PSIBLAST alignment of GI: 254780902 and protein with PDB id: 1a05
gi|3318965|pdb|1A05|A Chain A, Crystal Structure Of The Complex Of 3-Isopropylmalate Dehydrogenase From Thiobacillus Ferrooxidans With 3- Isopropylmalate Length = 358
>gi|3318966|pdb|1A05|B Chain B, Crystal Structure Of The Complex Of 3-Isopropylmalate Dehydrogenase From Thiobacillus Ferrooxidans With 3- Isopropylmalate Length = 358
Score = 242 bits (617), Expect = 9e-62, Method: Composition-based stats.
Identities = 71/410 (17%), Positives = 126/410 (30%), Gaps = 66/410 (16%)
Query: 1 MKKIKVTKPVVSLDGDEMTRIIWQLIQENLIH----PYLDIKIEYFDLSIQNRDLTDDQV 56
MKKI GD + I ++ L +L ++ + D +DD +
Sbjct: 1 MKKIA------IFAGDGIGPEIVAAARQVLDAVDQAAHLGLRCTEGLVGGAALDASDDPL 54
Query: 57 TIDAAHAIKNCGVGIKCATITADQARVKEFNLKKMWKSPNGTIRNILGGIIFREPIICSN 116
+ I A + +R L P
Sbjct: 55 PAASLQLAMAADAVILGAVGGPRWDAYPPAKRPEQGL---LRLRKGLDLYANLRPAQIFP 111
Query: 117 VPRLIPGW------KKPIIIGRHAFGDQYRATDFQFPSKGKLILKFVGDDGQTIEKEVFD 170
I++ R GD Y Q EV D
Sbjct: 112 QLLDASPLRPELVRDVDILVVRELTGDIYFG--------------------QPRGLEVID 151
Query: 171 SPGSGIAMAMYNLDDSIRNFARAAMQYALARQLPLYLSTKDTILKSYDGRFKNIFNEIFE 230
G M +D IR A A + A R+ L K +L++ ++ + E+
Sbjct: 152 GKRRG-FNTMVYDEDEIRRIAHVAFRAAQGRRKQLCSVDKANVLETT-RLWREVVTEVAR 209
Query: 231 AEFKNQFDELGITYTHRLIDDMVASSIKWSGGY-IWACKNYDGDVQSDIVAQGFGSLGLM 289
D + +H +D+ I+ + + N GD+ SD +Q GS+G++
Sbjct: 210 -------DYPDVRLSHMYVDNAAMQLIRAPAQFDVLLTGNMFGDILSDEASQLTGSIGML 262
Query: 290 TSVLITADGKTMETEAAHGTVTRHYRQHQQGKETSTNSIASIFAWTRGLLHRAKLDENAE 349
S + E HG+ G++ + N +A+I + L H +
Sbjct: 263 PSASLGEGR--AMYEPIHGSAPD-----IAGQDKA-NPLATILSVAMMLRHSLNAEP--- 311
Query: 350 LKKFAENLERVCIKTVEDGFMTKDLALLIGPEQDWLSTTDFIEKISDNLR 399
+A+ +E + ++ G T D+A P + T + + L
Sbjct: 312 ---WAQRVEAAVQRVLDQGLRTADIAA---PGTPVIGTKAMGAAVVNALN 355