHHHHTTCEEEEE-----CS----HHHHHHHSSSSCCSEEE-ECSS
T ss_pred CEEEEEE----CCHHHHHHHHHHHHHCCCEEEEE-----CC----HHHHHHHHHCCCCCEEE-EECC
T ss_conf 9899996----89999999999999879999998-----78----59999999715887897-4057
No 178
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]}
Probab=25.93 E-value=14 Score=13.17 Aligned_cols=101 Identities=15% Similarity=0.330 Sum_probs=59.4
Q ss_pred HHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE-ECCCCCCCCCCC-HHHHHHHHH-CC
Q ss_conf 561487999999999997799799994078861528999999999769947998-078743366889-789887420-26
Q gi|254780901|r 73 LILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMY-IPDRIVDGYGPN-PSLMEKFIN-EG 149 (600)
Q Consensus 73 ~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~-IP~R~~eGYGl~-~~~i~~~~~-~g 149 (600)
..+..++.-+-.+..+.+++.+++|+.+ |+||-.=++++.+-++ -+.+|... .| |||-. .+.+++++- .|
T Consensus 42 ~kI~~~~~i~p~Le~~~~~~~pLlIIA~-di~~~aL~~Lv~N~~k-g~l~v~aVkaP-----gfG~~r~~~LeDlA~~TG 114 (193)
T d1kida_ 42 KKISNIREMLPVLEAVAKAGKPLLIIAE-DVEGEALATLVVNTMR-GIVKVAAVKAP-----GFGDRRKAMLQDIATLTG 114 (193)
T ss_dssp SEECCHHHHHHHHHHHHHHTCCEEEEES-EECHHHHHHHHHHHHT-TSCCEEEEECC-----SCHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEEC-CCCHHHHHHHHHHHHC-CCCCEEECCCC-----CCCHHHHHHHHHHHHHCC
T ss_conf 8755388899999999863995799935-2137899999986641-67431102487-----767269999999998709
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCC--CEEEECCCC
Q ss_conf 8689996488762345555541798--279961544
Q gi|254780901|r 150 AQLIITVDCGSTSYDALQYATNQGI--DVIVIDHHQ 183 (600)
Q Consensus 150 ~~LiItvD~Gi~~~e~i~~a~~~Gi--dvIVtDHH~ 183 (600)
. -+|+-+.|.. .+.+. ...+|- .|+|+.++.
T Consensus 115 a-~vi~~~~g~~-l~~~~-~~~LG~~~kv~itk~~T 147 (193)
T d1kida_ 115 G-TVISEEIGME-LEKAT-LEDLGQAKRVVINKDTT 147 (193)
T ss_dssp C-CCBCGGGTCC-GGGCC-GGGCEEEEEEEECSSCE
T ss_pred C-EEECHHCCCC-CCCCC-HHHCCCCCEEEEECCCE
T ss_conf 9-9864102665-35488-86757022899806863
No 179
>d1zcza2 c.97.1.4 (A:158-452) AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]}
Probab=25.18 E-value=14 Score=13.07 Aligned_cols=22 Identities=18% Similarity=0.162 Sum_probs=11.0
Q ss_pred CCEEECCCCHHHHHHHHHHHHH
Q ss_conf 3146422215889999999998
Q gi|254780901|r 444 AGLTVERVNFGRLCDFFQKFAH 465 (600)
Q Consensus 444 aG~ti~~~~l~~f~~~l~~~~~ 465 (600)
-|..+..|-+--|.+-++..++
T Consensus 235 ~g~v~aSDAFFPF~D~i~~a~~ 256 (295)
T d1zcza2 235 KGAVAASDAFFPFPDSLEILAQ 256 (295)
T ss_dssp TTCEEEESSCCSSHHHHHHHHH
T ss_pred CCCEEECCCCCCCCHHHHHHHH
T ss_conf 4827972457688568999998
No 180
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]}
Probab=25.16 E-value=9.3 Score=14.49 Aligned_cols=45 Identities=24% Similarity=0.352 Sum_probs=31.1
Q ss_pred HHHHHCC-CCHHHCCCCHHHCCCHHHHHHHHHHHHH----CCCCEEEEEC
Q ss_conf 9886619-6677718995561487999999999997----7997999940
Q gi|254780901|r 56 YAKDFLN-PSIRLLMPDPLILTDCDKAARRIVQAIY----NSEKIMIFGD 100 (600)
Q Consensus 56 ~~~~fL~-p~l~~l~~dP~~l~dm~~A~~ri~~ai~----~~ekI~I~gD 100 (600)
-+-.||. +++....+.=+.|.|+-.|.+++.+-|. +-++|+|+|.
T Consensus 138 g~~GFl~~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~ 187 (483)
T d1qe3a_ 138 GPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGE 187 (483)
T ss_dssp HHHHSCCCTTTCTTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEE
T ss_pred CCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECC
T ss_conf 41331563322212355114478999999999879973998443411001
No 181
>d2r25b1 c.23.1.1 (B:1087-1214) Response regulator Sin1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.12 E-value=14 Score=13.06 Aligned_cols=21 Identities=14% Similarity=0.335 Sum_probs=10.9
Q ss_pred CCEEECCCCHHHHHHHHHHHH
Q ss_conf 314642221588999999999
Q gi|254780901|r 444 AGLTVERVNFGRLCDFFQKFA 464 (600)
Q Consensus 444 aG~ti~~~~l~~f~~~l~~~~ 464 (600)
.||-.|+-+.+.|.+.+.+++
T Consensus 104 ~~~l~KP~~~~~L~~~l~~~~ 124 (128)
T d2r25b1 104 NGFLSKPIKRPKLKTILTEFC 124 (128)
T ss_dssp SEEEESSCCHHHHHHHHHHHC
T ss_pred CEEEECCCCHHHHHHHHHHHH
T ss_conf 899989899999999999999
No 182
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]}
Probab=25.08 E-value=14 Score=13.06 Aligned_cols=100 Identities=18% Similarity=0.322 Sum_probs=50.9
Q ss_pred HCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEE-EECCCCCCCCCCCH-HHHHHHHHC-CC
Q ss_conf 6148799999999999779979999407886152899999999976994799-80787433668897-898874202-68
Q gi|254780901|r 74 ILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANM-YIPDRIVDGYGPNP-SLMEKFINE-GA 150 (600)
Q Consensus 74 ~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~-~IP~R~~eGYGl~~-~~i~~~~~~-g~ 150 (600)
.+..++.-.-.+..+.+++.+.+|+.+ |++|-.=+.++.+-++. +.+|.. ..| |||-.. +.+++++-- |
T Consensus 36 kI~~~~~i~p~Le~~~~~~~PLlIIA~-di~~~aL~~Lv~N~~~g-~l~v~aVkaP-----~fG~~r~~~LeDlA~~tG- 107 (176)
T d1ioka2 36 KLSSLQPMVPLLESVIQSQKPLLIVAE-DVEGEALATLVVNKLRG-GLKIAAVKAP-----GFGDRRKAMLQDIAILTG- 107 (176)
T ss_dssp CBCCCCC-----------CCCCEEEES-CBC------------------CEEEECS-----CCTTHHHHHHHHHHHHHT-
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEC-CCCHHHHHHHHHHHHCC-CCEEEEEECC-----CCCCHHHHHHHHHHHHHC-
T ss_conf 447488899999999964994899965-77778999999998618-8359999699-----987078999999888619-
Q ss_pred CEEEEECCCCCCHHHHHHHHHCCC--CEEEECCCC
Q ss_conf 689996488762345555541798--279961544
Q gi|254780901|r 151 QLIITVDCGSTSYDALQYATNQGI--DVIVIDHHQ 183 (600)
Q Consensus 151 ~LiItvD~Gi~~~e~i~~a~~~Gi--dvIVtDHH~ 183 (600)
.-+|.-|.|.+ .+.+.. ..+|- .|+||-++.
T Consensus 108 a~vi~~~~g~~-l~~~~~-~~LG~a~kv~vtk~~T 140 (176)
T d1ioka2 108 GQVISEDLGMK-LENVTI-DMLGRAKKVSINKDNT 140 (176)
T ss_dssp C----------------C-TTSEEEEEEEECSSCE
T ss_pred CEEEECCCCCC-HHHCCH-HHCCEEEEEEEECCCE
T ss_conf 98971335887-423989-7976500899946955
No 183
>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine phosphoribosyltransferase PH0095 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=24.76 E-value=14 Score=13.01 Aligned_cols=100 Identities=12% Similarity=0.068 Sum_probs=50.3
Q ss_pred HCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE-ECCC--CCCCCCCCHHHHH-HHHHCC
Q ss_conf 61487999999999997799799994078861528999999999769947998-0787--4336688978988-742026
Q gi|254780901|r 74 ILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMY-IPDR--IVDGYGPNPSLME-KFINEG 149 (600)
Q Consensus 74 ~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~-IP~R--~~eGYGl~~~~i~-~~~~~g 149 (600)
.+.++++++.+|...|.+.+.-.|.|= ..=|+.=+..|.+.|... .+.+. +-++ .+++.+...-... ...-.|
T Consensus 7 s~~~i~~~i~~la~~i~~~~~d~IVgI-~~gG~~~A~~la~~L~~~--~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~g 83 (153)
T d1vdma1 7 TWWQVDRAIFALAEKLREYKPDVIIGV-ARGGLIPAVRLSHILGDI--PLKVIDVKFYKGIDERGEKPVITIPIHGDLKD 83 (153)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSEEEEE-TTTTHHHHHHHHHHTTSC--CEEEEEEECCCC--CCCSSCEEEECCCSCCBT
T ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEEE-CCCCCHHHHHHHHHHCCC--CEEEEEEEECCCCCCCCCCCEEECCCCCCCCC
T ss_conf 899999999999999872499999997-778331499988875778--65788775014443457751130015545689
Q ss_pred CCEEE---EECCCCCCHHHHHHHHHCCCCE
Q ss_conf 86899---9648876234555554179827
Q gi|254780901|r 150 AQLII---TVDCGSTSYDALQYATNQGIDV 176 (600)
Q Consensus 150 ~~LiI---tvD~Gi~~~e~i~~a~~~Gidv 176 (600)
-+++| .+|.|.|....++.+++.|...
