HHsearch results for GI: 254780902 and protein with PDBid: 2d1c_A
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus HB8}
Probab=100.00 E-value=0 Score=743.54 Aligned_cols=338 Identities=21% Similarity=0.226 Sum_probs=305.9
Q ss_pred CCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH-HCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCC
Q ss_conf 386799759863089999999998417998448998274899865-2862778999999865938872644898544321
Q gi|254780902|r 7 TKPVVSLDGDEMTRIIWQLIQENLIHPYLDIKIEYFDLSIQNRDL-TDDQVTIDAAHAIKNCGVGIKCATITADQARVKE 85 (412)
Q Consensus 7 ~~~Iv~l~GDgiG~Ei~~~~l~vl~~~~~~i~~e~~d~G~~~~d~-tg~~l~~da~eaik~~~v~lkg~~~tP~~~~~~~ 85 (412)
+++|++|||||||||||++++++|.+...+++|+++++|.+.|.+ +|+++|++++++|++++++||||++||.+
T Consensus 19 r~~IaVipGDGIGPEV~~aalkVL~a~~~~i~~e~~~~G~~~y~~~~g~~lp~etl~~i~~~daiLkGpi~tP~~----- 93 (496)
T 2d1c_A 19 RKLITVIPGDGIGPECVEATLKVLEAAKAPLAYEVREAGASVFRRGIASGVPQETIESIRKTRVVLKGPLETPVG----- 93 (496)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCSHHHHTTTCTTSCCHHHHHHHHHHCEEEECCCCCCSS-----
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCCCC-----
T ss_conf 869999897750399999999999970998039999737998863368979899999998789899794568987-----
Q ss_pred CCCCCCCCCHHHHHHHHCCCEEEEEEE-EECCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCCCCE
Q ss_conf 124422110458989732966883058-8048787788877867998505666300101477788459999954888610
Q gi|254780902|r 86 FNLKKMWKSPNGTIRNILGGIIFREPI-ICSNVPRLIPGWKKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGDDGQTI 164 (412)
Q Consensus 86 ~~l~~~~~S~n~~LR~~ldl~~~~rp~-~~~~~p~~~~~~~~divivREnteg~Y~gie~~~~~~~~~~i~~~~~~g~~~ 164 (412)
.+++|+|++||+.||||+|+||+ .++++|.+.+.+++|+|||||||||+|+|+++....+....+
T Consensus 94 ----~~~~s~nl~LRk~LdLyaNvRPvk~~~g~~~~~~~~~iDivIVREntEGlY~g~e~~~~~~~a~~~---------- 159 (496)
T 2d1c_A 94 ----YGEKSANVTLRKLFETYANVRPVREFPNVPTPYAGRGIDLVVVRENVEDLYAGIEHMQTPSVAQTL---------- 159 (496)
T ss_dssp ----SSSCCHHHHHHHHTTCCEEEEEEECBTTBCCTTTTSCCEEEEEEECSSBGGGCCEEEEETTEEEEE----------
T ss_pred ----CCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCHHHEEE----------
T ss_conf ----687660478998569708853686568988744367888799833037854674223453230130----------
Q ss_pred EEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCC-CCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 25541246653010111051468899999999998659-98999974267775108999999999863100245423200
Q gi|254780902|r 165 EKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQ-LPLYLSTKDTILKSYDGRFKNIFNEIFEAEFKNQFDELGIT 243 (412)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~-~kvt~v~KaNVlk~tdglf~~~~~eva~~~~~~~~~~~~i~ 243 (412)
..+|+.+++||+|+||+||++|+ ++||++||+||||.|+|+|++++++++++ ||+|+
T Consensus 160 ---------------k~itr~~seRI~r~AFe~A~~~~rkkVt~v~KaNvmk~t~glf~~~~~eva~e-------yPdI~ 217 (496)
T 2d1c_A 160 ---------------KLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVAQE-------YPDIE 217 (496)
T ss_dssp ---------------EEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTCTTHHHHHHHHHHHHHTT-------CTTSE
T ss_pred ---------------CEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH-------CCCEE
T ss_conf ---------------11520114567789999998649983377513440112258999999999856-------79659
Q ss_pred HHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCC
Q ss_conf 02436999999985496651-88632102326788887750753231243127987514421222203455655424877
Q gi|254780902|r 244 YTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHGTVTRHYRQHQQGKE 322 (412)
Q Consensus 244 ~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGlapSanig~~~~~~mfEp~HGSAPd~~g~~iaGk~ 322 (412)
++|++||+++|||+++|++| ||||+|||||||||++|+++||+||+||+|+|++ ++||||+|||||| |||||
T Consensus 218 ~e~~~VD~~a~~Lv~~P~~FDVIVt~NlfGDILSDlaa~l~GslGlapSaniG~~--~amFEpvHGSAPd-----iAGk~ 290 (496)
T 2d1c_A 218 AVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNE--VAIFEAVHGSAPK-----YAGKN 290 (496)
T ss_dssp EEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHTTTTCGGGCEEEEECSS--CEEEEESSCCCTT-----TTTSS
T ss_pred EEECHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCC--CEEEECCCCCCHH-----HCCCC
T ss_conf 9855055899997319533776621421467888888875387434553201798--5577778887234-----37998
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHCCCCCCCCEEHHHHHHHHHHHHHHH
Q ss_conf 5547279999999999986302573038999999999999999879-816323001578887130999999999999999
Q gi|254780902|r 323 TSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVEDG-FMTKDLALLIGPEQDWLSTTDFIEKISDNLRDA 401 (412)
Q Consensus 323 iA~NP~a~IlS~ammL~hlg~~~~~~~~~~~A~~i~~Av~~~l~~G-~~T~DLg~~~~~~~~~~~T~ef~daI~~~l~~~ 401 (412)
+| ||+|||||++|||+|+|+ .++|++|++|+.+|+++| ++|+|||+. ...++|+||+|||+++|++.
T Consensus 291 iA-NP~a~IlSaamML~hlg~-------~~~A~~Ie~Av~~tl~~Gki~T~DlgG~----~~~a~T~ef~daIi~~l~k~ 358 (496)
T 2d1c_A 291 VI-NPTAVLLSAVMMLRYLEE-------FATADLIENALLYTLEEGRVLTGDVVGY----DRGAKTTEYTEAIIQNLGKT 358 (496)
T ss_dssp CC-CCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHTSSCBHHHHCT----TTCBCHHHHHHHHHHTTTCC
T ss_pred CC-CCHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHCCCCCCHHHCCC----CCCCCHHHHHHHHHHHHCCC
T ss_conf 75-919999999999998699-------7899999999999998598513220399----98773999999999986088
Q ss_pred HHH
Q ss_conf 987
Q gi|254780902|r 402 LQK 404 (412)
Q Consensus 402 l~~ 404 (412)
.++
T Consensus 359 p~~ 361 (496)
T 2d1c_A 359 PRK 361 (496)
T ss_dssp CSS
T ss_pred CCC
T ss_conf 333