HHsearch alignment for GI: 254780903 and conserved domain: COG5385
>COG5385 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=97.46 E-value=0.011 Score=37.33 Aligned_cols=193 Identities=13% Similarity=0.152 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHH
Q ss_conf 99987675222478999999998603468899389999999999999999999777677888741983012033169999
Q gi|254780903|r 546 FLAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYSGQHLLNMINNILEMSKIETEKISIDKQNADLIPI 625 (766)
Q Consensus 546 fla~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~~~~l~~lI~diLd~srieag~~~~~~~~~dl~~~ 625 (766)
T Consensus 18 LcsRvCHDiISPvgAInnGLeLLdeg~a-------ddDAm~LIrsSArnas----~rLqFaR~AFGAsgSag~~iDtgea 86 (214)
T COG5385 18 LCSRVCHDIISPVGAINNGLELLDEGGA-------DDDAMDLIRSSARNAS----VRLQFARLAFGASGSAGASIDTGEA 86 (214)
T ss_pred HHHHHHHHCCCCHHHHHCHHHHHCCCCC-------CHHHHHHHHHHHHHHH----HHHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf 9998875404817776032566426896-------4789999999765178----8877889872555543335660669
Q ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEECCC--C
Q ss_conf 99999999999984795899980899789986899999999988656534689888999999979989999997889--7
Q gi|254780903|r 626 INEGIRLIGSSAQSKNIKIEKKIPSELFFNADKRIIKKILFPILSNSIKFTNNNGKMMIRTSKIGQCVIITIADTGI--G 703 (766)
Q Consensus 626 i~~~~~~~~~~~~~k~i~l~~~~~~~l~v~~D~~~l~QVl~NLi~NAik~t~~~g~I~i~~~~~~~~v~i~V~D~G~--G 703 (766)
T Consensus 87 ek~A~~~~a---~ek-pe~~W~g~r~~---~~Kn~v-kllLNl~lia~~aiPrGG~~~vtle~~e~d~rfsi~akG~m~R 158 (214)
T COG5385 87 EKAAQDFFA---NEK-PELTWNGPRAI---LPKNRV-KLLLNLFLIAYGAIPRGGSLVVTLENPETDARFSIIAKGRMMR 158 (214)
T ss_pred HHHHHHHHH---CCC-CCCCCCCCHHH---CCCCHH-HHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCC
T ss_conf 999999986---238-71235587422---475058-9999999997055788982689953677674389983275344
Q ss_pred CCHHHHHHH-CCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECC
Q ss_conf 897785430-46505314675567788761689999999962986999979899529999735
Q gi|254780903|r 704 IPKSALEKI-GQPFEPLHNQYDQSIGGFGLGLAISDALTNLHGGRLKIISQEGKGTIVTICMP 765 (766)
Q Consensus 704 I~~e~~~~i-F~pF~q~~~~~t~~~~GtGLGLaI~k~iVe~hgG~I~v~S~~g~Gttf~i~LP 765 (766)
T Consensus 159 vppk~lel~~G~~~-------eE~vdahsVQpyYt~lLa~eAgm~I~v~~~~e-~iv~~A~v~ 213 (214)
T COG5385 159 VPPKFLELHSGEPP-------EEAVDAHSVQPYYTLLLAEEAGMTISVHATAE-RIVFTAWVV 213 (214)
T ss_pred CCHHHHHHHCCCCC-------CCCCCCCCCCHHHHHHHHHHCCCEEEEEECCC-EEEEEEECC
T ss_conf 79899865059984-------22478753039999999997098689996364-379997514