RPSBLAST alignment for GI: 254780901 and conserved domain: COG1107
>gnl|CDD|31304 COG1107, COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]. Length = 715
Score = 49.9 bits (119), Expect = 2e-06
Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 25/160 (15%)
Query: 63 PSIRLLMPDPLILT----DCDKAARRIVQAIYNSEKIMIFGDYDVDG-AASVALMMRFL- 116
P+ + D +L D A+ I +A+ I+I D DG A VAL L
Sbjct: 310 PADVGFLVDSEVLEALKPDMVDVAKEIRRAVLEGRPIIIRHHADADGYCAGVALEKAILP 369
Query: 117 ----SHCSVNANMYIPDR---------IVDGYGPNPSLMEKFINEGAQ--LIITVDCGST 161
H +A ++ R + D +E G + L++ VD GST
Sbjct: 370 LIEDVHPDEDAEYHLFKRRPSKAPFYELEDVTRDLNFALEDAHRHGQKLPLLVLVDNGST 429
Query: 162 SYD--ALQYATNQGIDVIVIDHHQVKSEEIPAY--ALVNP 197
D A++ GID++V+DHH + Y VNP
Sbjct: 430 EEDIPAIKQLKAYGIDIVVVDHHYPDEAVVDEYVDVHVNP 469