HHsearch alignment for GI: 254780903 and conserved domain: PRK10364
>PRK10364 sensor protein ZraS; Provisional.
Probab=95.80 E-value=0.15 Score=29.10 Aligned_cols=102 Identities=8% Similarity=0.093 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 25788765899999999999999999996768889998999999999999850100112235548999999999885310
Q gi|254780903|r 45 FSSFNQTIPMISMVFLVFIATSSIIKVTTRYAQQEKMTNQTSLMLTEAIEIIFQNNNIKFDLASQKKAESMLGQLLAKTR 124 (766)
Q Consensus 45 ~~~~rr~ip~~i~~fli~~~~~~~~~i~~~~~~~~~~~~~~~~lla~~~~~~~~~~~~~~d~~~~~~ae~~L~~~~~~~~ 124 (766)
T Consensus 12 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~g~~li~a~eag~r~g--m~~~~~-~~~~q~ll~e~a 85 (455)
T PRK10364 12 AKWLSAILPV---VIVGLVGLFAVTVIRDYGRETAAARQTLLEKGSVLIRALESGSRVG--MGMRMH-HAQQQALLEEMA 85 (455)
T ss_pred HHHHHHHHHH---HHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH--CCCCCH-HHHHHHHHHHHH
T ss_conf 9999999999---9999998871357510125899999999998899999987032021--552420-479999999971
Q ss_pred CCCC-CEEEEECCCCCEEEECCCHHHHCCCC
Q ss_conf 1789-78999969980899714205551997
Q gi|254780903|r 125 FLSE-SFILLAQPNELVFASSTKNSHYIGKK 154 (766)
Q Consensus 125 ~~~~-~~i~i~d~~g~i~~~n~~~~~~~G~~ 154 (766)
T Consensus 86 ~q~~v~~~~v~d~~g~i~~hs~~--~~~g~~ 114 (455)
T PRK10364 86 GQPGVLWFAVTDEQGTIIMHSNS--GMVGKQ 114 (455)
T ss_pred CCCCEEEEEEECCCCCEEEECCH--HHCCCC
T ss_conf 59986999998899638984785--644885