HHsearch alignment for GI: 254780902 and conserved domain: PRK00772
>PRK00772 3-isopropylmalate dehydrogenase; Provisional.
Probab=100.00 E-value=0 Score=765.20 Aligned_cols=337 Identities=20% Similarity=0.192 Sum_probs=299.4
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHCC----CCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 1386799759863089999999998417----998448998274899865286277899999986593887264489854
Q gi|254780902|r 6 VTKPVVSLDGDEMTRIIWQLIQENLIHP----YLDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATITADQA 81 (412)
Q Consensus 6 m~~~Iv~l~GDgiG~Ei~~~~l~vl~~~----~~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~tP~~~ 81 (412)
T Consensus 1 MtykI~vipGDGIGpEI~~aa~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~~t~~~~~~~daiL~Gavg~P~~~ 80 (352)
T PRK00772 1 MTYKIAVLPGDGIGPEVMAEAVKVLEAVAKKFGLEFEFEEALVGGAAIDAHGVPLPEETLEACKAADAVLLGAVGGPKWD 80 (352)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCCC
T ss_conf 96169997978635999999999999987740997799998547999997599488999999985595777356799888
Q ss_pred CCCCCCCCCCCCCH--HHHHHHHCCCEEEEEEE-EECCCCC--CCCC---CCCCEEEEECCCCCCCCCCEEEECCCCEEE
Q ss_conf 43211244221104--58989732966883058-8048787--7888---778679985056663001014777884599
Q gi|254780902|r 82 RVKEFNLKKMWKSP--NGTIRNILGGIIFREPI-ICSNVPR--LIPG---WKKPIIIGRHAFGDQYRATDFQFPSKGKLI 153 (412)
Q Consensus 82 ~~~~~~l~~~~~S~--n~~LR~~ldl~~~~rp~-~~~~~p~--~~~~---~~~divivREnteg~Y~gie~~~~~~~~~~ 153 (412)
T Consensus 81 ~~~~~-----~~~~~~ll~LRk~lDLyaNvRP~r~~~gv~~~~plk~~~~~~iD~vivRENTEg~Y~g~~~~~~~~---- 151 (352)
T PRK00772 81 NLPPE-----VRPERGLLPLRKELGLFANLRPAKLYPGLADASPLKPEIVAGLDILIVRELTGGIYFGQPKGREEE---- 151 (352)
T ss_pred CCCCC-----CCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCEECE----
T ss_conf 88988-----785487999999728748888862456666668887766688748999734566033788760033----
Q ss_pred EEEECCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99954888610255412466530101110514688999999999986599899997426777510899999999986310
Q gi|254780902|r 154 LKFVGDDGQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIFEAEF 233 (412)
Q Consensus 154 i~~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~kvt~v~KaNVlk~tdglf~~~~~eva~~~~ 233 (412)
T Consensus 152 ---------------------~a~~~~~iTr~~~eRi~r~Af~~A~~rrkkVt~vhKaNvmk~~~-lf~~~~~eva~~-- 207 (352)
T PRK00772 152 ---------------------RAFDTMVYTREEIERIARVAFELARKRRKKVTSVDKANVLESSQ-LWREVVTEVAKE-- 207 (352)
T ss_pred ---------------------EEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH-HHHHHHHHHHHH--
T ss_conf ---------------------99998885399999999999999985699469997664300479-999999998512--
Q ss_pred CCCCCCCCEEHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCHHH
Q ss_conf 024542320002436999999985496651-8863210232678888775075323124312798751442122220345
Q gi|254780902|r 234 KNQFDELGITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHGTVTR 312 (412)
Q Consensus 234 ~~~~~~~~i~~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp~HGSAPd 312 (412)
T Consensus 208 -----yp~I~~~~~~vDa~~~~Lv~~P~~fDViV~~NlfGDIlSDlaa~l~GglGlapsanig~~~-~a~FEp~HGSAPd 281 (352)
T PRK00772 208 -----YPDVELEHMYVDNAAMQLVRNPKQFDVIVTENLFGDILSDEAAMLTGSLGMLPSASLGESG-PGLYEPIHGSAPD 281 (352)
T ss_pred -----CCCCEEEEEEHHHHHHHHHCCHHHCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CEEECCCCCCCHH
T ss_conf -----6984588856669999972195755731246335678888998852764356533259987-6133345687344
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEHHHHH
Q ss_conf 5655424877554727999999999998-630257303899999999999999987981632300157888713099999
Q gi|254780902|r 313 HYRQHQQGKETSTNSIASIFAWTRGLLH-RAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLIGPEQDWLSTTDFI 391 (412)
Q Consensus 313 ~~g~~iaGk~iA~NP~a~IlS~ammL~h-lg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~~~~~~~~~T~ef~ 391 (412)
T Consensus 282 -----iAGk~iA-NP~a~ilS~amML~~~lg-------~~~~A~~I~~Av~~~l~~g~~T~Dl~----~~Gg~~~T~e~~ 344 (352)
T PRK00772 282 -----IAGKGIA-NPIATILSAAMMLRYSLG-------LEEAADAIEAAVEKVLAQGYRTADIA----EGGGKVSTSEMG 344 (352)
T ss_pred -----HCCCCCC-CCHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHCCCCCCCCC----CCCCCCCHHHHH
T ss_conf -----4699865-929999999999874559-------97999999999999997699277756----689862899999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780902|r 392 EKISDNL 398 (412)
Q Consensus 392 daI~~~l 398 (412)
T Consensus 345 ~avi~~l 351 (352)
T PRK00772 345 DAILAAL 351 (352)
T ss_pred HHHHHHH
T ss_conf 9999963