RPSBLAST alignment for GI: 254780901 and conserved domain: COG1107

>gnl|CDD|31304 COG1107, COG1107, Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair]. Length = 715
 Score = 49.9 bits (119), Expect = 2e-06
 Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 25/160 (15%)

Query: 63  PSIRLLMPDPLILT----DCDKAARRIVQAIYNSEKIMIFGDYDVDG-AASVALMMRFL- 116
           P+    + D  +L     D    A+ I +A+     I+I    D DG  A VAL    L 
Sbjct: 310 PADVGFLVDSEVLEALKPDMVDVAKEIRRAVLEGRPIIIRHHADADGYCAGVALEKAILP 369

Query: 117 ----SHCSVNANMYIPDR---------IVDGYGPNPSLMEKFINEGAQ--LIITVDCGST 161
                H   +A  ++  R         + D        +E     G +  L++ VD GST
Sbjct: 370 LIEDVHPDEDAEYHLFKRRPSKAPFYELEDVTRDLNFALEDAHRHGQKLPLLVLVDNGST 429

Query: 162 SYD--ALQYATNQGIDVIVIDHHQVKSEEIPAY--ALVNP 197
             D  A++     GID++V+DHH      +  Y    VNP
Sbjct: 430 EEDIPAIKQLKAYGIDIVVVDHHYPDEAVVDEYVDVHVNP 469