RPSBLAST alignment of GI: 254780902 and protein with PDBid: 2d1c

>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus HB8} Length = 496

 Score = 94.7 bits (235), Expect = 4e-20
 Identities = 62/372 (16%), Positives = 111/372 (29%), Gaps = 61/372 (16%)

Query: 36  DIKIEYFDLSIQ-NRDLTDDQVTIDAAHAIKNCGVGIKCATITADQARVKEFNLKKMWKS 94
            +  E  +      R      V  +   +I+   V +K    T               KS
Sbjct: 48  PLAYEVREAGASVFRRGIASGVPQETIESIRKTRVVLKGPLETPV---------GYGEKS 98

Query: 95  PNGTIRNILGGIIFREPI-ICSNVPRLIPGWKKPIIIGRHAFGDQYRATDFQFPSKGKLI 153
            N T+R +        P+    NVP    G    +++ R    D Y              
Sbjct: 99  ANVTLRKLFETYANVRPVREFPNVPTPYAGRGIDLVVVRENVEDLYAG------------ 146

Query: 154 LKFVGDDGQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQLPLYLSTKDTI 213
                        E   +P     + + +   S +    A        +  ++ +TK  I
Sbjct: 147 ------------IEHMQTPSVAQTLKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNI 194

Query: 214 LKSYDGRFKNIFNEIFEAEFKNQFDELGITYTHRLIDDMVASSIKWSGGYIWACKNYDGD 273
           +K  +G  K  F ++   E+ +                +V    +     +    N +GD
Sbjct: 195 MKLAEGTLKRAFEQV-AQEYPDIE--AVHIIVDNAAHQLVK---RPEQFEVIVTTNMNGD 248

Query: 274 VQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHGTVTRHYRQHQQGKETSTNSIASIFA 333
           + SD+ +   G LG   S  I  +    E                 GK    N  A + +
Sbjct: 249 ILSDLTSGLIGGLGFAPSANIGNEVAIFEA-------VHGSAPKYAGK-NVINPTAVLLS 300

Query: 334 WTRGLLHRAKLDENAELKKFAENLERVCIKTVEDG-FMTKDLALLIGPEQDWLSTTDFIE 392
               L +  +           + +E   + T+E+G  +T D+            TT++ E
Sbjct: 301 AVMMLRYLEEFATA-------DLIENALLYTLEEGRVLTGDV----VGYDRGAKTTEYTE 349

Query: 393 KISDNLRDALQK 404
            I  NL    +K
Sbjct: 350 AIIQNLGKTPRK 361