HHsearch results for GI: 254780902 and protein with PDBid: 2d4v_A

>2d4v_A Isocitrate dehydrogenase; alpha and beta protein, isocitrate/isopropylmalate dehydrogenase-like fold, oxidoreductase; HET: FLC NAD; 1.90A {Acidithiobacillus thiooxidans}
Probab=100.00  E-value=0  Score=733.24  Aligned_cols=361  Identities=20%  Similarity=0.210  Sum_probs=308.7

Q ss_pred             CEEEECCCCCCHHHHHHHHHHHHCC-------CCCCEEEEEECCHHHHHHH--CCCCCHHHHHHHHHCCEEEECCCCCCC
Q ss_conf             6799759863089999999998417-------9984489982748998652--862778999999865938872644898
Q gi|254780902|r    9 PVVSLDGDEMTRIIWQLIQENLIHP-------YLDIKIEYFDLSIQNRDLT--DDQVTIDAAHAIKNCGVGIKCATITAD   79 (412)
Q Consensus         9 ~Iv~l~GDgiG~Ei~~~~l~vl~~~-------~~~i~~e~~d~G~~~~d~t--g~~l~~da~eaik~~~v~lkg~~~tP~   79 (412)
                      .|.+||||||||||++++++||++.       .++|+|.++++|.++++++  |+++|+++++++++++++||||+++|.
T Consensus        28 ~IavipGDGIGpEV~~~~~~Vl~~~~~~~~~~~~~i~~~~~~~G~~a~~~~g~g~~lP~et~~~~~~~dail~G~i~~p~  107 (429)
T 2d4v_A           28 IIPFIEGDGIGCDVTPAMRSVVDAAVAKVYGGQRQIAWMELFAGQKAVQLYGEGQYLPDETMAAIREYKVAIKGPLETPV  107 (429)
T ss_dssp             EEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECCTHHHHHHHCTTCSSCHHHHHHHHHHCEEEECCCCCCS
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHCCEEEECCCCCCC
T ss_conf             89997878320999999999999986675178764289997256877645188986989999999878999979877888


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE-EECCCCCCCCC-CCCCEEEEECCCCCCCCCCEEEECCCCEEEEE-E
Q ss_conf             544321124422110458989732966883058-80487877888-77867998505666300101477788459999-9
Q gi|254780902|r   80 QARVKEFNLKKMWKSPNGTIRNILGGIIFREPI-ICSNVPRLIPG-WKKPIIIGRHAFGDQYRATDFQFPSKGKLILK-F  156 (412)
Q Consensus        80 ~~~~~~~~l~~~~~S~n~~LR~~ldl~~~~rp~-~~~~~p~~~~~-~~~divivREnteg~Y~gie~~~~~~~~~~i~-~  156 (412)
                      +.         +.+|+|+.||+.||||+|+||+ .++++|.+... .++|+|||||||||+|+|.++....+....+. +
T Consensus       108 ~~---------~~~~~~l~LR~~ldLyanlRP~~~~~g~~~~~~~~~~iD~vIVREnteG~Y~g~~~~~~~~~~~~~~~~  178 (429)
T 2d4v_A          108 GG---------GIRSLNVAMRQDLDLYVCLRPVRYFEGTPSPMRHPEKVDMVIFRENSEDIYAGIEWPAGSPEAEKIIRF  178 (429)
T ss_dssp             SS---------SSCCHHHHHHHHTTCCEEEEEEECCTTCCCSBSCGGGCEEEEEEECSCGGGGCCEECTTCHHHHHHHHH
T ss_pred             CC---------CCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             88---------753566899986797465423336678887334756677799974676543551124677320012000