T Consensus 84 k~VLIVDDii~TG~Tl~~~~~~l~~~g~~~ 113 (153)
T d1vdma1 84 KRVVIVDDVSDTGKTLEVVIEEVKKLGAKE 113 (153)
T ss_dssp CEEEEEEEEESSCHHHHHHHHHHHTTTBSE
T ss_pred CEEEEEEEEECCCCCHHHHHHHHHHCCCCE
T ss_conf 989999601446874899998777409852
No 184
>d1n2za_ c.92.2.2 (A:) Vitamin B12 binding protein BtuF {Escherichia coli [TaxId: 562]}
Probab=24.59 E-value=14 Score=12.99 Aligned_cols=38 Identities=21% Similarity=0.386 Sum_probs=19.4
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf 887420268689996488762345555541798279961
Q gi|254780901|r 142 MEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVID 180 (600)
Q Consensus 142 i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtD 180 (600)
+|++.+-.++|||+...+ ...+.++.+.+.|+.|+++|
T Consensus 50 ~E~i~~l~PDlii~~~~~-~~~~~~~~l~~~~i~v~~~~ 87 (245)
T d1n2za_ 50 LERIVALKPDLVIAWRGG-NAERQVDQLASLGIKVMWVD 87 (245)
T ss_dssp HHHHHHTCCSEEEECTTT-SCHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHCCCCEEEEECCC-CCHHHHHHHHHCCCCEEEEC
T ss_conf 999820598079986587-70889998751255313103
No 185
>d1gdha2 c.23.12.1 (A:2-100,A:292-321) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}
Probab=24.59 E-value=14 Score=12.99 Aligned_cols=66 Identities=20% Similarity=0.178 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEE
Q ss_conf 861528999999999769947998078743366889789887420268689996488762345555541798279
Q gi|254780901|r 103 VDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVI 177 (600)
Q Consensus 103 ~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvI 177 (600)
.|...+..-+.+.++ +++.- |+ .-+..++.+.++.+.+ ..++|.+.--|..+.+ +++|+++||.|.
T Consensus 29 ~~~~~s~~el~~~~~--~~d~i--i~---~~~~~i~~~~l~~~~~-~LK~I~~~gvG~d~ID-~~~a~~~gI~V~ 94 (129)
T d1gdha2 29 DDPKITIDEMIETAK--SVDAL--LI---TLNEKCRKEVIDRIPE-NIKCISTYSIGFDHID-LDACKARGIKVG 94 (129)
T ss_dssp STTCCCHHHHHHHHT--TCSEE--EE---ETTSCBCHHHHHHSCT-TCCEEEEESSCCTTBC-HHHHHHTTCEEE
T ss_pred CCCCCCHHHHHHHHC--CCCEE--EE---CCCCHHHHHHHHHHHH-CCEEEEECCCCCCCCC-HHHHHHCCCEEE
T ss_conf 999999999999856--99899--98---3873144677756500-1005555156986436-999986999899
No 186
>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=24.28 E-value=15 Score=12.95 Aligned_cols=44 Identities=14% Similarity=0.185 Sum_probs=33.2
Q ss_pred HHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCEEEEEEEC
Q ss_conf 521124347502620578581222222789988420107998863
Q gi|254780901|r 360 TQCDDIQQASVIVVEGDRWHPGIVGLLAARLKEKFGRPSFAISFE 404 (600)
Q Consensus 360 ~~~~~~~~~~~ivv~~~~wh~GViGIVAsrL~e~y~kP~iv~s~~ 404 (600)
+...+....+++|+.+++ +-|==|++++|....++..|.++...
T Consensus 33 ~~~~~~~~~~vlvl~G~G-NNGGDGl~~Ar~L~~~g~~V~v~~~~ 76 (211)
T d2ax3a2 33 EELGNLSDYRFLVLCGGG-NNGGDGFVVARNLLGVVKDVLVVFLG 76 (211)
T ss_dssp HHHSCCTTCEEEEEECSS-HHHHHHHHHHHHHTTTSSEEEEEECC
T ss_pred HHCCCCCCCCEEEEECCC-CCCHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 965424688579998789-88522899999998569816998457
No 187
>d1ddza2 c.53.2.1 (A:326-564) beta-carbonic anhydrase {Red alga (Porphyridium purpureum) [TaxId: 35688]}
Probab=24.10 E-value=13 Score=13.43 Aligned_cols=21 Identities=29% Similarity=0.387 Sum_probs=11.5
Q ss_pred HHHHHHH-HHCCCCEEEECCCC
Q ss_conf 3455555-41798279961544
Q gi|254780901|r 163 YDALQYA-TNQGIDVIVIDHHQ 183 (600)
Q Consensus 163 ~e~i~~a-~~~GidvIVtDHH~ 183 (600)
...++|| ..+|+..||.=+|.
T Consensus 114 ~~sleyAv~~L~v~~IvV~GHt 135 (239)
T d1ddza2 114 LSVLQYAVQYLKVKRVVVCGHY 135 (239)
T ss_dssp HHHHHHHHHTSCCSEEEEEEET
T ss_pred HHHHHHHHEECCCCEEEEECCC
T ss_conf 5333434221675279984575
No 188
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]}
Probab=24.01 E-value=15 Score=12.91 Aligned_cols=25 Identities=16% Similarity=0.222 Sum_probs=12.4
Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf 2345555541798279961544765
Q gi|254780901|r 162 SYDALQYATNQGIDVIVIDHHQVKS 186 (600)
Q Consensus 162 ~~e~i~~a~~~GidvIVtDHH~~~~ 186 (600)
..++++.+++...|++++|-+.|..
T Consensus 37 ~~~al~~~~~~~~DlvllD~~mP~~ 61 (138)
T d1a04a2 37 GEQGIELAESLDPDLILLDLNMPGM 61 (138)
T ss_dssp HHHHHHHHHHHCCSEEEEETTSTTS
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 9999999985699799986578999
No 189
>d2c42a1 c.36.1.8 (A:2-258) Pyruvate-ferredoxin oxidoreductase, PFOR, domain I {Desulfovibrio africanus [TaxId: 873]}
Probab=24.01 E-value=15 Score=12.91 Aligned_cols=20 Identities=15% Similarity=-0.039 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHCEEEEEEE
Q ss_conf 22278998842010799886
Q gi|254780901|r 384 GLLAARLKEKFGRPSFAISF 403 (600)
Q Consensus 384 GIVAsrL~e~y~kP~iv~s~ 403 (600)
.+.|-+|+|+|+.||+++.+
T Consensus 152 ~~~A~~lae~~~~Pv~~~~D 171 (257)
T d2c42a1 152 ALVAHLAAIESNVPFMHFFD 171 (257)
T ss_dssp HHHHHHHHHHHCCCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEC
T ss_conf 99999999984878799845
No 190
>d2ae9a1 a.237.1.1 (A:1-76) Theta subunit of DNA polymerase III {Escherichia coli [TaxId: 562]}
Probab=24.00 E-value=12 Score=13.48 Aligned_cols=12 Identities=50% Similarity=0.614 Sum_probs=8.7
Q ss_pred CCCHHHHHHHHH
Q ss_conf 443047889999
Q gi|254780901|r 206 QGHLCAAGVVFL 217 (600)
Q Consensus 206 ~~~l~gaGvaf~ 217 (600)
+-+|+++||||+
T Consensus 17 nVDLaAsgVa~k 28 (76)
T d2ae9a1 17 NVDLAAAGVAFK 28 (76)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 688998676999
No 191
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]}
Probab=23.87 E-value=15 Score=12.89 Aligned_cols=66 Identities=23% Similarity=0.374 Sum_probs=35.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHC---CC----CEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 9979999407886152899999999976---99----47998078743366889789887420268689996488762
Q gi|254780901|r 92 SEKIMIFGDYDVDGAASVALMMRFLSHC---SV----NANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTS 162 (600)
Q Consensus 92 ~ekI~I~gDyD~DGitstail~~~L~~~---g~----~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~ 162 (600)
+.+|++.++.|.|--.++++|.++++.+ +. ++.+..-...+-|.|=.. .....++-.|.+|.+...
