BLAST/PSIBLAST alignment of GI: 254780901 and GI: 209549146 at iteration 1
>gi|209549146|ref|YP_002281063.1| single-stranded-DNA-specific exonuclease RecJ [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 600
>gi|209534902|gb|ACI54837.1| single-stranded-DNA-specific exonuclease RecJ [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 600
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/591 (57%), Positives = 435/591 (73%), Gaps = 1/591 (0%)
Query: 4 QAFLGVECSISGFRWVSLLGQEGINRALAITQKHAIPDIVARVLVNRNVSIDYAKDFLNP 63
+AFLGVE S RWV+ L Q G NRALA++Q H +PD++ARVL R V+ D A +FL+P
Sbjct: 10 RAFLGVEKSALDNRWVARLDQAGQNRALAMSQIHGMPDLIARVLAGRGVTADEAIEFLDP 69
Query: 64 SIRLLMPDPLILTDCDKAARRIVQAIYNSEKIMIFGDYDVDGAASVALMMRFLSHCSVNA 123
+IR LMPDP ILTDC++AA R+V AI E + IFGDYDVDGAAS ALM RFL+H V A
Sbjct: 70 TIRGLMPDPHILTDCERAATRLVSAIERGENVAIFGDYDVDGAASSALMFRFLTHFGVKA 129
Query: 124 NMYIPDRIVDGYGPNPSLMEKFINEGAQLIITVDCGSTSYDALQYATNQGIDVIVIDHHQ 183
N+YIPDR+ +GYGPNP+ M + I+ GA+LI+TVDCGSTS++AL+ A + IDV+VIDHHQ
Sbjct: 130 NIYIPDRVFEGYGPNPAAMNQLIDNGARLIVTVDCGSTSHEALEAAAARSIDVVVIDHHQ 189
Query: 184 VKSEEIPAYALVNPNRLDDLSGQGHLCAAGVVFLVLVLIYRILRQD-NKVPLNFDLLSLL 242
V E +ALVNPNR DDLSGQGHLCAAGVVF+VLV R+LR NK L DLL L
Sbjct: 190 VTHELPHCHALVNPNREDDLSGQGHLCAAGVVFMVLVATLRLLRASGNKGILALDLLQWL 249
Query: 243 DLVALATVCDVVPLIGLNRAYVVKGLMVARRQGNPGLKALIERVNISSPITAENLGYMIG 302
D+VALATVCDVVPL GLNRAYVVKGL+ AR Q N GL AL + ++ P+T + G++IG
Sbjct: 250 DIVALATVCDVVPLKGLNRAYVVKGLVAARHQSNAGLAALFRKAGLAGPVTPYHFGFLIG 309
Query: 303 PSINAGGRIGESNLGSRLLISDDSQELEMLAMKLDVLNQNRRLMESAMLEQAEAKVLTQC 362
P INAGGRIG++ LGSRLL DD+ E E++A +LD LN+ R+ ME+ ML++AEA+ L +
Sbjct: 310 PRINAGGRIGDAALGSRLLTLDDTGEAEVIAQRLDELNRERQAMEAIMLQEAEAEALAEY 369
Query: 363 DDIQQASVIVVEGDRWHPGIVGLLAARLKEKFGRPSFAISFEEDGKGIGSGRSIEGFDIG 422
D + ASVIV ++WHPGIVGL+AARLKEKF RP+FAI+F+ G+G GSGRSI GFD+G
Sbjct: 370 GDGEGASVIVTAHEKWHPGIVGLIAARLKEKFKRPAFAIAFDPSGRGTGSGRSINGFDMG 429
Query: 423 KMVSFAVEEGILVKGGGHAMAAGLTVERVNFGRLCDFFQKFAHNIVPALITTPVFKIDGV 482
+MV AV+EG+LVKGGGHAMAAGLTVER + GRL FF + + V L+ KIDG
Sbjct: 430 RMVRAAVDEGLLVKGGGHAMAAGLTVERADLGRLRTFFTEKSARTVANLVANETLKIDGA 489
Query: 483 LNASAVNIALIDMLESAGPYGAGNPNPVFAFPNHKLQSIRVVNLAHLQMTFESQDSETLQ 542
+ AS + LID LE+AGPYG+G+ P+FA P H+++ R+V H+++T E+ D L
Sbjct: 490 IGASGATLELIDRLEAAGPYGSGHAQPLFAVPAHRVRDARLVGEKHVKVTMEAMDGSRLD 549
Query: 543 AIAFRVYGTPLGEFLMQSRGKRMHVTGHLCVNYWRGSKRCQLRVLDASPVE 593
IAFR T LG L+ SRG +HV G L +++G++R QLRV DA+P +
Sbjct: 550 GIAFRAADTALGNLLINSRGASLHVAGALGAEHYQGARRIQLRVCDAAPAK 600