RPSBLAST alignment of GI: 254780902 and protein with PDBid: 3dms

>3dms_A Isocitrate dehydrogenase [NADP]; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia pseudomallei} PDB: 1pb1_A* 1ai3_A* 1ika_A* 1ai2_A* 1p8f_A* 1pb3_A 1sjs_A 3icd_A 4icd_A* 5icd_A* 9icd_A* 1bl5_A* 1cw7_A* 1idd_A 1ide_A* 1hj6_A* 7icd_A 8icd_A* 6icd_A 1cw1_A* ... Length = 427

 Score =  177 bits (451), Expect = 3e-45
 Identities = 80/436 (18%), Positives = 147/436 (33%), Gaps = 67/436 (15%)

Query: 1   MKKIKVTK---------PVVSL---DG------DEMTRIIWQLIQENLIHPYLDIKIEYF 42
             KI V K         P++     DG        M +++     E        I     
Sbjct: 20  GDKITVNKDFSLNVSDQPIIPYIEGDGTGFDITPVMIKVV-DAAVEKAYGGKKKIHWMEI 78

Query: 43  DLSIQNRDLTDDQVTI--DAAHAIKNCGVGIKCATITADQARVKEFNLKKMWKSPNGTIR 100
               +   +    V +  +    +K   V IK    T               +S N  +R
Sbjct: 79  YAGEKATKVYGPDVWLPEETLQVLKEYVVSIKGPLTTPV---------GGGIRSLNVALR 129

Query: 101 NILGGIIFREPIIC-SNVPR-LIPGWKKPIIIGRHAFGDQYRATDFQFPS-KGKLILKFV 157
             L   +   PI     VP  +    K  ++I R    D Y   ++   S + K ++KF+
Sbjct: 130 QELDLYVCLRPIQYFKGVPSPVREPEKTNMVIFRENSEDIYAGIEWAAESEQAKKVIKFL 189

Query: 158 GDDGQTIEKEVFDSPGSGIAMAMYNLDDSIRNFARAAMQYALARQLP-LYLSTKDTILKS 216
            ++    +     + G GI        +      R A+QYA+      + L  K  I+K 
Sbjct: 190 QEEMGVKKIRFPQTSGIGI---KPVSKEGTERLVRKAIQYAIDNDRKSVTLVHKGNIMKF 246

Query: 217 YDGRFKNIFNEIFEAEFKNQFDELG-------------ITYTHRLIDDMVASSIKWSGGY 263
            +G F++    + + EF  +  + G             I     + D  +   +     Y
Sbjct: 247 TEGAFRDAGYALAQKEFGAELIDGGPWMKFKNPKTGNEIVVKDSIADAFLQQILLRPAEY 306

Query: 264 -IWACKNYDGDVQSDIVAQGFGSLGLMTSVLITADGKTMETEAAHGTVTRHYRQHQQGKE 322
            + A  N +GD  SD +A   G +G+     ++        EA HGT  ++  +      
Sbjct: 307 DVIATLNLNGDYISDALAAQVGGIGIAPGANLSDSV--AMFEATHGTAPKYAGKD----- 359

Query: 323 TSTNSIASIFAWTRGLLHRAKLDENAELKKFAENLERVCIKTVEDGFMTKDLALLIGPEQ 382
              N  + I +    L H           + A+ +     K+++   +T D A L+    
Sbjct: 360 -YVNPGSEILSAEMMLRHLG-------WTEAADVIISAMEKSIKQKRVTYDFARLMEGAT 411

Query: 383 DWLSTTDFIEKISDNL 398
             +S + F + + +N+
Sbjct: 412 Q-VSCSGFGQVLIENM 426