T Consensus 59 ~~~i~~~aH~Dt~dk~g~a~~l~~~~~l~~~~~~~~~~i~~~ft~~EE~G~~Ga~-----~~~~~~~~~iavD~~~~~ 131 (233)
T d2grea2 59 AQHRLLTAHVDTLDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNS-----NIPEETVEYLAVDMGALG 131 (233)
T ss_dssp EEEEEEEEECCBCTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCC-----CCCTTEEEEEEECCCCCS
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHH-----HHCCCCCCCEEEEECCCC
T ss_conf 4417988415755558699999999999977999884599999807433760677-----522388510799966578
No 192
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.79 E-value=15 Score=12.88 Aligned_cols=73 Identities=10% Similarity=0.147 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCC
Q ss_conf 99999999997799799994078861528999999999769947998078743366889789887420268689996488
Q gi|254780901|r 80 KAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCG 159 (600)
Q Consensus 80 ~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~G 159 (600)
.+...+.+.. +.+++.|| |.-...+-.+++.|+..|.++.++-.+.-.+ -....++.+.....+.+|+.|.+
T Consensus 16 ~~L~~ll~~~-~~~k~iIF----~~~~~~~~~l~~~L~~~~~~~~~ihg~~~~~---~r~~~l~~F~~g~~~iLv~T~~~ 87 (168)
T d1t5ia_ 16 RKLFDLLDVL-EFNQVVIF----VKSVQRCIALAQLLVEQNFPAIAIHRGMPQE---ERLSRYQQFKDFQRRILVATNLF 87 (168)
T ss_dssp HHHHHHHHHS-CCSSEEEE----CSSHHHHHHHHHHHHHTTCCEEEECTTSCHH---HHHHHHHHHHTTSCSEEEESSCC
T ss_pred HHHHHHHHHC-CCCEEEEE----EEEEECCHHHHHHHCCCCCCCCCCCCCCCHH---HHHHHHHHHCCCCCEEEECCCCC
T ss_conf 9999999838-99819999----8034411013334301244432111222102---22211221112221144123301
Q ss_pred C
Q ss_conf 7
Q gi|254780901|r 160 S 160 (600)
Q Consensus 160 i 160 (600)
.
T Consensus 88 ~ 88 (168)
T d1t5ia_ 88 G 88 (168)
T ss_dssp S
T ss_pred C
T ss_conf 1
No 193
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.68 E-value=15 Score=12.87 Aligned_cols=62 Identities=10% Similarity=0.192 Sum_probs=42.6
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCC
Q ss_conf 799799994078861528999999999769947998078743366889789887420268689996488
Q gi|254780901|r 91 NSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCG 159 (600)
Q Consensus 91 ~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~G 159 (600)
..+++.|| |.-...+-.++..|+..|..+.++-.+ ... ---..+++++.+...+++|+.|.+
T Consensus 31 ~~~k~iVF----~~~~~~~~~l~~~L~~~g~~~~~~h~~-~~~--~~r~~~~~~f~~~~~~ilv~Td~~ 92 (171)
T d1s2ma2 31 QINQAIIF----CNSTNRVELLAKKITDLGYSCYYSHAR-MKQ--QERNKVFHEFRQGKVRTLVCSDLL 92 (171)
T ss_dssp CCSEEEEE----CSSHHHHHHHHHHHHHHTCCEEEECTT-SCH--HHHHHHHHHHHTTSSSEEEESSCS
T ss_pred CCCCEEEE----EEEEEHHHHHHHHHHCCCCCCCCCCCC-CCH--HHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf 98765999----722413567677650133443334333-211--456655321136863110120176
No 194
>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=23.57 E-value=15 Score=12.85 Aligned_cols=137 Identities=12% Similarity=0.162 Sum_probs=73.0
Q ss_pred HHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
Q ss_conf 99999881999999999996788978988661966777189955614879999999999977997999940788615289
Q gi|254780901|r 30 ALAITQKHAIPDIVARVLVNRNVSIDYAKDFLNPSIRLLMPDPLILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASV 109 (600)
Q Consensus 30 ~~~l~~~~~~~~~~a~iL~~Rgi~~~~~~~fL~p~l~~l~~dP~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitst 109 (600)
........+...++.+++...+...+....+..-........+..++++.+..+.+. +++-+++|....+- .
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~---~~g~~~~v~Sn~~~-----~ 110 (204)
T d2go7a1 39 VREFIFKYSVQDLLVRVAEDRNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWAD---ESGIQQFIYTHKGN-----N 110 (204)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHTCCHHHHHHHHHHHHTTCGGGCEECTTHHHHHHHHH---HTTCEEEEECSSCT-----H
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC---CCCCCHHHHCCCCH-----H
T ss_conf 998614553223222232000116999999999888763036745634776542110---22220022113510-----3
Q ss_pred HHHHHHHHHCCCC--EEEEECCCCCCCC-CCCHHHHHHHHHC-CC--CEEEEECCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf 9999999976994--7998078743366-8897898874202-68--689996488762345555541798279961
Q gi|254780901|r 110 ALMMRFLSHCSVN--ANMYIPDRIVDGY-GPNPSLMEKFINE-GA--QLIITVDCGSTSYDALQYATNQGIDVIVID 180 (600)
Q Consensus 110 ail~~~L~~~g~~--v~~~IP~R~~eGY-Gl~~~~i~~~~~~-g~--~LiItvD~Gi~~~e~i~~a~~~GidvIVtD 180 (600)
. ...|+.+|.. +...+... ..++ =.+++.++.+.+. |+ +=.+.|+-..+ -+..|+..|+..|-..
T Consensus 111 -~-~~~l~~~gl~~~f~~i~~s~-~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~---Di~~A~~~G~~~i~v~ 181 (204)
T d2go7a1 111 -A-FTILKDLGVESYFTEILTSQ-SGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTL---DVEFAQNSGIQSINFL 181 (204)
T ss_dssp -H-HHHHHHHTCGGGEEEEECGG-GCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHH---HHHHHHHHTCEEEESS
T ss_pred -H-HHHHHHCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHH---HHHHHHHCCCEEEEEC
T ss_conf -3-44333101221222222222-3443202578889999982999751899947989---9999998699699984
No 195
>d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=23.31 E-value=15 Score=12.82 Aligned_cols=19 Identities=5% Similarity=0.204 Sum_probs=10.0
Q ss_pred HHHHHHCCCCEEEECCCCC
Q ss_conf 5555417982799615447
Q gi|254780901|r 166 LQYATNQGIDVIVIDHHQV 184 (600)
Q Consensus 166 i~~a~~~GidvIVtDHH~~ 184 (600)
++..+..|.|+++.=.|+.
T Consensus 73 ~~~~n~~gyDa~~~GNHEf 91 (302)
T d2z1aa2 73 RYFMHRLRYRAMALGNHEF 91 (302)
T ss_dssp HHHHHHTTCCEEECCGGGG
T ss_pred HHHHHHCCCCCCCCCCHHH
T ss_conf 9999863664230560664
No 196
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=23.22 E-value=15 Score=12.80 Aligned_cols=35 Identities=23% Similarity=0.340 Sum_probs=25.8
Q ss_pred CEEEEECCCCC-CHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 68999648876-234555554179827996154476
Q gi|254780901|r 151 QLIITVDCGST-SYDALQYATNQGIDVIVIDHHQVK 185 (600)
Q Consensus 151 ~LiItvD~Gi~-~~e~i~~a~~~GidvIVtDHH~~~ 185 (600)
++|+.+||.-| .+--+.+++++|.++.|+.+-++.
T Consensus 2 ~~~liiD~~dsft~Ni~~~l~~lG~~~~vi~~d~~~ 37 (195)
T d1qdlb_ 2 DLTLIIDNYDSFVYNIAQIVGELGSYPIVIRNDEIS 37 (195)
T ss_dssp CEEEEEECSCSSHHHHHHHHHHTTCEEEEEETTTSC
T ss_pred CEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf 779999788836999999998689948999489789
No 197
>d1toaa_ c.92.2.2 (A:) Periplasmic zinc binding protein TroA {Treponema pallidum [TaxId: 160]}
Probab=23.22 E-value=15 Score=12.80 Aligned_cols=52 Identities=13% Similarity=0.146 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHCC---CCEEEEECCCC-CCCCCCCHHHHHHHHHCCCCEEEEECCC
Q ss_conf 528999999999769---94799807874-3366889789887420268689996488
Q gi|254780901|r 106 AASVALMMRFLSHCS---VNANMYIPDRI-VDGYGPNPSLMEKFINEGAQLIITVDCG 159 (600)
Q Consensus 106 itstail~~~L~~~g---~~v~~~IP~R~-~eGYGl~~~~i~~~~~~g~~LiItvD~G 159 (600)
+||+..++.+.+.++ .+|.+.+|.-. -+.|-+++.-+..+.+ .+|+|...-|
T Consensus 6 v~t~~pl~~~v~~I~gd~v~V~~lip~~~dPH~ye~~p~d~~~l~~--ADliv~~G~~ 61 (277)
T d1toaa_ 6 VTTIGMIADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGDVEWLGN--ADLILYNGLH 61 (277)
T ss_dssp EESSHHHHHHHHHHHGGGSEEEESCCTTCCTTTCCCCHHHHHHHHH--CSEEEECCTT
T ss_pred EEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHC--CCEEEECCCC
T ss_conf 9988799999999829945899806979798277689999999956--9999998998
No 198
>d1v1qa_ b.40.4.3 (A:) Primosomal replication protein N, PriB {Escherichia coli [TaxId: 562]}
Probab=23.17 E-value=15 Score=12.80 Aligned_cols=53 Identities=11% Similarity=0.177 Sum_probs=37.0
Q ss_pred EEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEEEEECCC-CEEEEEEEEEEECCC
Q ss_conf 7999997787870123553069987999999766545781-105899998011131
Q gi|254780901|r 540 TLQAIAFRVYGTPLGEFLMQSRGKRMHVTGHLCVNYWRGS-KRCQLRVLDASPVEG 594 (600)
Q Consensus 540 ~i~aI~Fn~~~~~~~~~~~~~~g~~idii~~l~~N~~~G~-~s~QL~I~Di~p~e~ 594 (600)
.+++++|+-....+.++ ...|..+-+-+.|....|++. .++.+.+..|+-.+.
