HHsearch results for GI: 254780902 and protein with PDBid: 1v53_A
>1v53_A 3-isopropylmalate dehydrogenase; IPMDH, HOMO dimer, X-RAY analysis, oxidoreductase; 2.85A {Bacillus coagulans} SCOP: c.77.1.1 PDB: 2ayq_A 1v5b_A
Probab=100.00 E-value=0 Score=724.22 Aligned_cols=351 Identities=17% Similarity=0.171 Sum_probs=306.6
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHCC----CCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 1386799759863089999999998417----998448998274899865286277899999986593887264489854
Q gi|254780902|r 6 VTKPVVSLDGDEMTRIIWQLIQENLIHP----YLDIKIEYFDLSIQNRDLTDDQVTIDAAHAIKNCGVGIKCATITADQA 81 (412)
Q Consensus 6 m~~~Iv~l~GDgiG~Ei~~~~l~vl~~~----~~~i~~e~~d~G~~~~d~tg~~l~~da~eaik~~~v~lkg~~~tP~~~ 81 (412)
|+.+|++||||||||||++++++||.+. .++++|+++++|.++|+++|+++|+++++++++++++||||++||.+.
T Consensus 1 M~~kIavipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~et~~~i~~~da~l~Ga~~~p~~~ 80 (366)
T 1v53_A 1 MKMKLAVLPGDGIGPEVMDAAIRVLKTVLDNDGHEAVFENALIGGAAIDEAGTPLPEETLDICRRSDAILLGAVGGPKWD 80 (366)
T ss_dssp CCEEEEEEEESTTHHHHHHHHHHHHHHHHTTSSCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf 97159998978855999999999999998624997499999657999997599088999999996193699155688767
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE-EECCCCCC----C-CCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEE
Q ss_conf 4321124422110458989732966883058-80487877----8-8877867998505666300101477788459999
Q gi|254780902|r 82 RVKEFNLKKMWKSPNGTIRNILGGIIFREPI-ICSNVPRL----I-PGWKKPIIIGRHAFGDQYRATDFQFPSKGKLILK 155 (412)
Q Consensus 82 ~~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~-~~~~~p~~----~-~~~~~divivREnteg~Y~gie~~~~~~~~~~i~ 155 (412)
..+.. + ...++|++||+.||||+|+||+ .++++... . ...++|+|||||||||+|+|.++....+.
T Consensus 81 ~~~~~-~--~~~~~~~~LR~~ldlyanvRP~~~~~g~~~~sP~~~~~~~~iD~vIvREntEg~Y~g~~~~~~~~~----- 152 (366)
T 1v53_A 81 HNPAS-L--RPEKGLLGLRKEMGLFANLRPVKAYATLLNASPLKRERVENVDLVIVRELTGGLYFGRPSERRGPG----- 152 (366)
T ss_dssp SSCGG-G--CHHHHHHHHHHHHTCCEEEEEEECCGGGTTTSSBCHHHHTTCEEEEEEECSSBTTTCSCEEEESST-----
T ss_pred CCCCC-C--CCCCCHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC-----
T ss_conf 78987-4--742014889997187577755543205566899888888980299963068985657565026887-----
Q ss_pred EECCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 95488861025541246653010111051468899999999998659989999742677751089999999998631002
Q gi|254780902|r 156 FVGDDGQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIFEAEFKN 235 (412)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~kvt~v~KaNVlk~tdglf~~~~~eva~~~~~~ 235 (412)
...+..++++++..++|++|+||++|++|++|||++||+|||+ ++++|+++++|++++
T Consensus 153 -----------------~~~~~~~~~~t~~~~~riar~af~~A~~~~kkVt~v~K~nv~~-~~~l~~~~~~eva~~---- 210 (366)
T 1v53_A 153 -----------------ENEVVDTLAYTREEIERIIEKAFQLAQIRRKKLASVDKANVLE-SSRMWREIAEETAKK---- 210 (366)
T ss_dssp -----------------TCEEEEEEEEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTCH-HHHHHHHHHHHHHTT----
T ss_pred -----------------CEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEC-CCHHHHHHHHHHHHH----
T ss_conf -----------------6489987413389999999999999986799256742664011-333599999999826----
Q ss_pred CCCCCCEEHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCHHHHH
Q ss_conf 4542320002436999999985496651-886321023267888877507532312431279875144212222034556
Q gi|254780902|r 236 QFDELGITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHGTVTRHY 314 (412)
Q Consensus 236 ~~~~~~i~~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp~HGSAPd~~ 314 (412)
||+|++++++||++|||||++|++| ||||+|||||||||++|+++||+|++||+|++.++ ++||||+||||||
T Consensus 211 ---yp~i~~~~~~vD~~~~~lv~~P~~fdViv~~Nl~GDIlSD~~a~l~GglGl~~s~ni~~d~-~a~fEp~HGsApd-- 284 (366)
T 1v53_A 211 ---YPDVELSHMLVDSTSMQLIANPGQFDVIVTENMFGDILSDEASVITGSLGMLPSASLRSDR-FGMYEPVHGSAPD-- 284 (366)
T ss_dssp ---CTTSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHTTTTSCTTSCEEEEECSSS-CEEEEESSCCCGG--
T ss_pred ---CCCEEEEEEECHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCEECCCC-CEEECCCCCCHHH--
T ss_conf ---8977999987428899983186656645214068889999999862775546642656986-4686157786577--
Q ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEHHHHHHH
Q ss_conf 55424877554727999999999998-63025730389999999999999998798163230015788871309999999
Q gi|254780902|r 315 RQHQQGKETSTNSIASIFAWTRGLLH-RAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLIGPEQDWLSTTDFIEK 393 (412)
Q Consensus 315 g~~iaGk~iA~NP~a~IlS~ammL~h-lg~~~~~~~~~~~A~~i~~Av~~~l~~G~~T~DLg~~~~~~~~~~~T~ef~da 393 (412)
|||||+| ||+|||||++|||+| +| ++++|++|++||.+|+++|++|+||.. ...|.++|+||+||
T Consensus 285 ---iaGk~~a-NP~a~ilS~ammL~~~lg-------~~~~a~~i~~Av~~~l~~g~~T~Dl~~---~~gg~~~T~e~~~a 350 (366)
T 1v53_A 285 ---IAGQGKA-NPLGTVLSAALMLRYSFG-------LEKEAAAIEKAVDDVLQDGYCTGDLQV---ANGKVVSTIELTDR 350 (366)
T ss_dssp ---GTTSSCC-CCHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHTTEESSSSCC---TTCEECCHHHHHHH
T ss_pred ---HCCCCCC-CCHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHCCCCCCCCCC---CCCCCCCHHHHHHH
T ss_conf ---6699875-949999999999986379-------889999999999999985992646566---79970469999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999998730
Q gi|254780902|r 394 ISDNLRDALQKNL 406 (412)
Q Consensus 394 I~~~l~~~l~~~~ 406 (412)
|+++|++.+...+
T Consensus 351 vi~~l~~~~~~~~ 363 (366)
T 1v53_A 351 LIEKLNNSAAGPR 363 (366)
T ss_dssp HHHHCC-------
T ss_pred HHHHHHHCCCCCC
T ss_conf 9998740034673