HHsearch alignment for GI: 254780902 and conserved domain: COG0538
>COG0538 Icd Isocitrate dehydrogenases [Energy production and conversion].
Probab=100.00 E-value=0 Score=704.53 Aligned_cols=365 Identities=33% Similarity=0.438 Sum_probs=329.2
Q ss_pred CEEEECCCCCCHHHHHHHHHHHH----CCC---CCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 67997598630899999999984----179---98448998274899865286277899999986593887264489854
Q gi|254780902|r 9 PVVSLDGDEMTRIIWQLIQENLI----HPY---LDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATITADQA 81 (412)
Q Consensus 9 ~Iv~l~GDgiG~Ei~~~~l~vl~----~~~---~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~tP~~~ 81 (412)
T Consensus 20 iiP~IegDgiG~eit~~~~kvi~aav~k~Y~g~~~I~w~e~~aG~ka~d~tg~~lp~etl~aikky~VaiKgpl~TP--- 96 (407)
T COG0538 20 IIPFIEGDGIGDEITRAIWKVIDAAVEKAYGGERKIEWKEVDAGEKARDKTGDQLPIETLEAIKKYGVAIKGPLTTP--- 96 (407)
T ss_pred CCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHCCCCCHHHHHHHHHHCEEEECCCCCC---
T ss_conf 41358468775778999999999999863277622589998446178786467477999999998387731466676---
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEE-CCCCCCCCC-CCCCEEEEECCCCCCCCCCEEEECCCCEEEEEEECC
Q ss_conf 432112442211045898973296688305880-487877888-778679985056663001014777884599999548
Q gi|254780902|r 82 RVKEFNLKKMWKSPNGTIRNILGGIIFREPIIC-SNVPRLIPG-WKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGD 159 (412)
Q Consensus 82 ~~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~~~-~~~p~~~~~-~~~divivREnteg~Y~gie~~~~~~~~~~i~~~~~ 159 (412)
T Consensus 97 ------vg~g~rSlNvtlRq~Ldly~~~rPv~y~~gvPspvk~pe~~dmVIfRenteDiYagiE~~~~s~~a~kl~~fl~ 170 (407)
T COG0538 97 ------VGKGWRSLNVTLRQILDLYVFRRPVRYFPGVPSPVKRPEKVDMVIFRENTEDIYAGIEWKAGSPEALKLIFFLE 170 (407)
T ss_pred ------CCCCCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHEEEECCCCCHHHHHHHHHH
T ss_conf ------54451483199998728667632289238989888984437879984155362212440269920455664540
Q ss_pred CCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC-CEEEEECHHHHHHHHHHHHHHHHHHHHHH------
Q ss_conf 88610255412466530101110514688999999999986599-89999742677751089999999998631------
Q gi|254780902|r 160 DGQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQL-PLYLSTKDTILKSYDGRFKNIFNEIFEAE------ 232 (412)
Q Consensus 160 ~g~~~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~-kvt~v~KaNVlk~tdglf~~~~~eva~~~------ 232 (412)
T Consensus 171 ~e~~--~~~i~~pe~~GIgikp~s~~~s~Rlvr~ai~yAi~~~r~~VtlvhKgnImK~teGaFkdw~yeva~~~ef~~~~ 248 (407)
T COG0538 171 DEMG--VKKIRFPEDSGIGIKPISKEGSIRLVRAAIEYAIENKRKSVTLVHKGNIMKFTEGAFKDWGYEVAEEEEFGDEV 248 (407)
T ss_pred CCCC--CCEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 3467--52486678870478843703159999999999997599538999458042211336778999986520034321
Q ss_pred --CCCCCCCCC----EEHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECC
Q ss_conf --002454232----0002436999999985496651-886321023267888877507532312431279875144212
Q gi|254780902|r 233 --FKNQFDELG----ITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEA 305 (412)
Q Consensus 233 --~~~~~~~~~----i~~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp 305 (412)
T Consensus 249 ~~~~~~~~~~~~~gkI~~~driaD~mlqQil~r~~eydViA~~NlnGDy~SDa~Aa~vGglGi~pgani~-~-~~~~fEA 326 (407)
T COG0538 249 VTGKEKFELKGPKGKIVYKDRIADDMLQQILLRPGEYDVIATKNLNGDYISDALAAQVGGLGLAPGANIG-D-GTAEFEA 326 (407)
T ss_pred CCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEC-C-CEEEEEE
T ss_conf 1454545412777649984234899999996298774499963678647878999753876513531326-8-5599972
Q ss_pred CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCE
Q ss_conf 22203455655424877554727999999999998630257303899999999999999987981632300157888713
Q gi|254780902|r 306 AHGTVTRHYRQHQQGKETSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLIGPEQDWL 385 (412)
Q Consensus 306 ~HGSAPd~~g~~iaGk~iA~NP~a~IlS~ammL~hlg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~~~~~~~~ 385 (412)
T Consensus 327 ~HGTapk~-----aG~~~~-Np~a~Ils~~~ml~~~G-------w~eaa~li~~a~~~ti~~~~vT~Dlarl~~~~~~~v 393 (407)
T COG0538 327 THGTAPKY-----AGKDST-NPIASILSGTMMLRHRG-------WLEAADLIEKAVEDTIESGKVTYDLARLMGGAKRYL 393 (407)
T ss_pred CCCCCCCC-----CCCCCC-CCHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHCCEEHHHHHHHCCCCCCC
T ss_conf 36765000-----676777-83899999999999853-------133388999999999981842088897608775510
Q ss_pred EHHHHHHHHHHHHH
Q ss_conf 09999999999999
Q gi|254780902|r 386 STTDFIEKISDNLR 399 (412)
Q Consensus 386 ~T~ef~daI~~~l~ 399 (412)
T Consensus 394 ~tsEF~d~ii~~l~ 407 (407)
T COG0538 394 STSEFADAIIENLK 407 (407)
T ss_pred CHHHHHHHHHHHCC
T ss_conf 08899999997529