T Consensus 53 ~i~vv~~g~~Ae~~~~~--l~kG~~v~v~G~L~~~~~~~~~~r~v~~a~~ie~l~s 106 (111)
T d1v1qa_ 53 QMPVIVSGHENQAITHS--ITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDS 106 (111)
T ss_dssp EEEEEEESTGGGGGGTT--CCTTCEEEEEEEEEEECTTTTSCEEEEEEEEEEETTS
T ss_pred EEEEEEECHHHHHHHHH--HCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEECC
T ss_conf 99789968999999987--2589999999998770262899779999999999517
No 199
>d1jl3a_ c.44.1.1 (A:) Arsenate reductase ArsC {Bacillus subtilis [TaxId: 1423]}
Probab=23.13 E-value=15 Score=12.79 Aligned_cols=20 Identities=20% Similarity=0.453 Sum_probs=11.3
Q ss_pred CCCCCCCHHHHHHHHHCCCC
Q ss_conf 33668897898874202686
Q gi|254780901|r 132 VDGYGPNPSLMEKFINEGAQ 151 (600)
Q Consensus 132 ~eGYGl~~~~i~~~~~~g~~ 151 (600)
.+++++++.+++-+.+.|.+
T Consensus 37 ~~~~~v~~~a~~~l~e~gid 56 (137)
T d1jl3a_ 37 IEAHGLNPNAVKAMKEVGID 56 (137)
T ss_dssp SSCCCCCHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHHHHHHHH
T ss_conf 34566227889999876531
No 200
>d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]}
Probab=23.11 E-value=15 Score=12.79 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=14.3
Q ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 6725652378888643344304788999999999
Q gi|254780901|r 189 IPAYALVNPNRLDDLSGQGHLCAAGVVFLVLVLI 222 (600)
Q Consensus 189 p~a~aivNP~~~~~~~p~~~l~gaGvaf~l~~al 222 (600)
.|..+|++|...-.. |.+.. .+|..=-|..++
T Consensus 172 ~P~~~i~Dp~l~~~~-P~~~~-~~~~~Dal~h~~ 203 (390)
T d1oj7a_ 172 QPVFAVLDPVYTYTL-PPRQV-ANGVVDAFVHTV 203 (390)
T ss_dssp SCSEEEECGGGGTTC-CHHHH-HHHHHHHHHHHH
T ss_pred CCCEEEEHHHHCCCC-CHHHH-CCCHHHHHHHHH
T ss_conf 145046514430369-74443-032255888888
No 201
>d1i6pa_ c.53.2.1 (A:) beta-carbonic anhydrase {Escherichia coli [TaxId: 562]}
Probab=22.75 E-value=16 Score=12.74 Aligned_cols=13 Identities=15% Similarity=0.258 Sum_probs=7.9
Q ss_pred HCCCCEEEEECCC
Q ss_conf 7799799994078
Q gi|254780901|r 90 YNSEKIMIFGDYD 102 (600)
Q Consensus 90 ~~~ekI~I~gDyD 102 (600)
.+.-+++++|=-|
T Consensus 31 gQ~P~~~vi~CsD 43 (214)
T d1i6pa_ 31 AQKPRFLWIGCSD 43 (214)
T ss_dssp CCCCSEEEEEETT
T ss_pred CCCCCEEEEEECC
T ss_conf 8999559997737
No 202
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}
Probab=22.60 E-value=16 Score=12.72 Aligned_cols=90 Identities=12% Similarity=0.208 Sum_probs=57.1
Q ss_pred HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC-C
Q ss_conf 999999977997999940788615289999999997699479980787433668897898874202686899964887-6
Q gi|254780901|r 83 RRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGS-T 161 (600)
Q Consensus 83 ~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi-~ 161 (600)
+.+.+.+++..-|.|.---|.| -..-+.++|..-|.++.- |+-|-.+ ..++|+.+.++..+++|-+ |+ .
T Consensus 5 ~~~~~~l~~~~iipvlr~~~~~---~~~~~~~al~~~Gi~~iE-itl~~~~----a~~~I~~l~~~~p~~~vGa--GTV~ 74 (212)
T d1vhca_ 5 QQIIEKLRELKIVPVIALDNAD---DILPLADTLAKNGLSVAE-ITFRSEA----AADAIRLLRANRPDFLIAA--GTVL 74 (212)
T ss_dssp HHHHHHHHHHCEEEEECCSSGG---GHHHHHHHHHHTTCCEEE-EETTSTT----HHHHHHHHHHHCTTCEEEE--ESCC
T ss_pred HHHHHHHHHCCEEEEEECCCHH---HHHHHHHHHHHCCCCEEE-EECCCHH----HHHHHHHHHHCCCCCEEEE--EECC
T ss_conf 9999999879989999689999---999999999987998899-9578815----8999999986288734766--3146
Q ss_pred CHHHHHHHHHCCCCEEEECCC
Q ss_conf 234555554179827996154
Q gi|254780901|r 162 SYDALQYATNQGIDVIVIDHH 182 (600)
Q Consensus 162 ~~e~i~~a~~~GidvIVtDHH 182 (600)
+.++++.+.+.|.+.||+=|-
T Consensus 75 ~~~~~~~a~~aGa~FivSP~~ 95 (212)
T d1vhca_ 75 TAEQVVLAKSSGADFVVTPGL 95 (212)
T ss_dssp SHHHHHHHHHHTCSEEECSSC
T ss_pred CHHHHHHHHHHCCCEEECCCC
T ss_conf 589999998617868977888
No 203
>d2eg6a1 c.1.9.4 (A:4-346) Dihydroorotase {Escherichia coli [TaxId: 562]}
Probab=22.58 E-value=16 Score=12.72 Aligned_cols=27 Identities=19% Similarity=0.266 Sum_probs=11.2
Q ss_pred HHHHHHHHHHCCCCEE-EEECCCCCHHH
Q ss_conf 9999999997799799-99407886152
Q gi|254780901|r 81 AARRIVQAIYNSEKIM-IFGDYDVDGAA 107 (600)
Q Consensus 81 A~~ri~~ai~~~ekI~-I~gDyD~DGit 107 (600)
-.+|+.++...+-.+. .++-|-.++.+
T Consensus 55 ~~~ri~~~~~~~~~~~~~~~~~~~~~~~ 82 (343)
T d2eg6a1 55 YRQRILDAVPAGHDFTPLMTCYLTDSLD 82 (343)
T ss_dssp HHHHHHHHSCTTCCCEEEEEEECCTTCC
T ss_pred HHHHHHHHCCCCCCEEEEEEEECCCCCC
T ss_conf 9999998452467435566554367777
No 204
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]}
Probab=22.40 E-value=16 Score=12.69 Aligned_cols=21 Identities=14% Similarity=0.298 Sum_probs=17.1
Q ss_pred HHHHHHHHCCCCEEEECCCCC
Q ss_conf 455555417982799615447
Q gi|254780901|r 164 DALQYATNQGIDVIVIDHHQV 184 (600)
Q Consensus 164 e~i~~a~~~GidvIVtDHH~~ 184 (600)
..|+.|+++||.+|||-||-.
T Consensus 55 ~~i~~~~~~Gi~~iv~l~~~~ 75 (393)
T d1kwga2 55 EAIATLAAEGLKVVLGTPTAT 75 (393)
T ss_dssp HHHHHHHTTTCEEEEECSTTS
T ss_pred HHHHHHHHCCCEEEEECCCCC
T ss_conf 999999987999999767777
No 205
>d2pl1a1 c.23.1.1 (A:1-119) PhoP receiver domain {Escherichia coli [TaxId: 562]}
Probab=22.31 E-value=16 Score=12.67 Aligned_cols=16 Identities=0% Similarity=-0.051 Sum_probs=6.5
Q ss_pred HHHHHHHHHHCCCCEE
Q ss_conf 9999999997699479
Q gi|254780901|r 109 VALMMRFLSHCSVNAN 124 (600)
Q Consensus 109 tail~~~L~~~g~~v~ 124 (600)
..++...|+..|.+|.
