HHsearch alignment for GI: 254780902 and conserved domain: COG0538

>COG0538 Icd Isocitrate dehydrogenases [Energy production and conversion].
Probab=100.00  E-value=0  Score=704.53  Aligned_cols=365  Identities=33%  Similarity=0.438  Sum_probs=329.2

Q ss_pred             CEEEECCCCCCHHHHHHHHHHHH----CCC---CCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf             67997598630899999999984----179---98448998274899865286277899999986593887264489854
Q gi|254780902|r    9 PVVSLDGDEMTRIIWQLIQENLI----HPY---LDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATITADQA   81 (412)
Q Consensus         9 ~Iv~l~GDgiG~Ei~~~~l~vl~----~~~---~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~tP~~~   81 (412)
T Consensus        20 iiP~IegDgiG~eit~~~~kvi~aav~k~Y~g~~~I~w~e~~aG~ka~d~tg~~lp~etl~aikky~VaiKgpl~TP---   96 (407)
T COG0538          20 IIPFIEGDGIGDEITRAIWKVIDAAVEKAYGGERKIEWKEVDAGEKARDKTGDQLPIETLEAIKKYGVAIKGPLTTP---   96 (407)
T ss_pred             CCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHCEEEECCCCCC---
T ss_conf             41358468775778999999999999863277622589998446178786467477999999998387731466676---


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEE-CCCCCCCCC-CCCCEEEEECCCCCCCCCCEEEECCCCEEEEEEECC
Q ss_conf             432112442211045898973296688305880-487877888-778679985056663001014777884599999548
Q gi|254780902|r   82 RVKEFNLKKMWKSPNGTIRNILGGIIFREPIIC-SNVPRLIPG-WKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGD  159 (412)
Q Consensus        82 ~~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~~~-~~~p~~~~~-~~~divivREnteg~Y~gie~~~~~~~~~~i~~~~~  159 (412)
T Consensus        97 ------vg~g~rSlNvtlRq~Ldly~~~rPv~y~~gvPspvk~pe~~dmVIfRenteDiYagiE~~~~s~~a~kl~~fl~  170 (407)
T COG0538          97 ------VGKGWRSLNVTLRQILDLYVFRRPVRYFPGVPSPVKRPEKVDMVIFRENTEDIYAGIEWKAGSPEALKLIFFLE  170 (407)
T ss_pred             ------CCCCCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHEEEECCCCCHHHHHHHHHH
T ss_conf             ------54451483199998728667632289238989888984437879984155362212440269920455664540


Q ss_pred             CCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC-CEEEEECHHHHHHHHHHHHHHHHHHHHHH------
Q ss_conf             88610255412466530101110514688999999999986599-89999742677751089999999998631------
Q gi|254780902|r  160 DGQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQL-PLYLSTKDTILKSYDGRFKNIFNEIFEAE------  232 (412)
Q Consensus       160 ~g~~~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~-kvt~v~KaNVlk~tdglf~~~~~eva~~~------  232 (412)
T Consensus       171 ~e~~--~~~i~~pe~~GIgikp~s~~~s~Rlvr~ai~yAi~~~r~~VtlvhKgnImK~teGaFkdw~yeva~~~ef~~~~  248 (407)
T COG0538         171 DEMG--VKKIRFPEDSGIGIKPISKEGSIRLVRAAIEYAIENKRKSVTLVHKGNIMKFTEGAFKDWGYEVAEEEEFGDEV  248 (407)
T ss_pred             CCCC--CCEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             3467--52486678870478843703159999999999997599538999458042211336778999986520034321


Q ss_pred             --CCCCCCCCC----EEHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECC
Q ss_conf             --002454232----0002436999999985496651-886321023267888877507532312431279875144212
Q gi|254780902|r  233 --FKNQFDELG----ITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEA  305 (412)
Q Consensus       233 --~~~~~~~~~----i~~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp  305 (412)
T Consensus       249 ~~~~~~~~~~~~~gkI~~~driaD~mlqQil~r~~eydViA~~NlnGDy~SDa~Aa~vGglGi~pgani~-~-~~~~fEA  326 (407)
T COG0538         249 VTGKEKFELKGPKGKIVYKDRIADDMLQQILLRPGEYDVIATKNLNGDYISDALAAQVGGLGLAPGANIG-D-GTAEFEA  326 (407)
T ss_pred             CCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEC-C-CEEEEEE
T ss_conf             1454545412777649984234899999996298774499963678647878999753876513531326-8-5599972


Q ss_pred             CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCE
Q ss_conf             22203455655424877554727999999999998630257303899999999999999987981632300157888713
Q gi|254780902|r  306 AHGTVTRHYRQHQQGKETSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLIGPEQDWL  385 (412)
Q Consensus       306 ~HGSAPd~~g~~iaGk~iA~NP~a~IlS~ammL~hlg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~~~~~~~~  385 (412)
T Consensus       327 ~HGTapk~-----aG~~~~-Np~a~Ils~~~ml~~~G-------w~eaa~li~~a~~~ti~~~~vT~Dlarl~~~~~~~v  393 (407)
T COG0538         327 THGTAPKY-----AGKDST-NPIASILSGTMMLRHRG-------WLEAADLIEKAVEDTIESGKVTYDLARLMGGAKRYL  393 (407)
T ss_pred             CCCCCCCC-----CCCCCC-CCHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHCCEEHHHHHHHCCCCCCC
T ss_conf             36765000-----676777-83899999999999853-------133388999999999981842088897608775510


Q ss_pred             EHHHHHHHHHHHHH
Q ss_conf             09999999999999
Q gi|254780902|r  386 STTDFIEKISDNLR  399 (412)
Q Consensus       386 ~T~ef~daI~~~l~  399 (412)
T Consensus       394 ~tsEF~d~ii~~l~  407 (407)
T COG0538         394 STSEFADAIIENLK  407 (407)
T ss_pred             CHHHHHHHHHHHCC
T ss_conf             08899999997529