HHsearch alignment for GI: 254780903 and conserved domain: PRK10600
>PRK10600 nitrate/nitrite sensor protein NarX; Provisional.
Probab=99.75 E-value=1.4e-14 Score=123.23 Aligned_cols=193 Identities=12% Similarity=0.174 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECH
Q ss_conf 99999987675222478999999998603468899389999999999999999999777677888741983012033169
Q gi|254780903|r 543 KSEFLAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYSGQHLLNMINNILEMSKIETEKISIDKQNADL 622 (766)
Q Consensus 543 k~efla~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~~~~l~~lI~diLd~srieag~~~~~~~~~dl 622 (766)
T Consensus 362 R~~IARELHDslaQ~Ls~Lkiq~~~l~~~~--~~~~~~~~~~l~~i~~~~~~a~~~lReLl~~fR-----~~--l~~~~l 432 (569)
T PRK10600 362 RATIARELHDSIAQSLSCMKMQVSCLQMQG--DALPESSRELLSQIRNELNASWAQLRELLTTFR-----LQ--LTEPGL 432 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CC--CCCCCH
T ss_conf 999999988887222789999999999730--579888999999999999999999999999835-----57--775667
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEECCCC-EEEE-CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEEC
Q ss_conf 999999999999999847958999808997-8998-68999999999886565346898889999999799899999978
Q gi|254780903|r 623 IPIINEGIRLIGSSAQSKNIKIEKKIPSEL-FFNA-DKRIIKKILFPILSNSIKFTNNNGKMMIRTSKIGQCVIITIADT 700 (766)
Q Consensus 623 ~~~i~~~~~~~~~~~~~k~i~l~~~~~~~l-~v~~-D~~~l~QVl~NLi~NAik~t~~~g~I~i~~~~~~~~v~i~V~D~ 700 (766)
T Consensus 433 ~~aL~~~i~~~~~~~---g~~i~l~~~~~~~~l~~~~~i~l~rIvqEALsNv~KHA~A-~~v~V~l~~~~~~~~l~I~Dd 508 (569)
T PRK10600 433 RPALEASCEEFSARF---GFPVKLDYQLPPRLVPSHQAIHLLQIAREALSNALKHAQA-SEVVVTVAQNDNQVKLSVQDN 508 (569)
T ss_pred HHHHHHHHHHHHHHC---CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-CEEEEEEEECCCEEEEEEEEC
T ss_conf 999999999999760---9779999558866798789999999999999999970899-879999997699899999889
Q ss_pred CCCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 897897785430465053146755677887616899999999629869999798995299997359
Q gi|254780903|r 701 GIGIPKSALEKIGQPFEPLHNQYDQSIGGFGLGLAISDALTNLHGGRLKIISQEGKGTIVTICMPQ 766 (766)
Q Consensus 701 G~GI~~e~~~~iF~pF~q~~~~~t~~~~GtGLGLaI~k~iVe~hgG~I~v~S~~g~Gttf~i~LP~ 766 (766)
T Consensus 509 G~Gf~~~------------------~~~~~h~GL~iMrERa~~lgG~l~i~s~p~~GT~V~l~f~P 556 (569)
T PRK10600 509 GCGVPEN------------------AERSNHYGLIIMRDRAQSLRGDCSVRRRESGGTEVVVTFIP 556 (569)
T ss_pred CCCCCCC------------------CCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECC
T ss_conf 9898988------------------88899978159999999769989998669995899999758