Q ss_pred             ECCCCCCEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC-CEEEEECHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             54888610255412466530101110514688999999999986599-89999742677751089999999998631002
Q gi|254780902|r  157 VGDDGQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQL-PLYLSTKDTILKSYDGRFKNIFNEIFEAEFKN  235 (412)
Q Consensus       157 ~~~~g~~~~~~~~~~~~~~~~~~~~~t~~~i~Riar~AF~~A~~~~~-kvt~v~KaNVlk~tdglf~~~~~eva~~~~~~  235 (412)
                      ..+   ...........+.++.++.+|+.+++|++|+||+||++|++ +||++||+|||+.++|+|++++++|+++||..
T Consensus       179 ~~~---~~~~~~~~~~~~~a~~~~v~t~~~~~Ri~r~Af~~A~~r~~k~vt~v~KaNvl~~s~glf~~~~~~va~~~~~~  255 (429)
T 2d4v_A          179 LRE---EMGVTKIRFPDSSAIGIKPVSTEGSERLIRRTIQYALEHGKPSVSLVHKGNIMKFTEGGFRDWGYALAEREFAG  255 (429)
T ss_dssp             HHH---TSCCCCCSCGGGEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTSTTTHHHHHHHHHHHHHHHSTT
T ss_pred             HHH---HCCCCEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             001---02520340798479999986117789999999999986599806888457623002006999999998876056


Q ss_pred             C--------------------------CCCCCEEHHHHHHHHHHHHHHCCCCCE-EEEECCCCCHHHHHHHHHHHCCCCC
Q ss_conf             4--------------------------542320002436999999985496651-8863210232678888775075323
Q gi|254780902|r  236 Q--------------------------FDELGITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGL  288 (412)
Q Consensus       236 ~--------------------------~~~~~i~~~~~~vD~~~~~lv~~P~~f-Vivt~NL~GDIlSD~aa~l~GglGl  288 (412)
                      +                          ..|++++++|+++||+|||||++|++| ||||+|||||||||++|+++|||||
T Consensus       256 ~~~~wr~~~~~~~~~~~~~~~~~e~~~~~~~~i~~~~~~vD~~a~~lv~~P~~FDVIv~~NlfGDILSDlaa~l~GslGl  335 (429)
T 2d4v_A          256 RVFTWRQKAAISKAEGKAAGQKAEQQAIADGKLIIKDVIADNFLQQILLRPEDYSVVATLNLNGDYVSDALAAEVGGIGM  335 (429)
T ss_dssp             TEEEHHHHHHHHHHHCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTTCGGG
T ss_pred             CCCCCCEEEEECCCCCCCCCCCCEECCCCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCC
T ss_conf             55331122110000243344320002446764587379999999998439301757741321447899999998604565


Q ss_pred             CEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             12431279875144212222034556554248775547279999999999986302573038999999999999999879
Q gi|254780902|r  289 MTSVLITADGKTMETEAAHGTVTRHYRQHQQGKETSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVEDG  368 (412)
Q Consensus       289 apSanig~~~~~~mfEp~HGSAPd~~g~~iaGk~iA~NP~a~IlS~ammL~hlg~~~~~~~~~~~A~~i~~Av~~~l~~G  368 (412)
                      +||+|||++  .+||||+||||||     |||||+| ||+|||||++|||+|+|       +.++|++|++||.+++++|
T Consensus       336 ~pSanig~~--~a~FEp~HGSAPd-----iaGk~iA-NP~A~IlS~amML~~lg-------~~~~A~~Ie~AV~~vl~~G  400 (429)
T 2d4v_A          336 APGANLSDT--HAIFEATHGTAPD-----IAGQGKA-NPSSLILSAVMMLEHLG-------WGEAAQAIVAAMNATIAAG  400 (429)
T ss_dssp             CCCEEECSS--CEEEECSCCCCTT-----TTTTTCC-CCHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCC--CEEEECCCCCCCC-----CCCCCCC-CCHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHCC
T ss_conf             641102898--7577779887523-----3799964-92999999999999879-------9889999999999999769


Q ss_pred             CCCHHHHHCCCCCCCCEEHHHHHHHHHHH
Q ss_conf             81632300157888713099999999999
Q gi|254780902|r  369 FMTKDLALLIGPEQDWLSTTDFIEKISDN  397 (412)
Q Consensus       369 ~~T~DLg~~~~~~~~~~~T~ef~daI~~~  397 (412)
                      ++|+|||+.. ++...+||+||+|||+++
T Consensus       401 ~~T~DLgg~~-~~~~~~sT~e~~~aIi~r  428 (429)
T 2d4v_A          401 EVTGDLAALR-GDVPALSTTEFTAALIRR  428 (429)
T ss_dssp             CEEHHHHTTC-TTCCEECHHHHHHHHHTT
T ss_pred             CCCCCCCCCC-CCCCCCCHHHHHHHHHHH
T ss_conf             9664557788-898876899999999951