HHsearch alignment for GI: 254780903 and conserved domain: PRK10820
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional.
Probab=97.68 E-value=0.0032 Score=41.22 Aligned_cols=109 Identities=10% Similarity=0.079 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCEEEECHHHHHHCCCCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 99999999972259745989768978999788997729994330589889997608120589999999972489848999
Q gi|254780903|r 252 EANICVETALSRGRCGLWNFNFDNKKFHLSRSMYEIMGIPYENKTLSFRAIARLIHYDNKKICEIARSVTGKHVKQLDQI 331 (766)
Q Consensus 252 ese~rl~~al~~a~~GiWd~D~~~~~i~ws~~~~~llG~~~~e~~~s~~~~~~~vHPdDr~~~~~a~~~~~~~~~~~~~e 331 (766)
T Consensus 77 r~~~~L~alLdsl~dgV~svD~~G~I~~~N~aa~~i~~~~~~~~~G~--~i~~~~~~~~~~~~-----l~~~~~~~--~~ 147 (513)
T PRK10820 77 REHLALSALLEALPEPVLSIDMKSKVELANPASCQLFGQSEERLRNH--TAAQLINGFNFLRW-----LESEPQDS--HN 147 (513)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCEEEEHHHHHHHHCCCHHHHCCC--CHHHHCCCCCHHHH-----HHCCCCCC--CC
T ss_conf 68889999997389978998599819976399999849896887797--99997187569999-----86289876--63
Q ss_pred EEEECCCCCEEEEEEEEEEEEECCCEEEEEEE---EECCCHH
Q ss_conf 99886989889988999999837960699999---8446179
Q gi|254780903|r 332 FHMRHASGADIWIQVRAQMMRTISGGMNIIGI---AMDLTEK 370 (766)
Q Consensus 332 ~Ri~~~DG~~~Wi~~r~~~i~d~~G~~~~iGi---~~DITEr 370 (766)
T Consensus 148 ~~~~-~~~~~~~~~~~pi~~~~~~~~~~~~GaV~~lk~~~~~ 188 (513)
T PRK10820 148 EHVV-INGQNFLMEITPVYLQDENDQHVLTGAVVMLRSTIRM 188 (513)
T ss_pred EEEE-ECCCEEEEEEEEEEECCCCCCCEEEEEEEEECCHHHH
T ss_conf 5998-7696789997678752778860366689882468999