T Consensus 13 ~~~l~~~L~~~G~~v~ 28 (119)
T d2pl1a1 13 RHHLKVQIQDAGHQVD 28 (119)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHCCCEEE
T ss_conf 9999999998799999
No 206
>d2idob1 a.237.1.1 (B:2-76) Homolog of theta (HOT) {Bacteriophage P1 [TaxId: 10678]}
Probab=22.28 E-value=14 Score=13.06 Aligned_cols=11 Identities=36% Similarity=0.552 Sum_probs=7.6
Q ss_pred CCHHHHHHHHH
Q ss_conf 43047889999
Q gi|254780901|r 207 GHLCAAGVVFL 217 (600)
Q Consensus 207 ~~l~gaGvaf~ 217 (600)
-+|+++||||+
T Consensus 18 VDLaAsgVa~k 28 (75)
T d2idob1 18 VDLAASGVAYK 28 (75)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 88998676999
No 207
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Probab=22.00 E-value=16 Score=12.63 Aligned_cols=75 Identities=19% Similarity=0.321 Sum_probs=49.5
Q ss_pred HHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCCHHH---H-HHHH
Q ss_conf 5561487999999999997799799994078861528999999999769947998078-743366889789---8-8742
Q gi|254780901|r 72 PLILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPD-RIVDGYGPNPSL---M-EKFI 146 (600)
Q Consensus 72 P~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~-R~~eGYGl~~~~---i-~~~~ 146 (600)
-+.|+.++.| +++.++++..++|+|.| =|.++.-+ ...|...|.+|+..-+. |+- +..+.++. + +.+.
T Consensus 11 v~~lrtl~Da-~~l~~~~~~~~~vvIIG----gG~iG~E~-A~~l~~~g~~Vtli~~~~~~l-~~~~~~~~~~~~~~~l~ 83 (121)
T d1d7ya2 11 VHTLRTLEDA-RRIQAGLRPQSRLLIVG----GGVIGLEL-AATARTAGVHVSLVETQPRLM-SRAAPATLADFVARYHA 83 (121)
T ss_dssp EEECCSHHHH-HHHHHHCCTTCEEEEEC----CSHHHHHH-HHHHHHTTCEEEEEESSSSTT-TTTSCHHHHHHHHHHHH
T ss_pred EEEECCHHHH-HHHHHHHHCCCEEEEEC----CCHHHHHH-HHHHHCCCCEEEEEEECCCCC-CCCCCHHHHHHHHHHHH
T ss_conf 8884899999-99998632088599999----63349998-888606661699996066211-44588899999999999
Q ss_pred HCCCCEE
Q ss_conf 0268689
Q gi|254780901|r 147 NEGAQLI 153 (600)
Q Consensus 147 ~~g~~Li 153 (600)
+.|++++
T Consensus 84 ~~GV~i~ 90 (121)
T d1d7ya2 84 AQGVDLR 90 (121)
T ss_dssp TTTCEEE
T ss_pred HCCCEEE
T ss_conf 7794999
No 208
>d2ji7a3 c.36.1.9 (A:370-552) Oxalyl-CoA decarboxylase {Oxalobacter formigenes [TaxId: 847]}
Probab=21.86 E-value=16 Score=12.61 Aligned_cols=18 Identities=0% Similarity=0.093 Sum_probs=7.9
Q ss_pred CCCHHHHHHHHHHHHHCC
Q ss_conf 148799999999999779
Q gi|254780901|r 75 LTDCDKAARRIVQAIYNS 92 (600)
Q Consensus 75 l~dm~~A~~ri~~ai~~~ 92 (600)
+.....+...|.+.+..+
T Consensus 5 ~~~~~~~~~~l~~~~~~~ 22 (183)
T d2ji7a3 5 MMNYSNSLGVVRDFMLAN 22 (183)
T ss_dssp CBCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHCC
T ss_conf 589999999999987529
No 209
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]}
Probab=21.81 E-value=16 Score=12.60 Aligned_cols=37 Identities=16% Similarity=0.314 Sum_probs=26.3
Q ss_pred HHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCC
Q ss_conf 420268689996488762345555541798279961544
Q gi|254780901|r 145 FINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQ 183 (600)
Q Consensus 145 ~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDHH~ 183 (600)
+.++.+|+|| |-.|.+-.-+.-.|++.| +|+|+|--.
T Consensus 3 ~p~~~~DVvV-VG~G~AGl~AA~~a~~~g-~V~llEK~~ 39 (305)
T d1chua2 3 LPEHSCDVLI-IGSGAAGLSLALRLADQH-QVIVLSKGP 39 (305)
T ss_dssp CCSEECSEEE-ECCSHHHHHHHHHHTTTS-CEEEECSSC
T ss_pred CCCCCCCEEE-ECCCHHHHHHHHHHHCCC-CEEEEECCC
T ss_conf 8765089999-996499999999863489-989997789
No 210
>d1p90a_ c.55.5.2 (A:) NafY core domain {Azotobacter vinelandii [TaxId: 354]}
Probab=21.55 E-value=16 Score=12.57 Aligned_cols=44 Identities=11% Similarity=0.109 Sum_probs=27.2
Q ss_pred CCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf 68897898874202686899964887623455555417982799615
Q gi|254780901|r 135 YGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDH 181 (600)
Q Consensus 135 YGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDH 181 (600)
++-......-...+|++.+|+...|-.+. ..+.+.||.++.+.-
T Consensus 53 ~~~~~~~~~~~~~~~~~vvi~~~iG~~a~---~~L~~~GI~vi~~~~ 96 (123)
T d1p90a_ 53 LAEDKNAWRVEQIQDCQVLYVVSIGGPAA---AKVVRAGIHPLKKPK 96 (123)
T ss_dssp GCSSHHHHHHHHTTTCSEEEESBCCHHHH---HHHHHTTCEEEECTT
T ss_pred CCCCCCHHHHHHHCCCCEEEECCCCHHHH---HHHHHCCCEEEEECC
T ss_conf 56541067775307986999877786389---999978958999189
No 211
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}
Probab=21.54 E-value=16 Score=12.56 Aligned_cols=91 Identities=10% Similarity=0.033 Sum_probs=48.9
Q ss_pred CCHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 99556148799999999999779979999407886152899999999976994799807874336688978988742026
Q gi|254780901|r 70 PDPLILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEG 149 (600)
Q Consensus 70 ~dP~~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g 149 (600)
+||+. ---.|+++ ..++.++.++|+| +-|+ + .+....++..|+...+.+- .+.+..+.+.+.|
T Consensus 8 ~d~~~--ta~~a~~~--a~v~~G~tVlV~G---aG~v-G-l~a~~~ak~~ga~~Vi~~d--------~~~~rl~~a~~~G 70 (195)
T d1kola2 8 SDILP--TGYHGAVT--AGVGPGSTVYVAG---AGPV-G-LAAAASARLLGAAVVIVGD--------LNPARLAHAKAQG 70 (195)
T ss_dssp GTHHH--HHHHHHHH--TTCCTTCEEEEEC---CSHH-H-HHHHHHHHHTTCSEEEEEE--------SCHHHHHHHHHTT
T ss_pred CCHHH--HHHHHHHH--HCCCCCCEEEEEC---CCHH-H-HHHHHHHHHHCCCCEEEEC--------CCCHHHHHHHHCC
T ss_conf 15899--99999998--3999999999989---5878-9-9999999760565414530--------4104667665246
Q ss_pred CCEEEEECCCCCCHHHHHH-HHHCCCCEEE
Q ss_conf 8689996488762345555-5417982799
Q gi|254780901|r 150 AQLIITVDCGSTSYDALQY-ATNQGIDVIV 178 (600)
Q Consensus 150 ~~LiItvD~Gi~~~e~i~~-a~~~GidvIV 178 (600)
++.+|.- ....-.+++.. ....|.|+++
T Consensus 71 a~~~~~~-~~~~~~~~i~~~t~g~g~D~vi 99 (195)
T d1kola2 71 FEIADLS-LDTPLHEQIAALLGEPEVDCAV 99 (195)
T ss_dssp CEEEETT-SSSCHHHHHHHHHSSSCEEEEE
T ss_pred CCEEEEC-CCCCHHHHHHHHHCCCCCEEEE
T ss_conf 6279707-9867999999983899837999
No 212
>d1m5wa_ c.1.24.1 (A:) Pyridoxine 5'-phosphate synthase {Escherichia coli [TaxId: 562]}
Probab=21.42 E-value=16 Score=12.55 Aligned_cols=63 Identities=14% Similarity=0.275 Sum_probs=47.2
Q ss_pred HHHHHHHCCCCEEEEECCCCCC---CCCCCH--------HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEE
Q ss_conf 9999997699479980787433---668897--------89887420268689996488762345555541798279
Q gi|254780901|r 112 MMRFLSHCSVNANMYIPDRIVD---GYGPNP--------SLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVI 177 (600)
Q Consensus 112 l~~~L~~~g~~v~~~IP~R~~e---GYGl~~--------~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvI 177 (600)
|.........+-...+|++-.| -+|++. ..++++++.|...=+++|- +.++++.|++.|.|.|
T Consensus 78 ~i~ia~~~kP~qvtLVPe~r~elTTegGld~~~~~~~L~~~i~~l~~~girvSLFiDp---d~~~i~~a~~lGad~I 151 (242)
T d1m5wa_ 78 MLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDA---DEEQIKAAAEVGAPFI 151 (242)
T ss_dssp HHHHHHHHCCSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECS---CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCEEEEEECC---CHHHHHHHHHCCCCEE
T ss_conf 8999987163227886257555576775520215889999999998669707999445---2465778864276635
No 213
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment (residues 410-1202) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.39 E-value=16 Score=12.54 Aligned_cols=27 Identities=33% Similarity=0.545 Sum_probs=21.7
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf 997999940788615289999999997
Q gi|254780901|r 92 SEKIMIFGDYDVDGAASVALMMRFLSH 118 (600)
Q Consensus 92 ~ekI~I~gDyD~DGitstail~~~L~~ 118 (600)
=.+|+|..|-|+||.-=..+|..|+-.
