HHsearch alignment for GI: 254780903 and conserved domain: COG4585
>COG4585 Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=99.64 E-value=8.8e-13 Score=110.19 Aligned_cols=161 Identities=19% Similarity=0.301 Sum_probs=105.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCC-CEEE
Q ss_conf 938999999999999999999977767788874198301203316999999999999999984795899980899-7899
Q gi|254780903|r 577 GSVKYYEYAQDIHYSGQHLLNMINNILEMSKIETEKISIDKQNADLIPIINEGIRLIGSSAQSKNIKIEKKIPSE-LFFN 655 (766)
Q Consensus 577 ~~e~~~~~l~~I~~~~~~l~~lI~diLd~srieag~~~~~~~~~dl~~~i~~~~~~~~~~~~~k~i~l~~~~~~~-l~v~ 655 (766)
T Consensus 203 ~~e~~~~~l~~i~~~---~~e~l~evR~~v~------~Lrp~~l~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~ 273 (365)
T COG4585 203 DAEKAQEELKEIEKL---LREALQEVRALVR------DLRPVELEGLGLVEALRALLADFEERTGITVDLSLGSELERLP 273 (365)
T ss_pred CHHHHHHHHHHHHHH---HHHHHHHHHHHHH------HCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCC
T ss_conf 848899999999999---9999999999999------7197322121179999999999877508378861576446799
Q ss_pred -ECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHH
Q ss_conf -8689999999998865653468988899999997998999999788978977854304650531467556778876168
Q gi|254780903|r 656 -ADKRIIKKILFPILSNSIKFTNNNGKMMIRTSKIGQCVIITIADTGIGIPKSALEKIGQPFEPLHNQYDQSIGGFGLGL 734 (766)
Q Consensus 656 -~D~~~l~QVl~NLi~NAik~t~~~g~I~i~~~~~~~~v~i~V~D~G~GI~~e~~~~iF~pF~q~~~~~t~~~~GtGLGL 734 (766)
T Consensus 274 ~~~e~~l~rivQEaltN~~rHa~A-~~v~V~l~~~~~~l~l~V~DnG~Gf~~~~----------------~---~~~~GL 333 (365)
T COG4585 274 PEAEDALFRIVQEALTNAIRHAQA-TEVRVTLERTDDELRLEVIDNGVGFDPDK----------------E---GGGFGL 333 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCC-CEEEEEEEECCCEEEEEEEECCCCCCCCC----------------C---CCCCCH
T ss_conf 689999999999999899875784-56999999829889999998997889764----------------5---777667
Q ss_pred HHHHHHHHHCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 99999999629869999798995299997359
Q gi|254780903|r 735 AISDALTNLHGGRLKIISQEGKGTIVTICMPQ 766 (766)
Q Consensus 735 aI~k~iVe~hgG~I~v~S~~g~Gttf~i~LP~ 766 (766)
T Consensus 334 ~~mreRv~~lgG~l~i~S~~g~Gt~i~i~lPl 365 (365)
T COG4585 334 LGMRERVEALGGTLTIDSAPGQGTTVTITLPL 365 (365)
T ss_pred HHHHHHHHHCCCEEEEEECCCCCEEEEEEEEC
T ss_conf 66999999869989998559997799999509