HHsearch alignment for GI: 254780903 and conserved domain: PRK10815
>PRK10815 sensor protein PhoQ; Provisional.
Probab=100.00 E-value=0 Score=352.41 Aligned_cols=234 Identities=17% Similarity=0.238 Sum_probs=205.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998878999999998767522247899999999860346889938999999999999999999977
Q gi|254780903|r 521 ELSIANAKYQVEKERAETANKTKSEFLAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYSGQHLLNMIN 600 (766)
Q Consensus 521 ~L~~~~~~l~~~~~~ae~an~~k~efla~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~~~~l~~lI~ 600 (766)
T Consensus 244 Ei~~La~~fN~ml~rl~~~~~rqr~F~adaSHELRTPLa~l~~~le~L~~~~---~~~~---~~~~~~le~i~Rl~~li~ 317 (484)
T PRK10815 244 ELTSLVRNLNRLLKSERERYDKYRTTLTDLTHSLKTPLAVLQSTLRSLRTEK---MSVS---DAEPVMLEQISRISQQIG 317 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCC---CCHH---HHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999985443643456999999999974699---8878---999999999999999999
Q ss_pred HHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 76778887419830120331699999999999999998479589998089978998689999999998865653468988
Q gi|254780903|r 601 NILEMSKIETEKISIDKQNADLIPIINEGIRLIGSSAQSKNIKIEKKIPSELFFNADKRIIKKILFPILSNSIKFTNNNG 680 (766)
Q Consensus 601 diLd~srieag~~~~~~~~~dl~~~i~~~~~~~~~~~~~k~i~l~~~~~~~l~v~~D~~~l~QVl~NLi~NAik~t~~~g 680 (766)
T Consensus 318 ~lL~~a~~~~~~~~~~~e~~~l~~ll~~l~~~l~~~~~~k~i~l~~~~~~~~~~~gd~~~l~~~l~NLldNAikys~~~- 396 (484)
T PRK10815 318 YYLHRASMRGEGTLLSRELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFMEVMGNVLDNACKYCLEF- 396 (484)
T ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHCCCC-
T ss_conf 9999987038986302555669999999999999999964977999648760795578999999999999999728886-
Q ss_pred EEEEEEEEECCEEEEEEEECCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEE
Q ss_conf 89999999799899999978897897785430465053146755677887616899999999629869999798995299
Q gi|254780903|r 681 KMMIRTSKIGQCVIITIADTGIGIPKSALEKIGQPFEPLHNQYDQSIGGFGLGLAISDALTNLHGGRLKIISQEGKGTIV 760 (766)
Q Consensus 681 ~I~i~~~~~~~~v~i~V~D~G~GI~~e~~~~iF~pF~q~~~~~t~~~~GtGLGLaI~k~iVe~hgG~I~v~S~~g~Gttf 760 (766)
T Consensus 397 -v~I~~~~~~~~~~I~V~D~GpGIp~e~~~~IFeRF~R~d~~----r~GsGLGLaIvk~Iv~~hgG~I~l~~s~~gG~~f 471 (484)
T PRK10815 397 -VEISARQTDEHLHIVVEDDGPGIPESKRELIFDRGQRVDTL----RPGQGVGLAVAREITEQYEGKIVASESPLGGARM 471 (484)
T ss_pred -EEEEEEEECCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCC----CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEE
T ss_conf -79999996999999999739999989998624688779999----9985767999999999889989999569992489
Q ss_pred EEECCC
Q ss_conf 997359
Q gi|254780903|r 761 TICMPQ 766 (766)
Q Consensus 761 ~i~LP~ 766 (766)
T Consensus 472 ~I~F~~ 477 (484)
T PRK10815 472 EVIFGR 477 (484)
T ss_pred EEEECC
T ss_conf 999738