T Consensus 100 Y~~i~imtDaD~DG~hI~~Lll~ff~~ 126 (760)
T d1bjta_ 100 YGHLMIMTDQDHDGSHIKGLIINFLES 126 (760)
T ss_dssp CSEEEEEEC-----CCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 786799988988704799999999998
No 214
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=21.35 E-value=17 Score=12.54 Aligned_cols=28 Identities=11% Similarity=0.101 Sum_probs=18.8
Q ss_pred CCCEEEEECCCCC-CHHHHHHHHHCCCCEE
Q ss_conf 6868999648876-2345555541798279
Q gi|254780901|r 149 GAQLIITVDCGST-SYDALQYATNQGIDVI 177 (600)
Q Consensus 149 g~~LiItvD~Gi~-~~e~i~~a~~~GidvI 177 (600)
+++++| +-.++. +..|+.+|+++||.|.
T Consensus 60 ~~d~vV-~SsAI~~~npel~~A~~~gIpv~ 88 (89)
T d1j6ua1 60 DPDLVI-KTPAVRDDNPEIVRARMERVPIE 88 (89)
T ss_dssp CCSEEE-ECTTCCTTCHHHHHHHHTTCCEE
T ss_pred CCCEEE-EECCCCCCCHHHHHHHHCCCCCC
T ss_conf 997899-82575998999999998599803
No 215
>d1ybha1 c.31.1.3 (A:281-459) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}
Probab=21.29 E-value=17 Score=12.53 Aligned_cols=77 Identities=16% Similarity=0.170 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHCCCC-EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEE------ECCC--CCCC-CCC--CHHHHHHHHH
Q ss_conf 999999999977997-99994078861528999999999769947998------0787--4336-688--9789887420
Q gi|254780901|r 80 KAARRIVQAIYNSEK-IMIFGDYDVDGAASVALMMRFLSHCSVNANMY------IPDR--IVDG-YGP--NPSLMEKFIN 147 (600)
Q Consensus 80 ~A~~ri~~ai~~~ek-I~I~gDyD~DGitstail~~~L~~~g~~v~~~------IP~R--~~eG-YGl--~~~~i~~~~~ 147 (600)
+.++++.+.|.+-++ +.|.| .-| ..|..-+.++...+|+-|..- +|+. +.-| .|. +..+ ..+.+
T Consensus 7 ~~i~~~~~~L~~AkrPvii~G-~G~--~~a~~~l~~lae~~~~Pv~tt~~~~g~~~~~h~~~~G~~G~~g~~~~-~~~~~ 82 (179)
T d1ybha1 7 SHLEQIVRLISESKKPVLYVG-GGC--LNSSDELGRFVELTGIPVASTLMGLGSYPCDDELSLHMLGMHGTVYA-NYAVE 82 (179)
T ss_dssp HHHHHHHHHHHHCSSEEEEEC-GGG--TTCHHHHHHHHHHHCCCEEECTTTTTSSCTTSTTEEEECSTTSCHHH-HHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEC-HHH--HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHH-HHHHH
T ss_conf 999999999985899299989-879--99999999987653424200456667776433334445788688999-99997
Q ss_pred CCCCEEEEECCCCC
Q ss_conf 26868999648876
Q gi|254780901|r 148 EGAQLIITVDCGST 161 (600)
Q Consensus 148 ~g~~LiItvD~Gi~ 161 (600)
.++|||++.+-.+
T Consensus 83 -~aDlil~lG~~l~ 95 (179)
T d1ybha1 83 -HSDLLLAFGVRFD 95 (179)
T ss_dssp -HCSEEEEESCCCC
T ss_pred -HHHHHHHCCCCCC
T ss_conf -5445432036656
No 216
>d1j5wa_ d.104.1.1 (A:) Glycyl-tRNA synthetase (GlyRS) alpha chain {Thermotoga maritima [TaxId: 2336]}
Probab=21.02 E-value=11 Score=13.88 Aligned_cols=92 Identities=21% Similarity=0.364 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCC---CEEEEECCC-CCCC-CCCCHHHHHHHHHCCCCEEE
Q ss_conf 999999999977997999940788615289999999997699---479980787-4336-68897898874202686899
Q gi|254780901|r 80 KAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSV---NANMYIPDR-IVDG-YGPNPSLMEKFINEGAQLII 154 (600)
Q Consensus 80 ~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~---~v~~~IP~R-~~eG-YGl~~~~i~~~~~~g~~LiI 154 (600)
..+-.+.+ -..++.-+|.--||..==.+|-=-..+|+.+|. ++-|.-|+| -+|| ||-|+..+....+ ...||
T Consensus 5 ~~i~~L~~-~W~~~gC~i~qpyd~evGAgT~~p~T~lr~lgp~pw~~ayvqpsrRP~DgRYg~NPNRlq~y~Q--fQVi~ 81 (281)
T d1j5wa_ 5 DVIMKLND-FWASKGCLLEQPYDMEVGAGTFHPATFFGSLRKGPWKVAYVQPSRRPTDGRYGENPNRLQRYFQ--YQVII 81 (281)
T ss_dssp HHHHHHHH-HHHHTTCEECCCCSSCCSSGGGSHHHHTGGGCSSCEEEEEEEEEECCC-----CCTTCCSEEEE--EEEEE
T ss_pred HHHHHHHH-HHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH--EEEEE
T ss_conf 99999999-9987897897776554464668758887404998753234355668865433589204434553--02350
Q ss_pred EECCCCCCHHHH--HHHHHCCCCE
Q ss_conf 964887623455--5554179827
Q gi|254780901|r 155 TVDCGSTSYDAL--QYATNQGIDV 176 (600)
Q Consensus 155 tvD~Gi~~~e~i--~~a~~~Gidv 176 (600)
-..- .+..++ +-++..|||.
T Consensus 82 KPsp--~n~q~lyL~SL~~igid~ 103 (281)
T d1j5wa_ 82 KPSP--ENSQELYLESLEYLGINL 103 (281)
T ss_dssp ESCC--SSHHHHHHHHHHHTTCCT
T ss_pred CCCC--CCHHHHHHHHHHHCCCCC
T ss_conf 5894--128999999999819993
No 217
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=21.01 E-value=17 Score=12.48 Aligned_cols=54 Identities=19% Similarity=0.239 Sum_probs=26.7
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 97999940788615289999999997699479980787433668897898874202686899964887
Q gi|254780901|r 93 EKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGS 160 (600)
Q Consensus 93 ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi 160 (600)
+||+|.- |--+...++...|+..|.++... .+| .++++.+.+..+++|| +|...
