HHsearch results for GI: 254780902 and protein with PDBid: 1g2u_A
>1g2u_A IPMDH, 3-isopropylmalate dehydrogenase; beta-barrel, NAD binding, oxidoreductase; 2.10A {Thermus thermophilus HB8} SCOP: c.77.1.1 PDB: 1osj_A 1gc8_A 1xaa_A 1osi_A 1hex_A 1xab_A 2ztw_A* 1gc9_A 1ipd_A 1wal_A 1dpz_A 1dr0_A 1dr8_A 1idm_A 1xac_A 1xad_A
Probab=100.00 E-value=0 Score=694.55 Aligned_cols=331 Identities=18% Similarity=0.172 Sum_probs=293.2
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHC----CCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCC
Q ss_conf 679975986308999999999841----7998448998274899865286277899999986593887264489854432
Q gi|254780902|r 9 PVVSLDGDEMTRIIWQLIQENLIH----PYLDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATITADQARVK 84 (412)
Q Consensus 9 ~Iv~l~GDgiG~Ei~~~~l~vl~~----~~~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~tP~~~~~~ 84 (412)
+|++|||||||||||+++++||++ .+++++|+++++|.++++++|+++|+++++++++++++||||++||.|+..+
T Consensus 2 kIavipGDGIGpEv~~~~~~Vl~a~~~~~~~~ie~~~~~~G~~~~~~~G~~lp~~t~~~i~~~da~l~Ga~~~p~~~~~~ 81 (345)
T 1g2u_A 2 KVAVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEPTRKGVEEAEAVLLGSVGGPKWDGLP 81 (345)
T ss_dssp EEEEEEESTTHHHHHHHHHHHHHHHHHHHCCCCEEEECCCTHHHHHHHSSSSCHHHHHHHHHCSEEEEEECCCGGGTTSC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 89998878778999999999999999862998699999834412886599188999999997407660676798768888
Q ss_pred CCCCCCCCCCHHHHHHHHCCCEEEEEEEE-ECCCCCCCC-----CCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEEEC
Q ss_conf 11244221104589897329668830588-048787788-----877867998505666300101477788459999954
Q gi|254780902|r 85 EFNLKKMWKSPNGTIRNILGGIIFREPII-CSNVPRLIP-----GWKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVG 158 (412)
Q Consensus 85 ~~~l~~~~~S~n~~LR~~ldl~~~~rp~~-~~~~p~~~~-----~~~~divivREnteg~Y~gie~~~~~~~~~~i~~~~ 158 (412)
.. ....|.++.||+.||||+|+||+. +++++...+ ..++|++||||||||+|+|.++....+
T Consensus 82 ~~---~~~~~~~~~lR~~ldl~anvrp~~~~~~~~~~~p~~~~~~~~id~vivREnteg~Y~g~~~~~~~~--------- 149 (345)
T 1g2u_A 82 RK---IRPETGLLSLRKSQDLFANLRPAKVFPGLERLSPLKEEIARGVDVLIVRELTGGIYFGEPRGMSEA--------- 149 (345)
T ss_dssp GG---GCHHHHHHHHHHHTTEEEEEEEEECCTTCGGGSSSCHHHHTTCEEEEEEECSCSTTTCSSCEECSS---------
T ss_pred CC---CCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCCC---------
T ss_conf 55---575321366898725211244332147765468876566677406998745786205764221022---------
Q ss_pred CCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 88861025541246653010111051468899999999998659989999742677751089999999998631002454
Q gi|254780902|r 159 DDGQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIFEAEFKNQFD 238 (412)
Q Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~kvt~v~KaNVlk~tdglf~~~~~eva~~~~~~~~~ 238 (412)
.++.++.+|+.+++||+|+||+||++|+++||++||+||||.++ +|+++++|++++
T Consensus 150 ----------------~a~~~~~~tr~~~eRi~r~Af~~A~~~~k~Vt~v~KaNv~~~~~-~~~~~~~eva~~------- 205 (345)
T 1g2u_A 150 ----------------EAWNTERYSKPEVERVARVAFEVARKRRKHVVSVDKANVLEVGE-FWRKTVEEVGRG------- 205 (345)
T ss_dssp ----------------CEECCCCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHHHH-HHHHHHHHHHTT-------
T ss_pred ----------------CCCCEEEECHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH-HHHHHHHHHHCC-------
T ss_conf ----------------12561687399999999999999997599457752656555545-788999998542-------
Q ss_pred CCCEEHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHH
Q ss_conf 2320002436999999985496651-886321023267888877507532312431279875144212222034556554
Q gi|254780902|r 239 ELGITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHGTVTRHYRQH 317 (412)
Q Consensus 239 ~~~i~~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp~HGSAPd~~g~~ 317 (412)
||+|+++|++||+++||||++|++| ||||+|||||||||++|+++||+|++||+|+|++ ++||||+||||||
T Consensus 206 yp~i~~~~~~vD~~~~~lv~~P~~fdViv~~Nl~GDIlSDl~a~l~GglGl~~s~nig~~--~a~fEp~HGsApd----- 278 (345)
T 1g2u_A 206 YPDVALEHQYVDAMAMHLVRSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGRG--TPVFEPVHGSAPD----- 278 (345)
T ss_dssp CTTSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHTTTSCGGGCEEEEEESS--CCEEEESSCCCGG-----
T ss_pred CCCEEEEEHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCC--CCCCCCCCCCHHH-----
T ss_conf 897589850376999986128765785531416788999999986278666664203787--3312434564445-----
Q ss_pred HCCCCCCCCHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEHHHHHHHHHH
Q ss_conf 24877554727999999999998-63025730389999999999999998798163230015788871309999999999
Q gi|254780902|r 318 QQGKETSTNSIASIFAWTRGLLH-RAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLIGPEQDWLSTTDFIEKISD 396 (412)
Q Consensus 318 iaGk~iA~NP~a~IlS~ammL~h-lg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~~~~~~~~~T~ef~daI~~ 396 (412)
|||||+| ||+|||||++|||+| +| ++++|++|++||.++++++ +|+||| |.+||+||+|+|++
T Consensus 279 iaGk~ia-NP~a~Ils~ammL~~~lg-------~~~~a~~i~~Av~~~l~~~-~T~DlG-------G~a~T~e~~~aii~ 342 (345)
T 1g2u_A 279 IAGKGIA-NPTAAILSAAMMLEHAFG-------LVELARKVEDAVAKALLET-PPPDLG-------GSAGTEAFTATVLR 342 (345)
T ss_dssp GTTSSCC-CCHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHS-CCGGGT-------CCCCHHHHHHHHHH
T ss_pred CCCCCCC-CCHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHCC-CCCCCC-------CCCCHHHHHHHHHH
T ss_conf 0799864-969999999999974179-------8799999999999999648-996569-------99679999999999
Q ss_pred HH
Q ss_conf 99
Q gi|254780902|r 397 NL 398 (412)
Q Consensus 397 ~l 398 (412)
+|
T Consensus 343 ~l 344 (345)
T 1g2u_A 343 HL 344 (345)
T ss_dssp HC
T ss_pred HH
T ss_conf 64