HHsearch alignment for GI: 254780903 and conserved domain: COG4191

>COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].
Probab=100.00  E-value=5.2e-43  Score=328.50  Aligned_cols=249  Identities=22%  Similarity=0.377  Sum_probs=213.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf             1788998644457999999999999999988789--99999998767522247899999999860346889938999999
Q gi|254780903|r  508 LSTSRQILERQKTELSIANAKYQVEKERAETANK--TKSEFLAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYA  585 (766)
Q Consensus       508 ~~~~~~~~~~~~~~L~~~~~~l~~~~~~ae~an~--~k~efla~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l  585 (766)
T Consensus       347 L~~~n~~l~~EIaer~~ae~~LR~~QdeLvQA~kLA~LGQmSA~iaHElNQPLaaiRt~adna~~-lLergr~e~a~~Nl  425 (603)
T COG4191         347 LTRANARLQAEIAEREQAEAALRRAQDELVQAGKLAALGQMSAGIAHELNQPLAAIRTYADNARL-LLERGRTEEARENL  425 (603)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHCCCHHHHHHHH
T ss_conf             88766888889998887899999878999987778998888888788743708999867778999-98758867777679


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECC-CCEEEECHHHHHHH
Q ss_conf             99999999999997776778887419830120331699999999999999998479589998089-97899868999999
Q gi|254780903|r  586 QDIHYSGQHLLNMINNILEMSKIETEKISIDKQNADLIPIINEGIRLIGSSAQSKNIKIEKKIPS-ELFFNADKRIIKKI  664 (766)
Q Consensus       586 ~~I~~~~~~l~~lI~diLd~srieag~~~~~~~~~dl~~~i~~~~~~~~~~~~~k~i~l~~~~~~-~l~v~~D~~~l~QV  664 (766)
T Consensus       426 ~~I~~LteRma~It~~Lk~FAr----k~~~a~~~v~l~~ai~~Al~ll~~R~~~~~~~l~~~~~~~~~~V~~~~iRLeQV  501 (603)
T COG4191         426 ERISALTERMAAITAHLKSFAR----KSRDAAGPVSLREAIEGALELLRGRLRAAGVELELDLPDAPLWVMANEIRLEQV  501 (603)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCHHHHHHH
T ss_conf             9999999999889999999833----676666776579999999999887641367626504898775564132209999


Q ss_pred             HHHHHHHHHHCC--CCCCEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHCCCEEECCCCCCCCCC-CCCHHHHHHHHHH
Q ss_conf             999886565346--8988899999997998999999788978977854304650531467556778-8761689999999
Q gi|254780903|r  665 LFPILSNSIKFT--NNNGKMMIRTSKIGQCVIITIADTGIGIPKSALEKIGQPFEPLHNQYDQSIG-GFGLGLAISDALT  741 (766)
Q Consensus       665 l~NLi~NAik~t--~~~g~I~i~~~~~~~~v~i~V~D~G~GI~~e~~~~iF~pF~q~~~~~t~~~~-GtGLGLaI~k~iV  741 (766)
T Consensus       502 LvNLl~NALDA~~~~~~~~i~i~~~~~~~~v~l~VrDnGpGi~~e~~~~lFePF~-----TtK~~~~GLGLGLaIS~~i~  576 (603)
T COG4191         502 LVNLLQNALDAMAGQEDRRLSIRAQREGGQVVLTVRDNGPGIAPEALPHLFEPFF-----TTKPVGKGLGLGLAISQNIA  576 (603)
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCC-----CCCCCCCCCCHHHHHHHHHH
T ss_conf             9999998999845887871699987159869999826999989789986137750-----36766677560289899899


Q ss_pred             HHCCCEEEEEEECCCCEEEEEECCC
Q ss_conf             9629869999798995299997359
Q gi|254780903|r  742 NLHGGRLKIISQEGKGTIVTICMPQ  766 (766)
Q Consensus       742 e~hgG~I~v~S~~g~Gttf~i~LP~  766 (766)
T Consensus       577 ~d~GGsL~v~n~~~~Ga~F~i~L~~  601 (603)
T COG4191         577 RDLGGSLEVANHPEGGASFTIELRR  601 (603)
T ss_pred             HHHCCEEEEECCCCCCEEEEEEEEC
T ss_conf             9818807940278884489999615