T Consensus 2 krILiVD----D~~~~~~~l~~~L~~~g~~v~~a-----~~~----~~al~~~~~~~~dlil-~D~~m 55 (123)
T d1mb3a_ 2 KKVLIVE----DNELNMKLFHDLLEAQGYETLQT-----REG----LSALSIARENKPDLIL-MDIQL 55 (123)
T ss_dssp CEEEEEC----SCHHHHHHHHHHHHHTTCEEEEE-----SCH----HHHHHHHHHHCCSEEE-EESBC
T ss_pred CEEEEEE----CCHHHHHHHHHHHHHCCCEEEEE-----CCH----HHHHHHHHHCCCCEEE-EEECC
T ss_conf 6699998----88999999999999879999997-----888----9999999817988899-87502
No 218
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.94 E-value=17 Score=12.47 Aligned_cols=88 Identities=17% Similarity=0.190 Sum_probs=45.4
Q ss_pred HHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH----HHHCCCCEEEEEC
Q ss_conf 999999977-99799994078861528999999999769947998078743366889789887----4202686899964
Q gi|254780901|r 83 RRIVQAIYN-SEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEK----FINEGAQLIITVD 157 (600)
Q Consensus 83 ~ri~~ai~~-~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~----~~~~g~~LiItvD 157 (600)
.++.+.+++ +.|++|+.|--+--. +..-+.+.|+..+..+.+.+.. | -.+.+.+++ +.+.++++||.+-
T Consensus 20 ~~l~~~l~~~g~r~lvvtd~~~~~~-~~~~l~~~L~~~~i~~~~~~~~----~-~p~~~~v~~~~~~~~~~~~D~IiavG 93 (366)
T d1jq5a_ 20 TKIANYLEGIGNKTVVIADEIVWKI-AGHTIVNELKKGNIAAEEVVFS----G-EASRNEVERIANIARKAEAAIVIGVG 93 (366)
T ss_dssp GGHHHHHTTTCSEEEEEECHHHHHH-THHHHHHHHHTTTCEEEEEECC----S-SCBHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEECCCHHHH-HHHHHHHHHHHCCCEEEEEEEC----C-CCCHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 9999999974994899989857899-9999999998779969999818----9-99999999999986203886899816
Q ss_pred CCCCCHHHHHH-HHHCCCCEE
Q ss_conf 88762345555-541798279
Q gi|254780901|r 158 CGSTSYDALQY-ATNQGIDVI 177 (600)
Q Consensus 158 ~Gi~~~e~i~~-a~~~GidvI 177 (600)
=|+. .+..+. |..+++.+|
T Consensus 94 GGs~-iD~aK~iA~~~~~p~i 113 (366)
T d1jq5a_ 94 GGKT-LDTAKAVADELDAYIV 113 (366)
T ss_dssp SHHH-HHHHHHHHHHHTCEEE
T ss_pred CCCC-CCCHHEEEECCCCEEE
T ss_conf 8864-4220001204665354
No 219
>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}
Probab=20.86 E-value=17 Score=12.46 Aligned_cols=34 Identities=9% Similarity=0.098 Sum_probs=21.2
Q ss_pred HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 977997999940788615289999999997699479980
Q gi|254780901|r 89 IYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYI 127 (600)
Q Consensus 89 i~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~I 127 (600)
++.++.++|+| +=|+ ..+...+++.+|+.+.+.+
T Consensus 26 ~~~G~tVlI~G---aGGv--G~~aiq~ak~~G~~~vi~~ 59 (176)
T d2fzwa2 26 LEPGSVCAVFG---LGGV--GLAVIMGCKVAGASRIIGV 59 (176)
T ss_dssp CCTTCEEEEEC---CSHH--HHHHHHHHHHHTCSEEEEE
T ss_pred CCCCCEEEEEC---CHHH--HHHHHHHHHHHHCCCEEEE
T ss_conf 99999999956---3567--8999999999850846997
No 220
>d3pmga2 c.84.1.1 (A:191-303) Phosphoglucomutase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=20.85 E-value=17 Score=12.46 Aligned_cols=39 Identities=8% Similarity=-0.095 Sum_probs=15.0
Q ss_pred CCEEEEECCCCCCHHHHHHH-HHCCCCEEEECCCCCCCCC
Q ss_conf 86899964887623455555-4179827996154476555
Q gi|254780901|r 150 AQLIITVDCGSTSYDALQYA-TNQGIDVIVIDHHQVKSEE 188 (600)
Q Consensus 150 ~~LiItvD~Gi~~~e~i~~a-~~~GidvIVtDHH~~~~~~ 188 (600)
.++++.+=+|+++.-.-+.+ +.+|.++.+.=|.+|....
T Consensus 27 lkIv~D~~nGa~~~~~~~il~~~~g~~~~~~~~~~pd~~f 66 (113)
T d3pmga2 27 LKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDF 66 (113)
T ss_dssp CCEEEECTTSTTHHHHHHHHTTTTCCCGGGEESCSCCTTG
T ss_pred CEEEEECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCC
T ss_conf 6899978877563221999987259951797568567787
No 221
>d1qo2a_ c.1.2.1 (A:) Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA {Thermotoga maritima [TaxId: 2336]}
Probab=20.77 E-value=17 Score=12.45 Aligned_cols=68 Identities=15% Similarity=0.158 Sum_probs=44.0
Q ss_pred HHHHHHHCCCCEEEEE-CCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf 9999997699479980-787433668897898874202686899964887623455555417982799615
Q gi|254780901|r 112 MMRFLSHCSVNANMYI-PDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDH 181 (600)
Q Consensus 112 l~~~L~~~g~~v~~~I-P~R~~eGYGl~~~~i~~~~~~g~~LiItvD~Gi~~~e~i~~a~~~GidvIVtDH 181 (600)
+.+.+...|++--|.+ -+...+|=+.+...++.+.+.. .=+++.-||.+.+.++.+-+.|.+-||+--
T Consensus 35 ~a~~~~~~g~~~l~ivDLda~~~~~~~~~~~~~~~~~~~--~pl~~gGGI~s~~~~~~~~~~Ga~kVvi~s 103 (241)
T d1qo2a_ 35 LVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLSEFA--EHIQIGGGIRSLDYAEKLRKLGYRRQIVSS 103 (241)
T ss_dssp HHHHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHHGGGGG--GGEEEESSCCSHHHHHHHHHTTCCEEEECH
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCCHHHEEHHCCCC--CCHHHHHHHHHHHHHHHCCCCCCCEEECCC
T ss_conf 999999879987999952452014775022100001355--643532321000001111233332684275
No 222
>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}
Probab=20.67 E-value=17 Score=12.43 Aligned_cols=55 Identities=22% Similarity=0.222 Sum_probs=33.9
Q ss_pred EEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEE------CCCCHHHHHHHHHHHHHHH
Q ss_conf 9864898618888885303353011565322231464------2221588999999999862
Q gi|254780901|r 412 SGRSIEGFDIGKMVSFAVEEGILVKGGGHAMAAGLTV------ERVNFGRLCDFFQKFAHNI 467 (600)
Q Consensus 412 S~RSi~g~~l~~~l~~~~~~~ll~~~GGH~~AaG~ti------~~~~l~~f~~~l~~~~~~~ 467 (600)
+.+-+++++-.++.+.+.+.++ .-.+||..+.||.| ..++++.|.+.++++.+++
T Consensus 300 ~~~~~~~~~~~~~~~~L~~~GI-~~~~G~~~~g~~RIs~~~~~~~edv~~Lv~~l~~~~~~~ 360 (361)
T d2c0ra1 300 TFRLASEELEKEFVKASEQEGF-VGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRSR 360 (361)
T ss_dssp EEECSCHHHHHHHHHHHHHTTE-ESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHCCC-EEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 9978985469999999997888-873698867869887068899999999999999999965
No 223
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=20.65 E-value=17 Score=12.43 Aligned_cols=100 Identities=18% Similarity=0.356 Sum_probs=58.3
Q ss_pred HCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEE-EEECCCCCCCCCCC-HHHHHHHHH-CCC
Q ss_conf 614879999999999977997999940788615289999999997699479-98078743366889-789887420-268
Q gi|254780901|r 74 ILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNAN-MYIPDRIVDGYGPN-PSLMEKFIN-EGA 150 (600)
Q Consensus 74 ~l~dm~~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~-~~IP~R~~eGYGl~-~~~i~~~~~-~g~ 150 (600)
.+..++.-.-.+..+.+++.+++|+.+ |+||-.=+.+..+-++- +.+|. ...| |||-+ .+.+++++. .|.
T Consensus 35 ki~~~~~i~p~Le~~~~~~rPLlIIA~-di~~~aL~~Lv~N~~~g-~l~v~aVkaP-----gfG~~r~~~L~DlA~~TGa 107 (184)
T d1sjpa2 35 KVSTVKDLLPLLEKVIGAGKPLLIIAE-DVEGEALSTLVVNKIRG-TFKSVAVKAP-----GFGDRRKAMLQDMAILTGG 107 (184)
T ss_dssp CBCCSTTTHHHHHHHHTTTCCEEEEES-CBCHHHHHHHHHHHHTT-SSCCEEEECS-----SCHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEECC-HHHHHHHHHHHHHHHCC-CHHEECCCCC-----CCCCCHHHHHHHHHHHHCC
T ss_conf 547688889998875236995899813-30289999999998547-4100113599-----9986367888999998398
Q ss_pred CEEEEECCCCCCHHHHHHHHHCCC--CEEEECCCC
Q ss_conf 689996488762345555541798--279961544
Q gi|254780901|r 151 QLIITVDCGSTSYDALQYATNQGI--DVIVIDHHQ 183 (600)
Q Consensus 151 ~LiItvD~Gi~~~e~i~~a~~~Gi--dvIVtDHH~ 183 (600)
.+ |+-|.|.. .+.+. ...+|- .|+|+.++.
T Consensus 108 ~v-i~~~~g~~-l~~~~-~~~LG~~~kv~itk~~T 139 (184)
T d1sjpa2 108 QV-ISEEVGLT-LENAD-LSLLGKARKVVVTKDET 139 (184)
T ss_dssp CE-EBTTTTBC-SSSCC-TTTSEEEEEEEECSSCE
T ss_pred EE-ECCCCCCC-CCCCC-HHHCCEEEEEEEECCCE
T ss_conf 77-64334643-22264-20278652899844754
No 224
>d1vi6a_ c.23.15.1 (A:) Ribosomal protein S2 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=20.57 E-value=17 Score=12.42 Aligned_cols=133 Identities=21% Similarity=0.216 Sum_probs=70.8
Q ss_pred CCCHHHHHHHHHHHHH-----CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 1487999999999997-----79979999407886152899999999976994799807874336688978988742026
Q gi|254780901|r 75 LTDCDKAARRIVQAIY-----NSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFINEG 149 (600)
Q Consensus 75 l~dm~~A~~ri~~ai~-----~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~~~g 149 (600)
+-|+++-.+.|.+|.+ ++.+|++.|--. .+.-+..++-+..|. +||..|..-|-=-|.. . .....
T Consensus 41 IIdL~kT~~~L~~A~~~l~~~~~~~ILfVgtk~----~~~~~v~~~A~~~g~---~~v~~RWlgG~LTN~~--~-~~~~~ 110 (193)
T d1vi6a_ 41 VLDIRKLDERIRVAAKFLSRYEPSKILLVAARQ----YAHKPVQMFSKVVGS---DYIVGRFIPGTLTNPM--L-SEYRE 110 (193)
T ss_dssp EECHHHHHHHHHHHHHHHTTSCGGGEEEEECSG----GGHHHHHHHHHHHCC---EEEESSCCTTTTTCTT--S-TTCCC
T ss_pred EEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCC----CHHHHHHHHHHHCCC---CCCCCCCCCCCCCCHH--H-HHCCC
T ss_conf 966999999999999999774267527762262----167899999986399---8544534577433167--7-52055
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEEE-ECCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHH-HHHHHHHHHHHHC
Q ss_conf 86899964887623455555417982799-615447655567256523788886433443047889-9999999999702
Q gi|254780901|r 150 AQLIITVDCGSTSYDALQYATNQGIDVIV-IDHHQVKSEEIPAYALVNPNRLDDLSGQGHLCAAGV-VFLVLVLIYRILR 227 (600)
Q Consensus 150 ~~LiItvD~Gi~~~e~i~~a~~~GidvIV-tDHH~~~~~~p~a~aivNP~~~~~~~p~~~l~gaGv-af~l~~al~~~l~ 227 (600)
++++|.+|-. .++.+|..|+.+||.||= +|--..|... .++| | |+ .+.....++ .|.|+.++.+.-+
T Consensus 111 P~~liv~dp~-~d~~ai~Ea~~l~IPvI~ivDTn~~p~~v--dy~I--P----~N--dds~~Si~li~~~l~~ai~~~k~ 179 (193)
T d1vi6a_ 111 PEVVFVNDPA-IDKQAVSEATAVGIPVVALCDSNNSSADV--DLVI--P----TN--NKGRRALAIVYWLLAREIAKIRG 179 (193)
T ss_dssp CSEEEESCTT-TTHHHHHHHHHTTCCEEEEECTTCCCTTC--SEEE--E----SC--CSCHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEECCC-CHHHHHHHHHHCCCCEEEEECCCCCCCCC--CEEE--E----CC--CCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 5189997686-10789999987389726673167998524--4688--6----88--87387999999999999999818
Q ss_pred C
Q ss_conf 1
Q gi|254780901|r 228 Q 228 (600)
Q Consensus 228 ~ 228 (600)
+
T Consensus 180 ~ 180 (193)
T d1vi6a_ 180 Q 180 (193)
T ss_dssp C
T ss_pred C
T ss_conf 8
No 225
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}
Probab=20.56 E-value=17 Score=12.42 Aligned_cols=73 Identities=11% Similarity=0.269 Sum_probs=38.2
Q ss_pred HHHHHHHHHHC-CCCEEEEECCC-CCHHHHHHHHHHHHHHCCCCEEEE--E-CCCCCCCCCCCHHHH----HHHHHCCCC
Q ss_conf 99999999977-99799994078-861528999999999769947998--0-787433668897898----874202686
Q gi|254780901|r 81 AARRIVQAIYN-SEKIMIFGDYD-VDGAASVALMMRFLSHCSVNANMY--I-PDRIVDGYGPNPSLM----EKFINEGAQ 151 (600)
Q Consensus 81 A~~ri~~ai~~-~ekI~I~gDyD-~DGitstail~~~L~~~g~~v~~~--I-P~R~~eGYGl~~~~i----~~~~~~g~~ 151 (600)
+.+++.+.+++ +.|++|..|-. ....-...-+...|+..|..+..| + |+ .+.+.+ +.+.+.+++
T Consensus 16 ~l~~l~~~~~~~g~k~liV~~~~~~~~~g~~~~v~~~L~~~~i~~~~f~~v~~~-------p~~~~v~~~~~~~~~~~~D 88 (359)
T d1o2da_ 16 ILEKRGNIIDLLGKRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEEN-------PSFDNVMKAVERYRNDSFD 88 (359)
T ss_dssp HHHHHGGGGGGTCSEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSS-------CBHHHHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC-------CCHHHHHHHHHHCCCCCCC
T ss_conf 999999999975995899985868887409999999998769849997574689-------7989998764200135775
Q ss_pred EEEEECCCC
Q ss_conf 899964887
Q gi|254780901|r 152 LIITVDCGS 160 (600)
Q Consensus 152 LiItvD~Gi 160 (600)
.||.+-=|+
T Consensus 89 ~IIavGGGs 97 (359)
T d1o2da_ 89 FVVGLGGGS 97 (359)
T ss_dssp EEEEEESHH
T ss_pred EEEECCCCC
T ss_conf 688516642
No 226
>d1wl8a1 c.23.16.1 (A:1-188) GMP synthase subunit A, GuaAA {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=20.53 E-value=17 Score=12.41 Aligned_cols=34 Identities=15% Similarity=0.263 Sum_probs=24.3
Q ss_pred EEEECCCCCCHHHH-HHHHHCCCCEEEECCCCCCC
Q ss_conf 99964887623455-55541798279961544765
Q gi|254780901|r 153 IITVDCGSTSYDAL-QYATNQGIDVIVIDHHQVKS 186 (600)
Q Consensus 153 iItvD~Gi~~~e~i-~~a~~~GidvIVtDHH~~~~ 186 (600)
|..+|+|.+...-| .+++++|+++.|+.+-...+
T Consensus 3 I~iiD~g~~~~~~i~~~L~~~G~~~~v~~~~~~~~ 37 (188)
T d1wl8a1 3 IVIMDNGGQYVHRIWRTLRYLGVETKIIPNTTPLE 37 (188)
T ss_dssp EEEEECSCTTHHHHHHHHHHTTCEEEEEETTCCHH
T ss_pred EEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCHH
T ss_conf 99998998389999999997799699996999889
No 227
>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}
Probab=20.30 E-value=17 Score=12.38 Aligned_cols=78 Identities=14% Similarity=0.180 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHH-HCCCCEEEEECC
Q ss_conf 9999999999779979999407886152899999999976994799807874336688978988742-026868999648
Q gi|254780901|r 80 KAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNANMYIPDRIVDGYGPNPSLMEKFI-NEGAQLIITVDC 158 (600)
Q Consensus 80 ~A~~ri~~ai~~~ekI~I~gDyD~DGitstail~~~L~~~g~~v~~~IP~R~~eGYGl~~~~i~~~~-~~g~~LiItvD~ 158 (600)
.+.+....+++.++.-+++. -|..+.+.....|..-|-.+.. | ...||-+...++... ..|++. .+||.
T Consensus 66 ~~LE~~la~LEgg~~a~~~s----SGmaAi~~~l~~ll~~Gd~vi~--~---~~~Yg~t~~~~~~~l~~~Gi~~-~~vd~ 135 (397)
T d1y4ia1 66 DALEKKLAVLERGEAGLATA----SGISAITTTLLTLCQQGDHIVS--A---SAIYGCTHAFLSHSMPKFGINV-RFVDA 135 (397)
T ss_dssp HHHHHHHHHHHTCSEEEEES----SHHHHHHHHHHHHCCTTCEEEE--E---SSSCHHHHHHHHTHHHHTTCEE-EEECT
T ss_pred HHHHHHHHHHHCCCCCEEEH----HHHHHHHHHHHHCCCCCCEEEE--E---CCCCCCCCHHHHCCCCCCCEEE-ECCCC
T ss_conf 99999999984996211106----7788888877631689986543--0---1012331035431367785575-41489
Q ss_pred CCCCHHHHHHH
Q ss_conf 87623455555
Q gi|254780901|r 159 GSTSYDALQYA 169 (600)
Q Consensus 159 Gi~~~e~i~~a 169 (600)
. +.++++.+
T Consensus 136 ~--d~~~~~~~ 144 (397)
T d1y4ia1 136 G--KPEEIRAA 144 (397)
T ss_dssp T--SHHHHHHH
T ss_pred C--CHHHHHHH
T ss_conf 9--98999986
No 228
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]}
Probab=20.05 E-value=17 Score=12.34 Aligned_cols=30 Identities=17% Similarity=0.233 Sum_probs=16.5
Q ss_pred EEEECCCCCCHHHH-HHHHHCCCCEEEECCC
Q ss_conf 99964887623455-5554179827996154
Q gi|254780901|r 153 IITVDCGSTSYDAL-QYATNQGIDVIVIDHH 182 (600)
Q Consensus 153 iItvD~Gi~~~e~i-~~a~~~GidvIVtDHH 182 (600)
|+.+|+|++...-| ...+++|+++.|..+-
T Consensus 8 I~IiD~G~~~~~~I~r~lr~lg~~~~I~~~d 38 (205)
T d1gpma2 8 ILILDFGSQYTQLVARRVRELGVYCELWAWD 38 (205)
T ss_dssp EEEEECSCTTHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 9999898649999999999879889998799
Done!